JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10000:11208_CL1Contig1-B:fNM_005710, NM_001032382, NM_001032384, NM_001032383, NM_001032381, NM_001032385Homo sapiens polyglutamine binding protein 1 (PQBP1), transcript variant 1, mRNAXM_881492PREDICTED: Bos taurus similar to polyglutamine binding protein 1 isoform 1, transcript variant 2 (LOC534894), mRNA4e-33btcn27546, btcn27547, BM106632, btcn27548, AV597043, btcn27544, btcn27549 Bt.13598.2.S1_at Bt.13598.2.S1_at, Bt.13598.1.S1_at Bt.13598.1.S1_at (206 bases away) Bt.13598.2.S1_at, Bt.13598.1.S1_at Bt.13598.1.S1_at (190 bases away) Bt.13598.2.S1_at, Bt.13598.1.S1_at Bt.13598.2.S1_at
10001:5026_CL1Contig1-B:fNM_005834Homo sapiens translocase of inner mitochondrial membrane 17 homolog B (yeast) (TIMM17B), mRNAXM_868318PREDICTED: Bos taurus similar to Mitochondrial import inner membrane translocase subunit Tim17 B (JM3), transcript variant 2 (LOC540765), mRNA4e-33DV803068, btcn27555, btcn27554 Bt.17548.1.S1_at Bt.17548.1.S1_at Bt.17548.1.S1_at
10002:30661_CL1Contig1-B:fNM_013271 (389 bases away)Homo sapiens proprotein convertase subtilisin/kexin type 1 inhibitor (PCSK1N), mRNAXM_591308PREDICTED: Bos taurus similar to proprotein convertase subtilisin/kexin type 1 inhibitor precursor (LOC513603), mRNA4e-33DV833794, btcn27556 Bt.11657.1.A1_at Bt.11657.1.A1_at
10003:12848_CL1Contig1-A:rNM_181532Homo sapiens ES cell expressed Ras (ERAS), mRNAXM_591307PREDICTED: Bos taurus similar to small GTPase protein E-Ras (LOC540065), mRNA4e-33btcn27559 Bt.21077.1.S1_at
10004:11669_CL4Contig2-B:rNM_006044Homo sapiens histone deacetylase 6 (HDAC6), mRNAXM_591306PREDICTED: Bos taurus similar to Histone deacetylase 6 (HD6) (LOC513602), mRNA4e-33btcn27561, btcn27560 Bt.5092.2.A1_at Bt.5092.2.A1_at
10005:43778_CL2Contig1-B:fNM_002049Homo sapiens GATA binding protein 1 (globin transcription factor 1) (GATA1), mRNAXM_594202PREDICTED: Bos taurus similar to Erythroid transcription factor (GATA-binding factor 1) (GATA-1) (Eryf1) (GF-1) (NF-E1), transcript variant 1 (LOC516066), mRNA4e-33btcn27550, btcn27551 Bt.24556.1.S1_at Bt.24556.1.S1_at
10006:45360_CL9Contig1-B:rNM_006986, NM_001005333, NM_001005332Homo sapiens melanoma antigen family D, 1 (MAGED1), transcript variant 2, mRNAXM_590101PREDICTED: Bos taurus similar to melanoma antigen family D, 1 isoform b (LOC512562), mRNA4e-33btcn51465, DN533823 Bt.5519.2.S1_at Bt.5519.2.S1_at
10007:32575_CL10Contig1-B:rXM_612760PREDICTED: Bos taurus similar to faciogenital dysplasia protein (LOC540713), mRNA4e-33
10008:9720_CL1Contig1-B:fXM_612760PREDICTED: Bos taurus similar to faciogenital dysplasia protein (LOC540713), mRNA4e-33
10009:3147_49425615-A:fNM_080737Homo sapiens synaptotagmin-like 4 (granuphilin-a) (SYTL4), mRNAAJ692196 Bt.13365.2.S1_at (336 bases away)
1000:8333_29265212-A:rNM_016013Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 (NDUFAF1), mRNAXM_615202PREDICTED: Bos taurus similar to Complex I intermediate-associated protein 30, mitochondrial precursor (LOC541232), mRNA4e-33btcn15078 Bt.25412.1.A1_at (593 bases away)
10010:13638_CL1Contig1-B:fNM_019067Homo sapiens guanine nucleotide binding protein-like 3 (nucleolar)-like (GNL3L), mRNADN532939, DT899724, btcn35820, btcn35819, btcn35818, BM445420, btcn1439 Bt.2898.2.S1_a_at Bt.2898.2.S1_a_at, Bt.2898.3.S1_at Bt.2898.2.S1_a_at Bt.2898.2.S1_a_at Bt.2898.2.S1_a_at, Bt.2898.3.S1_at Bt.2898.2.S1_a_at Bt.2898.2.S1_a_at
10011:15066_CL5Contig2-B:rNM_031407Homo sapiens HECT, UBA and WWE domain containing 1 (HUWE1), mRNAXM_872770PREDICTED: Bos taurus similar to HECT, UBA and WWE domain containing 1, transcript variant 14 (LOC511826), mRNA4e-33btcn12580, DN273566 Bt.9236.1.S1_at, Bt.21173.1.S1_at Bt.9236.1.S1_at, Bt.21173.1.S1_at
10012:10538_CL4Contig1-B:rNM_002444Homo sapiens moesin (MSN), mRNAXM_593965PREDICTED: Bos taurus similar to Moesin (Membrane-organizing extension spike protein) (LOC540426), partial mRNA4e-33btcn30613 Bt.9207.1.S1_at
10013:67_9715215-A:fXM_864241PREDICTED: Bos taurus similar to Spindlin-like protein 2 (SPIN-2) (LOC613454), mRNA4e-33
10015:67_CL1Contig1-A:rNM_001006683, NM_019003, NM_001006681Homo sapiens spindlin family, member 2 (SPIN2), mRNAXM_582899PREDICTED: Bos taurus similar to spindlin-like (LOC506451), mRNA4e-33btcn52839 Bt.25214.1.A1_at
10018:21664_CL1Contig1-A:fNM_001356, NM_004660Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), mRNAbtcn41116, DV780942 Bt.9783.1.S1_at Bt.9783.1.S1_at (362 bases away)
1001:25300_10027844-A:fXM_604734PREDICTED: Bos taurus similar to cytosolic phospholipase A2 epsilon (LOC526364), partial mRNA1e-30
10020:25933_CL3Contig1-B:fNM_001356, NM_004660Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), mRNAXM_873458PREDICTED: Bos taurus similar to DEAD-box protein 3, X-chromosomal (Helicase-like protein 2) (HLP2) (DEAD-box, X isoform), transcript variant 6 (LOC510093), mRNA5e-14btcn41116, DV789376 Bt.9783.1.S1_at Bt.9783.1.S1_at (850 bases away)
10021:3196_CL1Contig4-B:fNM_001039591, NM_001039590, NM_004654Homo sapiens ubiquitin specific peptidase 9, Y-linked (fat facets-like, Drosophila) (USP9Y), mRNAXM_873842PREDICTED: Bos taurus similar to ubiquitin specific protease 9, X-linked isoform 1, transcript variant 3 (LOC507307), mRNA4e-33btcn41120, btcn41123, btcn41119 Bt.22091.1.S1_at Bt.22091.1.S1_at Bt.22091.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10023:45360_CL608Contig1-B:rNM_001039891 (3224 bases away)Homo sapiens zinc finger protein 674 (ZNF674), mRNAXM_864738PREDICTED: Bos taurus similar to zinc finger protein 21 isoform 1, transcript variant 3 (LOC514769), mRNA4e-33btcn41124 (3132 bases away)
10024:2965_CL2Contig1-B:rNM_000240Homo sapiens monoamine oxidase A (MAOA), nuclear gene encoding mitochondrial protein, mRNANM_181014Bos taurus monoamine oxidase A (MAOA), mRNA4e-33btcn45305 Bt.17084.1.S1_at, Bt.9379.1.S1_at
10025:2965_CL1Contig2-A:rNM_000898Homo sapiens monoamine oxidase B (MAOB), nuclear gene encoding mitochondrial protein, mRNANM_177944Bos taurus monoamine oxidase B (MAOB), mRNA4e-33DV793450, btcn45304, BM258034, btcn45303 Bt.22460.1.S1_at (6341 bases away) Bt.22460.1.S2_at, Bt.22460.1.S1_at Bt.22460.1.S1_at (15750 bases away) Bt.22460.1.S2_at, Bt.22460.1.S1_at
10026:24269_CL3Contig1-A:fXM_874706PREDICTED: Bos taurus similar to ubiquilin 1 isoform 1, transcript variant 7 (LOC539529), mRNA2e-32
10027:37260_CL1Contig1-B:fbtcn2338, btcn2337 Bt.6921.1.S1_at Bt.6921.1.S1_at
10028:45110_18108063-B:fNM_007268Homo sapiens V-set and immunoglobulin domain containing 4 (VSIG4), mRNAXM_865690PREDICTED: Bos taurus similar to V-set and immunoglobulin domain containing protein 4 precursor (Z39Ig protein) (LOC614262), partial mRNA4e-33btcn21875, DV779551, btcn19438 Bt.15731.1.A1_at Bt.15731.1.A1_at Bt.15731.1.A1_at (365 bases away)
10029:18267_CL1Contig1-B:fNM_031206Homo sapiens LAS1-like (S. cerevisiae) (LAS1L), mRNAXM_584623PREDICTED: Bos taurus similar to LAS1-like (LOC507924), partial mRNA4e-33btcn21795, btcn54315 Bt.2274.1.A1_at Bt.2274.1.A1_at
1002:13292_CL2Contig2-A:rNM_139265Homo sapiens EH-domain containing 4 (EHD4), mRNAXM_581459PREDICTED: Bos taurus similar to EH-domain containing 4, transcript variant 1 (LOC505206), mRNA4e-33btcn53423, btcn53422, DT721046 Bt.9037.1.S1_at, Bt.2096.1.S1_at Bt.2096.2.S1_at, Bt.2096.1.S1_at Bt.2096.1.S1_at
10030:18267_CL1Contig2-A:fNM_031206Homo sapiens LAS1-like (S. cerevisiae) (LAS1L), mRNAXM_865791PREDICTED: Bos taurus similar to LAS1-like (LOC614330), mRNA4e-33btcn21795, btcn54315 Bt.2274.1.A1_at Bt.2274.1.A1_at
10031:18612_CL1Contig2-A:rNM_000266Homo sapiens Norrie disease (pseudoglioma) (NDP), mRNAXM_874953PREDICTED: Bos taurus similar to norrin, transcript variant 3 (LOC511596), mRNA4e-33DN511669, btcn9577, CR851176, btcn9574 Bt.3307.1.A1_at Bt.3307.1.A1_at Bt.3307.1.A1_at Bt.3307.1.A1_at
10032:7213_CL1Contig1-B:fNM_006307Homo sapiens sushi-repeat-containing protein, X-linked (SRPX), mRNANM_001040489Bos taurus sushi repeat-containing protein (ext1), mRNA1e-30btcn29211, BE123846, btcn9130 Bt.2046.1.S1_at Bt.2046.1.S1_at Bt.2046.1.S1_at
10033:7213_45484909-A:rNM_000328 (89492 bases away)Homo sapiens retinitis pigmentosa GTPase regulator (RPGR), transcript variant A, mRNAbtcn29214 Bt.10928.1.A1_at
10034:20498_47681792-A:fNM_003688, NM_080817Homo sapiens calcium/calmodulin-dependent serine protein kinase (MAGUK family) (CASK), mRNAbtcn48292, btcn48288 Bt.18895.1.A1_at (20100 bases away) Bt.18895.1.A1_at
10035:4278_CL1Contig1-B:fNM_004447Homo sapiens epidermal growth factor receptor pathway substrate 8 (EPS8), mRNAXM_618624PREDICTED: Bos taurus similar to Epidermal growth factor receptor kinase substrate 8 (LOC538419), mRNA4e-33DV798598, btcn48289 Bt.23558.1.S1_at Bt.12691.1.A1_at, Bt.23558.1.S1_at
10036:37975_58768791-A:rNM_030669, NM_030670, NM_030671, NM_002848, NM_030668, NM_030667Homo sapiens protein tyrosine phosphatase, receptor type, O (PTPRO), transcript variant 2, mRNAbtcn48290 Bt.12691.1.A1_at (18009 bases away)
10038:3561_CL1Contig1-B:rNM_000397Homo sapiens cytochrome b-245, beta polypeptide (chronic granulomatous disease) (CYBB), mRNANM_174035Bos taurus cytochrome b-245, beta polypeptide (CYBB), mRNA4e-33btcn16228 Bt.4558.1.S1_at
10039:9382_51825694-A:fNM_198511Homo sapiens LanC lantibiotic synthetase component C-like 3 (bacterial) (LANCL3), mRNAXM_597454PREDICTED: Bos taurus similar to LanC lantibiotic synthetase component C-like 3 (LOC519239), mRNA4e-33CO895380 Bt.13571.1.S1_at (47502 bases away)
10040:1452_CL1Contig1-A:fNM_004018 (364001 bases away)Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp71ab, mRNABE685026, btcn12624 Bt.25690.1.S1_at Bt.25690.1.S1_at
10041:12477_CL33Contig1-B:fNM_004011, NM_004006, NM_004022, NM_004012, NM_004021, NM_004023, NM_004007, NM_000109, NM_004014, NM_004020, NM_004009, NM_004010, NM_004013Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp427c, mRNAXM_612974PREDICTED: Bos taurus similar to dystrophin Dp140b isoform (LOC540755), partial mRNA4e-33btcn7015.1, DN516212 Bt.19829.1.A1_at Bt.19829.1.A1_at
10043:15591_10168367-A:fNM_001013628, NM_178470Homo sapiens WD repeat domain 40B (WDR40B), mRNAXM_866295PREDICTED: Bos taurus similar to WD repeat domain 40B-like (LOC614708), mRNA1e-11btcn13344 Bt.25723.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10044:8634_11697692-A:fNM_139058Homo sapiens aristaless related homeobox (ARX), mRNAXM_607652PREDICTED: Bos taurus similar to aristaless related homeobox gene (LOC529211), mRNA4e-33BF600400 Bt.20817.1.A1_at (16333 bases away)
10045:43159_CL1Contig1-A:fNM_016937Homo sapiens polymerase (DNA directed), alpha (POLA), mRNAbtcn5474 Bt.20817.2.S1_at, Bt.20817.1.A1_at
10046:5857_CL1Contig1-B:rNM_024122Homo sapiens family with sequence similarity 121B (FAM121B), mRNAXM_591602PREDICTED: Bos taurus hypothetical LOC513847 (LOC513847), mRNA4e-33btcn1419 Bt.27908.1.S1_at
10047:1766_CL3Contig1-B:rNM_006406Homo sapiens peroxiredoxin 4 (PRDX4), mRNANM_174433Bos taurus peroxiredoxin 4 (PRDX4), mRNA4e-33btcn1420, DV831160, btcn1422 Bt.5203.1.S1_at Bt.5203.1.S1_at Bt.5203.1.S1_at
10048:19928_CL1Contig1-B:rNM_001034560Bos taurus acyl-CoA thioesterase 9 (ACOT9), mRNA4e-33
10049:2631_CL1Contig6-B:fNM_002970Homo sapiens spermidine/spermine N1-acetyltransferase 1 (SAT1), mRNANM_001034333Bos taurus similar to Diamine acetyltransferase 1 (Spermidine/spermine N(1)-acetyltransferase 1) (SSAT) (SSAT-1) (Putrescine acetyltransferase) (Polyamine N-acetyltransferase 1) (MGC127572), mRNA4e-33CV975551, btcn1412, btcn1411, DV777911, btcn1413, btcn1416, DV784703, DV775677, DV796993, btcn1414 Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at Bt.7594.1.S1_at
1004:25300_CL1Contig1-B:rNM_005090Homo sapiens phospholipase A2, group IVB (cytosolic) (PLA2G4B), mRNAXM_581776PREDICTED: Bos taurus similar to phospholipase A2, group IVB (LOC505485), mRNA4e-33btcn53435 Bt.27188.1.A1_at
10050:4638_17037671-B:fNM_152761Homo sapiens chromosome X open reading frame 58 (CXorf58), mRNAXM_593432PREDICTED: Bos taurus hypothetical LOC515411 (LOC515411), mRNA4e-33btcn1430 Bt.29559.1.A1_at (42747 bases away)
10052:45360_29222301-A:fNM_030624Homo sapiens kelch-like 15 (Drosophila) (KLHL15), mRNAXM_592651PREDICTED: Bos taurus similar to kelch-like 15 (LOC540246), mRNA4e-33CB438363 Bt.29559.1.A1_at (4827 bases away)
10053:43582_11701783-A:fXM_936785, XM_927355PREDICTED: Homo sapiens similar to Exocyst complex component Sec3 (LOC644145), mRNAbtcn17971 Bt.7088.1.S1_at
10054:8128_CL1Contig3-C:fXM_865414PREDICTED: Bos taurus similar to eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, transcript variant 2 (LOC512350), mRNA9e-22
10056:8128_CL1Contig1-A:rNM_030624 (19782 bases away)Homo sapiens kelch-like 15 (Drosophila) (KLHL15), mRNAXM_875969PREDICTED: Bos taurus similar to eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, transcript variant 3 (LOC512350), mRNA4e-33DV799040, btcn36429, btcn17972.1 Bt.21351.1.S1_at (7379 bases away) Bt.21351.1.S1_a_at, Bt.21351.1.S1_at Bt.21351.1.S1_at (8786 bases away)
10057:6424_CL1Contig2-A:rNM_007355Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B member 1 (HSP90AB1), mRNAbtcn2099.1, DV787039, btcn2098.1, btcn8720, BF041977, btcn8722, DT817772, AJ816473 Bt.23263.1.S1_s_at (374 bases away) Bt.23263.1.S1_s_at (41 bases away) Bt.23263.1.S1_s_at (1490 bases away) Bt.23263.1.S1_s_at Bt.23263.1.S1_s_at (1056 bases away) Bt.20169.1.S1_at, Bt.23263.1.S1_s_at Bt.23263.1.S1_s_at (870 bases away) Bt.23263.1.S1_s_at
10058:17739_9711163-A:fNM_000444Homo sapiens phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets) (PHEX), transcript variant 1843529, mRNAAV594764 Bt.14326.2.A1_at (25428 bases away)
10059:20842_CL1Contig1-B:fXM_927744 (7154 bases away)PREDICTED: Homo sapiens similar to spermine synthase (LOC391799), mRNANM_001035471Bos taurus spermine synthase (SMS), mRNA4e-33btcn34372, AM005390, btcn4512.2 Bt.14326.2.A1_at, Bt.14326.1.S1_at Bt.14326.1.S1_at Bt.14326.1.S1_at
10060:7412_CL2Contig1-B:rNM_015884Homo sapiens membrane-bound transcription factor peptidase, site 2 (MBTPS2), mRNAXM_865499PREDICTED: Bos taurus similar to Membrane-bound transcription factor site 2 protease (S2P endopeptidase) (Site-2 protease) (Sterol-regulatory element-binding proteins intramembrane protease), transcript variant 2 (LOC533134), mRNA4e-33btcn34374 Bt.25636.1.A1_at
10061:1668_CL1Contig1-A:rNM_014332Homo sapiens small muscle protein, X-linked (SMPX), mRNANM_001037626Bos taurus small muscle protein, X-linked (SMPX), mRNA4e-33btcn34373, DV793938 Bt.26999.1.S1_at Bt.26999.1.S1_at
10062:7270_CL4Contig1-B:rNM_014927Homo sapiens connector enhancer of kinase suppressor of Ras 2 (CNKSR2), mRNACK847627, btcn34378 Bt.27634.1.A1_a_at Bt.27634.1.A1_a_at
10063:7270_9923685-A:rNM_014927Homo sapiens connector enhancer of kinase suppressor of Ras 2 (CNKSR2), mRNAXM_610733PREDICTED: Bos taurus similar to connector enhancer of kinase suppressor of Ras 2 (LOC532223), partial mRNA4e-33btcn20817 Bt.7594.1.S1_at (74790 bases away)
10064:947_CL3Contig1-B:fNM_004586Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 3 (RPS6KA3), mRNAXM_588472PREDICTED: Bos taurus similar to ribosomal protein S6 kinase polypeptide 3 (LOC511190), partial mRNA4e-33btcn14564 Bt.13410.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10065:3347_CL1Contig1-B:fNM_001412Homo sapiens eukaryotic translation initiation factor 1A, X-linked (EIF1AX), mRNANM_001025329Bos taurus eukaryotic translation initiation factor 1A, X-linked (EIF1AX), mRNA1e-30btcn14559, CK773205, btcn14558, DV779896 Bt.2834.1.S1_at, Bt.7815.1.A1_at, Bt.4265.1.S1_at Bt.2834.1.S1_at, Bt.4265.1.S1_at Bt.2834.1.S1_at Bt.2834.1.S1_at
10066:17549_7526261-A:fNM_001412 (5049 bases away)Homo sapiens eukaryotic translation initiation factor 1A, X-linked (EIF1AX), mRNAXM_868002PREDICTED: Bos taurus hypothetical protein LOC616041 (LOC616041), mRNA4e-33btcn14565 Bt.7815.1.A1_at (4878 bases away)
10067:17549_51816618-A:fNM_152780Homo sapiens hypothetical protein FLJ14503 (FLJ14503), mRNAXM_868002PREDICTED: Bos taurus hypothetical protein LOC616041 (LOC616041), mRNA4e-33btcn14567 Bt.25458.1.A1_at (433 bases away)
10069:10652_CL1Contig1-B:fNM_198279Homo sapiens chromosome X open reading frame 23 (CXorf23), mRNAXM_588246PREDICTED: Bos taurus similar to thyroid hormone receptor associated protein 3 (LOC511003), mRNA4e-33btcn14563, BI534770, btcn14562 Bt.8759.1.S1_at Bt.8759.1.S1_at (9966 bases away) Bt.8759.1.S1_at (141 bases away)
1006:1060_CL2Contig1-A:fNM_014994Homo sapiens mitogen activated protein kinase binding protein 1 (MAPKBP1), mRNAbtcn53432, btcn53434 Bt.24956.1.S1_at (346 bases away) Bt.24956.1.S1_at, Bt.11546.1.S1_at
10071:29289_CL1Contig1-B:fNM_005756Homo sapiens G protein-coupled receptor 64 (GPR64), mRNAXM_606805PREDICTED: Bos taurus similar to G protein-coupled receptor 64 (LOC528383), mRNA4e-33btcn18746 Bt.27388.1.A1_at (95014 bases away)
10072:11393_CL2Contig1-B:rNM_000292Homo sapiens phosphorylase kinase, alpha 2 (liver) (PHKA2), mRNAXM_876599PREDICTED: Bos taurus similar to Phosphorylase b kinase alpha regulatory chain, liver isoform (Phosphorylase kinase alpha L subunit), transcript variant 7 (LOC515732), mRNA4e-33btcn18742, DV921979 Bt.27388.1.A1_at (6325 bases away) Bt.27388.1.A1_at (6281 bases away)
10073:30417_CL6Contig1-B:fNM_152226, NM_152224, NM_006240Homo sapiens protein phosphatase, EF-hand calcium binding domain 1 (PPEF1), transcript variant 1, mRNAXM_580765PREDICTED: Bos taurus similar to Serine/threonine protein phosphatase with EF-hands-1 (PPEF-1) (Protein phosphatase with EF calcium-binding domain) (PPEF) (Serine/threonine protein phosphatase 7) (PP7) (LOC504618), partial mRNA4e-33btcn18740 Bt.19082.2.A1_at (48624 bases away)
10074:32_18451248-A:fXM_592355PREDICTED: Bos taurus similar to carbonic anhydrase VB, mitochondrial precursor (LOC514494), mRNA4e-33
10075:10203_CL1Contig1-B:rNM_005089Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 2 (U2AF1L2), mRNAXM_615048PREDICTED: Bos taurus similar to U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (LOC535064), mRNA4e-24btcn10817 Bt.21842.2.S1_at, Bt.21842.1.A1_at
10076:3983_CL2Contig3-B:fNM_003916, XM_928660, XM_939725Homo sapiens adaptor-related protein complex 1, sigma 2 subunit (AP1S2), mRNANM_001040591Bos taurus adaptor-related protein complex 1, sigma 1 subunit (AP1S1), mRNA4e-33btcn10818, btcn10820 Bt.9086.1.S1_at, Bt.21853.1.S1_at Bt.21853.1.S1_at
10077:11373_CL2Contig2-A:rNM_175859, NM_019857Homo sapiens CTP synthase II (CTPS2), transcript variant 1, mRNANM_174257Bos taurus calbindin 3, (vitamin D-dependent calcium binding protein) (CALB3), mRNA4e-33BP108457, BP109804, CV172535, btcn28012.1, btcn28013, btcn28012 Bt.390.1.S1_at Bt.390.1.S1_at Bt.390.1.S1_at Bt.390.1.S1_at Bt.5609.1.A1_a_at, Bt.5609.3.A1_a_at, Bt.390.1.S1_at Bt.390.1.S1_at
10078:5912_CL1Contig1-B:fNM_032796Homo sapiens synapse associated protein 1, SAP47 homolog (Drosophila) (SYAP1), mRNANM_001034348Bos taurus similar to SYAP1 protein (MGC127250), mRNA4e-33btcn28015, CK945396, btcn28016 Bt.8054.2.S1_a_at, Bt.8054.1.S1_at Bt.8054.2.S1_a_at Bt.8054.2.S1_a_at, Bt.8054.1.S1_at
10079:42721_CL1Contig2-B:rNM_018360, NM_032576Homo sapiens chromosome X open reading frame 15 (CXorf15), mRNAXM_865719PREDICTED: Bos taurus similar to Gamma-taxilin (Lipopolysaccharide specific response protein 5), transcript variant 3 (LOC515927), mRNA4e-33btcn28018, btcn28019 Bt.21412.1.A1_at Bt.21412.1.A1_at (1390 bases away)
1007:24102_29197349-B:rXM_944095, XM_932727, XM_932720, XM_031689, XM_939296, XM_944092, XM_944099, XM_932722PREDICTED: Homo sapiens MAX gene associated, transcript variant 1 (MGA), mRNAXM_869255PREDICTED: Bos taurus similar to MAX-interacting protein, transcript variant 2 (LOC532556), mRNA4e-33CK777668 Bt.24350.1.A1_at (5901 bases away)
10080:16134_CL1Contig2-B:rNM_002893Homo sapiens retinoblastoma binding protein 7 (RBBP7), mRNANM_001034638Bos taurus retinoblastoma binding protein 7 (RBBP7), mRNA4e-33btcn28010, btcn28011, btcn28007 Bt.4908.1.S1_at Bt.4908.1.S1_at Bt.4908.1.S1_at
10082:20156_CL1Contig1-B:fNM_001830Homo sapiens chloride channel 4 (CLCN4), mRNAXM_866096PREDICTED: Bos taurus chloride channel 4, transcript variant 2 (CLCN4), mRNA1e-30btcn25009, btcn25006 Bt.25654.1.A1_at (18042 bases away) Bt.25654.1.A1_at
10083:6880_9751803-A:rXM_601753PREDICTED: Bos taurus similar to CG12600-PA (LOC523454), mRNA4e-33
10084:8311_CL1Contig3-B:rNM_005333 (970 bases away)Homo sapiens holocytochrome c synthase (cytochrome c heme-lyase) (HCCS), mRNAXM_582675PREDICTED: Bos taurus similar to Cytochrome c-type heme lyase (CCHL) (Holocytochrome c-type synthase) (LOC506250), mRNA3e-28btcn51053, btcn51052 Bt.26718.1.S1_a_at Bt.26718.1.S1_a_at
10085:15710_CL1Contig1-A:fNM_005339Homo sapiens huntingtin interacting protein 2 (HIP2), mRNANM_174080Bos taurus huntingtin interacting protein 2 (HIP2), mRNA4e-33BE755805, btcn13659, btcn41297 Bt.1767.1.S1_at Bt.1767.1.S1_at Bt.1767.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10086:21673_CL3Contig1-B:fNM_015200Homo sapiens SCC-112 protein (SCC-112), mRNAXM_612533PREDICTED: Bos taurus similar to SCC-112 protein (LOC533206), mRNA4e-33btcn41293 Bt.16617.2.S1_at (10152 bases away)
10087:38997_CL1Contig1-A:rNM_134258 (304779 bases away)Homo sapiens transducin (beta)-like 1Y-linked (TBL1Y), transcript variant 2, mRNANM_001024472Bos taurus similar to hypothetical protein (MGC17403), mRNA4e-33btcn10076.1 (7836 bases away)
10088:1285_CL1Contig2-A:rNR_000039, NM_004251Homo sapiens RAB9, member RAS oncogene family, pseudogene 1 (RAB9P1) on chromosome 5XM_877798PREDICTED: Bos taurus similar to Ras-related protein Rab-9A (Rab-9), transcript variant 3 (LOC511776), mRNA4e-33btcn10076, btcn10075 Bt.3243.2.S1_a_at, Bt.3243.1.S1_at Bt.3243.2.S1_a_at, Bt.3243.1.S1_at
10089:45360_CL468Contig1-B:fNM_001011658, XM_939579, NR_002166, NM_014563Homo sapiens spondyloepiphyseal dysplasia, late, pseudogene (SEDLP) on chromosome 19NM_001034796Bos taurus similar to Trafficking protein particle complex protein 2 (Sedlin) (MGC127642), mRNA4e-33btcn10077, DV794675 Bt.13900.1.S1_at, Bt.27952.1.S1_at Bt.13900.1.S1_at, Bt.27952.1.S1_at
1008:24102_CL2Contig1-B:rXM_869255PREDICTED: Bos taurus similar to MAX-interacting protein, transcript variant 2 (LOC532556), mRNA3e-28
10090:3701_CL3Contig1-B:fNM_003611Homo sapiens oral-facial-digital syndrome 1 (OFD1), mRNAXM_605308PREDICTED: Bos taurus similar to Oral-facial-digital syndrome 1 protein (Protein 71-7A) (LOC526925), mRNA4e-33btcn10079, btcn10078 Bt.13790.1.S1_at Bt.13790.1.S1_at
10091:10344_47689802-A:fXM_586352PREDICTED: Bos taurus similar to Rho-GTPase-activating protein 6 (Rho-type GTPase-activating protein RhoGAPX-1) (LOC509406), mRNA4e-33
10093:18465_163308-A:fNM_182680, NM_006125, NM_001174, NM_001142, NM_013422, NM_013427, NM_182681, NM_001143Homo sapiens amelogenin (amelogenesis imperfecta 1, X-linked) (AMELX), transcript variant 1, mRNANM_001014984Bos taurus amelogenin (X chromosome) (AMELX), mRNA4e-33M63500, M63631, J02696, M63499 Bt.28016.1.S1_s_at, Bt.373.3.A1_at, Bt.373.3.S1_a_at, Bt.373.2.S1_a_at, Bt.28016.1.S1_x_at, Bt.28016.1.A1_at Bt.28016.1.S1_s_at, Bt.373.3.A1_at, Bt.373.3.S1_a_at, Bt.28016.1.S1_x_at, Bt.28016.1.A1_at Bt.28016.1.S1_s_at, Bt.28016.1.S1_x_at, Bt.28016.1.A1_at Bt.28016.1.S1_s_at, Bt.373.3.A1_at, Bt.373.3.S1_a_at, Bt.373.2.S1_a_at, Bt.28016.1.S1_x_at, Bt.28016.1.A1_at
10094:7175_CL6Contig1-A:fNM_003069, NM_139035Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (SMARCA1), transcript variant 1, mRNAXM_604010PREDICTED: Bos taurus similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1) (LOC525657), partial mRNA4e-33btcn9411 Bt.27318.1.S1_at
10095:20077_CL1Contig1-A:rXM_942319 (29699 bases away)PREDICTED: Homo sapiens hypothetical protein LOC651128 (LOC651128), mRNANM_001002885Bos taurus thymosin beta 4, X chromosome (TMSB4X), mRNA6e-23btcn28842.1, btcn16958.3, DV780166.1, btcn50004.2, DV779790.1, DV781170.1, BI679892.1, btcn38887.1, AW463860.2, DV776781.2, btcn50476.1, btcn17980.1, btcn50002.2, DT842104.2, DV781247.2, DN825027.1, btcn16961.2, btcn16959.2, btcn16960.2, btcn16957.2, DN824827.1, DV778644.2, DV781523.1, btcn7763.1, btcn50003.2, DV784992.1, CO885368.2, CO882031.2 Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123273 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123225 bases away) Bt.6812.1.A1_at (123227 bases away) Bt.6812.1.A1_at (123225 bases away) Bt.6812.1.A1_at (123217 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123238 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123220 bases away) Bt.6812.1.A1_at (123225 bases away) Bt.6812.1.A1_at (123238 bases away) Bt.6812.1.A1_at (123218 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123220 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away) Bt.6812.1.A1_at (123216 bases away)
10098:829_CL4Contig1-A:fNM_016562Homo sapiens toll-like receptor 7 (TLR7), mRNANM_001033761Bos taurus toll-like receptor 7 (TLR7), mRNA4e-33btcn16967 Bt.21886.1.S1_at (449 bases away)
10099:20030_45056894-A:fNM_002765, NM_001039091Homo sapiens phosphoribosyl pyrophosphate synthetase 2 (PRPS2), transcript variant 2, mRNAXM_617865PREDICTED: Bos taurus similar to Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate synthetase II) (PRS-II) (LOC537688), partial mRNA8e-13btcn16963, btcn16964 Bt.21886.1.S1_at (34685 bases away) Bt.21886.1.S1_at (34399 bases away)
1009:4974_CL3Contig1-B:fNM_000119Homo sapiens erythrocyte membrane protein band 4.2 (EPB42), mRNANM_174312Bos taurus erythrocyte membrane protein band 4.2 (EPB42), mRNA4e-33btcn19524 Bt.9237.1.S1_at, Bt.134.1.S1_at, Bt.23572.1.S1_at
100:7355_CL1Contig3-B:fNM_144635Homo sapiens chromosome 3 open reading frame 40 (C3orf40), mRNAXM_865873PREDICTED: Bos taurus hypothetical LOC538666, transcript variant 4 (LOC538666), mRNA4e-33btcn12533, btcn12536 Bt.25700.1.A1_at, Bt.26122.1.S1_at, Bt.26122.3.S1_at Bt.26122.3.S1_at
10100:10065_16999211-A:rNM_000273Homo sapiens G protein-coupled receptor 143 (GPR143), mRNAXM_864344PREDICTED: Bos taurus similar to G-protein coupled receptor 143 (Ocular albinism type 1 protein) (LOC613505), mRNA2e-13BM088583, DV913014 Bt.28095.1.S1_at (24958 bases away) Bt.28095.1.S1_at (12155 bases away)
10101:45604_CL1Contig1-B:fNM_134258, NM_134259, NM_005647, NM_033284Homo sapiens transducin (beta)-like 1X-linked (TBL1X), mRNAXM_594088PREDICTED: Bos taurus similar to transducin (beta)-like 1 X-linked (LOC515972), mRNA4e-33btcn11367 Bt.27699.2.S1_at, Bt.27699.1.A1_at
10102:12312_CL1Contig1-B:fNM_015420 (1249 bases away)Homo sapiens WD repeats and SOF1 domain containing (WDSOF1), mRNADV876900, btcn33449, DV777390 Bt.20930.1.A1_at (59248 bases away) Bt.20930.1.A1_at (46151 bases away) Bt.20930.1.A1_at (58252 bases away)
10104:45360_46417028-A:fXM_604257PREDICTED: Bos taurus similar to Anosmin-1 precursor (Kallmann syndrome protein) (Adhesion molecule-like X-linked) (LOC525898), mRNA4e-33
10105:1_29195201-A:rNM_000351 (25608 bases away)Homo sapiens steroid sulfatase (microsomal), arylsulfatase C, isozyme S (STS), mRNACB457531 Bt.9943.1.S1_at (220197 bases away)
10106:1_29263913-A:fNM_000351 (14067 bases away)Homo sapiens steroid sulfatase (microsomal), arylsulfatase C, isozyme S (STS), mRNACB457531 Bt.9943.1.S1_at (220197 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10107:2501_CL1Contig1-B:fNM_024336Homo sapiens iroquois homeobox protein 3 (IRX3), mRNAXM_593913PREDICTED: Bos taurus similar to Iroquois related homeobox 3 (LOC540417), mRNA4e-33CK970772 Bt.16738.1.A1_at (676 bases away)
10108:8563_CL1Contig1-B:rNM_052966Homo sapiens chromosome 1 open reading frame 24 (C1orf24), transcript variant 2, mRNAXM_580992PREDICTED: Bos taurus similar to niban protein isoform 1 (LOC504817), mRNA4e-33btcn17306 Bt.4645.1.S1_at
10109:10756_6860772-A:fNM_025191Homo sapiens ER degradation enhancer, mannosidase alpha-like 3 (EDEM3), mRNAXM_871579PREDICTED: Bos taurus similar to Putative alpha-mannosidase C1orf22, transcript variant 3 (LOC519058), mRNA4e-33AW356766 Bt.25217.1.A1_at (17564 bases away)
1010:41479_CL1Contig1-B:rNM_012142, NM_037370Homo sapiens cyclin D-type binding-protein 1 (CCNDBP1), transcript variant 1, mRNAXM_869787PREDICTED: Bos taurus similar to cyclin D-type binding-protein 1 (LOC617512), mRNA4e-33AJ820897, AM023052, AJ819838, btcn19523, btcn19524 Bt.9237.1.S1_at Bt.9237.1.S1_at Bt.9237.1.S1_at Bt.9237.1.S1_at, Bt.23572.1.S1_at Bt.9237.1.S1_at, Bt.134.1.S1_at, Bt.23572.1.S1_at
10110:44376_CL2Contig2-A:fNM_001560 (43731 bases away)Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNAXM_617456PREDICTED: Bos taurus similar to dedicator of cytokinesis 11 (LOC537297), partial mRNA3e-15btcn48444 Bt.28750.1.S1_at (79817 bases away)
10112:42531_CL1Contig1-A:rNM_015419 (91051 bases away)Homo sapiens matrix-remodelling associated 5 (MXRA5), mRNAXM_586146PREDICTED: Bos taurus similar to T-cell surface glycoprotein E2 precursor (E2 antigen) (CD99 antigen) (MIC2 protein) (12E7) (LOC509230), mRNA4e-33DY114193, CN434029, btcn44023 Bt.7931.1.S1_at Bt.7931.1.S1_at Bt.13829.1.S1_at, Bt.7931.1.S1_at
10113:3881_CL3Contig1-B:fNM_003918Homo sapiens glycogenin 2 (GYG2), mRNAXM_581517PREDICTED: Bos taurus similar to glycogenin 2 (LOC505258), mRNA4e-33btcn16144 Bt.17770.1.A1_at, Bt.28832.1.A1_at
10114:3881_CL2Contig1-B:fXM_581517PREDICTED: Bos taurus similar to glycogenin 2 (LOC505258), mRNA1e-30
10115:4135_47686295-A:fXM_596307PREDICTED: Bos taurus similar to G-protein coupled purinergic receptor P2Y8 (LOC518123), mRNA4e-33
10117:7331_CL1Contig1-B:fNM_001035058Bos taurus acetylserotonin O-methyltransferase-like (ASMTL), mRNA4e-33
10119:34559_CL2Contig1-B:fXM_582865PREDICTED: Bos taurus similar to interleukin 3 receptor, alpha precursor (LOC506419), partial mRNA4e-33
1011:15853_CL1Contig1-B:rNM_024956Homo sapiens transmembrane protein 62 (TMEM62), mRNAXM_593028PREDICTED: Bos taurus similar to transmembrane protein 62, transcript variant 1 (LOC515078), mRNA4e-33btcn19526, CN789956, btcn19527 Bt.8887.1.S1_at Bt.8887.1.S1_at (62 bases away) Bt.8887.1.S1_at (3222 bases away)
10120:44685_CL1Contig2-B:rNM_174660Bos taurus solute carrier family 25 member 6 (SLC25A6), mRNA4e-33
10121:38019_CL26Contig1-B:rNM_005044Homo sapiens protein kinase, X-linked (PRKX), mRNAXM_582115PREDICTED: Bos taurus similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) (LOC505773), mRNA4e-33btcn6737, BF773939 Bt.2991.1.A1_at (5344 bases away) Bt.2991.1.A1_at (2189 bases away)
10123:11000_7055025-A:fNM_015419Homo sapiens matrix-remodelling associated 5 (MXRA5), mRNAAW484919 Bt.25236.1.A1_at (17828 bases away)
10125:11000_CL1Contig1-A:fNM_015419Homo sapiens matrix-remodelling associated 5 (MXRA5), mRNAbtcn6731 Bt.25236.1.A1_at
10126:1_28156383-A:rNM_009589 (13441 bases away)Homo sapiens arylsulfatase D (ARSD), transcript variant 2, mRNAXM_601995PREDICTED: Bos taurus similar to Steryl-sulfatase precursor (Steroid sulfatase) (Steryl-sulfate sulfohydrolase) (Arylsulfatase C) (ASC) (LOC523693), mRNA4e-27DY191535 (1510 bases away)
10127:1_CL2Contig2-B:rNM_009589 (5347 bases away)Homo sapiens arylsulfatase D (ARSD), transcript variant 2, mRNAXM_582265PREDICTED: Bos taurus similar to Arylsulfatase E precursor (ASE) (LOC505899), mRNA4e-33DY214058, btcn6734 Bt.6471.1.S1_at Bt.6471.1.S1_at
10128:1539_42730986-A:rXM_928572, NM_138994, NM_033655, XM_932974Homo sapiens contactin associated protein-like 3 (CNTNAP3), mRNAXM_868829PREDICTED: Bos taurus similar to Contactin-associated protein-like 4 precursor (Cell recognition molecule Caspr4) (LOC616729), mRNA4e-33btcn39457 Bt.24915.1.A1_at
1012:35929_CL1Contig2-B:rNM_174916Homo sapiens ubiquitin protein ligase E3 component n-recognin 1 (UBR1), mRNAXM_882526PREDICTED: Bos taurus similar to ubiquitin protein ligase E3 component n-recognin 1, transcript variant 2 (LOC522464), mRNA4e-33btcn19525 Bt.26936.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10130:6729_7421464-A:fXM_590977PREDICTED: Bos taurus similar to BCL6 co-repressor-like 1 (LOC540023), mRNA4e-33
10131:2857_CL3Contig1-A:fNM_001421Homo sapiens E74-like factor 4 (ets domain transcription factor) (ELF4), mRNAXM_580654PREDICTED: Bos taurus similar to E74-like factor 4 (ets domain transcription factor) (LOC504514), mRNA4e-33btcn45076 Bt.25864.1.S1_at
10133:45259_CL1Contig1-B:fNM_145812, NM_145813, NM_004208Homo sapiens programmed cell death 8 (apoptosis-inducing factor) (PDCD8), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_615824PREDICTED: Bos taurus similar to programmed cell death 8 isoform 2, transcript variant 1 (LOC535714), mRNA4e-33btcn45072 Bt.3272.1.A1_at
10134:9024_CL1Contig1-B:rNM_145812 (5426 bases away)Homo sapiens programmed cell death 8 (apoptosis-inducing factor) (PDCD8), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNAXM_865018PREDICTED: Bos taurus similar to Ras-related protein Rab-33A (Small GTP-binding protein S10), transcript variant 2 (LOC510101), mRNA4e-33btcn45077 Bt.3272.1.A1_at (32781 bases away)
10135:8063_61944749-A:rNM_014500Homo sapiens HIV-1 Tat specific factor 1 (HTATSF1), mRNAXM_605293PREDICTED: Bos taurus similar to HIV TAT specific factor 1 (LOC526910), mRNA4e-33btcn36447 Bt.9198.1.A1_at (1412 bases away)
10136:37989_CL1Contig1-B:fNM_000074Homo sapiens CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome) (CD40LG), mRNANM_174624Bos taurus tumor necrosis factor (ligand) superfamily, member 5 (TNFSF5), mRNA4e-33btcn36449 Bt.49.1.S1_at, Bt.18375.1.S1_at
10137:3766_42583507-A:rNM_054021 (9089 bases away)Homo sapiens G protein-coupled receptor 101 (GPR101), mRNAXM_587014PREDICTED: Bos taurus similar to transmembrane 9 superfamily member 2 (LOC509946), mRNA4e-33btcn36448, CB444834 Bt.25030.1.A1_a_at Bt.25030.1.A1_a_at
10138:918_CL1Contig1-B:fNM_001448Homo sapiens glypican 4 (GPC4), mRNAXM_592079PREDICTED: Bos taurus similar to glypican 4 (LOC540179), mRNA4e-33btcn9361 Bt.19508.1.A1_at
10139:2195_CL4Contig1-B:fNM_000276, NM_001587Homo sapiens oculocerebrorenal syndrome of Lowe (OCRL), transcript variant a, mRNAXM_615958PREDICTED: Bos taurus similar to phosphatidylinositol polyphosphate 5-phosphatase isoform a (LOC535844), partial mRNA4e-33btcn29723 Bt.9942.1.S1_at
1013:45360_CL452Contig1-B:rXM_613662PREDICTED: Bos taurus similar to hepatocyte growth factor activator inhibitor 1 isoform 2 precursor (LOC534040), partial mRNA1e-30
10140:20913_162871-B:fNM_001031812, NM_004384Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 1, mRNAXM_876830PREDICTED: Bos taurus casein kinase I-gamma, transcript variant 12 (LOC407190), mRNA4e-33M76542, DY156994, BE758016 Bt.29857.1.S1_at, Bt.29857.1.A1_at Bt.29857.1.S1_at, Bt.29857.1.A1_at Bt.29857.1.S1_at
10141:45360_29191557-A:fNM_000133Homo sapiens coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) (F9), mRNAXM_581622PREDICTED: Bos taurus coagulation factor IX (F9), partial mRNA4e-33DV783470, CB422975, btcn24321, DV790057 Bt.13106.1.A1_at, Bt.13106.1.S1_at Bt.24201.1.A1_at Bt.13106.1.A1_at, Bt.13106.1.S1_at, Bt.24201.1.A1_at Bt.24201.1.A1_at (531 bases away)
10142:745_CL2Contig1-B:rNM_005369Homo sapiens MCF.2 cell line derived transforming sequence (MCF2), mRNAXM_610695PREDICTED: Bos taurus similar to Proto-oncogene DBL (Proto-oncogene MCF-2) (LOC532185), mRNA4e-33btcn24323 Bt.24201.1.A1_at (15906 bases away)
10143:9667_58763760-A:rNM_173694Homo sapiens ATPase, Class VI, type 11C (ATP11C), transcript variant 1, mRNAXM_581175PREDICTED: Bos taurus similar to ATPase, Class VI, type 11C isoform a (LOC504969), partial mRNA4e-33CX950233 Bt.24201.1.A1_at (172987 bases away)
10144:42426_6861868-A:fXM_609417PREDICTED: Bos taurus similar to slit and trk like 4 protein (LOC530936), mRNA4e-33
10145:42120_17887603-A:fNM_004350, NM_001031680Homo sapiens runt-related transcription factor 3 (RUNX3), transcript variant 2, mRNAXM_869638PREDICTED: Bos taurus similar to Runt-related transcription factor 3 (Core-binding factor, alpha 3 subunit) (CBF-alpha 3) (Acute myeloid leukemia 2 protein) (Oncogene AML-2) (Polyomavirus enhancer binding protein 2 alpha C subunit) (PEBP2-alpha C) (PEA2-alpha C) (SL3-3 ... (LOC617389), mRNA4e-33BM251975 Bt.18458.2.S1_at (1008 bases away)
10146:20095_CL2Contig1-B:fXM_929546, XM_938776, NM_013943Homo sapiens chloride intracellular channel 4 (CLIC4), mRNAXM_613433PREDICTED: Bos taurus chloride intracellular channel 4 (CLIC4), mRNA4e-33AV609731, btcn33314 Bt.2563.1.S1_at (590 bases away) Bt.981.1.S1_at, Bt.2563.1.S1_at
10148:20002_CL1Contig1-B:fNM_005839Homo sapiens serine/arginine repetitive matrix 1 (SRRM1), mRNAXM_877339PREDICTED: Bos taurus hypothetical protein LOC614436 (LOC614436), mRNA2e-16btcn33310, DN523877, btcn33313 Bt.27157.1.A1_at, Bt.18263.2.S1_a_at Bt.27157.1.A1_at (301 bases away) Bt.27157.1.A1_at
10149:20002_CL2Contig1-B:fNM_005839Homo sapiens serine/arginine repetitive matrix 1 (SRRM1), mRNAbtcn33311, DV917262, btcn33310 Bt.18263.2.S1_a_at (8893 bases away) Bt.18263.2.S1_a_at (13310 bases away) Bt.27157.1.A1_at, Bt.18263.2.S1_a_at
1014:7175_CL10Contig1-B:fNM_020857Homo sapiens vacuolar protein sorting protein 18 (VPS18), mRNAXM_596982PREDICTED: Bos taurus similar to vacuolar protein sorting 18 (LOC518781), mRNA4e-33btcn2350, btcn2349 Bt.27835.1.S1_at Bt.27835.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10151:131_CL1Contig1-B:fNM_002025Homo sapiens AF4/FMR2 family, member 2 (AFF2), mRNAXM_600490PREDICTED: Bos taurus similar to AF4/FMR2 family member 2 (Fragile X mental retardation 2 protein) (Protein FMR-2) (FMR2P) (Ox19 protein) (Fragile X E mental retardation syndrome protein) (LOC522215), partial mRNA4e-33btcn54885 Bt.7816.1.S1_at (38404 bases away)
10152:44308_CL3Contig1-A:fNM_006306 (6183 bases away)Homo sapiens structural maintenance of chromosomes 1A (SMC1A), mRNADN523860, btcn14211 Bt.13308.1.S1_at (5581 bases away) Bt.217.1.S1_at, Bt.28281.1.A1_at, Bt.28281.2.S1_at, Bt.13308.1.S1_at
10153:37467_CL2Contig1-A:rNM_144968, NM_001031745Homo sapiens RIB43A domain with coiled-coils 1 (RIBC1), transcript variant 2, mRNAXM_590498PREDICTED: Bos taurus similar to RIB43A domain with coiled-coils 1 isoform 1 (LOC512894), mRNA4e-33btcn14216, BF230145 Bt.10552.1.A1_at Bt.10552.1.A1_at
10154:7936_CL4Contig2-B:fNM_174334Bos taurus hydroxyacyl-Coenzyme A dehydrogenase, type II hydroxyacyl-Coenzyme A (HADH2), mRNA4e-33
10155:8086_CL1Contig1-A:fNM_005140 (14333 bases away)Homo sapiens cyclic nucleotide gated channel alpha 2 (CNGA2), mRNANM_174052Bos taurus fetal and adult testis expressed transcript protein (FATE), mRNA4e-33btcn14708 Bt.5914.1.S1_at
10156:1438_CL1Contig1-A:rNM_024082Homo sapiens proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) (PRRG3), mRNAXM_588109PREDICTED: Bos taurus similar to Transmembrane gamma-carboxyglutamic acid protein 3 precursor (Proline-rich Gla protein 3) (Proline-rich gamma-carboxyglutamic acid protein 3) (LOC539569), mRNA4e-33btcn14712 Bt.5914.1.S1_at (22136 bases away)
10158:19215_CL3Contig1-B:rNM_032508Homo sapiens family with sequence similarity 11, member A (FAM11A), mRNAXM_614754PREDICTED: Bos taurus similar to family with sequence similarity 11, member A (LOC541149), mRNA4e-33btcn56384 Bt.22281.1.S1_at (4961 bases away)
10159:2801_CL1Contig1-B:fNM_152989, NM_178010, NM_006940Homo sapiens SRY (sex determining region Y)-box 5 (SOX5), transcript variant 1, mRNAXM_613360PREDICTED: Bos taurus similar to SRY (sex determining region Y)-box 5 isoform a (LOC533829), mRNA4e-33btcn56385 Bt.24972.1.A1_at (6380 bases away)
1015:45360_CL335Contig1-B:rNM_019074Homo sapiens delta-like 4 (Drosophila) (DLL4), mRNAXM_596946PREDICTED: Bos taurus similar to Delta-like protein 4 precursor (Drosophila Delta homolog 4), transcript variant 1 (LOC518746), mRNA4e-33btcn2358 Bt.12263.1.S1_at
10160:34946_CL1Contig1-A:fNM_002024 (40694 bases away)Homo sapiens fragile X mental retardation 1 (FMR1), mRNAXM_863986PREDICTED: Bos taurus similar to fragile X mental retardation 1 neighbor (LOC613334), mRNA4e-33btcn47907 Bt.17305.1.A1_at
10161:4806_60450441-B:rNM_002024Homo sapiens fragile X mental retardation 1 (FMR1), mRNAXM_584093PREDICTED: Bos taurus similar to fragile X mental retardation 1 (LOC507482), mRNA4e-33CV798872, btcn47905, AW653504, btcn47906 Bt.8504.1.A1_at Bt.8504.1.A1_at Bt.8504.1.A1_at (85 bases away) Bt.8504.1.A1_at
10162:20521_60445873-A:fNM_005491Homo sapiens chromosome X open reading frame 6 (CXorf6), mRNADN277263 Bt.8024.2.S1_at (249789 bases away)
10163:1310_CL6Contig1-B:rNM_003828Homo sapiens myotubularin related protein 1 (MTMR1), mRNAXM_614787PREDICTED: Bos taurus similar to myotubularin-related protein 1 isoform 1 (LOC541155), mRNA4e-33btcn23292 Bt.8024.2.S1_at, Bt.8024.1.A1_at
10164:7482_10167477-A:rNM_134446 (1314 bases away)Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 2, mRNAbtcn23291 Bt.25439.1.A1_at
10166:44376_13934207-A:rNM_144658Homo sapiens dedicator of cytokinesis 11 (DOCK11), mRNAXM_597000PREDICTED: Bos taurus similar to dedicator of cytokinesis 11 (LOC518799), partial mRNA9e-16BG692387 Bt.2966.1.A1_at (75899 bases away)
10167:7085_10029487-A:fNM_004224Homo sapiens G protein-coupled receptor 50 (GPR50), mRNAXM_608528PREDICTED: Bos taurus similar to Melatonin-related receptor (H9) (LOC530065), mRNA4e-33BE668896 Bt.27520.1.A1_at (1222 bases away)
10168:45360_CL622Contig1-B:rNM_005342Homo sapiens high-mobility group box 3 (HMGB3), mRNAXM_864778PREDICTED: Bos taurus similar to high-mobility group box 3 (LOC613729), mRNA4e-33btcn36371, btcn18713.1 Bt.27520.1.A1_at (156519 bases away) Bt.27520.1.A1_at (155761 bases away)
10169:455_CL2Contig2-B:fNM_004344Homo sapiens centrin, EF-hand protein, 2 (CETN2), mRNANM_001038515Bos taurus centrin, EF-hand protein, 2 (CETN2), mRNA1e-11btcn39262 Bt.2559.1.S1_at
1016:6718_CL3Contig1-A:fNM_024111Homo sapiens ChaC, cation transport regulator-like 1 (E. coli) (CHAC1), mRNAXM_582369PREDICTED: Bos taurus similar to CG10365-PA, isoform A (LOC505991), mRNA4e-33btcn2354 Bt.28669.1.A1_at, Bt.15561.2.A1_s_at
10170:1230_45059009-A:fXM_944232, XM_944241, XM_939593, NM_018196, XM_944236Homo sapiens trimethyllysine hydroxylase, epsilon (TMLHE), mRNAXM_615738PREDICTED: Bos taurus similar to Trimethyllysine dioxygenase, mitochondrial precursor (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha-ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD) (LOC535630), mRNA4e-33btcn11930 Bt.21098.3.S1_at (53716 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10171:7548_60723521-C:fNM_001560Homo sapiens interleukin 13 receptor, alpha 1 (IL13RA1), mRNAbtcn21984, DN513331 Bt.28750.1.S1_at Bt.28750.1.S1_at
10172:241_CL1Contig1-A:fNM_001018055, NM_024332Homo sapiens BRCA1/BRCA2-containing complex, subunit 3 (BRCC3), transcript variant 1, mRNAXM_617657PREDICTED: Bos taurus similar to BRCA1/BRCA2-containing complex subunit 36 isoform 1 (LOC537489), partial mRNA4e-33btcn3283 Bt.27139.2.A1_at (640 bases away)
10173:6625_CL1Contig2-B:rNM_014221, NM_001018024, NM_001018025Homo sapiens mature T-cell proliferation 1 (MTCP1), nuclear gene encoding mitochondrial protein, transcript variant B1, mRNAbtcn3289, btcn3284, CK774803 Bt.27139.1.S1_at Bt.27139.2.A1_at, Bt.27139.1.S1_at Bt.27139.2.A1_at, Bt.27139.1.S1_at
10174:11574_CL1Contig1-B:rNM_001013648, NM_023934Homo sapiens FUN14 domain containing 2 (FUNDC2), mRNANM_174338Bos taurus hepatitis C virus core-binding protein 6 (HCBP6), mRNA4e-33CB531006, btcn3282, btcn3281 Bt.1262.1.S1_at Bt.1262.1.S1_at Bt.1262.1.S1_at
10175:1482_CL1Contig1-B:rNM_002436 (59 bases away)Homo sapiens membrane protein, palmitoylated 1, 55kDa (MPP1), mRNAXM_871769PREDICTED: Bos taurus similar to 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1), transcript variant 4 (LOC510998), mRNA4e-33btcn45037, btcn45036 Bt.12870.1.S1_at Bt.12870.1.S1_at
10176:17191_CL1Contig3-B:fNR_002984 (83 bases away)Homo sapiens small nucleolar RNA, H/ACA box 56 (SNORA56) on chromosome XXM_872363PREDICTED: Bos taurus similar to H/ACA ribonucleoprotein complex subunit 4 (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) (CBF5 homolog), transcript variant 6 (LOC525619), mRNA4e-33btcn45034, btcn45033, CB172014 Bt.12564.1.S1_at (96 bases away) Bt.12564.1.S1_at Bt.12564.1.S1_at (809 bases away)
10177:2656_CL2Contig1-B:fNM_080612Homo sapiens GRB2-associated binding protein 3 (GAB3), mRNAXM_589443PREDICTED: Bos taurus similar to Gab3 protein (LOC512009), mRNA1e-30btcn45038 Bt.12564.1.S1_at (96238 bases away)
10178:14667_61947189-B:rNM_006280Homo sapiens signal sequence receptor, delta (translocon-associated protein delta) (SSR4), mRNANM_001038503Bos taurus similar to Translocon-associated protein, delta subunit precursor (TRAP-delta) (Signal sequence receptor delta subunit) (SSR-delta) (MGC133642), mRNA3e-28btcn26953, btcn26951 Bt.7288.1.S1_at, Bt.23357.1.S1_at Bt.7288.1.S1_at
10179:30973_29202420-B:fNM_004135, NM_174869Homo sapiens isocitrate dehydrogenase 3 (NAD+) gamma (IDH3G), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_865514PREDICTED: Bos taurus similar to isocitrate dehydrogenase 3, gamma (LOC614145), mRNA4e-33btcn26953, btcn26952, DN288287, btcn26955, DN521935, CB428405 Bt.7288.1.S1_at, Bt.23357.1.S1_at Bt.23357.1.S1_at Bt.23357.1.S1_at Bt.23357.1.S1_at Bt.23357.1.S1_at Bt.23357.1.S1_at
1017:7175_CL26Contig1-B:fNM_017553Homo sapiens INO80 complex homolog 1 (S. cerevisiae) (INOC1), mRNAXM_869377PREDICTED: Bos taurus similar to yeast INO80-like protein, transcript variant 2 (LOC505992), mRNA4e-33btcn2355 Bt.6986.1.A1_at
10180:11936_CL2Contig1-B:rNM_014370Homo sapiens SFRS protein kinase 3 (SRPK3), mRNAXM_585087PREDICTED: Bos taurus similar to serine/threonine kinase 23, transcript variant 1 (LOC508325), mRNA4e-33btcn26972 Bt.26888.1.S1_at
10181:7307_CL1Contig1-B:fNM_005745Homo sapiens B-cell receptor-associated protein 31 (BCAP31), mRNANM_001014941Bos taurus B-cell receptor-associated protein 31 (BCAP31), mRNA4e-33CB167952, btcn26960, BF040835, btcn26959 Bt.11493.1.S1_at Bt.11493.1.S1_at Bt.11493.1.S1_at Bt.11493.1.S1_at
10182:5129_CL1Contig1-B:fXM_934874, NR_003083, NM_005629, XM_934879, XM_930453, XM_934882, XM_934870, XM_934875Homo sapiens solute carrier family 6 (neurotransmitter transporter, creatine), member 10 (pseudogene) (SLC6A10P) on chromosome 16NM_174611Bos taurus solute carrier family 6 (neurotransmitter transporter, creatine), member 8 (SLC6A8), mRNA4e-33btcn26974 Bt.4627.1.S2_at, Bt.4627.1.S1_at
10183:31378_CL5Contig1-B:rNM_001039582Homo sapiens pregnancy upregulated non-ubiquitously expressed CaM kinase (PNCK), mRNAXM_865672PREDICTED: Bos taurus similar to Calcium/calmodulin-dependent protein kinase type 1B (CaM kinase IB) (CaM kinase I beta) (CaMKI-beta) (CaM-KI beta) (Pregnancy up-regulated non-ubiquitously expressed CaM kinase homolog) (LOC614251), mRNA4e-33btcn26971 Bt.28829.1.S1_at
10184:3544_CL1Contig3-B:rXM_940909, XM_941086, XM_291577, NM_152274Homo sapiens family with sequence similarity 58, member A (FAM58A), mRNAXM_872954PREDICTED: Bos taurus similar to CG31232-PA, isoform A, transcript variant 3 (LOC534796), mRNA4e-33CK975425, btcn26968, btcn26969, btcn26970 Bt.21329.1.S1_at Bt.21329.1.S1_at Bt.21329.1.S1_at Bt.21329.1.S1_at
10185:12135_CL4Contig1-B:fNM_207107, NM_017518Homo sapiens 26S proteasome-associated UCH interacting protein 1 (UIP1), transcript variant 1, mRNAXM_865893PREDICTED: Bos taurus similar to 26S proteasome-associated UCH37 interacting protein 1 (X-linked protein STS1769) (LOC614404), mRNA4e-33btcn26975 Bt.5351.1.S1_a_at (38331 bases away)
10186:12913_9923868-A:fNM_000425, NM_024003Homo sapiens L1 cell adhesion molecule (L1CAM), transcript variant 1, mRNAXM_594145PREDICTED: Bos taurus similar to Neural cell adhesion molecule L1 precursor (N-CAM L1) (CD171 antigen) (LOC516017), mRNA4e-33btcn30567 Bt.10287.1.A1_at
10187:943_7054576-B:fNM_000116, NM_181313, NM_181311, NM_181314, NM_181312Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 1, mRNAXM_873937PREDICTED: Bos taurus similar to Tafazzin, transcript variant 8 (LOC515177), mRNA4e-33btcn25046, btcn25045, CB446653 Bt.4921.1.S1_at Bt.4921.1.S1_at Bt.4921.1.S1_at
10188:3894_CL1Contig1-B:fNM_006730, NM_001009933, NM_001009934, NM_001009932Homo sapiens deoxyribonuclease I-like 1 (DNASE1L1), transcript variant 1, mRNANM_001038634Bos taurus DNase X (LOC515176), mRNA4e-33btcn25047, CK777276 Bt.28559.1.S1_a_at Bt.28559.1.S1_a_at
10189:12629_CL1Contig1-B:rNR_000011 (274 bases away)Homo sapiens small nucleolar RNA, H/ACA box 70 (SNORA70) on chromosome XNM_174760Bos taurus ribosomal protein L10 (RPL10), mRNA4e-33btcn25043.3, DV791014.3, btcn33553, AV594556.2, btcn33552.2, CX952547.3, BM480669.3, btcn42652.3, btcn25044.2 Bt.26864.2.S1_at (702 bases away) Bt.26864.2.S1_at (702 bases away) Bt.26939.1.S1_at (636 bases away) Bt.26864.2.S1_at (789 bases away) Bt.26864.2.S1_at (702 bases away) Bt.26864.2.S1_at (714 bases away) Bt.26864.2.S1_at (714 bases away) Bt.26864.2.S1_at (702 bases away) Bt.26864.2.S1_at (714 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1018:7175_CL23Contig1-B:fNM_017553Homo sapiens INO80 complex homolog 1 (S. cerevisiae) (INOC1), mRNAXM_882570PREDICTED: Bos taurus similar to yeast INO80-like protein, transcript variant 3 (LOC505992), mRNA4e-33btcn2360 Bt.27436.1.A1_at
10190:5769_CL1Contig2-B:rNM_001456Homo sapiens filamin A, alpha (actin binding protein 280) (FLNA), mRNAXM_614269PREDICTED: Bos taurus filamin A, alpha (actin binding protein 280) (FLNA), mRNA4e-33btcn25053, btcn25054, DT814033, btcn25052 Bt.959.1.S1_at, Bt.959.2.S1_at Bt.959.1.S1_at Bt.959.1.S1_at Bt.959.1.S1_at
10191:32814_CL1Contig3-B:fNM_000117 (659 bases away)Homo sapiens emerin (Emery-Dreifuss muscular dystrophy) (EMD), mRNANM_203361Bos taurus EMD protein (EMD), mRNA4e-33btcn25050, btcn25048, DT814910, btcn25049 Bt.4016.1.S1_at (215 bases away) Bt.4016.1.S1_at Bt.4016.1.S1_at (512 bases away) Bt.4016.1.S1_at
10192:7954_CL1Contig1-A:rNM_001042351, NM_000402Homo sapiens glucose-6-phosphate dehydrogenase (G6PD), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_601113PREDICTED: Bos taurus glucose-6-phosphate dehydrogenase (G6PD), mRNA4e-33btcn49439.1, CK770730 Bt.29913.1.S1_at Bt.29913.1.S1_at
10193:7954_CL2Contig1-B:rNM_001042351, NM_000402Homo sapiens glucose-6-phosphate dehydrogenase (G6PD), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_583628PREDICTED: Bos taurus similar to Glucose-6-phosphate 1-dehydrogenase (G6PD) (LOC507074), mRNA4e-33btcn36217 Bt.29913.1.S1_at
10194:4972_6955596-B:fNM_021806Homo sapiens family with sequence similarity 3, member A (FAM3A), mRNAXM_875028PREDICTED: Bos taurus similar to family 3, member A protein, transcript variant 2 (LOC614075), mRNA4e-33btcn36218, AW427649, btcn36220, BE753220, BM031941 Bt.26859.2.S1_at (1009 bases away) Bt.26859.2.S1_at (992 bases away) Bt.26859.1.S1_at, Bt.26859.2.S1_at Bt.26859.2.S1_at (1029 bases away) Bt.26859.2.S1_at (995 bases away)
10195:6739_7051887-B:fNM_014903 (738868 bases away)Homo sapiens neuron navigator 3 (NAV3), mRNAXM_580676PREDICTED: Bos taurus similar to P3 protein (Solute carrier family 10 member 3), transcript variant 1 (LOC504534), mRNA4e-33AW481781.1, btcn36221.1, CO882918 Bt.22951.1.S1_at (484377 bases away) Bt.22951.1.S1_at (484006 bases away) Bt.25031.1.S1_at (463709 bases away)
10196:9227_CL1Contig2-B:fNM_005235 (478120 bases away)Homo sapiens v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) (ERBB4), transcript variant JM-a/CVT-1, mRNANM_001034214Bos taurus ubiquitin-like 4A (UBL4A), mRNA4e-33btcn36213, btcn36212.1 Bt.27214.1.A1_at (1008235 bases away) Bt.27214.1.A1_at (1008246 bases away)
10197:28110_CL1Contig1-A:fNM_017514 (1829 bases away)Homo sapiens plexin A3 (PLXNA3), mRNAbtcn36203, btcn36202 Bt.3719.1.S1_at Bt.3719.1.S1_at
10198:36357_CL3Contig1-B:fNM_017514Homo sapiens plexin A3 (PLXNA3), mRNAbtcn36216 Bt.27484.1.A1_at, Bt.16749.1.S1_at
1019:7902_CL1Contig1-B:fNM_007280Homo sapiens Opa interacting protein 5 (OIP5), mRNAXM_588370PREDICTED: Bos taurus similar to Opa-interacting protein 5 (LOC511100), mRNA4e-33btcn2362.1 Bt.20216.3.S1_a_at (13085 bases away)
101:10704_CL1Contig1-B:fNM_004953, NM_198241, NM_182917, NM_198242, NM_198244Homo sapiens eukaryotic translation initiation factor 4 gamma, 1 (EIF4G1), transcript variant 5, mRNAXM_585239PREDICTED: Bos taurus similar to Eukaryotic translation initiation factor 4 gamma 1 (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220) (LOC539151), mRNA4e-33BP111720.1, btcn12547, btcn12544 Bt.29325.1.S1_at Bt.29325.1.S1_at Bt.29325.1.S1_at
10200:1583_CL1Contig3-B:fNM_004699Homo sapiens family with sequence similarity 50, member A (FAM50A), mRNANM_001034496Bos taurus similar to XAP-5 protein (MGC128215), mRNA4e-33btcn36209, btcn36210, btcn36207 Bt.1066.2.S1_a_at, Bt.1066.3.S1_a_at Bt.1066.2.S1_a_at, Bt.1066.3.S1_a_at Bt.1066.2.S1_a_at, Bt.1066.3.S1_a_at
10201:7341_CL2Contig1-B:rNM_001493Homo sapiens GDP dissociation inhibitor 1 (GDI1), mRNANM_174064Bos taurus GDP dissociation inhibitor 1 (GDI1), mRNA4e-33btcn36206, DT895572, btcn36205 Bt.2235.1.S2_at, Bt.2235.1.S1_at Bt.2235.1.S1_at Bt.2235.1.S1_at
10202:6379_CL1Contig1-B:fNM_001183Homo sapiens ATPase, H+ transporting, lysosomal accessory protein 1 (ATP6AP1), mRNANM_175806Bos taurus ATP6IP1 protein (ATP6IP1), mRNA4e-33AJ815220, btcn36214 Bt.4442.1.S1_at Bt.4442.1.S1_at
10203:21014_CL1Contig2-B:rNM_001034219Bos taurus similar to CG16865-PA (MGC126998), mRNA1e-30
10204:4774_CL3Contig1-B:fXM_872768PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 2 (UBE2A), mRNA4e-33
10205:45360_CL325Contig2-B:rXM_611972PREDICTED: Bos taurus similar to NF-kappa-B-repressing factor (NFKB-repressing factor) (Transcription factor NRF) (ITBA4 protein), transcript variant 1 (LOC540538), mRNA4e-33
10206:44685_CL3Contig1-A:fXM_864443PREDICTED: Bos taurus similar to mitochondrial solute carrier protein, transcript variant 2 (LOC535541), mRNA4e-33
10207:44685_CL1Contig1-B:rNM_174659Bos taurus solute carrier family 25 member 5 (SLC25A5), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10208:45360_CL220Contig3-B:fNM_145799, NM_145800, NM_145802, NM_015129Homo sapiens septin 6 (SEPT6), transcript variant II, mRNANM_001035430Bos taurus septin 11 (SEPT11), mRNA4e-33CO881763, btcn53878, btcn53875, btcn53877, btcn53876 Bt.5851.2.S1_at (224 bases away) Bt.5851.2.S1_at, Bt.5851.1.A1_at Bt.5851.2.S1_at (4634 bases away) Bt.5851.2.S1_at, Bt.5851.3.S1_at Bt.5851.2.S1_at, Bt.5851.1.A1_at
10209:943_29394170-A:fXM_593150PREDICTED: Bos taurus similar to Tafazzin, transcript variant 1 (LOC515177), mRNA4e-30
1020:3995_CL2Contig1-B:fNM_016359, NM_018454Homo sapiens nucleolar and spindle associated protein 1 (NUSAP1), transcript variant 1, mRNAXM_869232PREDICTED: Bos taurus similar to nucleolar and spindle associated protein 1, transcript variant 1 (LOC616028), mRNA4e-33btcn15076, btcn2352 Bt.18628.1.A1_at, Bt.25412.1.A1_at Bt.18628.1.A1_at (3928 bases away)
10210:45360_45475671-B:fNM_153377Homo sapiens leucine-rich repeats and immunoglobulin-like domains 3 (LRIG3), mRNAXM_583040PREDICTED: Bos taurus similar to leucine-rich repeats and immunoglobulin-like domains 3 (LOC506574), mRNA4e-33btcn24213 Bt.22664.1.A1_at
10211:7183_CL1Contig2-A:fNM_001012978Homo sapiens NGFRAP1-like 1 (NGFRAP1L1), mRNAXM_594188PREDICTED: Bos taurus similar to nerve growth factor receptor (TNFRSF16) associated protein 1 (LOC516056), mRNA4e-33AV664785, btcn42781 Bt.20617.1.S1_at Bt.20617.1.S1_at
10212:45360_CL854Contig1-A:rNM_001011657, NM_001011656, NM_032441Homo sapiens zinc finger, matrin type 1 (ZMAT1), transcript variant 3, mRNAXM_580720PREDICTED: Bos taurus similar to zinc finger, matrin type 1 isoform 1 (LOC504576), partial mRNA4e-33btcn42782 Bt.20617.1.S1_at (201296 bases away)
10213:22263_CL2Contig1-B:rXM_865527PREDICTED: Bos taurus similar to tenomodulin, transcript variant 2 (LOC532034), mRNA1e-30btcn12698.2
10214:1801_CL2Contig1-A:fNM_006667Homo sapiens progesterone receptor membrane component 1 (PGRMC1), mRNAXM_612500PREDICTED: Bos taurus progesterone receptor membrane component 1, transcript variant 1 (PGRMC1), mRNA4e-33btcn1626 Bt.12820.1.S1_at
10216:30338_46418767-A:fNM_006667 (5719 bases away)Homo sapiens progesterone receptor membrane component 1 (PGRMC1), mRNACN439503.1 Bt.12820.1.S1_at (5508 bases away)
10217:13571_62522661-A:rNM_006667 (10281 bases away)Homo sapiens progesterone receptor membrane component 1 (PGRMC1), mRNAXM_868536PREDICTED: Bos taurus similar to DNA segment on chromosome X and Y (unique) 155 expressed sequence isoform 1 (LOC536148), mRNA4e-33CN439503.1 (4134 bases away)
10218:15959_51803833-A:fNM_199478, NM_000533Homo sapiens proteolipid protein 1 (Pelizaeus-Merzbacher disease, spastic paraplegia 2, uncomplicated) (PLP1), transcript variant 1, mRNANM_174149Bos taurus proteolipid protein (PLP1), mRNA4e-33DV878212, btcn43027, btcn43028, DV825504, btcn43025, DV909264, DY158117, DV832446, DY114743, btcn43026 Bt.5293.2.A1_at, Bt.5293.2.S1_at Bt.5293.2.S1_at Bt.5293.2.S1_at (81 bases away) Bt.5293.2.A1_at, Bt.5293.2.S1_at Bt.5293.2.A1_at, Bt.5293.2.S1_at, Bt.26510.1.S1_at Bt.5293.2.S1_at Bt.5293.2.S1_at (1191 bases away) Bt.5293.2.S1_at Bt.5293.2.S1_at Bt.5293.2.A1_at, Bt.5293.2.S1_at
10219:1285_29252262-A:fXM_589286PREDICTED: Bos taurus similar to olfactory receptor, family 7, subfamily A, member 17 (LOC511866), mRNA4e-33
1021:44349_CL1Contig1-B:rNM_002875, NM_133487Homo sapiens RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) (RAD51), transcript variant 1, mRNAXM_592646PREDICTED: Bos taurus similar to DNA repair protein RAD51 homolog 1 (LOC514749), mRNA4e-33btcn25739, BU917211 Bt.22185.1.S1_at (268 bases away) Bt.22185.1.S1_at (2109 bases away)
10220:9656_CL2Contig1-B:rNM_005032Homo sapiens plastin 3 (T isoform) (PLS3), mRNAXM_876771PREDICTED: Bos taurus similar to plastin 3, transcript variant 2 (LOC505687), mRNA4e-33btcn18119, btcn18120 Bt.15906.1.S1_at (575 bases away) Bt.15906.1.S1_at
10221:8771_CL4Contig1-B:fNM_024657 (19107 bases away)Homo sapiens MORC family CW-type zinc finger 4 (MORC4), mRNAXM_614908PREDICTED: Bos taurus similar to TBC1 domain family member 8 (Vascular Rab-GAP/TBC-containing protein) (BUB2-like protein 1) (LOC534962), partial mRNA4e-33btcn49363.2, BM256758.1 Bt.6579.1.S1_at (65108 bases away) Bt.6579.1.S1_at (65108 bases away)
10222:3846_CL6Contig1-A:rNM_020384Homo sapiens claudin 2 (CLDN2), mRNANM_205781Bos taurus claudin 2 (CLDN2), mRNA4e-33btcn49360 Bt.3242.1.S1_at
10223:5772_CL1Contig1-B:fNM_024657Homo sapiens MORC family CW-type zinc finger 4 (MORC4), mRNAXM_587435PREDICTED: Bos taurus similar to zinc finger, CW type with coiled-coil domain 2, transcript variant 1 (LOC539471), mRNA4e-33btcn49357 Bt.6579.1.S1_at
10225:5073_CL2Contig1-B:rNM_004458, NM_022977Homo sapiens acyl-CoA synthetase long-chain family member 4 (ACSL4), transcript variant 1, mRNAXM_877285PREDICTED: Bos taurus similar to acyl-CoA synthetase long-chain family member 4 isoform 1, transcript variant 6 (LOC536628), mRNA4e-33btcn23888 Bt.8015.3.A1_at (1737 bases away)
10226:16429_45474281-A:fNM_018015Homo sapiens chromosome X open reading frame 57 (CXorf57), mRNAXM_867431PREDICTED: Bos taurus hypothetical protein LOC615583 (LOC615583), partial mRNA4e-33btcn31254 Bt.24112.1.A1_at
10227:11533_CL1Contig1-B:fNM_182607Homo sapiens V-set and immunoglobulin domain containing 1 (VSIG1), mRNAXM_582307PREDICTED: Bos taurus similar to V-set and immunoglobulin domain containing 1 (LOC505937), mRNA4e-33btcn291 Bt.28172.2.A1_at, Bt.28172.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10228:4020_CL1Contig1-B:rNM_170750, NM_002814Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 (PSMD10), transcript variant 1, mRNAXM_877528PREDICTED: Bos taurus similar to 26S proteasome non-ATPase regulatory subunit 10 (26S proteasome regulatory subunit p28) (Gankyrin), transcript variant 4 (LOC535414), mRNA4e-33btcn294, btcn293 Bt.19721.1.S1_at Bt.19721.1.S1_at, Bt.19721.2.A1_at
10229:3520_CL1Contig2-B:rNM_178270, NM_052936, NM_178271Homo sapiens ATG4 autophagy related 4 homolog A (S. cerevisiae) (ATG4A), transcript variant 1, mRNANM_001001171Bos taurus Aut2a (LOC408003), mRNA1e-30btcn287, btcn286 Bt.13730.2.S1_at Bt.13730.2.S1_at
1022:20493_CL1Contig1-B:rNM_018145Homo sapiens family with sequence similarity 82, member C (FAM82C), mRNAXM_592645PREDICTED: Bos taurus similar to family with sequence similarity 82, member C (LOC514748), mRNA4e-33BE756950, btcn25745 Bt.22185.1.S1_at (279 bases away) Bt.22185.1.S1_at
10230:45360_CL1394Contig1-B:fNM_033641, NM_001847Homo sapiens collagen, type IV, alpha 6 (COL4A6), transcript variant A, mRNAXM_601826PREDICTED: Bos taurus similar to type IV alpha 6 collagen isoform A precursor (LOC523526), mRNA4e-33btcn288 Bt.19322.1.A1_at (514 bases away)
10232:32575_CL13Contig1-A:fNM_019597, NM_001032393Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H') (HNRPH2), transcript variant 1, mRNAXM_877670PREDICTED: Bos taurus similar to Heterogeneous nuclear ribonucleoprotein H (hnRNP H) (FTP-3), transcript variant 2 (LOC534001), mRNA4e-33btcn37477, DV837754.1 Bt.8355.1.S1_at Bt.8355.1.S1_at (118 bases away)
10233:473_CL2Contig1-B:rNM_000169Homo sapiens galactosidase, alpha (GLA), mRNAXM_611905PREDICTED: Bos taurus similar to Alpha-galactosidase A precursor (Melibiase) (Alpha-D-galactoside galactohydrolase) (Alpha-D-galactosidase A) (Agalsidase alfa) (LOC532742), mRNA4e-33btcn37484 Bt.19260.1.A1_at (4033 bases away)
10234:13707_CL1Contig2-B:rNM_000169 (6193 bases away)Homo sapiens galactosidase, alpha (GLA), mRNAXM_864189PREDICTED: Bos taurus similar to large subunit ribosomal protein L36a (LOC613432), mRNA4e-33btcn28413, btcn18959.3, btcn37474, btcn37475 Bt.19260.1.A1_at (2733 bases away) Bt.19260.1.A1_at (2750 bases away) Bt.19260.1.A1_at (2731 bases away) Bt.19260.1.A1_at (2733 bases away)
10235:584_CL1Contig1-B:rNM_000061Homo sapiens Bruton agammaglobulinemia tyrosine kinase (BTK), mRNANM_001034589Bos taurus Bruton agammaglobulinemia tyrosine kinase (BTK), mRNA4e-33btcn37473 Bt.26060.1.A1_at
10236:6493_CL1Contig2-B:fNM_004085Homo sapiens translocase of inner mitochondrial membrane 8 homolog A (yeast) (TIMM8A), nuclear gene encoding mitochondrial protein, mRNANM_001034480Bos taurus similar to translocase of inner mitochondrial membrane 8 homolog A (MGC128323), mRNA4e-33btcn37478, DV787418, DV792335, BE685011 Bt.7266.1.S1_at Bt.7266.1.S1_at (59 bases away) Bt.7266.1.S1_at Bt.7266.1.S1_at (188 bases away)
10237:13277_18533147-A:fNM_024885Homo sapiens TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa (TAF7L), mRNAXM_867587PREDICTED: Bos taurus similar to TATA box binding protein-associated factor, RNA polymerase II, Q (LOC615711), mRNA4e-33btcn37480 Bt.26485.1.A1_at (6649 bases away)
1023:5496_CL1Contig1-A:rNM_005258Homo sapiens GTP cyclohydrolase I feedback regulator (GCHFR), mRNAXM_869948PREDICTED: Bos taurus similar to GTP cyclohydrolase I feedback regulator (LOC617650), mRNA4e-33btcn25743 Bt.27033.1.S1_at
10240:15677_CL1Contig1-B:rNM_006733 (28412 bases away)Homo sapiens centromere protein I (CENPI), mRNACK835299, btcn40682 Bt.28352.1.S1_at (484 bases away) Bt.28352.1.S1_at (484 bases away)
10241:45360_47685010-B:fNM_000495, NM_033380, NM_033381Homo sapiens collagen, type IV, alpha 5 (Alport syndrome) (COL4A5), transcript variant 1, mRNAXM_588970PREDICTED: Bos taurus similar to alpha 5 type IV collagen isoform 2, precursor (LOC511602), partial mRNA4e-33btcn5250 Bt.16495.1.A1_at, Bt.16495.2.A1_at
10242:2060_CL3Contig1-A:rNM_003604Homo sapiens insulin receptor substrate 4 (IRS4), mRNAXM_592483PREDICTED: Bos taurus similar to insulin receptor substrate 4 (LOC514607), mRNA4e-33btcn5251 Bt.18580.1.A1_at (12523 bases away)
10243:27950_CL1Contig1-A:f
10244:1409_CL1Contig1-A:rNM_017938Homo sapiens family with sequence similarity 70, member A (FAM70A), mRNAXM_613012PREDICTED: Bos taurus hypothetical LOC533569, transcript variant 1 (LOC533569), mRNA4e-33btcn29345 Bt.25188.1.A1_at (12381 bases away)
10245:31352_7055751-B:fNM_018466Homo sapiens glycosyltransferase 28 domain containing 1 (GLT28D1), mRNAXM_878092PREDICTED: Bos taurus similar to glycosyltransferase 28 domain containing 1, transcript variant 4 (LOC506118), mRNA4e-33BM087465, CK972332, btcn39921, btcn39920, btcn39919 Bt.9959.3.S1_a_at Bt.9959.3.S1_a_at, Bt.9959.2.S1_a_at Bt.9959.3.S1_a_at, Bt.9959.2.S1_a_at Bt.9959.3.S1_a_at, Bt.9959.2.S1_a_at Bt.9959.3.S1_a_at, Bt.9959.2.S1_a_at
10246:31352_10169709-A:fNM_001039210Homo sapiens chromosome X open reading frame 45 (CXorf45), mRNAXM_593272PREDICTED: Bos taurus similar to Ovarian tumor locus protein (LOC515282), mRNA4e-33btcn39923 Bt.24370.1.A1_at (27511 bases away)
10247:31352_CL2Contig1-A:rNM_001039210Homo sapiens chromosome X open reading frame 45 (CXorf45), mRNAXM_593272PREDICTED: Bos taurus similar to Ovarian tumor locus protein (LOC515282), mRNA4e-33btcn39922, CB224696.1 Bt.24370.1.A1_at Bt.24370.1.A1_at
10248:16731_CL1Contig2-A:rXM_867692PREDICTED: Bos taurus similar to CG14591-PA, isoform A (LOC615793), partial mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10249:7127_CL2Contig1-A:rNM_015365, NM_001025580Homo sapiens Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1 (AMMECR1), transcript variant 1, mRNAXM_867759PREDICTED: Bos taurus similar to AMME syndrome candidate gene 1 protein (LOC615842), mRNA4e-33btcn20807 Bt.29929.1.S1_at (15755 bases away)
1024:2814_CL1Contig3-B:rNM_018163Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 17 (DNAJC17), mRNAXM_882602PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily C, member 17, transcript variant 4 (LOC524795), mRNA7e-32btcn25733, btcn25737, btcn25731 Bt.15818.1.S1_at Bt.15818.1.S1_at Bt.15818.1.S1_at
10250:16731_CL1Contig1-A:fNM_032227Homo sapiens transmembrane protein 164 (TMEM164), mRNAXM_878216PREDICTED: Bos taurus hypothetical protein LOC524183, transcript variant 2 (LOC524183), mRNA4e-33BT020678, btcn53381.1, btcn53382 Bt.29467.1.A1_at (27455 bases away) Bt.29467.1.A1_at (27455 bases away) Bt.29467.1.A1_at (27455 bases away)
10251:14562_CL8Contig1-B:fNM_002578Homo sapiens p21 (CDKN1A)-activated kinase 3 (PAK3), mRNAXM_878292PREDICTED: Bos taurus similar to p21-activated kinase 3, transcript variant 3 (LOC534526), mRNA4e-33btcn2104 Bt.1807.1.A1_at (5717 bases away)
10252:4064_CL2Contig1-B:fNM_014289Homo sapiens calpain 6 (CAPN6), mRNAXM_586655PREDICTED: Bos taurus similar to calpain 6 (LOC539360), mRNA4e-33btcn2102 Bt.25052.1.S1_at, Bt.10150.1.S1_at
10253:31376_CL4Contig1-B:fNM_000555, NM_178152, NM_178151, NM_178153Homo sapiens doublecortex; lissencephaly, X-linked (doublecortin) (DCX), transcript variant 1, mRNAXM_594176PREDICTED: Bos taurus similar to doublecortin isoform c (LOC540458), mRNA4e-33btcn2109 Bt.11480.1.S1_at (58863 bases away)
10256:15066_CL11Contig1-B:rNM_015052Homo sapiens HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 (HECW1), mRNAXM_581397PREDICTED: Bos taurus similar to NEDD4-like ubiquitin-protein ligase 1 (LOC505153), mRNA4e-33btcn22179 Bt.24366.1.A1_at
10257:8203_CL1Contig1-B:rNM_019082 (443 bases away)Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 (DDX56), mRNANM_001034329Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 (DDX56), mRNA1e-30btcn54805 Bt.20199.1.A1_at
10258:4658_CL2Contig1-A:rNM_182547Homo sapiens transmembrane emp24 protein transport domain containing 4 (TMED4), mRNAXM_585552PREDICTED: Bos taurus similar to transmembrane emp24 protein transport domain containing 4 (LOC508729), mRNA4e-33btcn54812, btcn54811, btcn54810 Bt.5073.1.S1_at (1380 bases away) Bt.5073.1.S1_at Bt.5073.1.S1_at (1022 bases away)
10259:5417_CL1Contig1-B:fNM_002541Homo sapiens oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) (OGDH), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_614420PREDICTED: Bos taurus similar to oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) isoform 1 precursor (LOC534599), mRNA4e-33DT814994, btcn54804, AV667830 Bt.12910.1.S1_at (581 bases away) Bt.12910.1.S1_at Bt.12910.1.S1_at (712 bases away)
1025:8274_CL1Contig2-A:fNM_032850Homo sapiens zinc finger, FYVE domain containing 19 (ZFYVE19), mRNAXM_588310PREDICTED: Bos taurus similar to Zinc finger FYVE domain containing protein 19 (MLL partner containing FYVE domain) (LOC511054), mRNA2e-32btcn25741 Bt.27915.1.S1_at
10261:5417_CL2Contig1-B:fXM_863839PREDICTED: Bos taurus similar to CG7958-PA, isoform A, transcript variant 2 (LOC537266), mRNA4e-33
10262:4609_CL1Contig5-B:rNM_021130, XM_292085, NM_203430, XM_940967, NM_203431, NR_000030Homo sapiens peptidylprolyl isomerase A processed pseudogene (LOC134997) on chromosome 6XM_879456PREDICTED: Bos taurus similar to peptidylprolyl isomerase A isoform 1, transcript variant 2 (LOC614506), mRNA4e-33DV780470.1, DV828592, btcn4118.3, btcn54789, btcn54791, btcn54793, btcn4118 Bt.5024.1.S1_at Bt.5024.1.S1_at Bt.5024.1.S1_at Bt.5024.1.S1_at Bt.5024.1.S1_at Bt.5024.1.S1_at Bt.5024.1.S1_at
10263:1097_CL2Contig1-B:rNM_012412, NM_201516, NM_201517, NM_201436, NM_138635Homo sapiens H2A histone family, member V (H2AFV), transcript variant 1, mRNANM_001038197Bos taurus H2A histone family, member V (H2AFV), mRNA4e-33BF705894, CB452390, btcn54798, btcn54797, DY093978, DN637694 Bt.676.1.S1_at Bt.676.1.S1_at Bt.676.1.S1_at, Bt.28824.1.A1_at Bt.676.1.S1_at, Bt.28824.1.A1_at Bt.676.1.S1_at Bt.676.1.S1_at
10264:12477_CL6Contig1-B:fNM_033054Homo sapiens myosin IG (MYO1G), mRNAXM_594668PREDICTED: Bos taurus similar to myosin IG (LOC516513), mRNA4e-33btcn54837, CK771822 Bt.21178.2.S1_a_at, Bt.21178.1.S1_at Bt.21178.1.S1_at
10265:6273_CL1Contig2-B:rNM_031443, NM_001029835Homo sapiens cerebral cavernous malformation 2 (CCM2), transcript variant 2, mRNAXM_582898PREDICTED: Bos taurus similar to cerebral cavernous malformation 2 isoform 2, transcript variant 1 (LOC506450), mRNA4e-33DN525528, btcn54818, DN275906, btcn54816 Bt.7707.1.S1_at Bt.7707.1.S1_at Bt.7707.1.S1_at Bt.13443.1.S1_at
10266:2261_28292292-A:fXM_166571, XM_936042, XM_943276, XM_374432, XM_937374PREDICTED: Homo sapiens KIAA0363 protein, transcript variant 1 (KIAA0363), mRNAXM_609695PREDICTED: Bos taurus similar to Nascent polypeptide-associated complex alpha subunit, muscle-specific form (Alpha-NAC, muscle-specific form) (LOC531208), mRNA4e-33btcn54819, btcn54816 Bt.13443.1.S1_at Bt.13443.1.S1_at
10269:2261_CL1Contig1-B:rNM_199122, NM_004749, NM_030900Homo sapiens transforming growth factor beta regulator 4 (TBRG4), transcript variant 1, mRNAbtcn54806 Bt.20229.1.S1_at
1026:25905_CL1Contig1-B:rNM_017726Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 14D (PPP1R14D), mRNAXM_869974PREDICTED: Bos taurus similar to Protein phosphatase 1 regulatory subunit 14D (Gastrointestinal and brain-specific PP1-inhibitory protein 1) (GBPI-1) (LOC617670), mRNA4e-33btcn25742 Bt.28295.1.S1_at
10270:5993_CL1Contig1-A:rNM_005856Homo sapiens receptor (calcitonin) activity modifying protein 3 (RAMP3), mRNAXM_864573PREDICTED: Bos taurus similar to receptor (calcitonin) activity modifying protein 3, transcript variant 1 (LOC613547), mRNA4e-33btcn54824, btcn54825 Bt.16077.1.S1_at Bt.16077.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10272:3908_162612-A:fNM_021116Homo sapiens adenylate cyclase 1 (brain) (ADCY1), mRNANM_174229Bos taurus adenylate cyclase 1 (brain) (ADCY1), mRNA4e-33btcn54832 Bt.517.1.S1_at
10273:19782_CL2Contig1-B:fNM_174554Bos taurus insulin-like growth factor binding protein 1 (IGFBP1), mRNA4e-33
10275:15889_10026310-A:rXM_929032 (1306 bases away)PREDICTED: Homo sapiens similar to a disintegrin and metallopeptidase domain 6 (LOC646071), mRNAbtcn45677 Bt.27233.1.S1_at (2513 bases away)
10276:8921_CL1Contig1-B:rNM_001039706Homo sapiens hypothetical protein FLJ21062 (FLJ21062), mRNAXM_591783PREDICTED: Bos taurus hypothetical LOC540140 (LOC540140), partial mRNA4e-33btcn45681 Bt.24791.1.S1_at (41001 bases away)
10278:34974_CL8Contig1-B:rNM_002110Homo sapiens hemopoietic cell kinase (HCK), mRNAbtcn9774 Bt.22050.1.S1_at
10279:14076_CL3Contig1-B:rNM_022748Homo sapiens tensin 3 (TNS3), mRNAXM_594710PREDICTED: Bos taurus similar to tensin-like SH2 domain containing 1 (LOC516555), mRNA4e-33CK831622, btcn9773 Bt.2399.1.S1_at (1955 bases away) Bt.2399.1.S1_at
1027:45360_CL633Contig1-A:fNM_181642, NM_003710, NM_001032367Homo sapiens serine peptidase inhibitor, Kunitz type 1 (SPINT1), transcript variant 2, mRNAXM_869980PREDICTED: Bos taurus similar to hepatocyte growth factor activator inhibitor 1 isoform 1 precursor (LOC617676), mRNA4e-33btcn25738, btcn2346 Bt.27234.2.S1_at Bt.27234.2.S1_at, Bt.27234.1.S1_at
10280:12546_CL1Contig1-A:rNM_000168Homo sapiens GLI-Kruppel family member GLI3 (Greig cephalopolysyndactyly syndrome) (GLI3), mRNAbtcn27989 Bt.23282.1.S1_at
10281:42664_CL1Contig1-B:rNM_002192Homo sapiens inhibin, beta A (activin A, activin AB alpha polypeptide) (INHBA), mRNANM_174363Bos taurus inhibin, beta A (activin A, activin AB alpha polypeptide) (INHBA), mRNA4e-33btcn48129 Bt.12760.1.S1_at
10282:21616_CL1Contig1-B:fNM_013997, NM_013998, NM_013996, NM_003182Homo sapiens tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) (TAC1), transcript variant beta, mRNANM_174193Bos taurus tachykinin, precursor 1 (TAC1), mRNA4e-33btcn8676, btcn8675, CB172771, DV888510, btcn8674 Bt.12930.3.S1_a_at, Bt.12930.1.S1_a_at Bt.12930.3.S1_a_at, Bt.12930.1.S1_a_at Bt.12930.3.S1_a_at Bt.12930.3.S1_a_at Bt.12930.3.S1_a_at, Bt.12930.1.S1_a_at
10283:3740_28292645-A:fNM_014396, NM_080631Homo sapiens vacuolar protein sorting 41 (yeast) (VPS41), transcript variant 1, mRNACB222131, btcn28113 Bt.5747.2.S1_at (68716 bases away) Bt.16541.1.A1_at (56306 bases away)
10284:2300_CL4Contig1-A:f
10285:5524_CL1Contig1-B:fNM_024728Homo sapiens chromosome 7 open reading frame 10 (C7orf10), mRNAXM_866380PREDICTED: Bos taurus similar to CG10877-PA (LOC614767), mRNA4e-33btcn24499, AM033398, btcn24498 Bt.2475.1.S1_at Bt.19653.1.A1_at (77680 bases away) Bt.19653.1.A1_at (77680 bases away)
10286:16186_CL1Contig1-B:rXM_585953PREDICTED: Bos taurus similar to chromosome 7 open reading frame 11 (LOC509064), mRNA4e-33
10287:1945_CL2Contig1-B:fNM_003718, NM_031267Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5), transcript variant 1, mRNAbtcn24497 Bt.17032.1.A1_at, Bt.21933.1.A1_at
10288:4460_CL1Contig1-B:fNM_005763Homo sapiens aminoadipate-semialdehyde synthase (AASS), mRNAXM_599115PREDICTED: Bos taurus similar to aminoadipate-semialdehyde synthase (LOC520865), partial mRNA4e-33DN741086, btcn46767 Bt.5645.1.A1_at Bt.5645.1.A1_at
10289:12129_CL5Contig1-B:rNM_002851Homo sapiens protein tyrosine phosphatase, receptor-type, Z polypeptide 1 (PTPRZ1), mRNAXM_584009PREDICTED: Bos taurus similar to Receptor-type tyrosine-protein phosphatase zeta precursor (R-PTP-zeta) (LOC507411), partial mRNA4e-33btcn46768 Bt.13159.1.S1_at
1028:11726_60447001-A:fNM_182830Homo sapiens MAM domain containing 1 (MAMDC1), mRNAXM_617712PREDICTED: Bos taurus similar to MAM domain containing protein 1 precursor (MAM domain-containing glycosylphosphatidylinositol anchor protein 2) (LOC537543), mRNA4e-33DN278391 Bt.8887.1.S1_at (808160 bases away)
10290:2981_CL1Contig1-B:rNM_176814Homo sapiens zinc finger protein 800 (ZNF800), mRNAXM_865100PREDICTED: Bos taurus similar to CG10979-PA, transcript variant 2 (LOC510277), mRNA1e-30btcn13105 Bt.12005.1.S1_at (2451 bases away)
10291:1547_58767650-A:rNM_000845Homo sapiens glutamate receptor, metabotropic 8 (GRM8), mRNAXM_618563PREDICTED: Bos taurus similar to Metabotropic glutamate receptor 8 precursor (mGluR8) (LOC538360), mRNA1e-30DV886950, CX954123 Bt.12005.1.S1_at (190806 bases away) Bt.29362.1.A1_at (532772 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10292:2368_CL1Contig1-B:fNM_001034591Bos taurus similar to zinc finger, C3HC type 1 (MGC127760), mRNA4e-33
10293:10779_CL1Contig1-B:fNM_003344, XM_929387, NM_182697, XM_939780Homo sapiens ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) (UBE2H), transcript variant 1, mRNANM_001037614Bos taurus similar to Ubiquitin-conjugating enzyme E2 H (Ubiquitin-protein ligase H) (Ubiquitin carrier protein H) (UBCH2) (E2-20K) (MGC134106), mRNA4e-33btcn49062, btcn49064 Bt.4543.1.S1_at, Bt.12094.2.S1_at, Bt.12094.1.S1_at, Bt.6350.1.A1_at Bt.6350.1.A1_at
10295:18140_60452127-A:fNM_020704 (13339 bases away)Homo sapiens family with sequence similarity 40, member B (FAM40B), mRNAbtcn49096 Bt.13254.1.S1_at (6712 bases away)
10296:2931_CL3Contig2-B:rXM_876336PREDICTED: Bos taurus similar to Putative adenosylhomocysteinase 3 (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase), transcript variant 3 (LOC532836), mRNA1e-30
10297:7702_CL1Contig1-B:rNM_005631Homo sapiens smoothened homolog (Drosophila) (SMO), mRNAXM_876452PREDICTED: Bos taurus similar to smoothened, transcript variant 3 (LOC539308), mRNA4e-33btcn49094, btcn49093 Bt.7772.1.S1_at Bt.7772.1.S1_at (2013 bases away)
10298:22_CL4Contig1-B:fNM_178562Homo sapiens tetraspanin 33 (TSPAN33), mRNANM_001034672Bos taurus tetraspanin 33 (TSPAN33), mRNA4e-33CB446157, btcn49091 Bt.22846.1.S1_at, Bt.22846.2.S1_a_at Bt.22846.1.S1_at, Bt.22846.2.S1_a_at
10299:16200_29199872-B:rXM_876876PREDICTED: Bos taurus similar to transportin 3, transcript variant 6 (LOC537183), mRNA4e-33
1029:11770_CL1Contig1-A:rNM_014952Homo sapiens bromo adjacent homology domain containing 1 (BAHD1), mRNAXM_869991PREDICTED: Bos taurus similar to bromo adjacent homology domain containing 1 (LOC617684), partial mRNA4e-33btcn9221 Bt.21388.3.S1_at (3373 bases away)
102:17739_CL2Contig2-B:rNM_005787 (890 bases away)Homo sapiens asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase) (ALG3), mRNADT837293, btcn12532 Bt.25024.1.S1_at Bt.25024.1.S1_at (609 bases away)
10300:28459_CL4Contig1-A:fNM_032643, NM_002200Homo sapiens interferon regulatory factor 5 (IRF5), transcript variant 1, mRNANM_001035465Bos taurus interferon regulatory factor 5 isoform b (IRF5), mRNA4e-33btcn49059, btcn49058 Bt.18476.1.A1_at, Bt.18476.2.S1_at, Bt.18476.1.A1_a_at Bt.18476.1.A1_at, Bt.18476.2.S1_at, Bt.18476.1.A1_a_at
10301:13805_CL2Contig2-B:rNM_003919Homo sapiens sarcoglycan, epsilon (SGCE), mRNAXM_874990PREDICTED: Bos taurus sarcoglycan, epsilon, transcript variant 3 (Sgce), mRNA4e-33btcn41448, btcn41447, btcn41450 Bt.29910.1.S1_at Bt.3126.1.A1_at, Bt.29910.1.S1_at Bt.3126.1.A1_at, Bt.29910.1.S1_at
10302:715_CL2Contig1-A:fXM_935592, XM_940405, XM_928945PREDICTED: Homo sapiens similar to protein phosphatase 1, regulatory (inhibitor) subunit 9A (LOC645983), mRNAXM_586386PREDICTED: Bos taurus similar to Neurabin-1 (Neurabin-I) (Neural tissue-specific F-actin binding protein I) (Protein phosphatase 1 regulatory subunit 9A) (LOC539311), mRNA1e-30btcn41453 Bt.4277.1.A1_at (116253 bases away)
10303:12165_CL3Contig1-B:rNM_000446Homo sapiens paraoxonase 1 (PON1), mRNAXM_602104PREDICTED: Bos taurus similar to paraoxonase 1 (LOC523798), partial mRNA4e-33btcn41444, DV789000, DV783413 Bt.19690.1.A1_at Bt.19690.1.A1_at Bt.19690.1.A1_at
10304:14806_CL2Contig1-B:fNM_183243, NM_000883Homo sapiens IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1), transcript variant 1, mRNAXM_580404PREDICTED: Bos taurus similar to inosine monophosphate dehydrogenase 1 isoform a (LOC504305), mRNA4e-33btcn34135 Bt.29279.1.S1_at
10305:35032_CL1Contig1-A:fXM_380142, XM_379517, XM_938040PREDICTED: Homo sapiens hypothetical LOC401399 (LOC401399), mRNABF043616 Bt.17453.1.A1_at (1174 bases away)
10306:14111_CL2Contig1-A:fNM_018077Homo sapiens RNA binding motif protein 28 (RBM28), mRNAXM_583691PREDICTED: Bos taurus similar to RNA-binding protein 28 (RNA-binding motif protein 28) (LOC507132), mRNA4e-33btcn34139 Bt.17453.1.A1_at (4850 bases away)
10307:14111_CL1Contig1-B:fNM_018077Homo sapiens RNA binding motif protein 28 (RBM28), mRNAXM_583691PREDICTED: Bos taurus similar to RNA-binding protein 28 (RNA-binding motif protein 28) (LOC507132), mRNA4e-33btcn34134 Bt.24942.1.A1_at
10309:23691_CL1Contig1-A:rNM_173928Bos taurus leptin (LEP), mRNA4e-33
1030:1524_CL2Contig1-A:rNM_130468Homo sapiens dermatan 4 sulfotransferase 1 (D4ST1), mRNAXM_588542PREDICTED: Bos taurus similar to dermatan 4 sulfotransferase 1 (LOC511245), mRNA4e-33btcn9215 Bt.10303.1.S1_at
10311:22906_CL1Contig1-B:rXM_929907PREDICTED: Homo sapiens cysteine rich BMP regulator 2 (chordin-like) (CRIM2), mRNAXM_593676PREDICTED: Bos taurus similar to BMP-binding endothelial regulator precursor protein (LOC515624), partial mRNA2e-29btcn16480 Bt.1399.1.S1_at (12399 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10312:13087_CL1Contig1-A:rNM_206918 (4161 bases away)Homo sapiens degenerative spermatocyte homolog 2, lipid desaturase (Drosophila) (DEGS2), mRNAXM_867824PREDICTED: Bos taurus ATPase, vacuolar, 14 kD (ATP6S14), mRNA4e-33btcn16461.1, DY191546 Bt.3860.1.S1_at (24680 bases away) Bt.3860.1.S1_at (24681 bases away)
10313:6530_1905884-A:fNM_001708Homo sapiens opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) (OPN1SW), mRNANM_174567Bos taurus opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) (OPN1SW), mRNA4e-33U92557 Bt.585.1.S1_at
10314:33262_CL1Contig1-A:fNM_032599Homo sapiens testes development-related NYD-SP18 (NYD-SP18), mRNAXM_587184PREDICTED: Bos taurus similar to testes development-related NYD-SP18 (LOC539444), mRNA4e-33btcn16474, btcn16475 Bt.2748.1.S1_at (31451 bases away) Bt.2748.1.S1_at (31129 bases away)
10316:28749_29264514-A:fNM_013332Homo sapiens hypoxia-inducible protein 2 (HIG2), mRNAbtcn16479, btcn16478 Bt.29279.1.S1_at (78174 bases away) Bt.29279.1.S1_at (78119 bases away)
10317:24503_CL1Contig1-A:fNM_018718Homo sapiens testis specific, 14 (TSGA14), mRNAXM_583431PREDICTED: Bos taurus similar to testis specific, 14 (LOC506914), partial mRNA9e-16btcn48630, DY203832 Bt.26934.1.A1_at Bt.26934.1.A1_at (388 bases away)
10318:7298_CL1Contig2-B:rNM_016352Homo sapiens carboxypeptidase A4 (CPA4), mRNAXM_877518PREDICTED: Bos taurus similar to carboxypeptidase A5, transcript variant 4 (LOC511416), mRNA4e-33CB538693, btcn48625, btcn48626 Bt.19969.1.S1_a_at Bt.19969.1.S1_a_at Bt.21706.2.A1_at, Bt.19969.1.S1_a_at, Bt.21706.2.A1_a_at
1031:1598_CL1Contig5-A:rNM_052849Homo sapiens coiled-coil domain containing 32 (CCDC32), mRNAXM_583459PREDICTED: Bos taurus similar to gene model 631, (NCBI) (predicted), transcript variant 1 (LOC506935), mRNA4e-33btcn9211, btcn9212, btcn9209 Bt.21125.2.S1_at, Bt.21125.1.S1_at Bt.21125.2.S1_at, Bt.21125.1.S1_at Bt.21125.2.S1_at, Bt.21125.1.S1_at
10321:15345_CL1Contig1-B:rNM_177524, NM_002402, NM_177525Homo sapiens mesoderm specific transcript homolog (mouse) (MEST), transcript variant 1, mRNAXM_591933PREDICTED: Bos taurus mesoderm-specific transcript, transcript variant 1 (MEST), mRNA4e-33btcn48634 Bt.29873.1.A1_at, Bt.3782.1.A1_at, Bt.28163.1.S1_at, Bt.2817.1.A1_at, Bt.9556.1.S1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at, Bt.29873.1.S1_at
10322:2705_CL2Contig1-A:rNM_012133Homo sapiens coatomer protein complex, subunit gamma 2 (COPG2), mRNAbtcn48634, btcn50452, btcn48632, CB169896 Bt.29873.1.A1_at, Bt.3782.1.A1_at, Bt.28163.1.S1_at, Bt.2817.1.A1_at, Bt.9556.1.S1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at, Bt.29873.1.S1_at Bt.3782.1.A1_at, Bt.2817.1.A1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at Bt.16801.1.A1_at Bt.3782.1.A1_at, Bt.2817.1.A1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at
10323:2705_CL2Contig2-B:rNM_012133Homo sapiens coatomer protein complex, subunit gamma 2 (COPG2), mRNAXM_616755PREDICTED: Bos taurus similar to Coatomer gamma-2 subunit (Gamma-2 coat protein) (Gamma-2 COP) (LOC536616), partial mRNA4e-33btcn48634, btcn50452, CB169896 Bt.29873.1.A1_at, Bt.3782.1.A1_at, Bt.28163.1.S1_at, Bt.2817.1.A1_at, Bt.9556.1.S1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at, Bt.29873.1.S1_at Bt.3782.1.A1_at, Bt.2817.1.A1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at Bt.3782.1.A1_at, Bt.2817.1.A1_at, Bt.16801.1.A1_at, Bt.3705.1.S1_at
10324:36357_17036393-B:fNM_173682 (264207 bases away)Homo sapiens hypothetical protein FLJ40288 (FLJ40288), mRNAXM_618046PREDICTED: Bos taurus putative plexin 2 (PLEX2), mRNA4e-33btcn165, BM105323 Bt.29720.1.S1_at (56011 bases away) Bt.29720.1.S1_at (55970 bases away)
10326:29622_29269391-A:fXM_868371PREDICTED: Bos taurus similar to Podocalyxin-like protein 1 precursor (LOC616366), mRNA4e-33
10327:8014_CL1Contig1-A:fNM_017812Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 3 (CHCHD3), mRNANM_001035475Bos taurus coiled-coil-helix-coiled-coil-helix domain containing 3 (CHCHD3), mRNA4e-33btcn32004, btcn32005, btcn37910 Bt.9857.1.S1_at Bt.9857.1.S1_at Bt.9857.1.S1_at (55 bases away)
10328:12782_49407855-A:fNM_021807Homo sapiens exocyst complex component 4 (EXOC4), transcript variant 1, mRNAXM_617867PREDICTED: Bos taurus similar to Exocyst complex component Sec8 (LOC537690), mRNA4e-27AJ675565, btcn28810 Bt.16326.3.S1_at (454646 bases away) Bt.16326.3.S1_at (159735 bases away)
10329:12165_CL1Contig2-B:rNM_000305, NM_001018161Homo sapiens paraoxonase 2 (PON2), transcript variant 1, mRNANM_001013588Bos taurus paraoxonase 2 (PON2), mRNA4e-33btcn47697 Bt.23599.1.S1_at
1032:11603_CL1Contig3-A:fNM_152260Homo sapiens RNA pseudouridylate synthase domain containing 2 (RPUSD2), mRNAXM_583460PREDICTED: Bos taurus similar to RNA pseudouridylate synthase domain containing 2, transcript variant 1 (LOC506936), mRNA4e-33btcn9216, btcn9217 Bt.21667.1.S1_at, Bt.21667.2.S1_a_at Bt.21667.1.S1_at
10331:12422_CL3Contig1-B:fXM_869494PREDICTED: Bos taurus similar to Bisphosphoglycerate mutase (2,3-bisphosphoglycerate mutase, erythrocyte) (2,3-bisphosphoglycerate synthase) (BPGM) (BPG-dependent PGAM) (LOC617267), mRNA4e-33btcn7104.3, btcn43444.4
10333:12571_CL1Contig1-B:rXM_877790PREDICTED: Bos taurus similar to Pre-mRNA splicing factor PRP17 (hPRP17) (Cell division cycle 40 homolog) (EH-binding protein 3) (Ehb3), transcript variant 2 (LOC514003), mRNA4e-33
10334:21698_CL3Contig1-A:fNM_015891 (9881 bases away)Homo sapiens cell division cycle 40 homolog (S. cerevisiae) (CDC40), mRNAbtcn52324, CB445884 Bt.18483.1.A1_at (2145 bases away) Bt.22667.1.A1_at, Bt.18483.1.A1_at
10335:37696_CL1Contig1-A:rNM_004342 (46001 bases away)Homo sapiens caldesmon 1 (CALD1), transcript variant 2, mRNAXM_605871PREDICTED: Bos taurus similar to ATP/GTP binding protein-like 3 (LOC527479), mRNA4e-33DN538029, DN539445, btcn52321 Bt.23326.2.A1_at (45817 bases away) Bt.23326.2.A1_at (45633 bases away) Bt.23326.2.A1_at (41840 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10336:2386_CL1Contig1-A:fXM_935715 (12109 bases away)PREDICTED: Homo sapiens similar to hypothetical protein FLJ11000 (LOC653851), mRNAXM_593501PREDICTED: Bos taurus hypothetical LOC515475 (LOC515475), mRNA4e-33btcn52314, CN441217 Bt.16326.2.S1_at, Bt.16326.1.S1_at, Bt.16326.3.S1_at Bt.16326.2.S1_at, Bt.16326.1.S1_at, Bt.16326.3.S1_at
10337:17766_11703429-B:fNM_014149Homo sapiens HSPC049 protein (HSPC049), mRNAXM_877955PREDICTED: Bos taurus similar to HSPC049 protein, transcript variant 4 (LOC540606), mRNA1e-30btcn52307, btcn52310, BF604627 Bt.16326.3.S1_at (9916 bases away) Bt.16326.3.S1_at (10132 bases away) Bt.16326.3.S1_at (10169 bases away)
1033:44349_CL3Contig1-A:rNM_144508, NM_170589Homo sapiens cancer susceptibility candidate 5 (CASC5), transcript variant 2, mRNAbtcn9220 Bt.27531.1.A1_at (29143 bases away)
10340:2836_CL1Contig1-B:fNM_194071Homo sapiens cAMP responsive element binding protein 3-like 2 (CREB3L2), mRNAbtcn4339, CR853042, AJ821132.1 Bt.8508.1.A1_at Bt.8508.1.A1_at (160 bases away) Bt.8508.1.A1_at (809 bases away)
10341:45360_15379185-A:fNM_004717Homo sapiens diacylglycerol kinase, iota (DGKI), mRNABI538075, DV841296 Bt.8674.1.A1_at (41571 bases away) Bt.8674.1.A1_at (30836 bases away)
10344:884_CL3Contig1-B:rNM_004717Homo sapiens diacylglycerol kinase, iota (DGKI), mRNAXM_608560PREDICTED: Bos taurus similar to Diacylglycerol kinase, iota (Diglyceride kinase) (DGK-iota) (DAG kinase iota) (LOC530095), mRNA4e-33btcn29569 Bt.22642.1.A1_at
10345:14336_CL2Contig3-B:rNM_002825Homo sapiens pleiotrophin (heparin binding growth factor 8, neurite growth-promoting factor 1) (PTN), mRNANM_173955Bos taurus pleiotrophin (PTN), mRNA4e-33btcn29574 Bt.4844.1.S1_at
10346:26772_CL1Contig1-A:rNM_205855 (12803 bases away)Homo sapiens HWKM1940 (UNQ1940), mRNAXM_868886PREDICTED: Bos taurus hypothetical protein LOC616777 (LOC616777), mRNA4e-33btcn10905 Bt.26359.1.A1_at (13124 bases away)
10347:7832_CL1Contig1-B:fNM_012450Homo sapiens solute carrier family 13 (sodium/sulfate symporters), member 4 (SLC13A4), mRNAXM_878042PREDICTED: Bos taurus similar to Solute carrier family 13 member 4 (Na(+)/sulfate cotransporter SUT-1), transcript variant 2 (LOC531535), mRNA2e-19DV869650, btcn10904, CK776818, btcn10903 Bt.26359.1.A1_at Bt.26359.1.A1_at Bt.26359.1.A1_at Bt.26359.1.A1_at
10348:4967_46412849-A:fNM_020345 (10659 bases away)Homo sapiens NFKB inhibitor interacting Ras-like 1 (NKIRAS1), mRNAXM_868900PREDICTED: Bos taurus ribosomal protein L15 (RPL15), mRNA1e-30DT818070, DV776584, btcn10891, DV781009, btcn29126, CF764123, btcn10890, DV788574, CO875799, DN638818, DV786654, DV791733.2, btcn25469 Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at Bt.23339.1.S1_at
10349:10790_CL1Contig1-C:fNM_015135 (2465 bases away)Homo sapiens nucleoporin 205kDa (NUP205), mRNAbtcn10898 Bt.15716.1.S1_at
10350:10633_CL1Contig2-B:rNM_015135Homo sapiens nucleoporin 205kDa (NUP205), mRNAXM_878210PREDICTED: Bos taurus similar to Nuclear pore complex protein Nup205 (Nucleoporin Nup205) (205 kDa nucleoporin), transcript variant 4 (LOC520924), mRNA4e-33btcn10893, btcn10896 Bt.8231.1.S1_at Bt.8231.1.S1_at
10351:31641_7423864-A:fXM_499478, XM_939152, XM_498242PREDICTED: Homo sapiens C-type lectin domain family 2, member L (CLEC2L), mRNABI682298 (709 bases away)
10353:9020_42726877-B:rXM_925800PREDICTED: Homo sapiens similar to Homeodomain-interacting protein kinase 2 (hHIPk2) (LOC653052), mRNAXM_878474PREDICTED: Bos taurus similar to Homeodomain-interacting protein kinase 2 (hHIPk2), transcript variant 7 (LOC510158), mRNA4e-33CK772734, btcn19628 Bt.25664.1.A1_at Bt.24840.1.A1_at, Bt.25664.1.A1_at
10354:12202_CL3Contig1-B:fNM_030984, NM_001061Homo sapiens thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A) (TBXAS1), transcript variant TXS-I, mRNAXM_866481PREDICTED: Bos taurus similar to Thromboxane-A synthase (TXA synthase) (TXS), transcript variant 2 (LOC509326), mRNA4e-33btcn19641 Bt.29646.1.A1_at, Bt.13516.1.S1_at, Bt.13516.2.S1_at, Bt.13516.3.A1_at
10355:14253_CL1Contig1-A:fNM_030647Homo sapiens KIAA1718 protein (KIAA1718), mRNAXM_599768PREDICTED: Bos taurus similar to PHD finger protein 8 (LOC521504), mRNA4e-33btcn19657 Bt.22219.1.S1_at
10356:2642_CL1Contig1-B:fNM_032295, NM_207113Homo sapiens solute carrier family 37 (glycerol-3-phosphate transporter), member 3 (SLC37A3), transcript variant 2, mRNAXM_878643PREDICTED: Bos taurus similar to solute carrier family 37 (glycerol-3-phosphate transporter), member 3 isoform 1, transcript variant 2 (LOC506910), mRNA4e-33btcn19637, btcn19638 Bt.22105.1.A1_at (19280 bases away) Bt.22105.1.A1_at (57956 bases away)
10357:14773_CL12Contig1-B:fNM_001008749Homo sapiens GTP-binding protein RAB19B (RAB19B), mRNANM_001035040Bos taurus similar to RAB19, member RAS oncogene family (MGC128355), mRNA4e-33btcn19645 (2528 bases away)
10358:12803_CL1Contig2-B:rNM_013446, XM_941328Homo sapiens makorin, ring finger protein, 1 (MKRN1), mRNAXM_592915PREDICTED: Bos taurus similar to Makorin-1 (RING finger protein 61) (LOC514986), mRNA4e-33btcn19622, btcn19623 Bt.11395.1.A1_at Bt.11395.1.A1_at, Bt.13434.3.A1_at, Bt.13434.1.S1_at, Bt.13434.2.A1_at
10359:4725_CL4Contig1-A:rNM_005232Homo sapiens EPH receptor A1 (EPHA1), mRNAXM_604305PREDICTED: Bos taurus similar to Ephrin type-A receptor 1 precursor (Tyrosine-protein kinase receptor EPH) (LOC525946), mRNA1e-30btcn11065 Bt.8881.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1035:44349_11699961-A:fNM_144508, NM_170589Homo sapiens cancer susceptibility candidate 5 (CASC5), transcript variant 2, mRNABF602665 Bt.27531.1.A1_at (3096 bases away)
10361:45360_CL454Contig1-B:rNM_001001317 (22671 bases away)Homo sapiens trypsin X3 (TRY1), mRNAXM_878772PREDICTED: Bos taurus T cell receptor, beta cluster, transcript variant 2 (TRB@), mRNA4e-33btcn36344 Bt.1978.3.S1_at
10363:45360_CL216Contig1-B:rXM_372311 (3397 bases away)PREDICTED: Homo sapiens similar to cubilin (LOC389958), mRNAXM_601498PREDICTED: Bos taurus similar to cubilin (LOC523202), mRNA4e-33btcn16550 Bt.3317.1.A1_at
10364:45360_61754752-A:fNM_000089Homo sapiens collagen, type I, alpha 2 (COL1A2), mRNANM_174520Bos taurus collagen, type I, alpha 2 (COL1A2), mRNA7e-32DV781872, DV780386, DV781579, DV775224, btcn16542, DV781408, DV780074, DT850167, DV925968, DV778976, CX950044, DV781341, DV781945, DV775569, DV780690, DV780419 Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S2_at, Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S2_at, Bt.8124.1.S1_at Bt.8124.1.S2_at, Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S2_at, Bt.8124.1.S1_at Bt.8124.1.S2_at, Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S1_at Bt.8124.1.S1_at
10366:15889_45057554-A:fXM_942010PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC650098), mRNAXM_592631PREDICTED: Bos taurus similar to T-cell receptor beta chain V region C5 precursor (LOC514734), mRNA4e-33btcn17791 Bt.29752.1.S1_x_at, Bt.29752.1.A1_at, Bt.29752.1.S1_at
10368:15889_49424268-A:fXM_942010PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC650098), mRNAXM_869394PREDICTED: Bos taurus similar to T-cell receptor beta chain V region CTL-F3 precursor (LOC617189), mRNA1e-20BM288257.2 (71 bases away)
10369:15889_45467804-A:fXM_936363 (47933 bases away)PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC642207), mRNACK953424 Bt.29766.1.S1_at (4309 bases away)
1036:44349_10028961-A:fNM_144508, NM_170589Homo sapiens cancer susceptibility candidate 5 (CASC5), transcript variant 2, mRNAbtcn9219 Bt.27531.1.A1_at
10371:7360_47167345-B:rXM_864338PREDICTED: Bos taurus similar to Glutathione S-transferase kappa 1 (GST 13-13) (Glutathione S-transferase subunit 13) (GST class-kappa) (GSTK1-1) (hGSTK1) (LOC613498), partial mRNA4e-33
10373:2812_CL1Contig1-A:fXM_934808 (400 bases away)PREDICTED: Homo sapiens similar to hypothetical protein FLJ40722, transcript variant 3 (LOC653691), mRNAXM_587449PREDICTED: Bos taurus hypothetical LOC510320 (LOC510320), mRNA4e-33btcn12102 Bt.21852.1.S1_at
10374:2812_CL1Contig2-B:fXM_935633, XM_942927, XM_936029, XM_934806, XM_942922, XM_926456, XM_936710, NM_014719, XM_935748, XM_930433Homo sapiens KIAA0738 gene product (KIAA0738), mRNAXM_863840PREDICTED: Bos taurus hypothetical LOC533126, transcript variant 3 (LOC533126), mRNA4e-33btcn12103 Bt.1652.1.S1_at, Bt.16636.1.S1_at, Bt.16636.2.A1_at
10375:7496_13933427-A:fNM_018238Homo sapiens multiple substrate lipid kinase (MULK), mRNAXM_590739PREDICTED: Bos taurus similar to multiple substrate lipid kinase (LOC513103), partial mRNA4e-33BG691607 Bt.27367.1.S1_at (110782 bases away)
10376:7653_CL5Contig1-B:fNM_000083Homo sapiens chloride channel 1, skeletal muscle (Thomsen disease, autosomal dominant) (CLCN1), mRNAXM_592469PREDICTED: Bos taurus similar to chloride channel 1, skeletal muscle (Thomsen disease, autosomal dominant) (LOC514597), mRNA4e-33btcn5863 Bt.11160.1.S1_at (28457 bases away)
10377:13186_CL4Contig1-B:rXM_609912PREDICTED: Bos taurus similar to Caspase-2 precursor (CASP-2) (ICH-1 protease) (NEDD2 protein), transcript variant 1 (LOC531419), mRNA4e-33
10378:12839_CL1Contig1-A:rNM_153345Homo sapiens transmembrane protein 139 (TMEM139), mRNAXM_593382PREDICTED: Bos taurus hypothetical LOC515372 (LOC515372), mRNA4e-33btcn5865 Bt.8222.2.S1_a_at, Bt.8222.1.S1_at
10379:3712_49407588-A:fNM_002652 (24257 bases away)Homo sapiens prolactin-induced protein (PIP), mRNAXM_865707PREDICTED: Bos taurus similar to seminal vesicle antigen-like 1 (LOC614268), mRNA1e-30btcn5861 Bt.17040.1.A1_at (15090 bases away)
1037:22834_CL1Contig1-B:fNM_024558, NM_001040662Homo sapiens chromosome 14 open reading frame 138 (C14orf138), transcript variant 1, mRNAXM_592098PREDICTED: Bos taurus similar to Protein C14orf138 homolog, transcript variant 1 (LOC540184), mRNA4e-33btcn23283, DV884519, btcn23284 Bt.4161.1.S1_at (653 bases away) Bt.4161.1.S1_at (644 bases away) Bt.4161.1.S1_at (629 bases away)
10380:10815_CL2Contig1-B:fNM_016019Homo sapiens LUC7-like 2 (S. cerevisiae) (LUC7L2), mRNAXM_594508PREDICTED: Bos taurus similar to Putative RNA-binding protein Luc7-like 2, transcript variant 1 (LOC516355), mRNA4e-33btcn23452 Bt.20191.2.S1_at, Bt.20191.1.S1_at
10381:15504_CL1Contig1-A:fXM_928538, XM_928074, XM_937797, XM_939565PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC645012), mRNAbtcn23468 Bt.20194.1.S1_at
10382:10003_CL1Contig1-B:rXM_928538, XM_939098, XM_928074, XM_379933, XM_937797, XM_376679, XM_939565PREDICTED: Homo sapiens hypothetical protein FLJ25778 (FLJ25778), mRNAXM_864321PREDICTED: Bos taurus similar to Yemanuclein-alpha, transcript variant 2 (LOC540792), mRNA4e-33btcn23483 Bt.17279.1.A1_at (13148 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10383:28711_CL1Contig1-B:rXM_928538, XM_928074, XM_937797, XM_939565, NM_024926Homo sapiens tetratricopeptide repeat domain 26 (TTC26), mRNAXM_584727PREDICTED: Bos taurus similar to CG4525-PA (LOC508011), mRNA1e-30btcn23459 Bt.17279.1.A1_at
10385:18239_CL1Contig1-B:rXM_928538, XM_379932, XM_928074, XM_937797, XM_935389, XM_939565, XM_371956, XM_941132PREDICTED: Homo sapiens KIAA1549 protein, transcript variant 1 (KIAA1549), mRNAXM_590236PREDICTED: Bos taurus hypothetical LOC512679 (LOC512679), mRNA4e-33btcn23488 Bt.25532.1.A1_at
10386:18104_CL1Contig1-A:fNM_001040513Bos taurus hypothetical LOC510137 (LOC510137), mRNA4e-33
10387:2312_CL4Contig1-B:rNM_130841, NM_130840, NM_020632Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 1, mRNAXM_873205PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 3 (LOC518974), mRNA4e-33btcn23484 Bt.22301.1.S1_at
10388:3373_CL2Contig1-A:rNM_174959Homo sapiens hypothetical protein LOC136306 (LOC136306), mRNACK954899, DT850644, btcn23469 Bt.29086.1.S1_at Bt.29086.1.S1_at Bt.29086.1.S1_at
10389:7416_CL4Contig1-B:rNM_003852, NM_015905Homo sapiens tripartite motif-containing 24 (TRIM24), transcript variant 2, mRNAXM_617403PREDICTED: Bos taurus similar to Transcription intermediary factor 1-alpha (TIF1-alpha) (Tripartite motif protein 24) (RING finger protein 82) (LOC537246), mRNA4e-33btcn23462, btcn23463 Bt.20775.1.S1_at (13723 bases away) Bt.20775.1.S1_at (20587 bases away)
1038:45360_CL1230Contig1-B:rNM_006939Homo sapiens son of sevenless homolog 2 (Drosophila) (SOS2), mRNAXM_608440PREDICTED: Bos taurus similar to son of sevenless homolog 2 (LOC529978), mRNA4e-33btcn23282 Bt.19704.1.A1_at
10390:7123_CL1Contig1-B:fNM_000420Homo sapiens Kell blood group, metalloendopeptidase (KEL), mRNAXM_607500PREDICTED: Bos taurus similar to Kell blood group glycoprotein (CD238 antigen) (LOC529060), partial mRNA4e-33DN526866, btcn24158 Bt.27367.1.S1_at (76271 bases away) Bt.27367.1.S1_at (73027 bases away)
10391:116_CL1Contig1-B:fNM_018646Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNAXM_866519PREDICTED: Bos taurus similar to transient receptor potential cation channel, subfamily V, member 6 (LOC614878), mRNA4e-33btcn24136 Bt.5713.1.A1_at, Bt.27367.1.S1_at
10392:4725_CL1Contig1-B:fNM_004445Homo sapiens EPH receptor B6 (EPHB6), mRNAXM_608259PREDICTED: Bos taurus similar to ephrin receptor EphB6 precursor (LOC529800), mRNA3e-31btcn24135, btcn24136 Bt.5713.1.A1_at, Bt.5713.2.S1_at Bt.5713.1.A1_at, Bt.27367.1.S1_at
10393:15889_CL4Contig4-A:fXM_936480PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region LB2 precursor (LOC647406), mRNAXM_581625PREDICTED: Bos taurus similar to T-cell receptor beta chain V region LB2 precursor (LOC505349), mRNA3e-28DV803996.1, DV806464.1, DV800208, btcn24156, btcn24157 Bt.29765.1.S1_at Bt.29765.1.S1_at Bt.29765.1.S1_at Bt.29765.1.S1_at Bt.29765.1.S1_at
10394:15889_CL4Contig9-A:fNM_002771 (22653 bases away)Homo sapiens protease, serine, 3 (mesotrypsin) (PRSS3), mRNAXM_586489PREDICTED: Bos taurus similar to T-cell receptor beta chain C region (LOC509513), mRNA4e-33btcn24139.2, btcn17790.2, CK953424.1, DV801551, btcn24145.1, btcn24153, btcn24140.2, btcn14677, DV806048.2, btcn46727, btcn18448, btcn24152, btcn24142.1, CF765001.3, btcn17933, btcn44193, btcn19934.2, btcn17789.3, DY097840.2, btcn24137.1, DV803283, DV802662, btcn14677.2, btcn24143.1, btcn6207, btcn24141, btcn44193.4, btcn14676, DV806048, DV803996, DV802662.1, DV805931.2, DV806429.5, btcn17793.1, btcn10918.3, btcn13149, btcn24154.1, btcn17582, btcn49570.5, btcn24157.3, btcn24138.5, CN788782.1, btcn17788.1, DV801374, btcn2475, btcn34068.3, btcn24140, DV806414.2, DV803179, btcn24138 Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.2.S1_x_at (3877 bases away) Bt.1978.2.S1_x_at (7928 bases away) Bt.29759.1.A1_at, Bt.29762.1.S1_at, Bt.29762.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (7929 bases away) Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at Bt.1978.2.S1_x_at (7930 bases away) Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.29762.1.S1_at, Bt.29762.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.1.S1_at, Bt.1978.1.S1_a_at Bt.1978.2.S1_x_at (7930 bases away) Bt.1978.2.S1_x_at (7929 bases away) Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.2.S1_x_at (7930 bases away) Bt.1978.2.S1_x_at (3866 bases away) Bt.1978.1.S1_a_at (7465 bases away) Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at Bt.1978.1.S1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at, Bt.1978.13.A1_at Bt.1978.2.S1_x_at (7929 bases away) Bt.4404.1.A1_at, Bt.1978.2.S1_x_at Bt.1978.1.S1_at, Bt.4404.1.A1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at Bt.29759.1.A1_at, Bt.1978.1.S1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.13.A1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.2.S1_x_at Bt.1978.2.S1_x_at (3851 bases away) Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.2.S1_x_at (7930 bases away) Bt.1978.2.S1_x_at (7930 bases away) Bt.1978.2.S1_x_at (7930 bases away) Bt.1978.2.S1_x_at (7929 bases away) Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (3492 bases away) Bt.29759.1.A1_at, Bt.29762.1.S1_at, Bt.29762.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (7921 bases away) Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.2.S1_x_at (3335 bases away) Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at Bt.1978.2.S1_x_at (2412 bases away) Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.2.S1_x_at Bt.1978.2.S1_x_at (7929 bases away) Bt.1978.2.S1_x_at (7930 bases away) Bt.29759.1.A1_at, Bt.1978.1.S1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at
10395:45360_CL119Contig1-B:fNM_002771 (416 bases away)Homo sapiens protease, serine, 3 (mesotrypsin) (PRSS3), mRNANM_174690Bos taurus pancreatic anionic trypsinogen (TRYP8), mRNA1e-27DV801551.1, DV801551, btcn24153, btcn24143, btcn14677, btcn24149, btcn46727, btcn24137, btcn18448, btcn24147, btcn17933, btcn44193, DV803283, DV802662, btcn24143.1, btcn6207, btcn24141, btcn14676, DV806048, DY141957, btcn13149, btcn17582, btcn17788.1, btcn2475, btcn24140, btcn24138 Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.29762.1.S1_at, Bt.29762.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.2.S1_x_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at Bt.4404.1.A1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.29762.1.S1_at, Bt.29762.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.4404.1.A1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at Bt.1978.1.S1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at, Bt.1978.13.A1_at Bt.4404.1.A1_at, Bt.1978.2.S1_x_at Bt.1978.1.S1_at, Bt.4404.1.A1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at Bt.29759.1.A1_at, Bt.1978.1.S1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.13.A1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.2.S1_x_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.13.A1_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.29759.1.A1_at, Bt.29762.1.S1_at, Bt.29762.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at Bt.29759.1.A1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.2.S1_x_at Bt.29759.1.A1_at, Bt.1978.1.S1_at, Bt.1978.5.S1_at, Bt.4404.1.A1_at, Bt.1978.10.A1_a_at, Bt.1978.10.S1_a_at, Bt.1978.13.S1_at, Bt.1978.1.S1_a_at, Bt.1978.2.S1_x_at, Bt.1978.7.A1_at, Bt.1978.7.S1_at, Bt.1978.13.A1_at, Bt.29759.1.S1_at
10397:28256_61729696-A:fNM_005222Homo sapiens distal-less homeobox 6 (DLX6), mRNACR851122 Bt.8476.1.A1_at (9541 bases away)
10398:28256_CL1Contig2-B:fNM_005221Homo sapiens distal-less homeobox 5 (DLX5), mRNAXM_584013PREDICTED: Bos taurus similar to Homeobox protein DLX-5 (LOC507415), mRNA1e-20btcn41695 Bt.8476.1.A1_at, Bt.16059.1.S1_at
10399:4962_CL4Contig1-B:rNM_022073Homo sapiens egl nine homolog 3 (C. elegans) (EGLN3), mRNAXM_866836PREDICTED: Bos taurus similar to egl nine homolog 3 (LOC535578), mRNA4e-33btcn10626 Bt.23232.1.S1_at (838 bases away)
103:2781_CL1Contig2-B:rNM_005787Homo sapiens asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase) (ALG3), mRNAXM_865966PREDICTED: Bos taurus similar to Dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase (Dol-P-Man dependent alpha(1-3)-mannosyltransferase) (Not56-like protein), transcript variant 1 (LOC614624), mRNA4e-33CV982632, btcn12550, CK845965 Bt.3284.2.A1_at, Bt.3284.1.A1_a_at Bt.3284.2.A1_at, Bt.3284.1.A1_a_at Bt.3284.2.A1_at, Bt.3284.1.A1_a_at
10400:11736_CL1Contig1-B:rNM_005435Homo sapiens Rho guanine nucleotide exchange factor (GEF) 5 (ARHGEF5), mRNAXM_590437PREDICTED: Bos taurus similar to rho guanine nucleotide exchange factor 5 isoform 1 (LOC512847), mRNA4e-33btcn10624 Bt.18132.1.A1_at
10403:1950_CL2Contig1-B:rNM_024429, NM_001040633, NM_016203Homo sapiens protein kinase, AMP-activated, gamma 2 non-catalytic subunit (PRKAG2), transcript variant a, mRNAXM_580300PREDICTED: Bos taurus similar to 5-AMP-activated protein kinase, gamma-2 subunit (AMPK gamma-2 chain) (AMPK gamma2) (H91620p) (LOC504219), mRNA4e-33btcn46931 Bt.13229.1.S1_at
10404:16229_CL2Contig1-B:rNM_198285Homo sapiens WD repeat domain 86 (WDR86), mRNAXM_867983PREDICTED: Bos taurus similar to Suppressor/Enhancer of Lin-12 family member (sel-10) (LOC616020), mRNA4e-33btcn46940, btcn46941 Bt.12732.2.S1_at (3381 bases away) Bt.12732.2.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10405:459_CL1Contig1-A:rNM_198285 (5434 bases away)Homo sapiens WD repeat domain 86 (WDR86), mRNACK778758, btcn5770.1, btcn46938 Bt.12732.1.S1_at Bt.12732.1.S1_at Bt.12732.1.S1_at
10406:7781_CL1Contig3-B:fNM_003078, NM_001003801, NM_001003802Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (SMARCD3), transcript variant 2, mRNAXM_590077PREDICTED: Bos taurus similar to chondroitin sulfate glucuronyltransferase (LOC512538), mRNA4e-33btcn46952, btcn46949, btcn46951 Bt.3395.1.S1_at, Bt.13523.1.S1_at, Bt.13523.2.A1_at Bt.3395.1.S1_at, Bt.9840.1.S1_at Bt.3395.1.S1_at
10407:2959_CL2Contig1-A:rNM_019015Homo sapiens chondroitin sulfate glucuronyltransferase (CSGlcA-T), mRNAXM_590077PREDICTED: Bos taurus similar to chondroitin sulfate glucuronyltransferase (LOC512538), mRNA4e-33btcn46952 Bt.3395.1.S1_at, Bt.13523.1.S1_at, Bt.13523.2.A1_at
10408:45360_CL184Contig1-B:rNM_007189, NM_005692Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 2 (ABCF2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNAXM_874164PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 2, transcript variant 5 (LOC513061), mRNA4e-33btcn2419.1, btcn46948 Bt.26550.2.S1_at (6176 bases away) Bt.26550.2.S1_at
10409:795_15776715-A:rXM_868231PREDICTED: Bos taurus similar to testis-specific histone 2b (LOC616255), mRNA1e-30
1040:11726_60444144-C:rNM_182830Homo sapiens MAM domain containing 1 (MAMDC1), mRNAXM_617674PREDICTED: Bos taurus similar to MAM domain containing 1 (LOC537506), partial mRNA4e-33DN275534 Bt.8887.1.S1_at (758779 bases away)
10410:30721_CL3Contig1-B:rXM_868297PREDICTED: Bos taurus similar to centaurin, gamma 3 (LOC616302), mRNA4e-33
10411:26631_CL1Contig1-B:rNM_031434Homo sapiens transmembrane and ubiquitin-like domain containing 1 (TMUB1), mRNANM_001034675Bos taurus similar to B0303.4 (MGC128523), mRNA4e-33btcn46944 Bt.762.1.S1_at
10412:3337_CL1Contig4-B:rNM_003040Homo sapiens solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1) (SLC4A2), mRNAXM_586817PREDICTED: Bos taurus SLC4A2 anion exchanger isoform 2 (LOC404084), mRNA4e-33btcn46923 Bt.29774.1.A1_at, Bt.22970.1.S1_at, Bt.759.1.S1_at
10413:6303_15381189-B:fNM_004935Homo sapiens cyclin-dependent kinase 5 (CDK5), mRNANM_174017Bos taurus cyclin-dependent kinase 5 (CDK5), mRNA4e-33DN520164, btcn46946, btcn46945, DV796524, DN277418 Bt.51.1.S1_at Bt.51.1.S1_at Bt.51.1.S1_at Bt.51.1.S1_at Bt.51.1.S1_at
10414:45360_CL907Contig1-A:fNM_004769 (220 bases away)Homo sapiens amiloride-sensitive cation channel 3 (ACCN3), transcript variant 1, mRNAbtcn46972 Bt.51.1.S1_at (1371 bases away)
10416:45360_CL1462Contig1-A:fNM_007188Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 8 (ABCB8), nuclear gene encoding mitochondrial protein, mRNAbtcn46937 Bt.22027.1.A1_at, Bt.22027.2.S1_at
10417:2259_60987531-A:rNM_173681Homo sapiens ATG9 autophagy related 9 homolog B (S. cerevisiae) (ATG9B), mRNAXM_583368PREDICTED: Bos taurus similar to nitric oxide synthase 3 antisense (LOC506862), mRNA4e-33DN536050 Bt.4662.1.S1_at (6105 bases away)
10418:3293_CL5Contig1-B:rNM_001091Homo sapiens amiloride binding protein 1 (amine oxidase (copper-containing)) (ABP1), mRNANM_001034361Bos taurus amiloride binding protein 1 (amine oxidase (copper-containing)) (ABP1), mRNA4e-33btcn46942 Bt.3255.2.S1_at, Bt.3255.1.A1_at
10419:97_61941616-A:fNM_170606, NM_021230Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3), transcript variant 1, mRNADN638352 Bt.26300.1.A1_at (10153 bases away)
10420:97_CL6Contig1-B:rNM_170606, NM_021230Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3), transcript variant 1, mRNAbtcn21612, btcn21613 Bt.28550.2.S1_at (5630 bases away) Bt.28550.2.S1_at (8603 bases away)
10421:42823_CL1Contig1-B:fNM_022087 (205 bases away)Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) (GALNT11), mRNAXM_875948PREDICTED: Bos taurus similar to Polypeptide N-acetylgalactosaminyltransferase 11 (Protein-UDP acetylgalactosaminyltransferase 11) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 11) (Polypeptide GalNAc transferase 11) (GalNAc-T11) (pp-GaNTase 11)..., transcript variant 5 (LOC534904), mRNA4e-33btcn21609 Bt.9713.1.S1_at
10422:19504_CL1Contig1-B:fXM_945758, XM_379967, XM_935762, XM_936038, XM_934888, XM_945757PREDICTED: Homo sapiens SCO-spondin homolog (Bos taurus), transcript variant 1 (SSPO), mRNANM_174706Bos taurus SCO-spondin (LOC282659), mRNA4e-33DN277081, btcn2813 Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.4812.1.S1_at
10425:28633_9699601-B:rXM_945755, XM_934891, XM_379967, XM_936035, XM_935762, XM_945759, XM_945753, XM_936036, XM_934884, XM_934893, XM_936039, XM_945757PREDICTED: Homo sapiens SCO-spondin homolog (Bos taurus), transcript variant 1 (SSPO), mRNANM_174706Bos taurus SCO-spondin (LOC282659), mRNA4e-33DN277081, btcn2813 Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.4812.1.S1_at
10426:11408_CL1Contig1-A:fNM_145230Homo sapiens ATPase, H+ transporting V0 subunit E2-like (rat) (ATP6V0E2L), mRNAXM_611105PREDICTED: Bos taurus similar to ATPase, H+ transporting, V0 subunit (LOC505224), mRNA4e-33DN277081, btcn2808, DV931186 Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.21662.2.S1_at, Bt.21662.1.S1_at Bt.26124.2.A1_at (196 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10427:4719_CL1Contig1-A:rNM_023942 (16 bases away)Homo sapiens leucine rich repeat containing 61 (LRRC61), mRNAXM_868738PREDICTED: Bos taurus hypothetical protein LOC616659 (LOC616659), mRNA4e-27DN277081, btcn2805, btcn2806 Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.1286.1.S1_a_at (290 bases away) Bt.1286.1.S1_a_at (1005 bases away)
10428:16640_CL1Contig3-A:fNM_002889Homo sapiens retinoic acid receptor responder (tazarotene induced) 2 (RARRES2), mRNAXM_865435PREDICTED: Bos taurus similar to retinoic acid receptor responder (tazarotene induced) 2, transcript variant 2 (LOC508990), mRNA4e-33btcn2803, DV787061, DN277081, btcn2801, btcn2799, btcn2802, btcn2800, DV787857 Bt.1286.1.S1_a_at Bt.1286.1.S1_a_at Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.1286.1.S1_a_at (132 bases away) Bt.1286.1.S1_a_at Bt.1286.1.S1_a_at Bt.1286.1.S1_a_at Bt.1286.1.S1_a_at
10429:20374_CL1Contig1-A:rNM_014374, NM_013400Homo sapiens replication initiator 1 (REPIN1), transcript variant 1, mRNAXM_588858PREDICTED: Bos taurus similar to replication initiator 1 isoform 1 (LOC511510), mRNA4e-33DN277081, CN435164, btcn2817, CR550888 Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.1286.1.S1_a_at (33702 bases away) Bt.1286.1.S1_a_at (32326 bases away) Bt.1286.1.S1_a_at (33483 bases away)
10430:20374_CL2Contig1-A:fNM_173680Homo sapiens zinc finger protein 775 (ZNF775), mRNAbtcn2811, DN277081 Bt.1286.1.S1_a_at (39915 bases away) Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at
10431:45360_6743524-A:fNM_003575Homo sapiens zinc finger protein 282 (ZNF282), mRNAXM_605951PREDICTED: Bos taurus similar to Zinc finger protein 282 (HTLV-I U5RE binding protein 1) (HUB-1) (LOC527558), partial mRNA6e-26AW314268 Bt.17900.1.A1_at (11780 bases away)
10435:45360_CL308Contig1-A:rNM_152411Homo sapiens zinc finger protein 786 (ZNF786), mRNAXM_582851PREDICTED: Bos taurus similar to zinc finger protein 111 (LOC506408), mRNA4e-33btcn27942 Bt.6874.1.S1_at
10436:17709_CL1Contig1-A:rNM_012256 (34 bases away)Homo sapiens zinc finger protein 212 (ZNF212), mRNAXM_583848PREDICTED: Bos taurus similar to zinc finger protein 212 (LOC507268), mRNA4e-33btcn3830 Bt.24554.2.S1_a_at, Bt.24554.1.S1_at
10438:43752_CL2Contig1-A:rNM_001035341Bos taurus zinc finger protein 746 (ZNF746), mRNA4e-33
1043:5112_CL1Contig1-B:fNM_174196Bos taurus thrombospondin (THBS), mRNA7e-32
10441:31981_CL1Contig1-B:fNM_032534Homo sapiens KRAB-A domain containing 1 (KRBA1), mRNADN277081, btcn3832 Bt.26124.2.A1_at, Bt.21722.2.A1_at, Bt.21662.2.S1_at, Bt.21662.1.S1_at, Bt.21820.2.S1_at, Bt.4812.1.S1_at, Bt.1286.1.S1_a_at, Bt.22016.1.S1_at, Bt.26124.1.S1_at Bt.24485.1.S1_at (91124 bases away)
10447:6018_CL1Contig3-B:rNM_004911Homo sapiens protein disulfide isomerase family A, member 4 (PDIA4), mRNAXM_876208PREDICTED: Bos taurus protein disulfide isomerase related protein, transcript variant 2 (erp70), mRNA4e-33AW462886, btcn13893, DY095929, btcn13895, btcn13892, btcn13894, CR553011 Bt.23128.2.A1_at, Bt.23128.3.S1_at Bt.23128.2.A1_at, Bt.23128.3.S1_at Bt.23128.2.A1_at, Bt.23128.3.S1_at Bt.23128.2.A1_at, Bt.23128.3.S1_at, Bt.23128.1.S1_at Bt.23128.2.A1_at, Bt.23128.3.S1_at, Bt.23128.1.S1_at Bt.23128.2.A1_at, Bt.23128.3.S1_at, Bt.23128.1.S1_at Bt.23128.3.S1_at
10448:11104_CL1Contig1-B:fNM_152998, NM_004456Homo sapiens enhancer of zeste homolog 2 (Drosophila) (EZH2), transcript variant 1, mRNAXM_585997PREDICTED: Bos taurus similar to Enhancer of zeste homolog 2 (ENX-1), transcript variant 1 (LOC509106), mRNA4e-33btcn13888, btcn13891 Bt.16094.1.S1_at Bt.16094.1.S1_at
10449:10653_CL1Contig1-B:fNM_003592Homo sapiens cullin 1 (CUL1), mRNAXM_876877PREDICTED: Bos taurus cullin 1, transcript variant 5 (LOC407228), mRNA4e-33btcn13897 Bt.6490.1.S1_at, Bt.29888.1.S1_at, Bt.6490.3.A1_at
1044:8659_CL2Contig1-B:rNM_024884Homo sapiens L-2-hydroxyglutarate dehydrogenase (L2HGDH), mRNAXM_871773PREDICTED: Bos taurus similar to Y45G12B.3, transcript variant 6 (LOC514230), mRNA4e-33btcn54859 Bt.21422.2.S1_at, Bt.21422.1.A1_at
10450:20351_CL1Contig1-B:rNM_002947Homo sapiens replication protein A3, 14kDa (RPA3), mRNANM_001034427Bos taurus similar to replication protein A3, 14kDa (MGC128567), mRNA4e-33DT859827, btcn7201, btcn7200 Bt.10499.1.S1_at Bt.10499.1.S1_at Bt.10499.1.S1_at
10451:29323_CL1Contig2-B:fNM_019005Homo sapiens hypothetical protein FLJ20323 (FLJ20323), mRNAXM_589817PREDICTED: Bos taurus similar to CG7074-PA, transcript variant 1 (LOC512321), mRNA4e-33btcn7204, btcn7207, CB421542, btcn7205 Bt.23173.2.A1_at Bt.23173.2.A1_at Bt.23173.2.A1_at Bt.23173.2.A1_at
10453:45360_CL1184Contig1-A:rXM_209824, XM_943018, XM_374399, XM_932509, XM_936837, NM_001037763, XM_935894PREDICTED: Homo sapiens similar to matrilin 2 precursor, transcript variant 1 (LOC285929), mRNAXM_604080PREDICTED: Bos taurus similar to Matrilin-2 precursor (LOC525725), mRNA4e-33BE685617 Bt.22614.1.S1_at (155326 bases away)
10455:5565_CL1Contig1-B:fNM_020156Homo sapiens core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (C1GALT1), mRNAXM_587037PREDICTED: Bos taurus similar to core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (LOC539417), mRNA1e-30btcn7212 Bt.22740.1.A1_at
10456:8950_CL1Contig1-B:fNM_183356, NM_001673, NM_133436Homo sapiens asparagine synthetase (ASNS), transcript variant 2, mRNAXM_876396PREDICTED: Bos taurus similar to asparagine synthetase, transcript variant 5 (LOC514209), mRNA4e-33btcn7209 Bt.12930.1.S1_a_at (109385 bases away)
10457:97_CL2Contig1-B:fNM_170606, NM_021230Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 3 (MLL3), transcript variant 1, mRNAXM_614290PREDICTED: Bos taurus similar to Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (Homologous to ALR protein) (LOC534503), mRNA4e-33btcn22903 Bt.18271.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1045:46265_CL1Contig1-B:rNM_001003803, NM_001003805, NM_015684Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) (ATP5S), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNANM_001007812Bos taurus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (ATP5S), mRNA4e-33DT901439, DV788003, btcn54846 Bt.13666.1.S1_at Bt.13666.1.S1_at Bt.13666.1.S1_at
10460:45360_CL286Contig2-B:rNM_018051Homo sapiens WD repeat domain 60 (WDR60), mRNAXM_591290PREDICTED: Bos taurus similar to CG15701-PA (LOC513590), mRNA4e-33btcn1276, CK770418, CR852869, btcn1277 Bt.6400.2.S1_a_at Bt.6400.2.S1_a_at Bt.6400.2.S1_a_at Bt.6400.2.S1_a_at
10461:4186_CL3Contig1-A:rbtcn1278, btcn1280.1
10462:860_15379459-A:fXM_615011PREDICTED: Bos taurus similar to 5-hydroxytryptamine (serotonin) receptor 5A (LOC541200), mRNA4e-33
10464:5736_CL1Contig3-B:rXM_590865PREDICTED: Bos taurus similar to PAX interacting (with transcription-activation domain) protein 1 (LOC513213), mRNA4e-33
10465:18969_CL3Contig1-B:fNM_130797, NM_001039350, NM_001936Homo sapiens dipeptidyl-peptidase 6 (DPP6), transcript variant 2, mRNAbtcn32393 Bt.4567.1.S1_a_at, Bt.4567.1.S2_at
10466:459_CL1Contig2-B:fNM_016118Homo sapiens negative regulator of ubiquitin-like proteins 1 (NUB1), mRNAXM_588607PREDICTED: Bos taurus similar to Nedd8 ultimate buster-1 (LOC511298), partial mRNA4e-33btcn5770, btcn46938.1 Bt.26244.1.A1_at (856 bases away) Bt.26244.1.A1_at (856 bases away)
10467:11136_CL1Contig1-B:rNM_058246, NM_005494Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 6 (DNAJB6), transcript variant 2, mRNANM_174532Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 6 (DNAJB6), mRNA1e-30DV798979, AW462596, btcn39395, DV878937, btcn39396 Bt.1731.1.S1_at Bt.1731.1.S1_at (577 bases away) Bt.1731.1.S1_at Bt.1731.1.S1_at (51 bases away) Bt.1731.1.S1_at
10468:5757_CL1Contig1-B:fNM_014671Homo sapiens ubiquitin protein ligase E3C (UBE3C), mRNAXM_585301PREDICTED: Bos taurus similar to Ubiquitin-protein ligase E3C (LOC508513), mRNA4e-33btcn39397, BE721240.1 Bt.29575.1.S1_at, Bt.12245.1.S1_at Bt.29575.1.S1_at, Bt.12245.1.S1_at
10469:19067_CL1Contig1-A:rNM_138400Homo sapiens nucleolar protein with MIF4G domain 1 (NOM1), mRNAbtcn39400 Bt.17059.2.S1_at, Bt.17059.1.S1_at
1046:45360_CL605Contig2-B:fNM_006575, NM_198794Homo sapiens mitogen-activated protein kinase kinase kinase kinase 5 (MAP4K5), transcript variant 1, mRNAbtcn54844 Bt.13666.1.S1_at (109463 bases away)
10470:37159_CL1Contig1-B:rNM_032120Homo sapiens hypothetical protein DKFZp564O0523 (DKFZP564O0523), mRNAXM_876518PREDICTED: Bos taurus hypothetical LOC505408, transcript variant 2 (LOC505408), mRNA4e-33btcn2242, btcn2243 Bt.21334.1.S1_at (20015 bases away) Bt.21334.1.S1_at (20032 bases away)
10471:18495_CL1Contig2-A:fXM_931587, XR_000525, XR_000634, NM_001040057, NM_152789PREDICTED: Homo sapiens similar to RIKEN cDNA 5830415L20 (LOC401015), misc RNAXM_587482PREDICTED: Bos taurus hypothetical LOC539475 (LOC539475), mRNA4e-33DN527794.1, DN525046, btcn2246, btcn8314, btcn2245 Bt.13644.2.S1_at (297 bases away) Bt.13644.2.S1_at Bt.13644.2.S1_at, Bt.21334.1.S1_at Bt.13644.2.S1_at, Bt.21334.1.S1_at Bt.13644.2.S1_at
10472:4767_CL1Contig2-B:fNM_001259Homo sapiens cyclin-dependent kinase 6 (CDK6), mRNAXM_589151PREDICTED: Bos taurus similar to Cell division protein kinase 6 (Serine/threonine-protein kinase PLSTIRE) (LOC511754), mRNA4e-33btcn2253 Bt.25462.1.S1_at
10475:8399_CL1Contig1-B:rNM_002489Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4), nuclear gene encoding mitochondrial protein, mRNANM_175820Bos taurus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4), mRNA4e-33btcn40465, btcn40464, DV775658, btcn40463, DV794191 Bt.4819.1.S1_at Bt.4819.1.S1_at Bt.4819.1.S1_at Bt.4819.1.S1_at Bt.4819.1.S1_at
1047:9752_CL3Contig1-A:rNM_181598, NM_015915Homo sapiens spastic paraplegia 3A (autosomal dominant) (SPG3A), transcript variant 1, mRNANM_001034631Bos taurus spastic paraplegia 3A (autosomal dominant) (SPG3A), mRNA4e-33BI683023, btcn54850 Bt.27481.2.S1_at Bt.27481.1.A1_at, Bt.27481.2.S1_at
10480:12005_CL2Contig1-A:fNM_001042762, NM_022116Homo sapiens fidgetin-like 1 (FIGNL1), transcript variant 2, mRNAXM_584098PREDICTED: Bos taurus similar to fidgetin-like 1 (LOC538986), mRNA4e-33btcn6323 Bt.115.1.S1_at (17121 bases away)
10482:1147_CL1Contig1-B:rNM_000790 (4765 bases away)Homo sapiens dopa decarboxylase (aromatic L-amino acid decarboxylase) (DDC), mRNANM_173907Bos taurus dopa decarboxylase (aromatic L-amino acid decarboxylase) (DDC), mRNA4e-33btcn6324 Bt.115.1.S1_at
10483:2063_CL5Contig1-B:rNM_001001555, NM_001001550, NM_001001549, NM_005311Homo sapiens growth factor receptor-bound protein 10 (GRB10), transcript variant 1, mRNAXM_602256PREDICTED: Bos taurus growth factor receptor-bound protein 10, transcript variant 1 (Grb10), mRNA4e-33btcn6321, btcn6322 Bt.24356.1.S1_at (65 bases away) Bt.21580.1.S1_at, Bt.24356.1.S1_at
10485:3109_CL4Contig1-B:fNM_033128Homo sapiens scinderin (SCIN), mRNANM_174177Bos taurus scinderin (SCIN), mRNA6e-26btcn29114 Bt.3980.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10486:10645_CL2Contig1-A:rXM_932383, NM_005738, NM_212460, XM_927886, XM_941339, NM_001037164, XM_945148Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 1, mRNAbtcn12149, btcn12150, btcn12148 Bt.7170.1.S1_at Bt.7170.1.S1_at (33 bases away) Bt.28945.1.A1_at, Bt.7170.1.S1_at
10488:6987_CL2Contig1-A:fNM_004080, NM_145695Homo sapiens diacylglycerol kinase, beta 90kDa (DGKB), transcript variant 1, mRNAbtcn34794, btcn34795 Bt.21192.2.A1_at (413661 bases away) Bt.21192.2.A1_at (413515 bases away)
10489:5992_49358271-A:fNM_176813 (535886 bases away)Homo sapiens breast cancer membrane protein 11 (BCMP11), mRNAbtcn41629 Bt.17188.1.A1_at (128088 bases away)
1048:16375_CL1Contig1-B:rNM_021818Homo sapiens salvador homolog 1 (Drosophila) (SAV1), mRNAXM_594712PREDICTED: Bos taurus similar to WW45 protein (LOC516557), mRNA4e-33btcn54845, DV776883 Bt.1915.1.S1_at Bt.1915.1.S1_at (306 bases away)
10490:6011_CL1Contig1-A:rNM_015464Homo sapiens sclerostin domain containing 1 (SOSTDC1), mRNAXM_870673PREDICTED: Bos taurus similar to cystine knot-containing secreted protein (LOC523184), mRNA4e-33btcn48264 Bt.27202.1.A1_at (168 bases away)
10491:33763_49410891-A:rXM_937075, XM_499058, XM_499506PREDICTED: Homo sapiens similar to U2 small nuclear ribonucleoprotein A (U2 snRNP-A) (LOC442512), mRNADT849896, AJ678306 Bt.18775.1.A1_at Bt.18775.1.A1_at (5140 bases away)
10492:3510_CL1Contig1-B:fNM_020319Homo sapiens ankyrin repeat and MYND domain containing 2 (ANKMY2), mRNAXM_585911PREDICTED: Bos taurus similar to ankyrin repeat and MYND domain containing 2, transcript variant 1 (LOC509032), mRNA4e-33btcn48255, AJ821035, btcn48255.1, DV790587, btcn48254 Bt.13506.1.A1_at Bt.13506.1.A1_at Bt.13506.1.A1_at (219 bases away) Bt.13506.1.A1_at Bt.13506.1.A1_at
10493:5256_CL2Contig1-B:rNM_014038Homo sapiens basic leucine zipper and W2 domains 2 (BZW2), mRNAXM_876991PREDICTED: Bos taurus basic leucine zipper and W2 domains 2, transcript variant 3 (BZW2), mRNA4e-33btcn48259 Bt.5495.1.S1_at
10494:13611_CL2Contig1-B:rNM_014399Homo sapiens tetraspanin 13 (TSPAN13), mRNANM_001035362Bos taurus tetraspanin 13 (TSPAN13), mRNA4e-33DV787066, DV777033, btcn48257, DV777151, DV778840 Bt.10098.1.S1_at Bt.10098.1.S1_at Bt.10098.1.S1_at Bt.10098.1.S1_at Bt.10098.1.S1_at (104 bases away)
10495:7136_CL1Contig1-A:rNM_001040500Bos taurus anterior gradient 2 homologue (agr2), mRNA1e-30
10496:7136_CL1Contig2-A:rNM_006408Homo sapiens anterior gradient 2 homolog (Xenopus laevis) (AGR2), mRNANM_001040500Bos taurus anterior gradient 2 homologue (agr2), mRNA4e-33btcn48260, btcn55104 Bt.29129.1.S1_at Bt.29129.1.S1_at
10498:42543_CL2Contig1-B:fNM_020223Homo sapiens family with sequence similarity 20, member C (FAM20C), mRNAXM_614520PREDICTED: Bos taurus similar to family with sequence similarity 20, member C (LOC534672), mRNA4e-33btcn49934, CK778827 Bt.11748.1.A1_at, Bt.11748.2.S1_a_at Bt.11748.1.A1_at, Bt.11748.2.S1_a_at
10499:11669_61013725-A:fXM_615498PREDICTED: Bos taurus similar to histone deacetylase 9 isoform 5 (LOC535415), partial mRNA4e-33
1049:34416_60722666-A:rNM_182945, NM_182946, NM_182944, NM_016350, NM_020921Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 4, mRNAXM_587500PREDICTED: Bos taurus similar to ninein isoform 5, transcript variant 1 (LOC510366), mRNA4e-33btcn54857 Bt.1915.1.S1_at (84923 bases away)
104:45360_CL134Contig1-B:rNM_018358Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 3 (ABCF3), mRNAXM_609457PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family F (GCN20), member 3 (LOC530975), mRNA4e-33DV792155, btcn12528 Bt.6886.1.S1_at (971 bases away) Bt.6886.2.S1_at, Bt.6886.1.S1_at
10501:2621_CL1Contig1-B:rNM_001002926Homo sapiens TWIST neighbor (TWISTNB), mRNAXM_589883PREDICTED: Bos taurus similar to TWIST neighbor (LOC512375), mRNA4e-33btcn45418 Bt.14314.1.S1_at, Bt.13392.1.S1_at
10502:6590_CL1Contig1-B:fNM_018719Homo sapiens cell division cycle associated 7-like (CDCA7L), mRNAXM_592513PREDICTED: Bos taurus similar to transcription factor RAM2 (LOC514631), mRNA4e-33btcn723 Bt.1404.1.S1_at, Bt.1404.3.A1_at, Bt.1404.2.S1_at
10504:33052_CL1Contig1-B:rNM_000600Homo sapiens interleukin 6 (interferon, beta 2) (IL6), mRNANM_173923Bos taurus interleukin 6 (interferon, beta 2) (IL6), mRNA1e-30btcn32828, DV781595 Bt.3686.1.S1_at Bt.3686.1.S1_at
10507:5715_CL8Contig1-B:rNM_001031710, NM_018846Homo sapiens kelch-like 7 (Drosophila) (KLHL7), transcript variant 2, mRNAXM_871713PREDICTED: Bos taurus similar to SBBI26 protein isoform 1, transcript variant 2 (LOC534697), mRNA4e-33btcn32830, btcn32829 Bt.16464.1.A1_at Bt.16464.1.A1_at
10508:11158_CL2Contig1-B:fNM_007342Homo sapiens nucleoporin like 2 (NUPL2), mRNAXM_589104PREDICTED: Bos taurus similar to nucleoporin like 2 (LOC511715), mRNA4e-33btcn32817 Bt.19401.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10509:13346_CL1Contig1-B:fNM_002510, NM_001005340Homo sapiens glycoprotein (transmembrane) nmb (GPNMB), transcript variant 2, mRNANM_001038065Bos taurus glycoprotein (transmembrane) nmb (GPNMB), mRNA4e-33CB166964, btcn32827 Bt.9807.2.S1_at Bt.9807.3.S1_at, Bt.9807.1.S1_at, Bt.9807.2.S1_at
1050:34416_17889555-A:rNM_181533Homo sapiens chromosome 14 open reading frame 29 (C14orf29), transcript variant 2, mRNABM253956 Bt.10994.1.S1_at (1719 bases away)
10510:14581_29405342-B:fNM_138446Homo sapiens chromosome 7 open reading frame 30 (C7orf30), mRNAXM_872409PREDICTED: Bos taurus hypothetical LOC509253, transcript variant 3 (LOC509253), mRNA4e-33CO892616, btcn32818, btcn32819, CO892461, btcn32824 Bt.9205.1.A1_at Bt.9205.1.A1_at Bt.29214.1.A1_at, Bt.9205.1.A1_at, Bt.11580.1.S1_at Bt.9205.1.A1_at Bt.9205.1.A1_at
10511:5832_CL2Contig2-B:fNM_013293Homo sapiens transformer-2 alpha (TRA2A), mRNAXM_873698PREDICTED: Bos taurus similar to RIKEN cDNA G430041M01, transcript variant 13 (LOC534586), mRNA4e-33btcn32809, CV979426, btcn32812, btcn32808 Bt.23556.1.S1_at (1027 bases away) Bt.23556.1.S1_at (3980 bases away) Bt.23556.1.S1_at, Bt.23525.1.S1_at Bt.23556.1.S1_at
10517:8108_CL5Contig2-B:fNM_021151Homo sapiens carnitine O-octanoyltransferase (CROT), mRNANM_177494Bos taurus carnitine O-octanoyltransferase (CROT), mRNA3e-12btcn46844, btcn16138, btcn16140, btcn16139 Bt.4599.1.S1_at Bt.4599.1.S1_at (44382 bases away) Bt.4599.1.S1_at (44382 bases away) Bt.4599.1.S1_at (7586 bases away)
10518:4745_CL1Contig1-B:rNM_021145Homo sapiens cyclin D binding myb-like transcription factor 1 (DMTF1), mRNAXM_874834PREDICTED: Bos taurus similar to cyclin D binding myb-like transcription factor 1, transcript variant 8 (LOC539676), mRNA2e-22btcn46840 Bt.10557.1.S1_at, Bt.13366.1.S1_at
10519:3033_CL1Contig1-B:rNM_024315Homo sapiens chromosome 7 open reading frame 23 (C7orf23), mRNAXM_865723PREDICTED: Bos taurus similar to chromosome 7 open reading frame 23 (LOC614280), mRNA4e-33DV783669, btcn46840 Bt.10557.1.S1_at (1224 bases away) Bt.10557.1.S1_at, Bt.13366.1.S1_at
1051:35840_9921916-A:fNM_052978, NM_015163Homo sapiens tripartite motif-containing 9 (TRIM9), transcript variant 1, mRNADT830198, DY133550, btcn22869 Bt.19791.1.A1_at Bt.19791.1.A1_at Bt.19791.1.A1_at (8508 bases away)
10520:45360_CL138Contig2-B:fNM_021151 (3328 bases away)Homo sapiens carnitine O-octanoyltransferase (CROT), mRNACB434992, CK776859.2, CV976958, CB459919, btcn46846, CB460964 Bt.15958.2.A1_a_at Bt.15958.2.A1_a_at Bt.15958.2.A1_a_at Bt.15958.3.S1_at, Bt.15958.2.A1_a_at Bt.15958.3.S1_at, Bt.15958.2.A1_a_at Bt.15958.3.S1_at, Bt.15958.2.A1_a_at
10522:24881_CL1Contig2-B:fNM_147185, NM_147171, NM_005751Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 2, mRNAXM_613215PREDICTED: Bos taurus similar to A-kinase anchor protein 9 isoform 2 (LOC540801), partial mRNA4e-33btcn17693, CN788659, btcn17694, btcn17696 Bt.1237.2.A1_at, Bt.1237.1.S1_at Bt.1237.2.A1_at Bt.1237.2.A1_at, Bt.1237.1.S1_at Bt.1237.2.A1_at
10523:16878_CL1Contig1-B:rNM_000786Homo sapiens cytochrome P450, family 51, subfamily A, polypeptide 1 (CYP51A1), mRNANM_001025319Bos taurus cytochrome P450, family 51, subfamily A, polypeptide 1 (CYP51), mRNA4e-33btcn17692 Bt.621.1.S1_at
10524:38720_CL1Contig1-B:rNM_194455, NM_194454, NM_001013406, NM_004912, NM_194456Homo sapiens KRIT1, ankyrin repeat containing (KRIT1), transcript variant 2, mRNANM_001001166Bos taurus krit1 protein (CCM1), mRNA4e-33btcn17698 BtAffx.1.17.S1_at
10525:45360_CL903Contig1-B:rNM_152754Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D (SEMA3D), mRNADY116507, btcn41501 Bt.12960.1.S1_at (3423 bases away) Bt.12960.1.S1_at (3933 bases away)
10526:45360_CL1207Contig1-A:fNM_012431Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E (SEMA3E), mRNAXM_615752PREDICTED: Bos taurus similar to semaphorin 3E (LOC535644), mRNA4e-33btcn1375 Bt.18200.1.A1_at (2631 bases away)
10527:10653_CL4Contig1-A:rNM_002069 (93323 bases away)Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 (GNAI1), mRNAXM_589507PREDICTED: Bos taurus similar to Cullin-1 (CUL-1), transcript variant 1 (LOC539792), mRNA4e-33btcn33387 Bt.5546.1.S1_at (92878 bases away)
10528:652_17000270-A:fXM_294370, XM_374627, XM_939789PREDICTED: Homo sapiens guanine nucleotide binding protein, alpha transducing 3 (GNAT3), mRNAXM_594414PREDICTED: Bos taurus similar to Guanine nucleotide-binding protein G(t), alpha-3 subunit (Gustducin alpha-3 chain), transcript variant 1 (LOC516262), mRNA4e-33BM089642 Bt.24061.1.A1_at (193153 bases away)
10529:2807_CL1Contig1-B:rNM_001001547 (5 bases away)Homo sapiens CD36 molecule (thrombospondin receptor) (CD36), transcript variant 2, mRNANM_174010Bos taurus CD36 antigen (CD36), mRNA1e-30btcn33390, BG691683, DV780064, CN793414, btcn33388, DV779070 Bt.5392.1.S1_at (16084 bases away) Bt.5392.1.S1_at (16210 bases away) Bt.5392.1.S1_at (14730 bases away) Bt.5392.1.S1_at (32124 bases away) Bt.5392.1.S1_at Bt.5392.1.S1_at (14736 bases away)
10532:45360_37714215-A:fNM_006379Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C (SEMA3C), mRNAXM_590210PREDICTED: Bos taurus similar to semaphorin 3C (LOC512660), mRNA4e-33CF764996 Bt.27084.1.S1_at (72336 bases away)
10535:45360_CL435Contig1-A:rXM_866398PREDICTED: Bos taurus similar to piccolo (presynaptic cytomatrix protein) (LOC517284), mRNA4e-33
10537:18462_10178655-A:fNM_000722Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 1 (CACNA2D1), mRNAXM_609993PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 2/delta subunit 1 (CACNA2D1), partial mRNA4e-33btcn22992 Bt.13101.1.A1_at, Bt.13101.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10538:12913_CL2Contig1-B:rXM_876450PREDICTED: Bos taurus neuronal cell adhesion molecule, transcript variant 13 (NRCAM), mRNA4e-33
10539:12913_CL1Contig1-B:fNM_015723Homo sapiens patatin-like phospholipase domain containing 8 (PNPLA8), mRNAXM_615600PREDICTED: Bos taurus similar to intracellular membrane-associated calcium-independent phospholipase A2 gamma (LOC535496), mRNA4e-33btcn47222 Bt.3540.1.S1_at (101624 bases away)
1053:44913_10867763-A:fXM_864739PREDICTED: Bos taurus similar to PH domain-containing protein homolog (LOC613696), mRNA7e-32
10540:6354_47689045-A:fNM_016616 (15850 bases away)Homo sapiens thioredoxin domain containing 3 (spermatozoa) (TXNDC3), mRNACN793065 Bt.3540.1.S1_at (64466 bases away)
10541:28141_CL1Contig1-B:rNM_017439 (11171 bases away)Homo sapiens hypothetical protein LOC54103 (LOC54103), mRNAXM_866880PREDICTED: Bos taurus hypothetical protein LOC615147 (LOC615147), mRNA4e-33btcn7543 Bt.16521.2.A1_at, Bt.16521.1.S1_at
10542:4291_CL1Contig2-B:rNM_020879Homo sapiens KIAA1505 protein (KIAA1505), mRNAXM_616787PREDICTED: Bos taurus similar to CG15792-PA, isoform A (LOC536647), mRNA4e-33btcn7541, DT810507 Bt.16521.2.A1_at (2809 bases away) Bt.16521.2.A1_at (4722 bases away)
10543:45360_CL214Contig1-B:fNM_020879, NM_006682Homo sapiens fibrinogen-like 2 (FGL2), mRNAXM_876696PREDICTED: Bos taurus similar to Fibroleukin precursor (Fibrinogen-like protein 2) (pT49), transcript variant 3 (LOC511711), mRNA4e-33btcn7545, DV777518 Bt.9202.1.S1_at Bt.9202.1.S1_at
10544:9456_CL7Contig1-B:rNM_002291Homo sapiens laminin, beta 1 (LAMB1), mRNAXM_598260PREDICTED: Bos taurus similar to Laminin beta-1 chain precursor (Laminin B1 chain) (LOC520030), partial mRNA4e-33DN531058, AV598700 Bt.1742.1.S1_at (47870 bases away) Bt.1742.1.S1_at (52306 bases away)
10545:9456_CL2Contig1-B:fNM_002291Homo sapiens laminin, beta 1 (LAMB1), mRNAXM_598260PREDICTED: Bos taurus similar to Laminin beta-1 chain precursor (Laminin B1 chain) (LOC520030), partial mRNA4e-33btcn38559.1, btcn38559 Bt.1742.1.S1_at Bt.1742.1.S1_at
10546:3509_CL1Contig1-B:rNM_000108Homo sapiens dihydrolipoamide dehydrogenase (DLD), mRNAXM_876992PREDICTED: Bos taurus similar to Dihydrolipoyl dehydrogenase, mitochondrial precursor (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein), transcript variant 4 (LOC533910), mRNA4e-33btcn38561, DV776641, DV777601 Bt.9965.1.S1_at, Bt.27889.1.S1_at Bt.9965.1.S1_at Bt.9965.1.S1_at
10547:15894_CL1Contig1-A:fNM_002736Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNANM_174649Bos taurus protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNA3e-28btcn1166 Bt.462.1.S1_at
10548:14288_CL1Contig2-B:rNM_012257Homo sapiens HMG-box transcription factor 1 (HBP1), mRNAXM_614188PREDICTED: Bos taurus similar to HMG-box transcription factor 1 (LOC534424), mRNA4e-33btcn1169, btcn1177 Bt.6208.1.A1_at, Bt.12412.1.S1_at, Bt.10330.1.S1_at Bt.10330.1.S1_at
10549:8178_CL1Contig1-B:rNM_006348, NM_181733Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 1, mRNAbtcn1176 Bt.6208.1.A1_at (10213 bases away)
1054:44913_CL2Contig1-A:fNM_025201Homo sapiens pleckstrin homology domain containing, family Q member 1 (PLEKHQ1), mRNAXM_864739PREDICTED: Bos taurus similar to PH domain-containing protein homolog (LOC613696), mRNA4e-33btcn32126, AM030501 Bt.4588.1.S1_at Bt.4588.1.S1_at
10550:7442_CL1Contig1-A:rNM_006348, NM_005295, NM_181733Homo sapiens G protein-coupled receptor 22 (GPR22), mRNAbtcn1175 Bt.13512.1.S1_at (76000 bases away)
10551:8178_CL2Contig1-A:fNM_006348, NM_181733Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 1, mRNAXM_867137PREDICTED: Bos taurus similar to component of oligomeric golgi complex 5 isoform 1 (LOC615351), mRNA4e-33btcn1171 Bt.13512.1.S1_at (14756 bases away)
10552:34320_CL2Contig2-B:rNM_181581 (181 bases away)Homo sapiens dihydrouridine synthase 4-like (S. cerevisiae) (DUS4L), mRNAXM_588263PREDICTED: Bos taurus similar to dihydrouridine synthase 4-like (LOC511017), mRNA4e-33btcn1164 Bt.13512.1.S1_at, Bt.13512.2.S1_at
10553:7307_CL2Contig1-B:rNM_001008405, NM_001008406, NM_018844Homo sapiens B-cell receptor-associated protein 29 (BCAP29), transcript variant 2, mRNANM_001038075Bos taurus similar to B-cell receptor-associated protein 29 (BCR-associated protein Bap29) (MGC133766), mRNA4e-33AM017532, btcn1161 Bt.6358.1.S1_at Bt.6358.1.S1_at
10555:38776_42580101-C:fNM_000441Homo sapiens solute carrier family 26, member 4 (SLC26A4), mRNAXM_608706PREDICTED: Bos taurus similar to pendrin (LOC530241), mRNA4e-33CK726587 Bt.21061.1.A1_at (33629 bases away)
10556:15225_58764596-A:rNM_024814Homo sapiens Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (CBLL1), mRNAXM_602459PREDICTED: Bos taurus similar to Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1, transcript variant 1 (LOC524139), mRNA7e-32btcn1183 Bt.19867.1.A1_at (1779 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10557:38776_CL5Contig1-A:fNM_000111Homo sapiens solute carrier family 26, member 3 (SLC26A3), mRNAXM_877467PREDICTED: Bos taurus similar to Chloride anion exchanger (DRA protein) (Down-regulated in adenoma) (Solute carrier family 26 member 3), transcript variant 3 (LOC512856), mRNA3e-28CK948200, btcn1179 Bt.27559.1.A1_at (9966 bases away) Bt.27559.1.A1_at (3872 bases away)
10558:2877_62799089-A:fXM_374435 (4432 bases away)PREDICTED: Homo sapiens hypothetical protein LOC136288 (LOC136288), mRNADN515071 (4415 bases away)
10559:4653_CL1Contig1-A:fNM_145032, NM_001031692, NM_005824Homo sapiens leucine rich repeat containing 17 (LRRC17), transcript variant 2, mRNAbtcn36623, btcn36624 Bt.4886.1.A1_at (15678 bases away) Bt.4886.1.A1_at
1055:14616_CL1Contig1-B:rNM_007361Homo sapiens nidogen 2 (osteonidogen) (NID2), mRNAXM_600125PREDICTED: Bos taurus similar to Nidogen-2 precursor (NID-2) (Osteonidogen) (LOC521854), mRNA4e-33btcn175, DN533991, DV781275, DV776675 Bt.16087.1.S1_at Bt.16087.1.S1_at (1070 bases away) Bt.16087.1.S1_at Bt.16087.1.S1_at
10561:33151_CL1Contig1-A:rNM_206884 (51063 bases away)Homo sapiens solute carrier family 26, member 5 (prestin) (SLC26A5), transcript variant c, mRNAXM_613910PREDICTED: Bos taurus similar to Reelin precursor (LOC534218), partial mRNA4e-33btcn3194.3 Bt.14565.1.A1_at
10562:14109_CL2Contig2-B:fNM_004279Homo sapiens peptidase (mitochondrial processing) beta (PMPCB), nuclear gene encoding mitochondrial protein, mRNANM_001034613Bos taurus peptidase (mitochondrial processing) beta (PMPCB), mRNA4e-33btcn3198, btcn3196, DV906501.1 Bt.9797.1.S1_at Bt.9797.1.S1_at, Bt.8333.1.S1_at, Bt.29431.1.A1_at Bt.9797.1.S1_at
10563:1272_CL3Contig2-B:rNM_001015639Bos taurus proteasome (prosome, macropain) 26S subunit, ATPase 2 (PSMC2), mRNA4e-33
10565:43228_CL2Contig1-B:rNM_182931, NM_018682Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) (MLL5), transcript variant 2, mRNAXM_878281PREDICTED: Bos taurus similar to myeloid/lymphoid or mixed-lineage leukemia 5, transcript variant 8 (LOC539121), mRNA4e-33btcn28448 Bt.24691.1.A1_at
10566:11936_CL3Contig1-B:rNM_182691, NM_182692Homo sapiens SFRS protein kinase 2 (SRPK2), transcript variant 2, mRNAXM_590213PREDICTED: Bos taurus similar to SFRS protein kinase 2 isoform b (LOC539897), mRNA4e-33btcn28441, btcn28442, CK832624, btcn28443 Bt.24462.1.S1_at Bt.24462.1.S1_at (256 bases away) Bt.24462.1.S1_at (224 bases away) Bt.24462.1.S1_at
10568:28363_CL1Contig1-A:fNM_005045, NM_173054Homo sapiens reelin (RELN), transcript variant 1, mRNAXM_618382PREDICTED: Bos taurus reelin (RELN), partial mRNA4e-33btcn3194 Bt.12135.1.S1_at (480382 bases away)
10569:16983_CL1Contig1-A:fNM_002553Homo sapiens origin recognition complex, subunit 5-like (yeast) (ORC5L), transcript variant 1, mRNAbtcn37507.1, btcn42111 Bt.12578.1.A1_at (129 bases away) Bt.12578.1.A1_at
1056:8920_CL1Contig1-B:rNM_016039Homo sapiens chromosome 14 open reading frame 166 (C14orf166), mRNANM_001035280Bos taurus similar to Protein C14orf166 (MGC127223), mRNA4e-33DV778807, DV775386, DV779711, DT843696, DV781378, btcn176 Bt.3055.1.S1_at Bt.3055.1.S1_at Bt.16087.1.S1_at, Bt.3055.1.S1_at Bt.3055.1.S1_at Bt.3055.1.S1_at Bt.3055.1.S1_at
10570:7327_CL2Contig1-B:rNM_021930 (76706 bases away)Homo sapiens RAD50 interactor 1 (RINT1), mRNAXM_614069PREDICTED: Bos taurus similar to Ataxin 7-like protein 1 (LOC534332), partial mRNA4e-33btcn41155 Bt.27534.1.S1_at, Bt.11474.1.A1_at
10571:3471_62118317-B:rNM_021930Homo sapiens RAD50 interactor 1 (RINT1), mRNAXM_587859PREDICTED: Bos taurus similar to Rad50-interacting protein 1 (LOC510686), mRNA1e-30btcn41151, CB439797 Bt.27031.1.A1_at Bt.27031.1.A1_at
10572:2963_9725580-B:rNM_019042Homo sapiens pseudouridylate synthase 7 homolog (S. cerevisiae) (PUS7), mRNAXM_867506PREDICTED: Bos taurus similar to Hypothetical pseudouridine synthase KIAA1897 (LOC615644), mRNA4e-33DN520418, btcn41158, DN517695, btcn41157 Bt.28327.1.A1_at (34872 bases away) Bt.28327.1.A1_at (33576 bases away) Bt.28327.1.A1_at (34845 bases away) Bt.28327.1.A1_at (7404 bases away)
10573:2963_CL1Contig1-B:rNM_019042Homo sapiens pseudouridylate synthase 7 homolog (S. cerevisiae) (PUS7), mRNAXM_600819PREDICTED: Bos taurus similar to Hypothetical pseudouridine synthase KIAA1897 (LOC522534), mRNA4e-33btcn41153, btcn41154 Bt.2503.1.S1_at, Bt.28327.1.A1_at Bt.28327.1.A1_at
10577:11936_CL1Contig2-B:rNM_182691, NM_182692Homo sapiens SFRS protein kinase 2 (SRPK2), transcript variant 2, mRNAXM_582315PREDICTED: Bos taurus similar to serine/arginine-rich protein specific kinase 2 (LOC505945), mRNA4e-33DV908332, btcn41147 Bt.20106.1.S1_at Bt.20106.1.S1_at
10578:19753_CL1Contig1-B:rXM_940673, XM_929247, NM_005746Homo sapiens pre-B-cell colony enhancing factor 1 (PBEF1), mRNAXM_878444PREDICTED: Bos taurus similar to Nicotinamide phosphoribosyltransferase (NAmPRTase) (Nampt) (Pre-B-cell colony-enhancing factor 1 homolog) (PBEF), transcript variant 4 (LOC520472), mRNA4e-33btcn9833 Bt.1543.1.A1_at
10579:4390_CL1Contig1-B:fNM_182715, NM_006754Homo sapiens synaptophysin-like 1 (SYPL1), transcript variant 1, mRNAXM_867607PREDICTED: Bos taurus similar to Synaptophysin-like protein (Pantophysin) (LOC615728), mRNA4e-33btcn9830 Bt.21168.1.A1_at, Bt.27131.1.S1_at
1057:11317_CL1Contig2-A:fNM_053064Homo sapiens guanine nucleotide binding protein (G protein), gamma 2 (GNG2), mRNANM_174072Bos taurus guanine nucleotide binding protein (G protein), gamma 2 (GNG2), mRNA4e-33DT815956, btcn172 Bt.4586.1.S1_at Bt.16555.1.A1_at, Bt.4586.1.S1_at, Bt.22349.2.S1_at, Bt.22349.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10580:7327_CL1Contig1-B:rNM_001035407Bos taurus ataxin 7-like 4 (ATXN7L4), mRNA2e-32
10581:2614_CL2Contig1-A:rNM_002649Homo sapiens phosphoinositide-3-kinase, catalytic, gamma polypeptide (PIK3CG), mRNAXM_608463PREDICTED: Bos taurus similar to phosphoinositide-3-kinase, catalytic, gamma polypeptide, transcript variant 1 (LOC530001), mRNA1e-30btcn33622 Bt.6786.1.S1_at (2410 bases away)
10582:15474_49411820-A:fAJ679233
10584:45360_CL514Contig1-B:fNM_000492Homo sapiens cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7) (CFTR), mRNANM_174018Bos taurus cystic fibrosis transmembrane conductance regulator (CFTR), mRNA6e-26btcn29339 Bt.468.1.S1_at
10585:16586_CL2Contig1-B:fNM_130768Homo sapiens ankyrin repeat, SAM and basic leucine zipper domain containing 1 (ASZ1), mRNANM_174063Bos taurus ankyrin repeat, SAM and basic leucine zipper domain containing 1 (ASZ1), mRNA4e-33btcn29340 Bt.9563.1.S1_at
10586:653_9744958-A:fNM_003391Homo sapiens wingless-type MMTV integration site family member 2 (WNT2), mRNANM_001013001Bos taurus wingless-type MMTV integration site family member 2 (WNT2), mRNA4e-33AV609288 Bt.9563.1.S1_at (30463 bases away)
10587:45360_CL1210Contig1-B:fXM_374435 (2310 bases away)PREDICTED: Homo sapiens hypothetical protein LOC136288 (LOC136288), mRNAXM_864820PREDICTED: Bos taurus hypothetical protein LOC614195, transcript variant 2 (LOC614195), mRNA4e-33DY149533.61, btcn31048, BM086861 Bt.22367.1.S1_at, Bt.1196.1.A1_at Bt.22367.1.S1_at Bt.22367.1.S1_at
10588:1035_CL1Contig1-B:fNM_006136Homo sapiens capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNANM_001012998Bos taurus capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNA4e-33btcn52133, DV776851, DV779526, AJ813583, DV880964, DV794522 Bt.13391.1.S1_at Bt.13391.1.S1_at (4544 bases away) Bt.13391.1.S1_at (652 bases away) Bt.13391.1.S1_at (653 bases away) Bt.13391.1.S1_at (1826 bases away) Bt.13391.1.S1_at (653 bases away)
10589:5209_CL1Contig2-B:fNM_018412, NM_021908Homo sapiens suppression of tumorigenicity 7 (ST7), transcript variant a, mRNANM_173961Bos taurus suppression of tumorigenicity 7 (ST7), mRNA4e-33CV977664, btcn19293, btcn19292 Bt.6033.1.S1_at Bt.6033.1.S1_at Bt.6033.1.S1_at
10590:34974_CL24Contig1-B:fNM_000245Homo sapiens met proto-oncogene (hepatocyte growth factor receptor) (MET), mRNANM_001012999Bos taurus HGF receptor c-Met (c-met), mRNA4e-33btcn43695 Bt.13084.1.S1_at
10591:31672_CL1Contig3-B:fNM_001753Homo sapiens caveolin 1, caveolae protein, 22kDa (CAV1), mRNANM_174004Bos taurus caveolin 1, caveolae protein, 22kDa (CAV1), mRNA4e-33btcn43690, DV793607, btcn43691, btcn43692 Bt.2230.1.S2_at, Bt.2230.1.S1_at, Bt.3478.1.A1_s_at Bt.2230.1.S1_at Bt.2230.1.S1_at Bt.2230.1.S1_at
10592:31672_CL3Contig1-B:rNM_198212, NM_001233Homo sapiens caveolin 2 (CAV2), transcript variant 1, mRNANM_001007808Bos taurus caveolin 2 (CAV2), mRNA4e-33CN788304, btcn43694, DV777916 Bt.13989.2.S1_at Bt.13989.3.S1_at, Bt.13989.1.A1_at, Bt.13989.2.S1_at Bt.13989.2.S1_at
10593:2077_CL1Contig1-A:rNM_022484Homo sapiens transmembrane protein 168 (TMEM168), mRNAXM_614433PREDICTED: Bos taurus hypothetical LOC541075, transcript variant 1 (LOC541075), mRNA4e-33btcn19200 Bt.28259.1.S1_at (51427 bases away)
10594:12706_10168744-A:fNM_182597 (6375 bases away)Homo sapiens hypothetical protein FLJ39575 (FLJ39575), mRNABE754752 Bt.14054.1.A1_at (8650 bases away)
10595:29020_CL1Contig1-A:fNM_001550 (42 bases away)Homo sapiens interferon-related developmental regulator 1 (IFRD1), transcript variant 1, mRNAbtcn19196 Bt.14054.1.A1_at, Bt.14054.2.S1_at
10596:45360_CL253Contig1-B:rNM_021994Homo sapiens zinc finger protein 277 (ZNF277), mRNAXM_585471PREDICTED: Bos taurus similar to zinc finger protein (C2H2 type) 277 (LOC508663), partial mRNA4e-33btcn19197, DN288368 Bt.14054.2.S1_at (103613 bases away) Bt.14054.2.S1_at (103124 bases away)
10597:19602_15375608-A:fNM_152556Homo sapiens hypothetical protein FLJ31818 (FLJ31818), mRNAXM_581843PREDICTED: Bos taurus hypothetical LOC538658 (LOC538658), partial mRNA9e-22BI534500, DY111562 Bt.28259.1.S1_at (74974 bases away) Bt.28259.1.S1_at (75301 bases away)
10598:34983_CL6Contig1-B:fNM_014705Homo sapiens dedicator of cytokinesis 4 (DOCK4), mRNAbtcn27806, CB431908 Bt.14054.2.S1_at (644806 bases away) Bt.14054.2.S1_at (645427 bases away)
10599:9631_CL1Contig1-B:fNM_018685Homo sapiens anillin, actin binding protein (ANLN), mRNAXM_596461PREDICTED: Bos taurus similar to anillin, actin binding protein (scraps homolog, Drosophila) (LOC518274), mRNA4e-33btcn44380 Bt.4995.2.S1_at, Bt.4995.1.A1_at
1059:6462_CL1Contig1-B:fNM_001042481, NM_152330Homo sapiens FERM domain containing 6 (FRMD6), transcript variant 2, mRNAXM_864752PREDICTED: Bos taurus similar to FERM domain containing protein 6, transcript variant 2 (LOC530910), mRNA4e-33btcn179.1 Bt.28695.1.S1_at (8386 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
105:7681_6987102-A:fNM_001025205, NM_004068Homo sapiens adaptor-related protein complex 2, mu 1 subunit (AP2M1), transcript variant 1, mRNANM_001034523Bos taurus similar to adaptor-related protein complex 2, mu 1 subunit isoform b (MGC128246), mRNA4e-33btcn12524, AW445340, btcn12527, DV934565, DN286560, btcn12523, CB436119 Bt.7552.1.S1_at Bt.7552.1.S1_at Bt.7552.1.S1_at Bt.7552.1.S1_at Bt.7552.1.S1_at Bt.7552.1.S1_at Bt.7552.1.S1_at
10600:5871_CL1Contig2-B:fNM_001637Homo sapiens acyloxyacyl hydrolase (neutrophil) (AOAH), mRNAbtcn44377 Bt.18962.1.A1_at
10601:4403_CL1Contig1-B:fXM_940258, XM_380018, XM_377955PREDICTED: Homo sapiens ankyrin repeat and IBR domain containing 1 (ANKIB1), mRNAXM_581455PREDICTED: Bos taurus similar to Ankyrin repeat and IBR domain containing protein 1 (LOC505204), partial mRNA4e-33DN540923, btcn12878 Bt.18757.1.S1_at (39320 bases away) Bt.18757.1.S1_at (39312 bases away)
10602:6843_12121711-A:fXM_940258 (17569 bases away)PREDICTED: Homo sapiens ankyrin repeat and IBR domain containing 1 (ANKIB1), mRNAbtcn12879 Bt.18757.1.S1_at (6487 bases away)
10604:20121_CL1Contig1-A:r
10605:1024_CL1Contig1-B:fNM_000466Homo sapiens peroxisome biogenesis factor 1 (PEX1), mRNAXM_582113PREDICTED: Bos taurus similar to peroxisome biogenesis factor 1 (LOC505771), mRNA4e-33btcn12881 Bt.20771.1.A1_at, Bt.20771.2.S1_at
10607:4429_CL12Contig1-A:rNM_018334Homo sapiens leucine rich repeat neuronal 3 (LRRN3), mRNAXM_588627PREDICTED: Bos taurus similar to leucine rich repeat neuronal 3 (LOC539665), mRNA1e-30btcn4932, CB429718 Bt.9748.1.S1_at (366118 bases away) Bt.9748.1.S1_at (365586 bases away)
10609:11363_CL1Contig1-A:rNM_032549 (362610 bases away)Homo sapiens IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) (IMMP2L), mRNAbtcn4928 Bt.28490.1.S1_at
1060:12272_45483231-A:fNM_203466, NM_203467, NM_152329Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 5 (PPIL5), transcript variant 1, mRNAXM_590293PREDICTED: Bos taurus similar to Peptidylprolyl isomerase-like 5 (LRR-repeat protein 1) (LRR-1) (4-1BB-mediated signaling molecule) (4-1BBlrr), transcript variant 1 (LOC512724), mRNA4e-33btcn38829.1 Bt.28852.1.S1_at (9081 bases away)
10610:25578_CL1Contig1-B:rXM_581793PREDICTED: Bos taurus similar to forkhead box P2 (LOC505502), mRNA4e-33
10612:8992_CL1Contig1-A:rNM_007102 (4047 bases away)Homo sapiens guanylate cyclase activator 2B (uroguanylin) (GUCA2B), mRNAXM_610296PREDICTED: Bos taurus similar to guanylate cyclase activator 2A (LOC531794), mRNA4e-33btcn43878 Bt.28070.1.S1_at
10613:22789_18530449-A:fNM_007102 (1831 bases away)Homo sapiens guanylate cyclase activator 2B (uroguanylin) (GUCA2B), mRNAXM_593722PREDICTED: Bos taurus similar to Guanylate cyclase activator 2B precursor (LOC515664), mRNA4e-33BM446293 Bt.28070.1.S1_at (3587 bases away)
10614:9941_CL1Contig1-A:rNM_001042616, NM_032906Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class Y (PIGY), transcript variant 1, mRNANM_001038102Bos taurus hypothetical LOC514374 (MGC134017), mRNA4e-33DV783627, DV775673, btcn43882 Bt.3288.1.A1_at Bt.3288.1.A1_at Bt.3288.1.A1_at
10615:35840_CL5Contig1-B:rNM_016323Homo sapiens hect domain and RLD 5 (HERC5), mRNAXM_592214PREDICTED: Bos taurus similar to HECT domain and RCC1-like domain protein 5 (Cyclin-E binding protein 1) (LOC514373), mRNA4e-33btcn43880 Bt.3288.1.A1_at (4010 bases away)
10616:35840_CL4Contig1-B:fNM_017912 (2253 bases away)Homo sapiens hect domain and RLD 6 (HERC6), mRNAXM_605913PREDICTED: Bos taurus similar to hect domain and RLD 6 isoform a (LOC527520), mRNA3e-28btcn43883 Bt.22058.1.A1_at (22309 bases away)
10617:7407_38279438-A:fNM_012328 (140 bases away)Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 9 (DNAJB9), mRNAXM_866142PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily B, member 9 (LOC614588), mRNA4e-33CF930319 Bt.26818.1.S1_at (2031 bases away)
10618:30417_CL10Contig1-A:fNM_182529Homo sapiens THAP domain containing 5 (THAP5), mRNAXM_600980PREDICTED: Bos taurus similar to THAP domain containing 8 (LOC522695), mRNA4e-33btcn26758, DT831041, btcn26761, DV821773 Bt.26818.1.S1_at (4574 bases away) Bt.26818.1.S1_at (4468 bases away) Bt.26818.1.S1_at (4492 bases away) Bt.26818.1.S1_at (4447 bases away)
10619:28038_28293604-A:fNM_182529Homo sapiens THAP domain containing 5 (THAP5), mRNAXM_866177PREDICTED: Bos taurus similar to THAP domain containing 5 (LOC614615), mRNA4e-33btcn26758, DT831041, CB223090 Bt.26818.1.S1_at (4574 bases away) Bt.26818.1.S1_at (4468 bases away) Bt.26818.1.S1_at (9209 bases away)
1061:13707_CL1Contig3-A:rNM_001001Homo sapiens ribosomal protein L36a-like (RPL36AL), mRNAXM_874623PREDICTED: Bos taurus similar to large subunit ribosomal protein L36a, transcript variant 3 (LOC613592), mRNA4e-33btcn38818, btcn37916.1, btcn38823.1 Bt.28852.1.S1_at (5040 bases away) Bt.28852.1.S1_at (6267 bases away) Bt.28852.1.S1_at (5396 bases away)
10620:2475_10282792-A:fNM_014800Homo sapiens engulfment and cell motility 1 (ELMO1), transcript variant 1, mRNAXM_866362PREDICTED: Bos taurus similar to engulfment and cell motility 1 isoform 1 (LOC614761), mRNA4e-33btcn44039, DY088646 Bt.28348.1.S1_at Bt.28348.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10621:2475_CL7Contig1-B:fNM_014800Homo sapiens engulfment and cell motility 1 (ELMO1), transcript variant 1, mRNAXM_600488PREDICTED: Bos taurus similar to engulfment and cell motility 1 isoform 1 (LOC522213), mRNA4e-33btcn44038, BP110504, DV891643 Bt.26235.1.A1_at (87707 bases away) Bt.26235.1.A1_at Bt.3555.1.S1_at, Bt.26235.1.A1_at, Bt.16985.2.S1_at
10622:877_58064849-B:fNM_022900Homo sapiens CAS1 domain containing 1 (CASD1), mRNAXM_611653PREDICTED: Bos taurus similar to O-acetyltransferase, transcript variant 1 (LOC532541), mRNA4e-33CB466891, DT885172, btcn36853, btcn36854 Bt.19599.1.A1_at (138 bases away) Bt.19599.1.A1_at (346 bases away) Bt.19599.1.A1_at Bt.12257.1.S1_at, Bt.20623.1.A1_at, Bt.19599.1.A1_at
10623:32212_16998623-A:fXM_940996 (2816 bases away)PREDICTED: Homo sapiens similar to T-box 20 isoform a (LOC651774), mRNAXM_587044PREDICTED: Bos taurus similar to T-box 20 isoform a (LOC539419), mRNA4e-33btcn10507 Bt.24191.1.A1_at (271279 bases away)
10624:12797_29394997-A:rXM_866687PREDICTED: Bos taurus similar to tumor suppressor candidate 3 (LOC615007), mRNA4e-33btcn29080.1, DV913192, btcn10498, CB531868 Bt.19927.1.A1_at Bt.19927.1.A1_at Bt.19927.1.A1_at Bt.19927.1.A1_at
10625:42134_CL2Contig1-B:fNM_022373Homo sapiens HERPUD family member 2 (HERPUD2), mRNAXM_873203PREDICTED: Bos taurus similar to CG14536-PA, isoform A, transcript variant 6 (LOC512265), mRNA4e-33btcn10500, DV776696 Bt.16348.2.S1_at, Bt.16348.1.A1_at Bt.16348.2.S1_at, Bt.16348.1.A1_at
10626:18419_CL4Contig1-B:rXM_935751, XM_929776, XM_933954, XM_941925, XM_936715, XM_927271, XM_935484, XM_376342, NM_001011553, XM_935783, XM_938728, XM_935490, NR_003034, XM_933956, XM_927206, NM_001788Homo sapiens septin 7 (SEPT7), transcript variant 1, mRNANM_001001168Bos taurus cell division cycle 10 (CDC10), mRNA4e-33btcn10494, DV778790 Bt.6830.1.S1_at Bt.6830.1.S1_at (7199 bases away)
10627:21512_CL1Contig2-B:rNM_030636Homo sapiens KIAA1706 protein (KIAA1706), mRNANM_001034409Bos taurus hypothetical LOC511767 (MGC128525), mRNA4e-33btcn10504 Bt.26867.2.S1_a_at
10628:2267_9022288-A:fNM_015314Homo sapiens KIAA0895 protein (KIAA0895), mRNAXM_606207PREDICTED: Bos taurus hypothetical LOC527805 (LOC527805), partial mRNA4e-33BE237570 Bt.26867.2.S1_a_at (60115 bases away)
1062:14596_CL2Contig1-A:rNM_001015883, NM_002408Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT2), transcript variant 1, mRNAXM_590294PREDICTED: Bos taurus similar to Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (Mannoside acetylglucosaminyltransferase 2) (N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase II) (Beta-1,2-N-acetylglucosaminyltransferase II)... (LOC539918), mRNA4e-33CB425450.1, btcn38822 Bt.28852.1.S1_at (3649 bases away) Bt.28852.1.S1_at (2334 bases away)
10630:7450_CL2Contig1-B:rNM_012322Homo sapiens LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM5), mRNAXM_866861PREDICTED: Bos taurus similar to LSM5 homolog, U6 small nuclear RNA associated (LOC615136), mRNA4e-33btcn29280, btcn29282, btcn29283, btcn29281, btcn29279 Bt.19529.1.A1_at, Bt.24949.1.S1_at Bt.24949.1.S1_at Bt.19529.1.A1_at, Bt.24949.1.S1_at Bt.19529.1.A1_at, Bt.24949.1.S1_at Bt.19529.1.A1_at, Bt.24949.1.S1_at
10631:7968_CL1Contig1-B:fNM_015060Homo sapiens KIAA0241 (KIAA0241), mRNAXM_613802PREDICTED: Bos taurus similar to CG11178-PB, isoform B (LOC534141), mRNA4e-33btcn29288, AJ816314 Bt.25820.1.A1_at (4893 bases away) Bt.25820.1.A1_at (15456 bases away)
10632:6390_CL2Contig1-A:rNM_015483Homo sapiens kelch repeat and BTB (POZ) domain containing 2 (KBTBD2), mRNAXM_592838PREDICTED: Bos taurus similar to Kelch repeat and BTB domain containing protein 2 (BTB and kelch domain containing protein 1) (LOC514920), mRNA4e-33btcn29284 Bt.28701.1.S1_at
10634:20096_61756646-B:fNM_007270, NM_182827Homo sapiens FK506 binding protein 9, 63 kDa (FKBP9), mRNAXM_613853PREDICTED: Bos taurus similar to FK506 binding protein 9 (LOC534182), mRNA4e-33btcn29277, CR454487 Bt.4882.1.S1_at Bt.4882.1.S1_at
10635:8497_CL2Contig1-B:rNM_016489, NM_001002010, NM_001002009Homo sapiens 5'-nucleotidase, cytosolic III (NT5C3), transcript variant 3, mRNANM_001037597Bos taurus 5'-nucleotidase, cytosolic III (NT5C3), mRNA4e-33btcn29286, btcn43055 Bt.21803.1.A1_at Bt.21803.1.A1_at (2844 bases away)
10636:15030_CL1Contig2-B:rNM_203288Homo sapiens retinitis pigmentosa 9 (autosomal dominant) (RP9), mRNAXM_867088PREDICTED: Bos taurus similar to Retinitis pigmentosa 9 protein homolog (Pim-1 associated protein) (PAP-1) (LOC615312), mRNA4e-33BF653100, DV922158, btcn29273 Bt.22610.1.S1_at Bt.22610.1.S1_at Bt.22610.1.S1_at
10637:2043_CL1Contig1-B:rXM_938743, XM_371891, XM_935726PREDICTED: Homo sapiens dpy-19-like 1 (C. elegans) (DPY19L1), mRNAXM_616640PREDICTED: Bos taurus similar to dpy-19-like 1, like (LOC536508), mRNA4e-33btcn4591, btcn4592 Bt.24191.1.A1_at Bt.24191.1.A1_at (154 bases away)
10638:14394_61734341-A:fNM_207172, NM_207173Homo sapiens neuropeptide S receptor 1 (NPSR1), transcript variant 1, mRNAXM_874073PREDICTED: Bos taurus similar to G protein-coupled receptor 154 isoform B, transcript variant 3 (LOC519486), mRNA4e-33CR853178 Bt.24191.1.A1_at (51686 bases away)
1063:21955_CL2Contig1-A:fNM_018139Homo sapiens chromosome 14 open reading frame 104 (C14orf104), mRNAXM_614240PREDICTED: Bos taurus similar to Protein C14orf104 (LOC534465), mRNA4e-33btcn38819, btcn38821 Bt.28852.1.S1_at (1573 bases away) Bt.28852.1.S1_at
10640:22906_CL3Contig1-B:rNM_133468Homo sapiens BMP binding endothelial regulator (BMPER), mRNAXM_613755PREDICTED: Bos taurus similar to BMP-binding endothelial regulator precursor protein (LOC534101), mRNA3e-28btcn26648 Bt.2739.1.A1_at (75348 bases away)
10641:18432_CL2Contig1-B:rNM_198098Homo sapiens aquaporin 1 (Colton blood group) (AQP1), mRNANM_174702Bos taurus aquaporin 1 (Aqp1), mRNA4e-33btcn53272 Bt.1525.1.S2_at, Bt.1525.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10642:4186_45206183-A:fNM_000823, NM_001009824Homo sapiens growth hormone releasing hormone receptor (GHRHR), transcript variant 1, mRNAbtcn53282, AB022597, btcn53283 Bt.4189.1.S1_a_at Bt.4189.1.S1_a_at, Bt.4189.1.S2_a_at Bt.4189.1.S1_a_at, Bt.4189.1.S2_a_at
10643:6163_CL2Contig1-B:fNM_147128Homo sapiens zinc and ring finger 2 (ZNRF2), mRNAXM_867507PREDICTED: Bos taurus similar to zinc finger/RING finger 2 (LOC615645), mRNA4e-33btcn11552 Bt.25679.1.A1_at (4248 bases away)
10646:14251_CL1Contig1-B:fNM_152793Homo sapiens chromosome 7 open reading frame 41 (C7orf41), mRNAXM_867551PREDICTED: Bos taurus hypothetical protein LOC615685 (LOC615685), mRNA4e-33btcn42716 Bt.13798.1.S1_at, Bt.13798.2.S1_at, Bt.16436.3.A1_at, Bt.16436.1.S1_at, Bt.16436.2.A1_at
1064:21955_11704768-A:rNM_018139 (1045 bases away)Homo sapiens chromosome 14 open reading frame 104 (C14orf104), mRNAXM_614240PREDICTED: Bos taurus similar to Protein C14orf104 (LOC534465), mRNA4e-33BF605296 Bt.16886.1.A1_a_at (2385 bases away)
10650:24360_CL1Contig1-B:fNM_015899, NM_032639Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 9 (PLEKHA9), mRNAXM_583652PREDICTED: Bos taurus similar to pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 (LOC538919), mRNA3e-28btcn42715 Bt.25826.1.A1_at
10651:24360_CL2Contig1-A:fNM_015899, NM_032639Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 9 (PLEKHA9), mRNAXM_583652PREDICTED: Bos taurus similar to pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 (LOC538919), mRNA4e-33btcn42729 Bt.25826.1.A1_at (7110 bases away)
10652:20096_61753929-B:fXM_867595PREDICTED: Bos taurus similar to FK506 binding protein 14 precursor (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (22 kDa FK506-binding protein) (FKBP-22) (LOC615718), mRNA4e-33
10656:23666_CL1Contig1-B:fXM_935981, XM_935705, XM_944108, XM_939315, XM_929463, XM_933686PREDICTED: Homo sapiens similar to SH3 domain binding protein CR16, transcript variant 1 (LOC644150), mRNAXM_867648PREDICTED: Bos taurus similar to SH3 domain binding protein CR16 (LOC615758), mRNA4e-33btcn42722, btcn42723 Bt.3560.1.S1_at Bt.3560.1.S1_at
10658:7711_51819402-A:fNM_014766Homo sapiens secernin 1 (SCRN1), mRNAXM_614876PREDICTED: Bos taurus similar to secernin 1 (LOC534933), partial mRNA4e-33DV880686, btcn42717 Bt.28429.1.S1_at (14626 bases away) Bt.3560.1.S1_at (3023 bases away)
1065:6255_CL1Contig1-B:rNM_002692Homo sapiens polymerase (DNA directed), epsilon 2 (p59 subunit) (POLE2), mRNAXM_874797PREDICTED: Bos taurus similar to DNA polymerase epsilon subunit 2, transcript variant 2 (LOC518653), mRNA4e-33btcn38825, CR454884 Bt.28135.1.A1_at, Bt.16886.1.A1_a_at Bt.16886.1.A1_a_at
10660:5165_CL1Contig5-A:rXM_874745PREDICTED: Bos taurus similar to homeobox protein A6, transcript variant 6 (LOC614264), mRNA4e-33
10661:5165_CL1Contig2-B:f
10662:1391_49144305-A:fNM_030661, NM_153632, NM_153631Homo sapiens homeobox A3 (HOXA3), transcript variant 1, mRNAXM_587069PREDICTED: Bos taurus similar to homeobox A3 protein isoform a, transcript variant 1 (LOC509991), mRNA4e-33btcn5498, btcn5499 Bt.16919.1.A1_at, Bt.28155.1.S1_at Bt.16919.1.A1_at
10663:5165_CL8Contig1-A:rNM_006735Homo sapiens homeobox A2 (HOXA2), mRNAXM_875153PREDICTED: Bos taurus similar to homeobox A2 protein, transcript variant 3 (LOC524150), mRNA4e-33btcn5504, btcn5499 Bt.17925.1.A1_at (1078 bases away) Bt.16919.1.A1_at
10665:1616_CL1Contig2-B:fNM_022141Homo sapiens parvin, gamma (PARVG), mRNAXM_582360PREDICTED: Bos taurus similar to parvin, gamma, transcript variant 1 (LOC505984), mRNA4e-33CK835630, btcn5506, btcn5505 Bt.26533.1.S1_at (9735 bases away) Bt.26533.1.S1_at (9720 bases away) Bt.26533.1.S1_at (9622 bases away)
10667:24881_CL2Contig1-A:rNM_147185, NM_147166, NM_147171, NM_005751Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 2, mRNAXM_599034PREDICTED: Bos taurus similar to A-kinase anchor protein 9 (Protein kinase A anchoring protein 9) (PRKA9) (A-kinase anchor protein 450 kDa) (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350) (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein) (Yotiao protein) (... (LOC520784), partial mRNA1e-30btcn11728 Bt.1237.2.A1_at (112160 bases away)
10668:1710_CL2Contig1-A:rNM_006980Homo sapiens mitochondrial transcription termination factor (MTERF), nuclear gene encoding mitochondrial protein, mRNAXM_600466PREDICTED: Bos taurus similar to Transcription termination factor, mitochondrial precursor (mTERF) (Mitochondrial transcription termination factor 1) (LOC522191), mRNA4e-33btcn11729.1 Bt.1237.2.A1_at (166674 bases away)
10669:4409_CL2Contig1-B:fNM_001039936, NM_004067Homo sapiens chimerin (chimaerin) 2 (CHN2), transcript variant 2, mRNAXM_583871PREDICTED: Bos taurus similar to Beta-chimaerin (Beta-chimerin) (Rho-GTPase-activating protein 3) (LOC507285), partial mRNA4e-33btcn28328 Bt.28510.1.S1_at, Bt.20319.1.S1_at
1066:17797_10170417-A:fXM_617292PREDICTED: Bos taurus similar to kelch domain containing 1 (LOC537136), partial mRNA4e-33BE756425.1
10670:20254_37713510-A:fNM_001039936 (24093 bases away)Homo sapiens chimerin (chimaerin) 2 (CHN2), transcript variant 1, mRNAXM_865233PREDICTED: Bos taurus similar to RIKEN cDNA E130201N16, transcript variant 2 (LOC538952), mRNA2e-23DN545374, btcn28332, btcn24679 Bt.9034.1.S1_at Bt.9034.1.S1_at Bt.9034.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10671:21620_47686421-B:fNM_001011666, NM_182899, NM_182898, NM_004904Homo sapiens cAMP responsive element binding protein 5 (CREB5), transcript variant 2, mRNAXM_865288PREDICTED: Bos taurus similar to cAMP responsive element binding protein 5 isoform alpha, transcript variant 6 (LOC534129), mRNA4e-33btcn3145, CN790441 Bt.11625.1.S1_at (13978 bases away) Bt.12202.2.A1_at
10672:37606_6972799-A:fNM_014817Homo sapiens KIAA0644 gene product (KIAA0644), mRNAXM_596185PREDICTED: Bos taurus similar to Insulin-like growth factor binding protein complex acid labile chain precursor (ALS) (LOC518003), mRNA4e-33btcn3154.1 Bt.19571.2.A1_at (109516 bases away)
10673:37606_12125015-A:fNM_014817Homo sapiens KIAA0644 gene product (KIAA0644), mRNAXM_596185PREDICTED: Bos taurus similar to Insulin-like growth factor binding protein complex acid labile chain precursor (ALS) (LOC518003), mRNA4e-33btcn3149.1 Bt.19571.2.A1_at (110689 bases away)
10674:15416_CL1Contig1-B:rNM_000712 (228 bases away)Homo sapiens biliverdin reductase A (BLVRA), mRNAXM_580744PREDICTED: Bos taurus similar to Biliverdin reductase A precursor (Biliverdin-IX alpha-reductase) (BVR A) (LOC504596), mRNA4e-33btcn52296, btcn52295 Bt.5775.1.S1_at (223 bases away) Bt.5775.1.S1_at
10675:881_CL1Contig1-B:rNM_013284Homo sapiens polymerase (DNA directed), mu (POLM), mRNANM_001035286Bos taurus polymerase (DNA directed), mu (POLM), mRNA1e-30btcn52304 Bt.15999.1.S1_at (27507 bases away)
10677:12979_CL1Contig1-B:fNM_001129Homo sapiens AE binding protein 1 (AEBP1), mRNANM_174839Bos taurus AE binding protein 1 (AEBP1), mRNA4e-33btcn52299 Bt.15999.1.S1_at
10678:26284_CL1Contig1-B:rNM_006230Homo sapiens polymerase (DNA directed), delta 2, regulatory subunit 50kDa (POLD2), mRNANM_174428Bos taurus polymerase (DNA directed), delta 2, regulatory subunit 50kDa (POLD2), mRNA3e-31AW425278, btcn52292 Bt.5282.1.S1_at (5075 bases away) Bt.5282.1.S1_at
10679:628_CL5Contig1-A:rXM_585011PREDICTED: Bos taurus similar to myosin light chain 2a (LOC508257), mRNA4e-33btcn52303.1, btcn52301.1, btcn52302.1
1067:6844_CL1Contig2-B:fNM_001014812, NM_032231Homo sapiens family with sequence similarity 96, member A (FAM96A), transcript variant 1, mRNANM_001035110Bos taurus similar to CG30152-PA (MGC127083), mRNA4e-27btcn13120, btcn13118 Bt.745.1.S1_at Bt.745.1.S1_at
10680:1489_9604103-A:fBE484570.1
10681:18718_51813259-A:fNM_172078 (6668 bases away)Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II beta (CAMK2B), transcript variant 2, mRNANM_001035047Bos taurus SNARE protein Ykt6 (YKT6), mRNA4e-33btcn52294, CB448107 Bt.6034.1.S1_at Bt.6034.1.S1_at
10682:1482_CL6Contig1-B:rNM_172078, NM_172079, NM_172083, NM_172081, NM_172080, NM_001220, NM_172082, NM_172084Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II beta (CAMK2B), transcript variant 1, mRNANM_001035357Bos taurus similar to Calcium/calmodulin-dependent protein kinase type II beta chain (CaM-kinase II beta chain) (CaM kinase II beta subunit) (CaMK-II beta subunit) (MGC128545), mRNA1e-30btcn52297 Bt.24548.1.S1_at
10683:2950_29393240-A:rNM_175061Homo sapiens juxtaposed with another zinc finger gene 1 (JAZF1), mRNAXM_868795PREDICTED: Bos taurus similar to juxtaposed with another zinc finger gene 1 (LOC616701), mRNA1e-30btcn23949 Bt.20105.1.A1_at (857 bases away)
10684:44195_CL1Contig2-B:fNM_006024Homo sapiens Tax1 (human T-cell leukemia virus type I) binding protein 1 (TAX1BP1), mRNAXM_615696PREDICTED: Bos taurus similar to Tax1 (human T-cell leukemia virus type I) binding protein 1 (LOC535589), mRNA4e-33btcn23951, btcn23955 Bt.20105.1.A1_at, Bt.20105.2.S1_at, Bt.17392.1.A1_at, Bt.17715.1.A1_at Bt.17392.1.A1_at
10685:44195_CL2Contig1-B:rNM_006024Homo sapiens Tax1 (human T-cell leukemia virus type I) binding protein 1 (TAX1BP1), mRNAXM_615696PREDICTED: Bos taurus similar to Tax1 (human T-cell leukemia virus type I) binding protein 1 (LOC535589), mRNA4e-33btcn23951 Bt.20105.1.A1_at, Bt.20105.2.S1_at, Bt.17392.1.A1_at, Bt.17715.1.A1_at
10686:4768_CL1Contig1-B:fNM_152740Homo sapiens 3-hydroxyisobutyrate dehydrogenase (HIBADH), mRNAXM_589434PREDICTED: Bos taurus similar to 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor (HIBADH) (LOC512002), mRNA1e-27DV785286, DV776297, DV791739, btcn23959 Bt.6171.1.A1_at (8213 bases away) Bt.6171.1.A1_at Bt.6171.1.A1_at (255 bases away) Bt.6171.1.A1_at
10688:5165_CL14Contig1-B:fXM_876576PREDICTED: Bos taurus similar to homeobox protein A9 isoform a, transcript variant 3 (LOC510459), mRNA4e-33
10689:752_CL7Contig2-B:fNM_198833, NM_002640Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 8 (SERPINB8), transcript variant 1, mRNANM_001035287Bos taurus serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 8 (SERPINB8), mRNA4e-33btcn23965, BG691123 Bt.20432.1.S1_at Bt.20432.1.S1_at
1068:2886_CL1Contig1-B:rNM_003099, NM_148955, NM_152826Homo sapiens sorting nexin 1 (SNX1), transcript variant 1, mRNAXM_875324PREDICTED: Bos taurus similar to sorting nexin 1, transcript variant 3 (LOC512029), mRNA4e-33AW461910, AW327188, btcn13124 Bt.23271.1.A1_at, Bt.4070.1.S1_at Bt.4070.1.S1_at Bt.23271.1.A1_at, Bt.4070.1.S1_at
10692:8691_CL2Contig1-B:rNM_013322Homo sapiens sorting nexin 10 (SNX10), mRNAXM_585673PREDICTED: Bos taurus similar to Sorting nexin-10 (LOC508836), mRNA4e-33btcn43715, CO886682, DV786090 Bt.27822.1.A1_at, Bt.27822.2.S1_at Bt.27822.2.S1_at (931 bases away) Bt.27822.2.S1_at (144 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10693:2212_CL1Contig1-A:rNM_001014845Bos taurus neuropeptide Y (NPY), mRNA4e-33
10694:5644_CL1Contig3-B:rNM_198901, NM_003130Homo sapiens sorcin (SRI), transcript variant 1, mRNAXM_876993PREDICTED: Bos taurus similar to Sorcin (22 kDa protein) (CP-22) (V19), transcript variant 3 (LOC508319), mRNA4e-33btcn28264, btcn28268, btcn28267, btcn28263 Bt.15882.3.S1_at, Bt.15882.2.S1_a_at Bt.15882.3.S1_at, Bt.15882.2.S1_a_at Bt.15882.3.S1_at, Bt.15882.2.S1_a_at, Bt.23007.1.A1_at Bt.15882.3.S1_at, Bt.15882.2.S1_a_at
10695:8196_29227337-A:fNM_199136Homo sapiens hypothetical protein MGC72075 (MGC72075), mRNAXM_869454PREDICTED: Bos taurus hypothetical protein LOC617232 (LOC617232), mRNA4e-33btcn4551, btcn28270 Bt.17517.1.S1_at Bt.17517.1.S1_at
10696:11546_CL1Contig1-B:rNM_194326 (28 bases away)Homo sapiens ribosomal protein S19 binding protein 1 (RPS19BP1), mRNAXM_585999PREDICTED: Bos taurus hypothetical LOC509108, transcript variant 7 (LOC509108), mRNA4e-33btcn50559, btcn27248, DV839120 Bt.3077.1.S1_at Bt.3077.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at Bt.3077.1.S1_at, Bt.1132.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at, Bt.1132.2.S1_at
10697:7290_CL1Contig2-A:rXM_946197, XM_928637, XM_942664, NM_182810, XM_933012, NM_001675, XM_946196, XM_932999, XM_946201, XM_933001Homo sapiens activating transcription factor 4 (tax-responsive enhancer element B67) (ATF4), transcript variant 1, mRNANM_001034342Bos taurus similar to activating transcription factor 4 (MGC126973), mRNA4e-33DN516733, btcn50556, CK834018, btcn50557, btcn27248, btcn50558, btcn50554, DV793665, DY130182, DV793745, DV797800, DV797068, DV839120 Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.19161.1.S1_at (147 bases away) Bt.19161.1.S1_at Bt.3077.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.19161.1.S1_at Bt.3077.1.S1_at, Bt.1132.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at, Bt.1132.2.S1_at
10698:6508_11703872-A:fNM_019008Homo sapiens Smith-Magenis syndrome chromosome region, candidate 7-like (SMCR7L), mRNAXM_864076PREDICTED: Bos taurus hypothetical protein LOC613306, transcript variant 2 (LOC613306), mRNA4e-33BF604849, btcn27248, DV839120 Bt.20928.1.S1_at (2622 bases away) Bt.3077.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at Bt.3077.1.S1_at, Bt.1132.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at, Bt.1132.2.S1_at
10699:3190_15776684-B:fNM_014903Homo sapiens neuron navigator 3 (NAV3), mRNAXM_607306PREDICTED: Bos taurus similar to neuron navigator 3 (LOC528870), mRNA4e-33btcn41957 Bt.25031.1.S1_at (203556 bases away)
1069:1374_CL1Contig3-B:fNM_024798Homo sapiens sorting nexin 22 (SNX22), mRNAbtcn13116, AW461747, btcn13117, btcn13114, DV831779 Bt.27810.1.S1_at, Bt.1131.1.S1_at Bt.27810.1.S1_at, Bt.1131.1.S1_at Bt.1131.1.S1_at (21 bases away) Bt.1131.1.S1_at (14 bases away) Bt.1131.1.S1_at (401 bases away)
106:1485_CL2Contig1-B:rNM_004423Homo sapiens dishevelled, dsh homolog 3 (Drosophila) (DVL3), mRNAXM_878923PREDICTED: Bos taurus similar to dishevelled 3, transcript variant 6 (LOC539203), mRNA4e-33btcn12542, btcn12543 Bt.27423.1.S1_at (3092 bases away) Bt.27423.1.S1_at
10700:3627_CL2Contig1-B:rNM_001321Homo sapiens cysteine and glycine-rich protein 2 (CSRP2), mRNANM_001038183Bos taurus cysteine and glycine-rich protein 2 (CSRP2), mRNA4e-33CR852714, btcn41950, btcn41950.1, DV832749 Bt.2262.1.S1_at Bt.2262.1.S1_at Bt.2262.1.S1_at Bt.2262.1.S1_at
10702:45360_CL492Contig1-B:rNM_015336Homo sapiens zinc finger, DHHC-type containing 17 (ZDHHC17), mRNAXM_614891PREDICTED: Bos taurus similar to Huntingtin-interacting protein 14 (Huntingtin-interacting protein 3) (Huntingtin-interacting protein HYPH) (Putative NF-kappa-B-activating protein 205) (Putative MAPK-activating protein PM11) (LOC541172), mRNA4e-33btcn41952 Bt.8869.2.S1_at
10703:12050_CL1Contig2-B:fNM_006825Homo sapiens cytoskeleton-associated protein 4 (CKAP4), mRNAXM_868540PREDICTED: Bos taurus similar to cytoskeleton-associated protein 4 (LOC515784), mRNA4e-33btcn23251, btcn23250, btcn23249 Bt.3071.1.S1_at (530 bases away) Bt.3071.1.S1_at Bt.3071.1.S1_at
10704:13593_CL3Contig1-B:rNM_152772Homo sapiens t-complex 11 (mouse) like 2 (TCP11L2), mRNAXM_614083PREDICTED: Bos taurus similar to CG16721-PA (LOC541012), mRNA4e-33btcn23252 Bt.16875.1.A1_at
10707:36779_10021546-A:fNM_003490, NM_133633Homo sapiens synapsin III (SYN3), transcript variant IIIa, mRNAXM_587881PREDICTED: Bos taurus similar to Synapsin-3 (Synapsin III) (LOC510705), mRNA4e-33BE663262 Bt.18654.2.S1_at (5109 bases away)
10708:793_CL1Contig1-B:rNM_001033024, NM_012179Homo sapiens F-box protein 7 (FBXO7), transcript variant 1, mRNANM_001038059Bos taurus F-box protein 7 (FBXO7), mRNA4e-33btcn27078 Bt.21932.1.S1_at, Bt.11965.1.S1_at
1070:20913_CL5Contig1-B:fNM_001038146Bos taurus casein kinase 1, gamma 1 (CSNK1G1), mRNA4e-33
10710:2424_CL2Contig1-B:rNM_133642, NM_004737Homo sapiens like-glycosyltransferase (LARGE), transcript variant 1, mRNAXM_582913PREDICTED: Bos taurus similar to like-glycosyltransferase (LOC506466), mRNA4e-33btcn44077, AJ815996.1 Bt.29331.1.S1_at Bt.29331.1.S1_at (1378 bases away)
10711:45360_CL25Contig1-A:fNM_133642 (78909 bases away)Homo sapiens like-glycosyltransferase (LARGE), transcript variant 2, mRNAXM_868811PREDICTED: Bos taurus similar to collagen, type X, alpha 1 precursor (LOC616715), mRNA1e-30CB457677, DV785760, btcn44074, DV789543, DV787111, DV782647, DV787009, DV784351 Bt.14224.1.A1_at Bt.14224.1.A1_at Bt.14224.1.A1_at Bt.14224.1.A1_at Bt.14224.1.A1_at Bt.14224.1.A1_at Bt.14224.1.A1_at Bt.14224.1.A1_at
10712:45360_CL251Contig1-A:rNM_133642 (94196 bases away)Homo sapiens like-glycosyltransferase (LARGE), transcript variant 2, mRNAXM_588536PREDICTED: Bos taurus similar to C1q and tumor necrosis factor related protein 5 (predicted) (LOC511239), mRNA4e-33btcn44070, DV788836, DV790666, DV788108, DV787452 Bt.17998.1.A1_at Bt.17998.1.A1_at Bt.17998.1.A1_at Bt.17998.1.A1_at Bt.17998.1.A1_at
10713:45360_CL49Contig1-A:rNM_133642 (103932 bases away)Homo sapiens like-glycosyltransferase (LARGE), transcript variant 2, mRNAXM_588537PREDICTED: Bos taurus similar to Collagen alpha 1(X) chain precursor (LOC511240), mRNA4e-33DV786728, btcn44073, DV789665 Bt.14921.1.A1_at Bt.14921.1.A1_at Bt.14921.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10714:36779_15377582-A:fXM_602413PREDICTED: Bos taurus similar to synapsin III isoform IIIa (LOC524093), mRNA2e-19
10715:8096_CL2Contig1-B:fNM_174473Bos taurus tissue inhibitor of metalloproteinase 3 (Sorsby fundus dystrophy, pseudoinflammatory) (TIMP3), mRNA4e-33
10716:851_CL1Contig1-B:rNM_005488Homo sapiens target of myb1 (chicken) (TOM1), mRNANM_001035015Bos taurus target of myb1 (TOM1), mRNA4e-33BF044120, btcn7868 Bt.11007.1.S1_at (26894 bases away) Bt.11007.1.S1_at (4450 bases away)
10717:12366_CL1Contig1-B:rNM_001003681, NM_014250, NM_005487Homo sapiens high-mobility group protein 2-like 1 (HMG2L1), transcript variant 1, mRNAXM_881440PREDICTED: Bos taurus similar to high-mobility group protein 2-like 1 isoform b, transcript variant 4 (LOC505539), mRNA4e-33btcn7860 Bt.18676.1.A1_at, Bt.11007.2.S1_at, Bt.11007.1.S1_at
10718:10595_CL3Contig1-B:fNM_001786, NM_033379Homo sapiens cell division cycle 2, G1 to S and G2 to M (CDC2), transcript variant 1, mRNANM_174016Bos taurus cell division cycle 2, G1 to S and G2 to M (CDC2), mRNA4e-33AV591070.152, BC110151, btcn7866, btcn39841.197, btcn7864 Bt.26211.1.S1_at, Bt.2.1.S1_at, Bt.24202.1.S1_at Bt.2.1.S1_at Bt.2.1.S1_at Bt.26211.1.S1_at, Bt.2.1.S1_at, Bt.24202.1.S1_at Bt.2.1.S1_at
10719:8021_CL2Contig2-B:fNM_014836, NM_198225, NM_001032380Homo sapiens Rho-related BTB domain containing 1 (RHOBTB1), transcript variant 1, mRNAXM_868353PREDICTED: Bos taurus similar to Rho-related BTB domain-containing protein 1, transcript variant 2 (LOC540513), mRNA4e-33btcn7867 Bt.26483.1.A1_at
1071:18907_45457280-A:fNM_001015678Bos taurus KIAA0101 protein (KIAA0101), mRNA1e-30
10720:1127_CL1Contig2-B:fNM_203377, NM_203378, NM_005368Homo sapiens myoglobin (MB), transcript variant 1, mRNANM_173881Bos taurus myoglobin (MB), mRNA4e-33DV798516, DV798662, DV792701, DV798590, DV798738, DV796850, DV795582, DV792457, DV792080, DV793594, DV795738, DV795625, DV796422, DV791832, DV793880, DV792725, DV798578, DV781586, DV795860, DV794297, DV798952, DV798368, DV793093, DV793820, btcn10349, DV794677, DV791585, DV796830, DV793428, DV791760, DV798268, DV793220, DV797871, DV792135, DV796185 Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at Bt.11216.1.S1_at
10721:35938_16999032-A:fNM_014309 (30013 bases away)Homo sapiens RNA binding motif protein 9 (RBM9), transcript variant 2, mRNAXM_869107PREDICTED: Bos taurus similar to apolipoprotein L6 (LOC616957), mRNA4e-33btcn10361, btcn10360 Bt.6075.1.S1_at (24725 bases away) Bt.6075.1.S1_at (21990 bases away)
10722:10540_CL1Contig5-B:rNM_014309, NM_001031695Homo sapiens RNA binding motif protein 9 (RBM9), transcript variant 2, mRNAXM_881785PREDICTED: Bos taurus similar to RNA binding motif protein 9 isoform 1, transcript variant 12 (LOC514951), mRNA4e-33DN515834, DT888266, btcn10357, btcn10358 Bt.3013.1.S1_a_at, Bt.3013.2.S1_a_at Bt.3013.1.S1_a_at, Bt.3013.2.S1_a_at Bt.3013.2.S1_a_at Bt.3013.1.S1_a_at, Bt.3013.2.S1_a_at, Bt.2713.1.A1_at, Bt.5821.1.A1_at
10723:26253_CL1Contig1-B:fNM_002854Homo sapiens parvalbumin (PVALB), mRNAXM_581411PREDICTED: Bos taurus parvalbumin (LOC538603), mRNA4e-33btcn55281 Bt.9334.1.S1_at (25256 bases away)
10724:16352_CL1Contig2-B:fNM_013416, NM_000631Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 1, mRNAXM_584545PREDICTED: Bos taurus similar to neutrophil cytosolic factor 4 (40kD) isoform 1 (LOC507859), mRNA4e-33btcn55276, btcn55275 Bt.7625.1.S1_a_at Bt.7625.1.S1_a_at
10725:7229_9602283-A:fNM_000395Homo sapiens colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (CSF2RB), mRNAXM_606956PREDICTED: Bos taurus similar to Cytokine receptor common beta chain precursor (GM-CSF/IL-3/IL-5 receptor common beta-chain) (CD131 antigen) (CDw131 antigen) (LOC528530), mRNA4e-33BE482750 Bt.21069.1.S1_at (13187 bases away)
10728:14182_9751816-C:rNM_001014928Bos taurus ribosomal protein L7 (RPL7), mRNA1e-11
10729:1721_CL1Contig2-B:rNM_001013436 (6917 bases away)Homo sapiens mercaptopyruvate sulfurtransferase (MPST), transcript variant 3, mRNANM_177489Bos taurus thiosulfate sulfurtransferase (rhodanese) (TST), mRNA4e-33DV795062.1, DV783325.1, CV984552.1, btcn55273.1, btcn55270.1 Bt.460.1.S1_s_at Bt.460.1.S1_at, Bt.26649.1.A1_at, Bt.460.1.S1_s_at Bt.26649.1.A1_at, Bt.460.1.S1_s_at Bt.26649.1.A1_at, Bt.460.1.S1_s_at Bt.460.1.S1_at, Bt.26649.1.A1_at, Bt.460.1.S1_s_at
1072:45360_CL181Contig2-C:fXM_612832PREDICTED: Bos taurus similar to thyroid hormone receptor interactor 4 (LOC533430), mRNA2e-13AM039392.1, btcn12324.2, btcn44385.2, CV983964.2, btcn1878.2
10730:1721_CL2Contig1-A:rNM_001034291Bos taurus similar to 3-mercaptopyruvate sulfurtransferase (MGC129095), mRNA4e-33
10733:6559_CL1Contig2-A:rXM_589411PREDICTED: Bos taurus similar to Putative GTP-binding protein RAY-like (Rab-like protein 4) (LOC511981), mRNA4e-33
10734:5182_10178653-A:fNM_006078Homo sapiens calcium channel, voltage-dependent, gamma subunit 2 (CACNG2), mRNAXM_611048PREDICTED: Bos taurus calcium channel, voltage-dependent, gamma subunit 2 (CACNG2), mRNA1e-30AF273330 Bt.13102.1.A1_at, Bt.13102.1.S1_at
10735:14610_29203275-B:rNM_003753Homo sapiens eukaryotic translation initiation factor 3, subunit 7 zeta, 66/67kDa (EIF3S7), mRNANM_001034484Bos taurus eukaryotic translation initiation factor 3, subunit 7 zeta, 66/67kDa (EIF3S7), mRNA1e-30btcn43469, AV607675, CB532196 Bt.23244.1.S1_at Bt.23244.1.S1_at Bt.23244.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10736:15176_61761051-B:fNM_024955Homo sapiens FAD-dependent oxidoreductase domain containing 2 (FOXRED2), mRNAXM_612076PREDICTED: Bos taurus similar to Flavin-containing MonoOxygenase family member (fmo-1) (LOC532871), mRNA4e-33btcn43478 Bt.24860.1.A1_at
10737:2313_CL1Contig4-B:fNM_012473Homo sapiens thioredoxin 2 (TXN2), nuclear gene encoding mitochondrial protein, mRNANM_174208Bos taurus thioredoxin 2 (TXN2), mRNA4e-33btcn43471, btcn43470, btcn43472 Bt.5288.1.S1_at Bt.5288.1.S1_at Bt.5288.1.S1_at
10738:12477_CL19Contig1-B:rNM_002473Homo sapiens myosin, heavy polypeptide 9, non-muscle (MYH9), mRNAXM_882095PREDICTED: Bos taurus similar to myosin, heavy polypeptide 9, non-muscle, transcript variant 15 (LOC615771), mRNA4e-33btcn43466 Bt.26106.1.S1_at (27855 bases away)
10739:8241_17890082-A:fNM_031910 (2395 bases away)Homo sapiens C1q and tumor necrosis factor related protein 6 (C1QTNF6), transcript variant 1, mRNAXM_582858PREDICTED: Bos taurus similar to C1q and tumor necrosis factor related protein 6 (LOC506413), mRNA4e-33CN439250, btcn42632, btcn42633, BM254483, BI847665 Bt.25849.1.S1_at (3764 bases away) Bt.25849.1.S1_at Bt.25849.1.S1_at (3767 bases away) Bt.25849.1.S1_at Bt.25849.1.S1_at (304 bases away)
1073:3899_CL1Contig1-A:rNM_015042Homo sapiens zinc finger protein 609 (ZNF609), mRNAXM_865650PREDICTED: Bos taurus similar to zinc finger protein 609, transcript variant 3 (LOC510374), mRNA4e-33btcn1883 Bt.9496.1.S1_at
10740:2876_CL3Contig1-B:fNM_175792Bos taurus ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) (RAC2), mRNA4e-33
10741:6187_CL1Contig1-A:rNM_152733Homo sapiens BTB (POZ) domain containing 9 (BTBD9), mRNAXM_581795PREDICTED: Bos taurus similar to family with sequence similarity 60, member A (LOC538649), mRNA4e-33btcn2187.1, btcn18460.1, btcn8872.1, btcn2186 Bt.7760.1.S1_at (72619 bases away) Bt.7760.1.S1_at (72783 bases away) Bt.7760.1.S1_at (72187 bases away) Bt.7760.1.S1_at (21509 bases away)
10742:6925_CL3Contig1-B:rNM_144973Homo sapiens hypothetical protein MGC24039 (MGC24039), mRNABI682456, btcn18461 Bt.15602.1.S1_at (97404 bases away) Bt.15602.1.S1_at (100751 bases away)
10743:27498_29260356-A:rNM_173802Homo sapiens hypothetical protein MGC50559 (MGC50559), mRNAXM_608933PREDICTED: Bos taurus similar to C37A2.6 (LOC530461), mRNA4e-33btcn35286, DY131397, btcn35285, btcn35287 Bt.20687.2.A1_at (341867 bases away) Bt.20687.2.A1_at (334601 bases away) Bt.20687.2.A1_at (334808 bases away) Bt.20687.2.A1_at (333133 bases away)
10745:15971_CL2Contig2-A:fNM_005488 (75155 bases away)Homo sapiens target of myb1 (chicken) (TOM1), mRNAXM_592110PREDICTED: Bos taurus similar to Apolipoprotein-L3 (Apolipoprotein L-III) (ApoL-III) (TNF-inducible protein CG12-1) (CG12_1) (LOC514282), mRNA6e-20btcn12513.1 Bt.11007.1.S1_at (112829 bases away)
10746:45360_17893914-A:fXM_940854, NM_015353Homo sapiens potassium channel tetramerisation domain containing 2 (KCTD2), mRNAbtcn31258 Bt.6036.1.S1_at
10747:16395_CL1Contig1-A:fNM_006356, NM_001003785Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (ATP5H), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNANM_174724Bos taurus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (ATP5H), mRNA4e-33btcn31257, DV794760, DV792918, btcn31256, btcn31255 Bt.5029.1.S1_at Bt.5029.1.S1_at Bt.5029.1.S1_at Bt.5029.1.S1_at Bt.5029.1.S1_at
10748:6140_CL2Contig1-A:rNM_002133Homo sapiens heme oxygenase (decycling) 1 (HMOX1), mRNANM_001014912Bos taurus heme oxygenase (decyclizing) 1 (HMOX1), mRNA4e-33btcn6211 Bt.4001.1.S1_at
10749:9939_CL2Contig2-B:rNM_006739Homo sapiens MCM5 minichromosome maintenance deficient 5, cell division cycle 46 (S. cerevisiae) (MCM5), mRNAXM_583503PREDICTED: Bos taurus similar to DNA replication licensing factor MCM5 (CDC46 homolog) (P1-CDC46) (LOC506970), mRNA4e-33btcn6210 Bt.1130.1.S1_at
10750:40176_CL1Contig1-B:fNM_001040436Homo sapiens tyrosyl-tRNA synthetase 2 (mitochondrial) (YARS2), mRNAXM_882154PREDICTED: Bos taurus similar to Probable tyrosyl-tRNA synthetase, mitochondrial precursor (Tyrosine--tRNA ligase) (TyrRS), transcript variant 2 (LOC536956), mRNA4e-33btcn51850 Bt.9915.1.S1_at
10753:32575_CL33Contig1-B:fNM_139241Homo sapiens FYVE, RhoGEF and PH domain containing 4 (FGD4), mRNAXM_585326PREDICTED: Bos taurus similar to FYVE, RhoGEF and PH domain containing 4 (LOC508538), mRNA4e-33btcn51868 Bt.28780.2.A1_at (13471 bases away)
10754:4872_10028829-B:fNM_001714, NM_001003398Homo sapiens bicaudal D homolog 1 (Drosophila) (BICD1), transcript variant 1, mRNAXM_613316PREDICTED: Bos taurus similar to bicaudal D homolog 1 isoform 1 (LOC533796), mRNA4e-33btcn51864 Bt.27519.1.A1_at (332 bases away)
10755:24674_CL1Contig2-B:fXM_587818PREDICTED: Bos taurus similar to Temporarily Assigned Gene name family member (tag-58) (LOC510651), mRNA1e-30
10756:14002_CL2Contig1-A:rXM_869756PREDICTED: Bos taurus similar to CG9003-PA (LOC524465), mRNA1e-27
10757:9844_CL1Contig1-B:rXM_863885PREDICTED: Bos taurus similar to importin 8, transcript variant 2 (LOC523408), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10758:12031_10240164-A:fNM_198549Homo sapiens family with sequence similarity 73, member A (FAM73A), mRNAXM_863940PREDICTED: Bos taurus hypothetical protein LOC613309 (LOC613309), mRNA4e-33btcn43198 Bt.21036.1.S1_at (24823 bases away)
10759:3731_CL2Contig1-B:rNM_018099, XM_938544, XM_943715, NM_001013711, XM_943724, XM_943718, XM_943728Homo sapiens male sterility domain containing 1 (MLSTD1), mRNAXM_614132PREDICTED: Bos taurus similar to male sterility domain containing 1 (LOC534380), mRNA4e-33btcn43194 Bt.23449.1.S1_at (422 bases away)
1075:16034_CL1Contig1-B:rNM_152408Homo sapiens hypothetical protein FLJ35779 (FLJ35779), mRNAXM_612995PREDICTED: Bos taurus hypothetical LOC533555 (LOC533555), mRNA1e-30btcn2210 Bt.26947.1.S1_at
10760:32691_CL2Contig1-B:fNM_016570Homo sapiens ERGIC and golgi 2 (ERGIC2), mRNAXM_872008PREDICTED: Bos taurus similar to PTX1 protein, transcript variant 6 (LOC512481), mRNA4e-33btcn43185 Bt.25296.1.A1_at
10761:45360_CL792Contig1-A:rXM_584053PREDICTED: Bos taurus similar to Chymotrypsinogen B precursor (LOC507454), mRNA4e-33
10763:45360_10166971-A:fNM_183378Homo sapiens ovochymase 1 (OVCH1), mRNAXM_597187PREDICTED: Bos taurus similar to ovochymase 1 (LOC518980), mRNA3e-28BE752979 Bt.3732.1.A1_at (24750 bases away)
10764:8413_CL1Contig1-B:fNM_175861Homo sapiens transmembrane and tetratricopeptide repeat containing 1 (TMTC1), mRNAXM_612516PREDICTED: Bos taurus similar to ARG99 protein isoform 2 (LOC533191), mRNA4e-33btcn43192 Bt.3732.1.A1_at (4456 bases away)
10766:119_CL2Contig1-B:fXM_864145PREDICTED: Bos taurus similar to ethanolamine kinase 1, transcript variant 2 (LOC540705), mRNA4e-33
10767:14771_CL2Contig1-B:fNM_014802Homo sapiens KIAA0528 (KIAA0528), mRNAXM_598627PREDICTED: Bos taurus similar to CG6454-PB, isoform B (LOC520387), mRNA4e-33btcn18206 Bt.19208.1.A1_at, Bt.25089.2.A1_at, Bt.19208.2.S1_at
10769:9350_CL2Contig1-B:fNM_020782Homo sapiens kelch domain containing 5 (KLHDC5), mRNAbtcn30864, btcn30866 Bt.18997.1.A1_at, Bt.6561.1.S1_at Bt.6561.1.S1_at
1076:611_CL1Contig2-A:rNM_005713, NM_031361Homo sapiens collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (COL4A3BP), transcript variant 1, mRNANM_174765Bos taurus collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (COL4A3BP), mRNA1e-30btcn2205, btcn2208, btcn2206 Bt.7214.1.S1_a_at Bt.7214.1.S1_a_at Bt.7214.1.S1_a_at
10770:2810_CL3Contig1-B:rNM_174369Bos taurus inositol 1,4,5-triphosphate receptor, type 2 (ITPR2), mRNA4e-33btcn98.1
10771:4615_CL2Contig1-A:fNM_030762Homo sapiens basic helix-loop-helix domain containing, class B, 3 (BHLHB3), mRNAXM_865112PREDICTED: Bos taurus similar to basic helix-loop-helix domain containing, class B, 3 (LOC613907), mRNA3e-28btcn51424 Bt.12583.1.A1_at (1771 bases away)
10772:4615_CL3Contig1-A:rNM_030762Homo sapiens basic helix-loop-helix domain containing, class B, 3 (BHLHB3), mRNAXM_865112PREDICTED: Bos taurus similar to basic helix-loop-helix domain containing, class B, 3 (LOC613907), mRNA1e-30btcn51422 Bt.12583.1.A1_at
10773:1877_CL3Contig1-A:rNM_018115Homo sapiens SDA1 domain containing 1 (SDAD1), mRNAXM_865162PREDICTED: Bos taurus similar to SDA1 domain containing 1 (LOC613933), partial mRNA4e-33btcn51423.1, BE682045, btcn51423, btcn11578.1, btcn11578 Bt.19687.2.S1_at Bt.19687.2.S1_at Bt.19687.1.A1_at, Bt.19687.2.S1_at Bt.19687.2.S1_at Bt.19687.2.S1_at
10775:2810_CL9Contig1-A:fNM_174369Bos taurus inositol 1,4,5-triphosphate receptor, type 2 (ITPR2), mRNA4e-33
10776:32199_CL6Contig1-B:fNM_004985, NM_033360Homo sapiens v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (KRAS), transcript variant b, mRNAXM_614736PREDICTED: Bos taurus similar to c-K-ras2 protein isoform b (LOC541140), mRNA4e-33CF764545, btcn19263, btcn19259, btcn19257 Bt.2663.2.S1_at (242 bases away) Bt.2663.2.S1_at, Bt.28248.1.S1_at, Bt.2663.1.A1_at Bt.28248.1.S1_at Bt.2663.2.S1_at, Bt.28248.1.S1_at, Bt.2663.1.A1_at, Bt.9995.1.A1_at, Bt.16343.1.A1_at, Bt.8051.1.S1_at, Bt.9995.2.S1_at
10777:8881_CL1Contig1-B:f
10778:4289_47168118-A:rNM_018272Homo sapiens cancer susceptibility candidate 1 (CASC1), mRNAXM_604815PREDICTED: Bos taurus similar to cancer susceptibility candidate 1 (LOC526444), mRNA4e-30btcn19267 Bt.16226.1.A1_at
10779:26832_CL1Contig1-B:fNM_006152Homo sapiens lymphoid-restricted membrane protein (LRMP), mRNAXM_607592PREDICTED: Bos taurus similar to lymphoid-restricted membrane protein (LOC529152), mRNA2e-32btcn19265 Bt.27446.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1077:31022_CL1Contig1-B:fNM_000859Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A reductase (HMGCR), mRNAXM_605365PREDICTED: Bos taurus 3-hydroxy-3-methylglutaryl CoA reductase (hmg-coa-r), mRNA4e-33btcn2203, DY218773 Bt.11465.1.S1_at Bt.11465.1.S1_at (1537 bases away)
10780:44750_CL2Contig1-B:rNM_005504Homo sapiens branched chain aminotransferase 1, cytosolic (BCAT1), mRNAXM_582290PREDICTED: Bos taurus similar to branched chain aminotransferase 1, cytosolic, transcript variant 1 (LOC505926), mRNA4e-33btcn19253, BF039683 Bt.17278.3.S1_a_at, Bt.17278.1.A1_at, Bt.17278.2.S1_at, Bt.17278.3.S1_at Bt.17278.3.S1_a_at, Bt.17278.2.S1_at, Bt.17278.3.S1_at
10781:5616_CL1Contig1-B:rNM_003034Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (ST8SIA1), mRNANM_001035398Bos taurus similar to N-acylneuraminate cytidylyltransferase (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc synthetase) (MGC126990), mRNA4e-33DV785930.1, btcn20766.1, btcn16063 Bt.13269.1.S1_at (21524 bases away) Bt.13269.1.S1_at (21025 bases away) Bt.13269.1.S1_at
10782:6533_CL1Contig1-B:fNM_006710 (326615 bases away)Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) (COPS8), transcript variant 1, mRNANM_174192Bos taurus synaptotagmin 1 (SYT1), mRNA4e-33btcn24921 Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
10783:28708_CL1Contig1-B:rNM_002583Homo sapiens PRKC, apoptosis, WT1, regulator (PAWR), mRNAXM_611967PREDICTED: Bos taurus similar to PRKC, apoptosis, WT1, regulator (LOC532789), mRNA4e-33btcn24929 Bt.6409.1.S1_at
10784:2111_CL1Contig1-B:fNM_007178, XM_293026Homo sapiens serine/threonine kinase receptor associated protein (STRAP), mRNANM_001015567Bos taurus serine/threonine kinase receptor associated protein (STRAP), mRNA4e-33btcn55241, DV795352 Bt.17089.1.A1_at, Bt.5754.2.S1_at, Bt.5754.3.S1_at, Bt.5754.1.S1_at Bt.17089.1.A1_at, Bt.5754.2.S1_at, Bt.5754.3.S1_at
10785:306_CL1Contig1-B:fNM_032918Homo sapiens RAS-like, estrogen-regulated, growth inhibitor (RERG), mRNAXM_591003PREDICTED: Bos taurus similar to RAS-like, estrogen-regulated, growth inhibitor (LOC540025), mRNA4e-33btcn3534 Bt.24842.1.A1_at
10787:8405_CL2Contig1-B:fNM_000834Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate 2B (GRIN2B), mRNAXM_877232PREDICTED: Bos taurus similar to glutamate receptor, ionotropic, NMDA2B, transcript variant 3 (LOC537804), mRNA4e-33btcn51050 Bt.24527.1.S1_at (213035 bases away)
10788:2355_9600353-A:fNM_001423Homo sapiens epithelial membrane protein 1 (EMP1), mRNAXM_599688PREDICTED: Bos taurus similar to Epithelial membrane protein 1 (EMP-1) (Tumor-associated membrane protein) (LOC521424), mRNA1e-30DV793344.1, btcn51045.1
10789:3131_CL1Contig1-B:rXM_589568PREDICTED: Bos taurus similar to CG6184-PA, isoform A (LOC512120), partial mRNA4e-33
1078:44862_CL1Contig4-B:rNM_001018020, NM_001018006, NM_000366, NM_001018008, NM_001018004, NM_001018007, NM_001018005Homo sapiens tropomyosin 1 (alpha) (TPM1), transcript variant 5, mRNANM_001013590Bos taurus tropomyosin 1 (alpha) (TPM1), mRNA7e-32btcn28154, btcn28140, DN281341, DV798943, btcn28139, DV795771, AV611591, btcn28146, DV778963, btcn28142, DV792449, DV795053, DV798405, btcn28141, DV798644, DV792041, DV791644, DV795473 Bt.23026.1.A1_at, Bt.6442.1.S1_at, Bt.25001.1.A1_at Bt.25001.1.A1_at Bt.25001.1.A1_at (5900 bases away) Bt.25001.1.A1_at (4334 bases away) Bt.6442.1.S1_at, Bt.25001.1.A1_at Bt.25001.1.A1_at (4490 bases away) Bt.25001.1.A1_at (7696 bases away) Bt.25001.1.A1_at (4062 bases away) Bt.25001.1.A1_at (4413 bases away) Bt.25001.1.A1_at (7703 bases away) Bt.25001.1.A1_at (4480 bases away) Bt.25001.1.A1_at (4486 bases away) Bt.25001.1.A1_at (4464 bases away) Bt.25001.1.A1_at (7097 bases away) Bt.25001.1.A1_at (4337 bases away) Bt.25001.1.A1_at (4415 bases away) Bt.25001.1.A1_at (4428 bases away) Bt.25001.1.A1_at (4244 bases away)
10790:7436_163494-A:fNM_006205Homo sapiens phosphodiesterase 6H, cGMP-specific, cone, gamma (PDE6H), mRNANM_174422Bos taurus phosphodiesterase 6H, cGMP-specific, cone, gamma (PDE6H), mRNA4e-33btcn34773 Bt.445.1.S1_at
10791:3376_CL2Contig1-B:fNM_004963Homo sapiens guanylate cyclase 2C (heat stable enterotoxin receptor) (GUCY2C), mRNANM_174547Bos taurus guanylate cyclase 2C (GUCY2C), mRNA4e-33btcn10696 Bt.4538.1.S1_at
10792:2452_CL1Contig1-B:fNM_003034Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (ST8SIA1), mRNAXM_865920PREDICTED: Bos taurus sialyltransferase 8A, transcript variant 1 (SIAT8A), mRNA6e-29btcn16063 Bt.13269.1.S1_at
10793:3190_CL2Contig2-A:fNM_014903, XM_942350Homo sapiens neuron navigator 3 (NAV3), mRNAbtcn5587.1 Bt.25031.1.S1_at
10794:2148_CL4Contig1-B:fNM_015149Homo sapiens ral guanine nucleotide dissociation stimulator-like 1 (RGL1), mRNAXM_580286PREDICTED: Bos taurus similar to Ral guanine nucleotide dissociation stimulator-like 1 (RalGDS-like 1) (LOC504205), mRNA4e-33btcn5586, DT817841 Bt.16380.1.S1_at, Bt.16380.2.A1_at Bt.16380.1.S1_at (1227 bases away)
10795:45360_CL1422Contig1-B:fNM_015101Homo sapiens glycosyltransferase 25 domain containing 2 (GLT25D2), mRNAbtcn5589 Bt.19098.1.A1_s_at
10796:23930_CL1Contig5-B:rNM_001175Homo sapiens Rho GDP dissociation inhibitor (GDI) beta (ARHGDIB), mRNANM_175797Bos taurus Rho GDP dissociation inhibitor (GDI) beta (ARHGDIB), mRNA4e-33btcn16374, DY136582, DV801611, btcn16375, btcn16378, btcn16377, CB461663 Bt.4757.1.S1_at Bt.4757.1.S1_at Bt.4757.1.S1_at Bt.4757.1.S1_at Bt.4757.1.S1_at Bt.4757.1.S1_at (6383 bases away) Bt.4757.1.S1_at
10797:21177_CL1Contig1-B:fNM_152321Homo sapiens chromosome 12 open reading frame 46 (C12orf46), mRNANM_001038041Bos taurus similar to Protein Disulfide Isomerase family member (pdi-2) (MGC134360), mRNA4e-33AW669351, BI682830, btcn16385, BE757086, btcn16386 Bt.25738.1.A1_at Bt.25738.1.A1_at Bt.25738.1.A1_at Bt.25738.1.A1_at Bt.25738.1.A1_at
10798:1052_CL1Contig2-B:rNM_000900Homo sapiens matrix Gla protein (MGP), mRNANM_174707Bos taurus matrix Gla protein (MGP), mRNA4e-33btcn16372, CK848352, DV779333, btcn16369, DT817035, DT861198, DT893757, DV777208 Bt.3595.1.S1_at Bt.3595.1.S1_at Bt.3595.1.S1_at Bt.3595.1.S1_at Bt.3595.1.S1_at Bt.3595.1.S1_at Bt.3595.1.S1_at Bt.3595.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10799:17204_16745354-A:fNM_175874 (12661 bases away)Homo sapiens chromosome 12 open reading frame 60 (C12orf60), mRNAXM_583864PREDICTED: Bos taurus mono (ADP-ribosyl)transferase (ART4), mRNA4e-33btcn16388 Bt.28487.1.A1_at, Bt.28487.1.S1_at
1079:18286_CL1Contig1-B:rNM_171846 (11274 bases away)Homo sapiens lactamase, beta (LACTB), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNAXM_865595PREDICTED: Bos taurus similar to lactamase, beta isoform a (LOC614196), mRNA4e-33btcn25957, btcn28164 Bt.29600.1.A1_at, Bt.9076.1.S1_at Bt.29600.1.A1_at, Bt.9076.1.S1_at
107:30638_CL1Contig1-B:rNM_003907Homo sapiens eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa (EIF2B5), mRNAbtcn12539, DT888262 Bt.8835.1.S1_at Bt.8835.1.S1_at
10800:31211_9738672-A:fNM_175874, NM_001013698Homo sapiens chromosome 12 open reading frame 60 (C12orf60), mRNAXM_870816PREDICTED: Bos taurus hypothetical protein LOC618483 (LOC618483), mRNA4e-33AV608299 Bt.28487.1.A1_at (17569 bases away)
10801:12477_18451256-C:fNM_016312Homo sapiens WW domain binding protein 11 (WBP11), mRNAXM_590423PREDICTED: Bos taurus similar to WW domain binding protein 11 (LOC512838), mRNA4e-33btcn16380.1, btcn1841, DV817270.1, DV933706.1 Bt.14658.1.A1_at (11907 bases away) Bt.14658.1.A1_at (10142 bases away) Bt.14658.1.A1_at (12110 bases away) Bt.14658.1.A1_at (12109 bases away)
10802:12477_CL46Contig1-B:rXM_929769 (2571 bases away)PREDICTED: Homo sapiens similar to WW domain binding protein 11 (LOC646814), mRNAbtcn16381, btcn1841.1, btcn16380 Bt.18030.1.S1_at Bt.18030.1.S1_at Bt.18030.1.S1_at (5698 bases away)
10803:12477_CL9Contig1-A:fXM_929771, XM_926024, XM_937417, XM_937141PREDICTED: Homo sapiens similar to WW domain binding protein 11 (LOC347364), mRNAXM_614177PREDICTED: Bos taurus similar to WW domain binding protein 11 (predicted) (LOC534416), mRNA4e-33btcn16381, AJ813350, btcn1841.1, CB433669 Bt.18030.1.S1_at Bt.18030.1.S1_at Bt.18030.1.S1_at Bt.18030.1.S1_at
10804:45360_CL13Contig1-A:rNM_018267, NM_177925Homo sapiens H2A histone family, member J (H2AFJ), transcript variant 1, mRNAXM_870822PREDICTED: Bos taurus similar to H2A histone family, member J isoform 2 (LOC618489), mRNA4e-33btcn16368, CB448054 Bt.7471.1.S1_at Bt.7471.1.S1_at
10805:13066_CL1Contig1-B:fNM_002336 (41127 bases away)Homo sapiens low density lipoprotein receptor-related protein 6 (LRP6), mRNAXM_612558PREDICTED: Bos taurus similar to heme binding protein 1 (LOC533227), mRNA4e-33btcn35556.2, btcn47744.2, btcn27276.2, btcn35555.2, DV789253.2, btcn27275.2, btcn17027.1 Bt.19621.1.A1_at (35934 bases away) Bt.19621.1.A1_at (35812 bases away) Bt.19621.1.A1_at (36193 bases away) Bt.19621.1.A1_at (35818 bases away) Bt.19621.1.A1_at (35946 bases away) Bt.19621.1.A1_at (36206 bases away) Bt.19621.1.A1_at (35812 bases away)
10806:6238_37713565-A:fNM_018654Homo sapiens G protein-coupled receptor, family C, group 5, member D (GPRC5D), mRNAXM_614909PREDICTED: Bos taurus similar to G-protein coupled receptor family C group 5 member D (LOC534963), mRNA4e-33CF764346 Bt.18782.1.S1_at (29658 bases away)
10807:6238_CL1Contig1-A:rNM_003979Homo sapiens G protein-coupled receptor, family C, group 5, member A (GPRC5A), mRNANM_001034515Bos taurus G protein-coupled receptor, family C, group 5, member A (GPRC5A), mRNA4e-33btcn47745 Bt.18782.1.S1_at
10808:5414_CL2Contig1-B:rNM_016355, NM_201224Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 (DDX47), transcript variant 1, mRNAXM_877662PREDICTED: Bos taurus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1, transcript variant 4 (LOC534721), mRNA1e-30btcn47742 Bt.23258.1.S1_at
10809:15844_CL1Contig1-B:rNM_004064Homo sapiens cyclin-dependent kinase inhibitor 1B (p27, Kip1) (CDKN1B), mRNAXM_590159PREDICTED: Bos taurus similar to Cyclin-dependent kinase inhibitor 1B (Cyclin-dependent kinase inhibitor p27) (p27Kip1) (LOC512613), mRNA4e-33btcn47747, DN533887, btcn47746, btcn47748 Bt.10804.1.A1_at (4377 bases away) Bt.10804.1.A1_at (4367 bases away) Bt.10804.1.A1_at (2813 bases away) Bt.10804.1.A1_at (4233 bases away)
1080:1292_CL2Contig1-B:fNM_006358Homo sapiens solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 (SLC25A17), nuclear gene encoding mitochondrial protein, mRNANM_001040578Bos taurus ribosomal protein S27-like (RPS27L), mRNA4e-33CR849368, btcn28167.2, DV790627, btcn28166.2, btcn20845, CN440240.2, btcn50289.2 Bt.9739.1.S1_at (5177 bases away) Bt.10808.1.S1_at (15746 bases away) Bt.10808.1.S1_at Bt.10808.1.S1_at (15746 bases away) Bt.10808.1.S1_at Bt.10808.1.S1_at (15919 bases away) Bt.10808.1.S1_at (15746 bases away)
10810:16535_CL2Contig1-B:fNM_053052Homo sapiens chromosome 1 open reading frame 142 (C1orf142), mRNAXM_870876PREDICTED: Bos taurus hypothetical protein LOC618546 (LOC618546), partial mRNA4e-33btcn1070, btcn47741 Bt.24368.2.S1_a_at (3577 bases away) Bt.24368.2.S1_a_at (44658 bases away)
10812:17650_CL1Contig1-A:rNM_002259 (65448 bases away)Homo sapiens killer cell lectin-like receptor subfamily C, member 1 (KLRC1), transcript variant 1, mRNAXM_580770PREDICTED: Bos taurus similar to killer cell lectin-like receptor family I member 1 (LOC504622), mRNA1e-30btcn10191 Bt.17170.1.A1_at
10814:45360_CL1Contig40-A:fNM_007360 (4377 bases away)Homo sapiens killer cell lectin-like receptor subfamily K, member 1 (KLRK1), mRNAbtcn10179 Bt.17353.1.A1_at (31517 bases away)
10815:45360_9598677-A:fNM_197948 (5443 bases away)Homo sapiens C-type lectin domain family 7, member A (CLEC7A), transcript variant 3, mRNAXM_617095PREDICTED: Bos taurus similar to C-type lectin-like receptor-1, transcript variant 1 (LOC536944), mRNA4e-33btcn10184 Bt.3211.1.S1_at (143059 bases away)
10816:45360_29259954-A:fNM_016511 (1725 bases away)Homo sapiens C-type lectin domain family 1, member A (CLEC1A), mRNAbtcn10184 Bt.3211.1.S1_at (143059 bases away)
10817:45360_CL1027Contig1-B:rNM_002336Homo sapiens low density lipoprotein receptor-related protein 6 (LRP6), mRNAXM_607058PREDICTED: Bos taurus similar to low density lipoprotein receptor-related protein 6 (LOC528631), partial mRNA4e-33btcn4022 Bt.19621.1.A1_at (36069 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10818:24236_CL2Contig1-B:fNM_001015544Bos taurus Bcl2-like 14 (apoptosis facilitator) (BCL2L14), mRNA4e-33
10819:24236_CL1Contig1-A:fNM_001015544Bos taurus Bcl2-like 14 (apoptosis facilitator) (BCL2L14), mRNA4e-33
1081:14773_49411852-A:fXM_865663PREDICTED: Bos taurus similar to Ras-related protein Rab-8B (LOC614242), mRNA1e-30
10820:13877_CL1Contig1-B:rNM_138337 (1476 bases away)Homo sapiens C-type lectin domain family 12, member A (CLEC12A), transcript variant 1, mRNAXM_585566PREDICTED: Bos taurus similar to myeloid inhibitory C-type lectin-like receptor isoform alpha (LOC508740), mRNA4e-33btcn49555, AM021333, DT854328 Bt.24069.1.A1_at (157123 bases away) Bt.24069.1.A1_at (157691 bases away) Bt.24069.1.A1_at (157692 bases away)
10821:45360_47683495-A:fNR_002814 (33597 bases away)Homo sapiens CLR pseudogene (LOC374443) on chromosome 12XM_587046PREDICTED: Bos taurus similar to C-type lectin domain family 2, member h (LOC509972), mRNA4e-33DT824693, btcn28806, btcn49560 Bt.16118.1.S1_at, Bt.3052.1.S1_at, Bt.17720.1.A1_at Bt.16118.1.S1_at, Bt.3052.1.S1_at, Bt.17720.1.A1_at, Bt.24228.1.S1_at Bt.3052.1.S1_at, Bt.17720.1.A1_at
10823:45360_CL923Contig1-B:rNM_001781 (1650 bases away)Homo sapiens CD69 molecule (CD69), mRNANM_174014Bos taurus CD69 antigen (p60, early T-cell activation antigen) (CD69), mRNA4e-33btcn49567 Bt.8544.1.S1_at
10824:34510_CL1Contig1-B:fNM_001781 (24097 bases away)Homo sapiens CD69 molecule (CD69), mRNAXM_870923PREDICTED: Bos taurus similar to Killer cell lectin-like receptor subfamily F member 1 (Lectin-like receptor F1) (Activating coreceptor NKp80) (LOC618591), mRNA4e-33btcn49554 Bt.22491.2.S1_at, Bt.22491.1.A1_at
10825:12558_49427171-B:fXM_931785, XM_931768, XM_495917, XM_931806, XM_495907, XM_931765, XM_931813, XM_931772, XM_940823, XM_931795, XM_931790, XM_931817, XM_931776, XM_931801, XM_927026PREDICTED: Homo sapiens similar to cDNA sequence BC048546, transcript variant 1 (LOC440080), mRNAXM_584745PREDICTED: Bos taurus similar to pregnancy-zone protein (LOC508026), mRNA4e-33btcn49563 Bt.2560.1.S1_at (44034 bases away)
10826:12558_28152083-A:r
1082:1445_CL2Contig1-A:rNM_031301Homo sapiens anterior pharynx defective 1 homolog B (C. elegans) (APH1B), mRNAXM_609394PREDICTED: Bos taurus similar to anterior pharynx defective 1b homolog, transcript variant 1 (LOC530913), mRNA4e-33btcn28179 Bt.15400.1.A1_at (2413 bases away)
10830:40297_CL1Contig1-B:rNM_002355Homo sapiens mannose-6-phosphate receptor (cation dependent) (M6PR), mRNANM_175779Bos taurus mannose-6-phosphate receptor (cation dependent) (M6PR), mRNA4e-33btcn42913, DN512904, btcn42914 Bt.24057.1.A1_at, Bt.5032.1.S1_at Bt.5032.1.S1_at (923 bases away) Bt.24057.1.A1_at, Bt.5032.1.S1_at
10831:3677_CL2Contig1-B:rXM_941379, XM_934163, XM_934161, XM_929986, NM_004426, XM_934166, XM_945183, XM_945184Homo sapiens polyhomeotic-like 1 (Drosophila) (PHC1), mRNAXM_590962PREDICTED: Bos taurus similar to polyhomeotic 1-like (LOC540021), mRNA4e-33btcn42910 Bt.20423.1.S1_at
10832:12558_CL8Contig1-B:fNM_144670Homo sapiens alpha-2-macroglobulin-like 1 (A2ML1), mRNAXM_594928PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M) (LOC516769), mRNA2e-32btcn42918 Bt.25328.1.A1_at (47183 bases away)
10834:5523_CL1Contig1-B:rNM_020734Homo sapiens family with sequence similarity 80, member B (FAM80B), mRNAXM_581207PREDICTED: Bos taurus hypothetical LOC538579 (LOC538579), mRNA4e-33btcn42915 Bt.28956.1.A1_at
10835:10192_CL1Contig2-A:fNM_003480Homo sapiens microfibrillar associated protein 5 (MFAP5), mRNANM_174386Bos taurus microfibril-associated glycoprotein-2 (MAGP2), mRNA4e-33AV596863, DV775990, btcn42905, btcn42904 Bt.2560.1.S1_at Bt.2560.1.S1_at Bt.2560.1.S1_at Bt.2560.1.S1_at
1083:32_61759084-A:fNM_001218, NM_206925Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNADY048081, btcn28138 Bt.6261.1.S1_at (2153 bases away) Bt.6261.1.S1_at (1942 bases away)
10841:26231_49411015-A:rXM_595099PREDICTED: Bos taurus similar to scavenger receptor cysteine-rich type 1 protein M160 precursor (LOC516939), mRNA4e-33
10843:5510_CL1Contig2-B:rNM_000319Homo sapiens peroxisomal biogenesis factor 5 (PEX5), mRNAXM_592744PREDICTED: Bos taurus similar to peroxisomal biogenesis factor 5 (LOC514832), mRNA4e-33btcn24921, btcn47299, btcn47300 Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.10901.1.A1_at, Bt.10901.2.S1_at Bt.10901.1.A1_at, Bt.10901.2.S1_at
10844:1434_CL2Contig1-B:fNM_014718Homo sapiens calsyntenin 3 (CLSTN3), mRNAXM_587040PREDICTED: Bos taurus similar to Calsyntenin-3 precursor (LOC509969), mRNA4e-33btcn47291, btcn24921 Bt.10901.2.S1_at (41686 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
10845:2701_CL3Contig1-B:fNM_031491Homo sapiens retinol binding protein 5, cellular (RBP5), mRNAXM_587041PREDICTED: Bos taurus similar to retinol binding protein 5, cellular (LOC539418), mRNA4e-33btcn47275, btcn24921 Bt.8506.1.A1_at (30790 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10846:45360_9601151-A:fNM_001733 (10555 bases away)Homo sapiens complement component 1, r subcomponent (C1R), mRNAXM_584280PREDICTED: Bos taurus similar to complement component 1, r subcomponent-like precursor (LOC507633), mRNA2e-23BI538664, btcn24921, BE481618 Bt.8506.1.A1_at (474 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.8506.1.A1_at (8493 bases away)
1084:20127_CL2Contig1-B:rXM_877484PREDICTED: Bos taurus similar to ubiquitin specific protease 3, transcript variant 2 (LOC529395), mRNA5e-11
10850:45360_CL24Contig1-B:fXM_926979, NM_001733Homo sapiens complement component 1, r subcomponent (C1R), mRNANM_001034407Bos taurus complement component 1, r subcomponent (C1R), mRNA4e-18CR849836, btcn47249, BM365265, DV775911, DV789452, btcn24921, DV785244, DV782316, DV794061, btcn47250 Bt.8803.1.A1_at Bt.8803.1.A1_at Bt.8803.1.A1_at Bt.8803.1.A1_at Bt.8803.1.A1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.8803.1.A1_at Bt.8803.1.A1_at Bt.8803.1.A1_at Bt.8803.1.A1_at
10851:7178_CL1Contig1-B:fNM_080548, NM_002831Homo sapiens protein tyrosine phosphatase, non-receptor type 6 (PTPN6), transcript variant 1, mRNAXM_873792PREDICTED: Bos taurus src homology 2 domain-containing phosphatase-1, transcript variant 7 (LOC512312), mRNA4e-33AW478564, btcn24921, BM364771, btcn47279, CB423842, btcn47281 Bt.4149.1.S1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.4149.1.S1_at Bt.4149.1.S1_at Bt.4149.1.S1_at Bt.4149.1.S1_at
10852:3860_CL1Contig1-A:rNM_138425Homo sapiens chromosome 12 open reading frame 57 (C12orf57), mRNAXM_874165PREDICTED: Bos taurus similar to C10 protein, transcript variant 2 (LOC511545), mRNA4e-33btcn47246, btcn47245, btcn24921, btcn47247 Bt.2856.1.S1_at Bt.2856.1.S1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.2856.1.S1_at
10853:2944_CL1Contig3-A:rNM_032641Homo sapiens splA/ryanodine receptor domain and SOCS box containing 2 (SPSB2), mRNAXM_874493PREDICTED: Bos taurus similar to SPRY domain-containing SOCS box protein SSB-2, transcript variant 2 (LOC613651), mRNA4e-33btcn47307, btcn24921 Bt.6898.2.S1_at, Bt.6898.1.S1_at, Bt.6898.2.S1_a_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
10854:2299_CL1Contig1-B:rNM_002286Homo sapiens lymphocyte-activation gene 3 (LAG3), mRNAXM_593126PREDICTED: Bos taurus similar to lymphocyte-activation protein 3 precursor (LOC515155), mRNA4e-33btcn47332, btcn24921, btcn47331, AW446829 Bt.18959.1.A1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.18959.1.A1_at Bt.18959.1.A1_at
10855:6045_CL1Contig1-B:rXM_593457PREDICTED: Bos taurus similar to proacrosin binding protein sp32 precursor (LOC515434), mRNA4e-33
10856:5752_9724603-A:fNM_020400Homo sapiens G protein-coupled receptor 92 (GPR92), mRNANM_001034304Bos taurus G protein-coupled receptor 92 (GPR92), mRNA4e-33btcn24921, btcn47248 Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.24755.1.A1_at
10857:7175_CL1Contig5-B:rNM_001273Homo sapiens chromodomain helicase DNA binding protein 4 (CHD4), mRNAXM_582842PREDICTED: Bos taurus similar to chromodomain helicase DNA binding protein 4 (LOC506402), mRNA4e-33btcn47253, btcn24921, btcn47254, CV978447, btcn47258 Bt.21905.1.S1_at, Bt.12407.1.S1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.21905.1.S1_at, Bt.12407.1.S1_at Bt.12407.1.S1_at Bt.12407.1.S1_at
10858:17274_CL1Contig1-B:fXM_865141PREDICTED: Bos taurus similar to Proliferating-cell nucleolar antigen p120 (Proliferation-associated nucleolar protein p120) (LOC541169), mRNA4e-33
10859:26328_CL1Contig1-B:rNM_080730, NM_001039670, NM_080731Homo sapiens hypothetical protein LOC25900, isoform 3 (HOM-TES-103), transcript variant 2, mRNAXM_865571PREDICTED: Bos taurus similar to vimentin, transcript variant 2 (LOC506821), mRNA4e-33btcn47287, btcn24921 Bt.1040.1.A1_at (4927 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
1085:12575_CL1Contig1-B:fXM_591565PREDICTED: Bos taurus similar to F-box and leucine-rich repeat protein 22 (LOC513821), mRNA1e-30
10860:16607_CL1Contig2-B:fNM_080730 (3202 bases away)Homo sapiens hypothetical protein LOC25900, isoform 3 (HOM-TES-103), transcript variant 2, mRNANM_001034034Bos taurus glyceraldehyde-3-phosphate dehydrogenase (GAPD), mRNA4e-33DV794622, btcn47242, DV795684, btcn47244, DV791864, DV795298, DY053218, DV797403, DV798998, CB532596, btcn24921, DV793496, btcn47243, DV792254.1, DV795030, DV793886, DV793501, DV791977, DV798106, DY106629, DV794578, DV792162 Bt.2980.1.S1_at (4789 bases away) Bt.2980.1.S1_at (4818 bases away) Bt.2980.1.S1_at (2647 bases away) Bt.2980.1.S1_at (2601 bases away) Bt.2980.1.S1_at (4967 bases away) Bt.2980.1.S1_at (4814 bases away) Bt.2980.1.S1_at (2661 bases away) Bt.2980.1.S1_at (4851 bases away) Bt.2980.1.S1_at (2663 bases away) Bt.2980.1.S1_at (2960 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.2980.1.S1_at (2647 bases away) Bt.2980.1.S1_at (2643 bases away) Bt.2980.1.S1_at (4789 bases away) Bt.2980.1.S1_at (4789 bases away) Bt.2980.1.S1_at (2662 bases away) Bt.2980.1.S1_at (5024 bases away) Bt.2980.1.S1_at (2654 bases away) Bt.2980.1.S1_at (2664 bases away) Bt.2980.1.S1_at (2647 bases away) Bt.2980.1.S1_at (2661 bases away) Bt.2980.1.S1_at (2655 bases away)
10861:15655_CL1Contig1-B:rNM_080730 (9031 bases away)Homo sapiens hypothetical protein LOC25900, isoform 3 (HOM-TES-103), transcript variant 2, mRNAXM_586073PREDICTED: Bos taurus similar to Condensin subunit 1 (Chromosome condensation-related SMC-associated protein 1) (Chromosome-associated protein D2) (hCAP-D2) (XCAP-D2 homolog), transcript variant 1 (LOC509171), mRNA4e-33btcn47303.1, CR850349, btcn47302, btcn24921 Bt.2980.1.S1_at Bt.2980.1.S1_at Bt.2980.1.S1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
10862:335_CL1Contig1-A:rNM_014865 (2844 bases away)Homo sapiens chromosome condensation-related SMC-associated protein 1 (CNAP1), mRNAXM_591331PREDICTED: Bos taurus similar to mitochondrial ribosomal protein L51 (LOC513622), mRNA9e-16DV797075, btcn47271 Bt.2493.1.S1_at Bt.2493.1.S1_at
10863:10581_CL2Contig2-A:rNM_199245, NM_016830, NM_014231Homo sapiens vesicle-associated membrane protein 1 (synaptobrevin 1) (VAMP1), transcript variant 1, mRNAXM_591330PREDICTED: Bos taurus similar to vesicle-associated membrane protein 1 isoform 2 (LOC513621), mRNA4e-33btcn47261, btcn47260 Bt.7171.1.S1_at Bt.7171.1.S1_at
10864:18461_CL1Contig1-B:fNM_018009Homo sapiens TAP binding protein-like (TAPBPL), mRNAXM_876941PREDICTED: Bos taurus similar to TAP binding protein-like, transcript variant 2 (LOC529141), mRNA4e-33btcn47261, BE750252 Bt.7171.1.S1_at Bt.7171.1.S1_at (2028 bases away)
10865:23886_CL1Contig1-A:fXM_590049PREDICTED: Bos taurus similar to Tumor necrosis factor receptor superfamily member 7 precursor (CD27L receptor) (T-cell activation antigen CD27) (T14), transcript variant 1 (LOC512514), mRNA4e-33
10866:39370_CL1Contig1-B:rNM_002342Homo sapiens lymphotoxin beta receptor (TNFR superfamily, member 3) (LTBR), mRNAXM_580809PREDICTED: Bos taurus similar to lymphotoxin beta receptor (LOC504653), mRNA4e-33btcn47251 Bt.8646.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10867:5777_CL1Contig1-B:fNM_001038Homo sapiens sodium channel, nonvoltage-gated 1 alpha (SCNN1A), mRNANM_174598Bos taurus sodium channel, nonvoltage-gated 1 alpha (SCNN1A), mRNA4e-33btcn47325 Bt.4778.1.S1_at
10868:1447_CL1Contig1-B:rNM_001769Homo sapiens CD9 molecule (CD9), mRNANM_173900Bos taurus CD9 antigen (p24) (CD9), mRNA4e-33DV917498, btcn47240 Bt.2573.1.S1_at (242 bases away) Bt.2573.1.S1_at
10869:11001_CL5Contig1-B:fNM_025098Homo sapiens monoacylglycerol O-acyltransferase 2 (MOGAT2), mRNAXM_866027PREDICTED: Bos taurus similar to monoacylglycerol O-acyltransferase 2 (LOC614494), mRNA4e-33CF764013 (19319 bases away)
1086:29534_CL3Contig1-B:rNM_003922Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNAXM_618229PREDICTED: Bos taurus similar to guanine nucleotide exchange factor p532 (HERC1), mRNA4e-33btcn28172 Bt.5570.1.S1_at
10870:12558_CL1Contig1-B:fNM_002864Homo sapiens pregnancy-zone protein (PZP), mRNAXM_877327PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 5 (LOC513856), mRNA4e-33btcn16705, DV787492, btcn16704, btcn16707, DT901687 Bt.23514.1.S1_at Bt.23514.1.S1_at Bt.23514.1.S1_at Bt.23514.1.S1_at Bt.23514.1.S1_at
10873:560_CL1Contig1-B:fNM_014262Homo sapiens leprecan-like 2 (LEPREL2), mRNAbtcn55361, btcn24921 Bt.25474.1.S1_at (1481 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
10874:4309_CL1Contig7-A:fNM_002075Homo sapiens guanine nucleotide binding protein (G protein), beta polypeptide 3 (GNB3), mRNAbtcn55368, btcn55367, btcn24921 Bt.16171.1.S1_at, Bt.16171.2.A1_at Bt.16171.1.S1_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
10875:22028_CL1Contig1-B:rNM_031299Homo sapiens cell division cycle associated 3 (CDCA3), mRNANM_001035449Bos taurus cell division cycle associated 3 (CDCA3), mRNA4e-33btcn24921, btcn55359, btcn55360 Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.10696.1.S1_at Bt.10696.1.S1_at
10878:26231_CL19Contig1-B:fNM_020661 (517561 bases away)Homo sapiens activation-induced cytidine deaminase (AICDA), mRNAXM_592402PREDICTED: Bos taurus similar to CD163 antigen isoform a (LOC514534), partial mRNA4e-33btcn18142 Bt.24826.1.A1_at
10879:6045_13930886-A:fNM_032489Homo sapiens acrosin binding protein (ACRBP), mRNAXM_866117PREDICTED: Bos taurus similar to acrosin binding protein (LOC614569), partial mRNA4e-33btcn1802, btcn24921 Bt.4864.3.S1_a_at (3390 bases away) Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at
1087:29534_CL6Contig1-B:fNM_003922Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNAXM_618220PREDICTED: Bos taurus similar to guanine nucleotide exchange factor p532 (LOC538029), mRNA4e-33btcn28175, btcn28176 Bt.745.1.S1_at (54766 bases away) Bt.5570.1.S1_at (66674 bases away)
10880:2515_CL1Contig7-B:rNM_016162Homo sapiens inhibitor of growth family, member 4 (ING4), mRNANM_001035389Bos taurus inhibitor of growth family, member 4 (ING4), mRNA4e-33btcn1799, btcn1797, btcn1800, btcn1798, btcn24921, CB169640, CN793016, btcn1801 Bt.4864.3.S1_a_at Bt.4864.3.S1_a_at Bt.4864.3.S1_a_at Bt.4864.3.S1_a_at Bt.1040.2.S1_at, Bt.18959.1.A1_at, Bt.23205.1.S1_s_at, Bt.21905.1.S1_at, Bt.12514.1.S1_at, Bt.24755.1.A1_at, Bt.2856.1.S1_at, Bt.2980.1.S1_at, Bt.12407.1.S1_at, Bt.21757.1.A1_at, Bt.27979.1.A1_at, Bt.4860.1.S1_at, Bt.10901.1.A1_at, Bt.16146.1.A1_at, Bt.10696.1.S1_at, Bt.20090.1.S1_at, Bt.21757.2.S1_at, Bt.3487.1.S1_at, Bt.16171.1.S1_at, Bt.16322.2.S1_at, Bt.12370.1.S1_at, Bt.26573.2.S1_at, Bt.25985.1.A1_at, Bt.6898.2.S1_at, Bt.1491.1.S1_at, Bt.4864.3.S1_a_at, Bt.6898.1.S1_at, Bt.8803.1.A1_at, Bt.6898.2.S1_a_at, Bt.1040.1.A1_at, Bt.28153.1.S1_at, Bt.25474.1.S1_at, Bt.27979.1.S1_at, Bt.213.1.S1_at, Bt.8506.1.A1_at, Bt.22951.1.S1_at, Bt.16322.3.A1_at, Bt.27204.1.S1_at, Bt.16322.1.S1_at, Bt.10901.2.S1_at, Bt.7631.1.S1_at, Bt.26573.1.S1_at, Bt.16171.2.A1_at, Bt.1040.3.S1_at, Bt.4149.1.S1_at Bt.4864.3.S1_a_at Bt.4864.3.S1_a_at Bt.4864.3.S1_a_at
10881:33852_CL1Contig1-A:fXM_878085PREDICTED: Bos taurus similar to Zinc finger protein 384 (Nuclear matrix transcription factor 4) (CAG repeat protein 1), transcript variant 5 (LOC515007), mRNA4e-33
10882:12960_7425706-A:fXM_866162PREDICTED: Bos taurus hypothetical protein LOC614601 (LOC614601), mRNA4e-33
10883:136_CL1Contig2-B:rNM_000552Homo sapiens von Willebrand factor (VWF), mRNAXM_584169PREDICTED: Bos taurus similar to Von Willebrand factor precursor (vWF) (LOC614635), partial mRNA4e-33btcn40954, BM254398 Bt.12823.1.S1_at Bt.12823.1.S1_at
10884:4949_42731560-A:rNM_002527Homo sapiens neurotrophin 3 (NTF3), mRNAXM_610909PREDICTED: Bos taurus similar to Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2) (LOC532393), mRNA4e-33btcn44664 Bt.26112.1.A1_at (50453 bases away)
10885:582_CL1Contig1-B:fNM_004484Homo sapiens glypican 3 (GPC3), mRNANM_001035463Bos taurus similar to Glypican-3 precursor (Intestinal protein OCI-5) (GTR2-2) (MXR7) (MGC128119), mRNA4e-33btcn13721 Bt.11178.1.S1_at
10886:8613_CL3Contig1-A:rNM_003309Homo sapiens TSPY-like 1 (TSPYL1), mRNAXM_581001PREDICTED: Bos taurus similar to Testis-specific Y-encoded-like protein 1 (TSPY-like 1) (LOC538541), mRNA4e-33btcn53321 Bt.16052.1.S1_at
10887:5497_CL1Contig1-B:fXM_593226PREDICTED: Bos taurus similar to Protein C12orf4 (LOC515243), mRNA4e-33
10888:6162_CL1Contig2-A:fNM_001759Homo sapiens cyclin D2 (CCND2), mRNAXM_867216PREDICTED: Bos taurus similar to G1/S-specific cyclin D2 (LOC615414), mRNA4e-33btcn53316, btcn53318, btcn53317 Bt.4895.1.S1_at Bt.4895.1.S1_at Bt.4895.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10889:385_CL5Contig1-B:fNM_020367 (2217 bases away)Homo sapiens poly (ADP-ribose) polymerase family, member 11 (PARP11), mRNAXM_589237PREDICTED: Bos taurus similar to poly (ADP-ribose) polymerase family, member 11 (LOC539763), mRNA4e-33btcn53322, btcn53324 Bt.8984.1.S1_at Bt.8984.1.S1_at
1088:45360_29264878-A:rNM_017684, NM_020821Homo sapiens vacuolar protein sorting 13 homolog C (S. cerevisiae) (VPS13C), transcript variant 1A, mRNAbtcn50095, btcn50099 Bt.22341.1.A1_at Bt.22341.1.A1_at
10890:5015_CL2Contig1-B:fNM_032680Homo sapiens EF-hand calcium binding domain 4B (EFCAB4B), mRNAbtcn53333 Bt.8984.1.S1_at (55347 bases away)
10891:5015_11918229-A:fXM_937221PREDICTED: Homo sapiens similar to RAS and EF hand domain containing (LOC648176), mRNAbtcn53332 Bt.29273.1.A1_at (25855 bases away)
10892:2375_CL2Contig1-B:fNM_019854Homo sapiens protein arginine methyltransferase 8 (PRMT8), mRNAXM_867752PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein methyltransferase-like 4 (LOC615834), mRNA4e-33btcn33212, btcn53328 Bt.29273.1.A1_at (54392 bases away) Bt.29273.1.A1_at (14252 bases away)
10894:3689_28153144-A:rXM_940335, XM_291991PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, Q isoform 1 precursor (LOC387870), mRNAXM_600463PREDICTED: Bos taurus similar to protein tyrosine phosphatase, receptor type, Q isoform 2 precursor (LOC522188), mRNA4e-33CB167019 Bt.22973.1.S1_at (176013 bases away)
10899:19056_CL1Contig1-B:rXM_583891PREDICTED: Bos taurus hypothetical LOC538956 (LOC538956), mRNA4e-33
1089:45360_15633994-B:fNM_017684, NM_020821, NM_018080, NM_001018088Homo sapiens vacuolar protein sorting 13 homolog C (S. cerevisiae) (VPS13C), transcript variant 1A, mRNAbtcn50106 Bt.25604.1.A1_at (251 bases away)
108:6130_CL1Contig1-A:fNM_182589Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E (HTR3E), mRNAbtcn12538 Bt.24365.1.A1_at
10900:45895_CL2Contig1-B:fNM_006422Homo sapiens A kinase (PRKA) anchor protein 3 (AKAP3), mRNAXM_586330PREDICTED: Bos taurus A kinase (PRKA) anchor protein 3 (AKAP3), partial mRNA3e-28btcn38793 Bt.219.1.S1_at
10901:5497_CL2Contig1-B:rNM_020374Homo sapiens chromosome 12 open reading frame 4 (C12orf4), mRNAXM_587476PREDICTED: Bos taurus similar to Protein C12orf4 (LOC510348), mRNA4e-33btcn28833 Bt.29005.1.A1_at (17319 bases away)
10902:7705_CL1Contig2-B:rNM_005002Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa (NDUFA9), mRNANM_205817Bos taurus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa (NDUFA9), mRNA4e-33DV795054, btcn28825, DN527434, CK981240 Bt.5541.1.S1_at Bt.5541.1.S1_at Bt.5541.1.S1_at Bt.5541.1.S1_at
10903:37083_17997696-A:fNM_002235Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 6 (KCNA6), mRNAXM_588936PREDICTED: Bos taurus similar to Potassium voltage-gated channel subfamily A member 6 (Voltage-gated potassium channel subunit Kv1.6) (HBK2) (LOC539714), mRNA4e-33btcn28828 Bt.5541.1.S1_at (104089 bases away)
10904:37083_CL7Contig1-A:fNM_000217Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) (KCNA1), mRNAXM_582110PREDICTED: Bos taurus similar to Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (MKI) (MBK1) (LOC538703), mRNA2e-29btcn28836 Bt.5541.1.S1_at (202898 bases away)
10905:37083_CL6Contig1-A:fNM_002234Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 5 (KCNA5), mRNANM_001015552Bos taurus potassium voltage-gated channel shaker-related subfamily 5 (KCNA5), mRNA4e-33btcn28837 Bt.5541.1.S1_at (326263 bases away)
10906:9297_CL2Contig1-B:fXM_497334 (12182 bases away)PREDICTED: Homo sapiens tetraspanin 11 (TSPAN11), mRNAXM_868739PREDICTED: Bos taurus similar to tetraspanin 11 (LOC616660), mRNA1e-30btcn33211 Bt.24648.1.S1_at
10907:22_CL5Contig1-B:fNM_006675Homo sapiens tetraspanin 9 (TSPAN9), mRNAXM_591728PREDICTED: Bos taurus similar to Tetraspanin-9 (Tspan-9) (Tetraspan NET-5) (LOC540132), mRNA4e-33btcn33208 Bt.24478.1.S1_at
10908:30973_16998670-A:fXM_941174, NM_001034173, XM_927536PREDICTED: Homo sapiens aldehyde dehydrogenase 1 family, member L2 (ALDH1L2), mRNAXM_868887PREDICTED: Bos taurus similar to aldehyde dehydrogenase 1 family, member L2 (LOC616778), mRNA4e-33btcn33204 Bt.23714.1.A1_at (1953 bases away)
10909:20096_CL2Contig1-B:rNM_002014Homo sapiens FK506 binding protein 4, 59kDa (FKBP4), mRNANM_001034322Bos taurus similar to FK506-binding protein 4 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506 binding protein) (FKBP59) (MGC127596), mRNA4e-33btcn33199, btcn33198, DV797096, btcn34146.1 Bt.4797.1.S1_at (13 bases away) Bt.4797.1.S1_at Bt.4797.1.S1_at (12 bases away) Bt.4797.1.S1_at
10910:37016_CL2Contig1-B:rXM_940861, XM_931947, XM_927232, XM_931859, NM_030653, XM_931941, XM_931833, XM_931954, NM_004399, XM_931876, XM_944856, XM_931933, XM_944847, XM_931867, XM_931826, XM_931845, XM_931915, XM_495908, XM_931872, XM_931927, XM_931902, XM_931891, XM_944845, XM_931887, XM_931883, XM_931895, XM_931836Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 2, mRNAXM_582719PREDICTED: Bos taurus similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (LOC506293), mRNA4e-33DN846029 Bt.5577.1.S1_at (25209 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10911:37016_CL1Contig2-A:rXM_931947, XM_927232, XM_931859, NM_030653, XM_931941, XM_931954, NM_004399, XM_931876, XM_931933, XM_931907, XM_931845, XM_931915, XM_495908, XM_931927, XM_931902, XM_931891, XM_931918, XM_931887Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 2, mRNAXM_582719PREDICTED: Bos taurus similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (LOC506293), mRNA3e-28btcn33201, btcn33202, btcn33203 Bt.5577.1.S1_at (245 bases away) Bt.5577.1.S1_at (182 bases away) Bt.5577.1.S1_at
10912:9318_CL1Contig1-B:rXM_928159, XM_376814, XM_926939PREDICTED: Homo sapiens hypothetical protein MGC13005 (MGC13005), mRNAXM_613061PREDICTED: Bos taurus similar to CXYorf1-related protein (LOC533602), mRNA4e-33btcn33200 Bt.18222.1.S1_at
10913:31513_CL5Contig1-B:fNM_018979Homo sapiens WNK lysine deficient protein kinase 1 (WNK1), mRNAXM_582882PREDICTED: Bos taurus similar to WNK lysine deficient protein kinase 1 (LOC506433), partial mRNA4e-33AV592256, btcn52778 Bt.5013.3.S1_at (24069 bases away) Bt.5013.3.S1_at (302 bases away)
10914:31513_CL3Contig2-B:rNM_018979Homo sapiens WNK lysine deficient protein kinase 1 (WNK1), mRNAXM_582882PREDICTED: Bos taurus similar to WNK lysine deficient protein kinase 1 (LOC506433), partial mRNA4e-33DT885422, btcn52776, btcn52778, btcn52774 Bt.5013.3.S1_at (757 bases away) Bt.5013.2.A1_at, Bt.5013.3.S1_at Bt.5013.3.S1_at (302 bases away) Bt.5013.3.S1_at (739 bases away)
10915:27015_CL1Contig2-B:rNM_134424Homo sapiens RAD52 homolog (S. cerevisiae) (RAD52), mRNANM_001024525Bos taurus RAD52 homolog isoform alpha (RAD52), mRNA4e-33btcn52772, btcn52781 Bt.20457.2.S1_a_at, Bt.20948.1.S1_at Bt.20948.1.S1_at
10917:653_CL3Contig1-A:rNM_032642, NM_030775Homo sapiens wingless-type MMTV integration site family, member 5B (WNT5B), transcript variant 2, mRNAXM_584724PREDICTED: Bos taurus similar to wingless-type MMTV integration site family, member 5B precursor (LOC508008), mRNA4e-33btcn55044 Bt.17546.1.A1_at (2945 bases away)
10918:7104_CL1Contig1-A:fNM_152441Homo sapiens F-box and leucine-rich repeat protein 14 (FBXL14), mRNAXM_609698PREDICTED: Bos taurus similar to F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14) (LOC531211), mRNA4e-33btcn55032 Bt.12202.1.A1_at
10919:9123_CL1Contig1-A:rNM_178039, NM_178040, NM_178038, NM_015064, NM_178037Homo sapiens ELKS/RAB6-interacting/CAST family member 1 (ERC1), transcript variant alpha, mRNAXM_597487PREDICTED: Bos taurus similar to RAB6-interacting protein 2 isoform gamma (LOC519271), mRNA4e-33btcn55040 Bt.6776.1.S1_at (145537 bases away)
1091:7021_CL5Contig1-B:fNM_015059Homo sapiens talin 2 (TLN2), mRNAXM_606666PREDICTED: Bos taurus similar to talin 2 (LOC528252), mRNA4e-33btcn50092 Bt.24387.1.S1_at (166934 bases away)
10921:32467_CL1Contig1-B:rNM_152640Homo sapiens DCP1 decapping enzyme homolog B (S. cerevisiae) (DCP1B), mRNANM_001034467Bos taurus DCP1 decapping enzyme homolog B (S. cerevisiae) (DCP1B), mRNA4e-33btcn14651, DV893026 Bt.24459.2.S1_at, Bt.18688.1.A1_at, Bt.24459.1.A1_at Bt.24459.2.S1_at
10922:25995_CL6Contig1-A:rXM_941707, NM_000719Homo sapiens calcium channel, voltage-dependent, L type, alpha 1C subunit (CACNA1C), mRNAbtcn14668 Bt.12566.1.S1_at (88365 bases away)
10924:22266_CL1Contig1-A:fNM_014339Homo sapiens interleukin 17 receptor A (IL17RA), mRNAXM_603383PREDICTED: Bos taurus similar to interleukin 17 receptor precursor (LOC525040), mRNA4e-33btcn14655 Bt.12566.1.S1_at (11 bases away)
10926:2407_CL1Contig2-B:fNM_033070 (843 bases away)Homo sapiens cat eye syndrome chromosome region, candidate 5 (CECR5), transcript variant 2, mRNANM_001024538Bos taurus cat eye syndrome chromosome region, candidate 5 isoform 2 precursor (CECR5), mRNA4e-33btcn14649, btcn14646, BE722906, btcn14650 Bt.11598.2.S1_a_at Bt.11598.2.S1_a_at Bt.11598.2.S1_a_at Bt.11598.2.S1_a_at
10927:26035_CL1Contig1-B:fNM_177405, NM_017424Homo sapiens cat eye syndrome chromosome region, candidate 1 (CECR1), transcript variant 1, mRNAXM_870126PREDICTED: Bos taurus similar to cat eye syndrome critical region protein 1 isoform a precursor (LOC617805), partial mRNA4e-33btcn14665, CN788466 Bt.25822.1.S1_at Bt.25822.1.S1_at (1053 bases away)
10928:10340_CL1Contig1-B:fNM_001696, NM_001039366, NM_001039367Homo sapiens ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 (ATP6V1E1), transcript variant 1, mRNANM_174810Bos taurus ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E isoform 1 (ATP6V1E1), mRNA4e-33btcn46475, btcn46478, DV796328, btcn46476, btcn46477, btcn46474, DV934822 Bt.1753.1.S1_at Bt.1753.1.S1_at Bt.1753.1.S1_at Bt.1753.1.S1_at Bt.1753.1.S1_at Bt.1753.1.S1_at (2809 bases away) Bt.1753.1.S1_at (2834 bases away)
10929:45694_CL6Contig1-B:rXM_032996, XM_937571PREDICTED: Homo sapiens microtubule associated monoxygenase, calponin and LIM domain containing 3, transcript variant 1 (MICAL3), mRNAXM_610755PREDICTED: Bos taurus hypothetical LOC532244 (LOC532244), mRNA4e-33btcn7106 Bt.3830.2.S1_at (1110 bases away)
1092:7021_CL4Contig1-B:fNM_015059Homo sapiens talin 2 (TLN2), mRNAbtcn50110 Bt.24387.1.S1_at (72870 bases away)
10934:45694_12121771-A:fXM_931093, XM_943874, XM_931108, XM_931100, XM_938808, XM_943877, XM_943870, XM_926245PREDICTED: Homo sapiens similar to Protein MICAL-3, transcript variant 1 (LOC642566), mRNAXM_582016PREDICTED: Bos taurus similar to Protein MICAL-3 (LOC505689), mRNA4e-33BF773871 Bt.3830.2.S1_at (68389 bases away)
10935:20913_CL1Contig1-B:rNM_001894, NM_152221Homo sapiens casein kinase 1, epsilon (CSNK1E), transcript variant 2, mRNAbtcn11410 Bt.28499.1.S1_at, Bt.20084.2.S1_at, Bt.21673.1.S1_at, Bt.21018.1.S1_at, Bt.20084.1.S1_at, Bt.21018.2.A1_at
10936:39493_10867922-B:fNM_012264Homo sapiens chromosome 22 open reading frame 5 (C22orf5), mRNAXM_592033PREDICTED: Bos taurus similar to Putative MAP kinase-activating protein C22orf5 (Putative MAPK-activating protein FM08) (LOC514220), mRNA4e-33CB168520, DV871337, BF074411 Bt.10312.2.S1_at (9764 bases away) Bt.10312.2.S1_at (5856 bases away) Bt.10312.2.S1_at (4411 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10938:44710_CL1Contig1-B:rNM_001004426, NM_003560Homo sapiens phospholipase A2, group VI (cytosolic, calcium-independent) (PLA2G6), transcript variant 1, mRNAXM_615452PREDICTED: Bos taurus similar to phospholipase A2, group VI (LOC535381), mRNA4e-33btcn11442 Bt.20152.1.S1_at
10939:31238_CL1Contig1-B:rNM_025045Homo sapiens BAI1-associated protein 2-like 2 (BAIAP2L2), mRNANM_001035498Bos taurus BAI1-associated protein 2-like 2 (BAIAP2L2), mRNA7e-32btcn11408, BC102818 Bt.24822.1.S1_at Bt.24822.1.S1_at
10940:17740_CL2Contig1-B:fNM_001039584, NM_001039583, NM_012407Homo sapiens protein interacting with PRKCA 1 (PICK1), transcript variant 1, mRNAbtcn11433, btcn11431 Bt.15862.1.A1_at Bt.15862.1.A1_at
10941:1148_CL2Contig1-B:fNM_006941Homo sapiens SRY (sex determining region Y)-box 10 (SOX10), mRNAXM_879371PREDICTED: Bos taurus SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal), transcript variant 10 (SOX9), mRNA4e-33btcn11438 Bt.29179.1.S1_at (2855 bases away)
10942:17960_CL1Contig2-A:rNM_006941 (4230 bases away)Homo sapiens SRY (sex determining region Y)-box 10 (SOX10), mRNAXM_864900PREDICTED: Bos taurus similar to DNA directed RNA polymerase II polypeptide F (LOC613788), mRNA3e-28btcn9317, btcn11405 Bt.11138.1.S1_at Bt.11138.1.S1_at
10943:17740_61948409-A:rNM_033386Homo sapiens MICAL-like 1 (MICAL-L1), mRNAXM_879542PREDICTED: Bos taurus similar to Molecule interacting with Rab13 (MIRab13) (MICAL-like protein 1), transcript variant 3 (LOC517259), mRNA4e-33btcn11403 Bt.7990.1.S1_at, Bt.7990.2.S1_at
10944:20960_CL1Contig1-B:rNM_016091 (4326 bases away)Homo sapiens eukaryotic translation initiation factor 3, subunit 6 interacting protein (EIF3S6IP), mRNANM_001035296Bos taurus eukaryotic translation initiation factor 3, subunit 6 interacting protein (EIF3S6IP), mRNA4e-33AJ817420, btcn11386, btcn11388, btcn11385 Bt.1646.1.S1_at Bt.1646.1.S1_at Bt.1646.1.S1_at Bt.1646.1.S1_at
10945:19784_CL1Contig1-B:rNM_138797Homo sapiens ankyrin repeat domain 54 (ANKRD54), mRNAXM_583931PREDICTED: Bos taurus similar to CG10809-PA (LOC538961), mRNA4e-33btcn11437 Bt.14207.1.S1_at (14378 bases away)
10946:3031_CL1Contig3-B:rNM_014291Homo sapiens glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) (GCAT), nuclear gene encoding mitochondrial protein, mRNAXM_879944PREDICTED: Bos taurus 2-amino-3-ketobutyrate coenzyme A ligase, transcript variant 4 (GCAT), mRNA4e-33BI683499, btcn11394, CR848972, BI681097 Bt.14207.1.S1_at Bt.14207.1.S1_at Bt.14207.1.S1_at Bt.14207.1.S1_at
10947:3133_CL1Contig1-A:rNM_005318Homo sapiens H1 histone family, member 0 (H1F0), mRNAXM_583447PREDICTED: Bos taurus similar to Histone H1.0 (H1(0)) (Histone H1), transcript variant 1 (LOC617975), mRNA4e-33btcn11399, btcn11400 Bt.20929.1.S1_at, Bt.24209.1.S1_at Bt.20929.1.S1_at, Bt.24209.1.S1_at
10948:5316_CL1Contig1-B:rNM_001039141, NM_007032Homo sapiens TRIO and F-actin binding protein (TRIOBP), transcript variant 1, mRNAXM_589065PREDICTED: Bos taurus similar to Tara-like protein isoform 1 (LOC511680), mRNA4e-33btcn11396 Bt.22245.1.S1_at
10949:16338_CL1Contig2-B:rXM_880091PREDICTED: Bos taurus similar to expressed sequence C78541, transcript variant 6 (LOC615252), mRNA4e-33
10950:4810_CL1Contig3-A:rNM_002305Homo sapiens lectin, galactoside-binding, soluble, 1 (galectin 1) (LGALS1), mRNANM_175782Bos taurus lectin, galactoside-binding, soluble, 1 (galectin 1) (LGALS1), mRNA4e-33btcn11391, BM967872, btcn11390 Bt.5472.1.S1_at Bt.5472.1.S1_at Bt.5472.1.S1_at
10951:24778_CL1Contig1-A:fNM_020315Homo sapiens pyridoxal (pyridoxine, vitamin B6) phosphatase (PDXP), mRNANM_001035035Bos taurus pyridoxal (pyridoxine, vitamin B6) phosphatase (PDXP), mRNA4e-33btcn11392 Bt.21917.1.S1_at
10952:25723_47686921-A:f
10953:4122_CL3Contig1-B:rNM_013365, NM_001001560Homo sapiens golgi associated, gamma adaptin ear containing, ARF binding protein 1 (GGA1), transcript variant 1, mRNANM_001035408Bos taurus golgi associated, gamma adaptin ear containing, ARF binding protein 1 isoform 1 (GGA1), mRNA3e-28CB429460, btcn11395 Bt.1494.1.S1_at Bt.1494.1.S1_at
10954:4810_CL2Contig1-A:rXM_588368PREDICTED: Bos taurus similar to lectin, galactoside-binding, soluble, 2, transcript variant 1 (LOC511098), mRNA4e-33
10955:43376_CL1Contig1-B:rXM_588369PREDICTED: Bos taurus similar to CDC42 effector protein 1 isoform b (LOC511099), mRNA4e-33
10956:14668_11441881-A:fNM_018943Homo sapiens tubulin, alpha 8 (TUBA8), mRNAXM_870605PREDICTED: Bos taurus similar to Tubulin alpha-3 chain (Alpha-tubulin 3) (LOC618273), mRNA4e-18btcn11416, DV792833, btcn11417 Bt.4686.1.S1_at (22876 bases away) Bt.4686.1.S1_at (11056 bases away) Bt.4686.1.S1_at (10954 bases away)
10957:40164_11170495-B:fXM_618065PREDICTED: Bos taurus similar to Peroxisome assembly protein 26 (Peroxin-26) (LOC537878), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10958:17233_13935203-A:fNM_012331Homo sapiens methionine sulfoxide reductase A (MSRA), mRNANM_174114Bos taurus methionine sulfoxide reductase A (MSRA), mRNA3e-28btcn51291, btcn29909, btcn11426 Bt.4655.1.S1_at Bt.4655.1.S1_at Bt.4655.1.S1_at (389916 bases away)
10959:4305_CL3Contig1-A:rNM_174116Bos taurus myogenic factor 5 (MYF5), mRNA4e-33
1095:7021_CL3Contig1-B:rNM_015059Homo sapiens talin 2 (TLN2), mRNAXM_606666PREDICTED: Bos taurus similar to talin 2 (LOC528252), mRNA4e-33btcn50100 Bt.24387.1.S1_at
10960:4305_CL2Contig1-B:fNM_181811Bos taurus myogenic factor 6 (herculin) (MYF6), mRNA4e-33
10961:3689_CL1Contig1-B:fXM_940343, XM_926134PREDICTED: Homo sapiens protein tyrosine phosphatase, receptor type, Q (PTPRQ), mRNAXM_866702PREDICTED: Bos taurus similar to protein tyrosine phosphatase, receptor type, Q isoform 1 precursor (LOC615017), mRNA4e-33btcn30709 Bt.22973.1.S1_at (24392 bases away)
10963:45694_CL4Contig1-A:fXM_032996, XM_937571PREDICTED: Homo sapiens microtubule associated monoxygenase, calponin and LIM domain containing 3, transcript variant 1 (MICAL3), mRNAXM_870486PREDICTED: Bos taurus similar to EH domain binding protein 1 (LOC618162), partial mRNA4e-33btcn5309 Bt.3830.2.S1_at
10964:30404_CL1Contig3-B:rNM_015367 (6651 bases away)Homo sapiens BCL2-like 13 (apoptosis facilitator) (BCL2L13), nuclear gene encoding mitochondrial protein, mRNAXM_880287PREDICTED: Bos taurus similar to BH3 interacting domain death agonist (BID), transcript variant 3 (LOC510373), mRNA4e-33btcn5311, btcn5312 Bt.3222.1.A1_at Bt.3222.1.A1_at
10966:3874_CL1Contig1-A:fNM_015367Homo sapiens BCL2-like 13 (apoptosis facilitator) (BCL2L13), nuclear gene encoding mitochondrial protein, mRNAXM_870496PREDICTED: Bos taurus similar to Bcl-2-like 13 protein (Mil1 protein) (Bcl-rambo) (LOC618174), mRNA1e-30btcn11443, btcn5308, btcn5304, btcn46481, btcn5303 Bt.23810.1.A1_at, Bt.23810.2.S1_at Bt.1517.1.S1_at, Bt.23810.1.A1_at, Bt.23810.2.S1_at Bt.23810.1.A1_at, Bt.23810.2.S1_at Bt.23810.1.A1_at, Bt.23810.2.S1_at Bt.1517.1.S1_at (318 bases away)
10967:14966_CL1Contig3-B:fNM_174739Bos taurus cytosolic leucine-rich protein (LOC282859), mRNA4e-33
10968:15511_CL1Contig1-B:rNM_020243, XM_062912, XM_941053Homo sapiens translocase of outer mitochondrial membrane 22 homolog (yeast) (TOMM22), nuclear gene encoding mitochondrial protein, mRNAXM_587978PREDICTED: Bos taurus similar to Mitochondrial import receptor subunit TOM22 homolog (Translocase of outer membrane 22 kDa subunit homolog) (hTom22) (1C9-2), transcript variant 1 (LOC510780), mRNA4e-33DV783473, btcn31429, DV783360, DV795776 Bt.712.1.S2_at Bt.712.1.S2_at Bt.712.1.S2_at Bt.712.1.S2_at
10969:11324_CL2Contig1-B:rNM_014876Homo sapiens Josephin domain containing 1 (JOSD1), mRNANM_001014898Bos taurus Josephin domain containing 1 (JOSD1), mRNA4e-33btcn31432 Bt.22223.2.S1_at, Bt.22223.1.S1_at
10970:16246_6954828-A:fNM_004286Homo sapiens GTP binding protein 1 (GTPBP1), mRNANM_001017938Bos taurus GTP binding protein 1 (GTPBP1), mRNA4e-33AW426881, btcn6385 Bt.22223.2.S1_at (15305 bases away) Bt.1892.1.S1_at
10972:7936_CL6Contig2-B:rNM_016245Homo sapiens dehydrogenase/reductase (SDR family) member 8 (DHRS8), mRNAXM_605986PREDICTED: Bos taurus similar to Dehydrogenase/reductase SDR family member 8 precursor (17-beta-hydroxysteroid dehydrogenase 11) (17-beta-HSD 11) (17-beta-HSD XI) (17betaHSDXI) (17bHSD11) (17betaHSD11) (Retinal short-chain dehydrogenase/reductase 2) (retSDR2) (Cutaneous..., transcript variant 1 (LOC527592), mRNA4e-33DV782373, btcn13284, btcn13283, DV787646, btcn13285, DV786169, DV783000 Bt.11993.1.S1_at Bt.11993.1.S1_at (55 bases away) Bt.11993.1.S1_at Bt.11993.1.S1_at Bt.11993.1.S1_at Bt.11993.1.S1_at Bt.11993.1.S1_at
10973:42149_CL5Contig1-B:rNM_006386, NM_030881Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (DDX17), transcript variant 1, mRNAXM_880730PREDICTED: Bos taurus similar to DEAD box polypeptide 17 isoform 2, transcript variant 9 (LOC514323), mRNA4e-33btcn38098, DV798231, btcn38100, btcn38099, DT897383, DV792429 Bt.18993.1.A1_at, Bt.21440.1.S1_at Bt.21440.1.S1_at (1466 bases away) Bt.18993.1.A1_at Bt.18993.1.A1_at (408 bases away) Bt.18993.1.A1_at Bt.18993.1.A1_at
10974:12157_CL1Contig1-B:rNM_016657, NM_006855Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 (KDELR3), transcript variant 1, mRNAXM_586702PREDICTED: Bos taurus similar to ER lumen protein retaining receptor 3 (KDEL receptor 3) (KDEL endoplasmic reticulum protein retention receptor 3) (LOC509687), mRNA4e-33btcn38102 Bt.1199.1.S1_at
10975:21299_CL1Contig1-B:rNM_138435Homo sapiens family with sequence similarity 83, member F (FAM83F), mRNAXM_580566PREDICTED: Bos taurus hypothetical LOC538476 (LOC538476), mRNA4e-33btcn13010 Bt.6299.1.S1_at
10976:14930_CL1Contig1-B:fNM_004810Homo sapiens GRB2-related adaptor protein 2 (GRAP2), mRNAXM_600626PREDICTED: Bos taurus similar to GRB2-related adaptor protein 2 (LOC522346), mRNA4e-33CK774326, btcn13006, btcn13008 Bt.25883.1.A1_at Bt.25883.1.A1_at Bt.25883.1.A1_at
10977:473_CL1Contig1-B:rNM_000262Homo sapiens N-acetylgalactosaminidase, alpha- (NAGA), mRNAXM_867741PREDICTED: Bos taurus similar to Alpha-N-acetylgalactosaminidase precursor (Alpha-galactosidase B), transcript variant 2 (LOC533357), mRNA4e-33btcn39045, DT818618 Bt.3999.1.S1_at, Bt.8990.1.S1_at Bt.3999.1.S1_at
10978:8093_62803457-A:fNM_001002034Homo sapiens family with sequence similarity 109, member B (FAM109B), mRNAXM_867763PREDICTED: Bos taurus similar to CG12393-PA, isoform A, transcript variant 3 (LOC506148), mRNA4e-33btcn39050 Bt.5202.1.S1_at
10979:88_CL1Contig1-A:fNM_002490 (2496 bases away)Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa (NDUFA6), nuclear gene encoding mitochondrial protein, mRNAXM_880842PREDICTED: Bos taurus similar to CG17680-PA, transcript variant 3 (LOC506149), mRNA4e-33btcn39036, BP108744, btcn39038, btcn39035, DV842631, btcn39040, btcn39041 Bt.63.1.S1_at, Bt.15724.1.S1_at Bt.15724.1.S1_at Bt.15724.1.S1_at Bt.15724.1.S1_at Bt.15724.1.S1_at Bt.15724.1.S1_at Bt.15724.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1097:5938_CL2Contig2-B:rNM_000236Homo sapiens lipase, hepatic (LIPC), mRNANM_001035410Bos taurus lipase, hepatic (LIPC), mRNA4e-33btcn19584, btcn19581, btcn19585, BC103072, DV783115, DT893754 Bt.19614.1.A1_at Bt.26992.1.A1_at, Bt.4781.1.S1_at, Bt.19614.1.A1_at, Bt.26992.2.S1_at Bt.19614.1.A1_at Bt.19614.1.A1_at Bt.26992.1.A1_at, Bt.4781.1.S1_at, Bt.19614.1.A1_at, Bt.26992.2.S1_at Bt.19614.1.A1_at
10980:6577_CL1Contig1-B:rNM_002490Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa (NDUFA6), nuclear gene encoding mitochondrial protein, mRNANM_175791Bos taurus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa (NDUFA6), mRNA4e-33btcn39036, btcn39037, CF768316 Bt.63.1.S1_at, Bt.15724.1.S1_at Bt.63.1.S1_at Bt.63.1.S1_at
10981:40618_CL1Contig2-A:fNR_002570, NM_000106, NM_001025161Homo sapiens cytochrome P450, family 2, subfamily D, polypeptide 6 (CYP2D6), transcript variant 1, mRNANM_174529Bos taurus cytochrome P450, family 2, subfamily D, polypeptide 6 (CYP2D6), mRNA9e-16BI849982, btcn39061, BF603402, btcn39065.1, DT845634 Bt.665.1.S1_at (1190 bases away) Bt.665.1.S1_at, Bt.665.1.S1_s_at Bt.665.1.S1_at (1130 bases away) Bt.665.1.S1_at, Bt.665.1.S1_s_at Bt.665.1.S1_at (939 bases away)
10982:40618_CL1Contig6-B:fNM_000106 (187 bases away)Homo sapiens cytochrome P450, family 2, subfamily D, polypeptide 6 (CYP2D6), transcript variant 1, mRNAbtcn39061, BF603402, DT845634 Bt.665.1.S1_at, Bt.665.1.S1_s_at Bt.665.1.S1_at (1130 bases away) Bt.665.1.S1_at (939 bases away)
10983:4579_CL1Contig1-A:rNM_005650, NM_181492Homo sapiens transcription factor 20 (AR1) (TCF20), transcript variant 1, mRNAXM_601446PREDICTED: Bos taurus similar to transcription factor 20 isoform 1 (LOC523151), mRNA4e-33btcn39072 Bt.20091.1.S1_at (43490 bases away)
10984:20592_CL1Contig1-B:rNM_170694 (89561 bases away)Homo sapiens serine hydrolase-like (SERHL), mRNAXM_589601PREDICTED: Bos taurus similar to NFAT activation molecule 1 precursor (LOC512151), mRNA4e-33btcn39070, btcn39071 Bt.9351.1.S1_at (14525 bases away) Bt.9351.1.S1_at
10985:17249_CL1Contig1-A:fNM_017436Homo sapiens alpha 1,4-galactosyltransferase (globotriaosylceramide synthase) (A4GALT), mRNAXM_870701PREDICTED: Bos taurus similar to Lactosylceramide 4-alpha-galactosyltransferase (Alpha-1,4-galactosyltransferase) (UDP-galactose:beta-D-galactosyl-beta1-R 4-alpha-D-galactosyltransferase) (Alpha-1,4-N-acetylglucosaminyltransferase) (Alpha4Gal-T1) (Globotriaosylceramide ... (LOC618369), mRNA1e-30btcn39058 Bt.4873.1.S1_at (70722 bases away)
10986:14753_CL1Contig1-B:rNM_014570Homo sapiens ADP-ribosylation factor GTPase activating protein 3 (ARFGAP3), mRNAXM_611951PREDICTED: Bos taurus similar to ADP-ribosylation factor GTPase activating protein 3 (LOC532778), partial mRNA4e-33btcn39047, btcn39048, DV791465 Bt.6257.1.S1_at, Bt.7439.1.S1_at Bt.7439.1.S1_at Bt.7439.1.S1_at
10988:4667_61014343-A:fNM_014293Homo sapiens neuronal pentraxin receptor (NPTXR), mRNAXM_615650PREDICTED: Bos taurus chromobox-like protein 6, transcript variant 1 (LOC513830), mRNA4e-33DN549251 Bt.13458.2.S1_at (2514 bases away)
10989:18545_CL1Contig1-B:rNM_015374Homo sapiens unc-84 homolog B (C. elegans) (UNC84B), mRNAXM_870724PREDICTED: Bos taurus similar to Sad1/unc-84-like protein 2 (Rab5-interacting protein) (Rab5IP) (LOC618392), mRNA4e-33btcn6384, btcn6383 Bt.20531.1.A1_at, Bt.26542.1.S1_at, Bt.26542.2.A1_at Bt.26542.1.S1_at, Bt.26542.2.A1_at
1098:22130_CL2Contig1-A:rNM_001110Homo sapiens ADAM metallopeptidase domain 10 (ADAM10), mRNANM_174496Bos taurus a disintegrin and metalloproteinase domain 10 (ADAM10), mRNA4e-33btcn5764, btcn19581, btcn19583, DV783115 Bt.4781.1.S1_at, Bt.8263.1.A1_at Bt.26992.1.A1_at, Bt.4781.1.S1_at, Bt.19614.1.A1_at, Bt.26992.2.S1_at Bt.26992.1.A1_at, Bt.4781.1.S1_at, Bt.26992.2.S1_at Bt.26992.1.A1_at, Bt.4781.1.S1_at, Bt.19614.1.A1_at, Bt.26992.2.S1_at
10990:16246_CL1Contig1-B:fNM_004286Homo sapiens GTP binding protein 1 (GTPBP1), mRNAbtcn6386, btcn6385 Bt.1892.1.S1_at Bt.1892.1.S1_at
10991:44182_CL1Contig1-B:rXM_929809 (2107 bases away)PREDICTED: Homo sapiens hypothetical protein LOC646851 (LOC646851), mRNAXM_585422PREDICTED: Bos taurus hypothetical LOC508622 (LOC508622), mRNA4e-33btcn6403 Bt.11268.1.S1_at (52505 bases away)
10994:16993_CL1Contig1-B:fNM_175709 (16159 bases away)Homo sapiens chromobox homolog 7 (CBX7), mRNAXM_881313PREDICTED: Bos taurus similar to ARP10 protein, transcript variant 2 (LOC504505), mRNA4e-33btcn6377, btcn6380, btcn6378 Bt.9267.1.A1_at Bt.9267.1.A1_at Bt.9267.1.A1_at
10995:8521_CL2Contig1-B:rNR_002183, NM_003932, NR_002198, NM_002608Homo sapiens family with sequence similarity 10, member A4 (FAM10A4) on chromosome 13NM_001017953Bos taurus platelet-derived growth factor B (PDGFB), mRNA4e-33btcn6394, btcn20848, DV799007, btcn34648.1 Bt.14175.1.A1_at (67680 bases away) Bt.21053.1.A1_at, Bt.15684.1.S1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.9739.1.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at Bt.21053.1.A1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at Bt.21053.1.A1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at
10996:7936_CL1Contig5-B:rNM_001033853, NM_000967, NM_007361Homo sapiens ribosomal protein L3 (RPL3), transcript variant 1, mRNAXM_600125PREDICTED: Bos taurus similar to Nidogen-2 precursor (NID-2) (Osteonidogen) (LOC521854), mRNA4e-33btcn6369.1, btcn174.1, CO882521.1, btcn6368.1, DY185087, CB466631.1, btcn6365.1 Bt.16087.1.S1_at (71879 bases away) Bt.16087.1.S1_at (71663 bases away) Bt.16087.1.S1_at (72520 bases away) Bt.16087.1.S1_at (71944 bases away) Bt.16087.1.S1_at (67403 bases away) Bt.16087.1.S1_at (72312 bases away) Bt.16087.1.S1_at (71691 bases away)
10997:20800_CL2Contig2-B:rNR_002183, NM_003932, NR_002198, NM_145738, NM_145731, NM_004711Homo sapiens family with sequence similarity 10, member A4 (FAM10A4) on chromosome 13NM_001034623Bos taurus similar to synaptogyrin 1 isoform 1b (MGC128630), mRNA4e-33btcn6371, btcn6372, DT854312, btcn20848, AW336442, DV799007, btcn34648.1, DV876914 Bt.21053.1.A1_at, Bt.21053.2.S1_at Bt.21053.1.A1_at, Bt.21053.2.S1_at Bt.21053.1.A1_at, Bt.21053.2.S1_at Bt.21053.1.A1_at, Bt.15684.1.S1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.9739.1.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at Bt.21053.2.S1_at Bt.21053.1.A1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at Bt.21053.1.A1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at Bt.21053.1.A1_at, Bt.21053.2.S1_at
10999:7719_7424107-B:fNM_006116Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (MAP3K7IP1), transcript variant alpha, mRNAXM_598189PREDICTED: Bos taurus similar to Mitogen-activated protein kinase kinase kinase 7 interacting protein 1 (TAK1-binding protein 1) (LOC519958), mRNA2e-23btcn6398 Bt.26756.1.S1_at (739 bases away)
1099:30973_CL1Contig2-B:fNM_003888, NM_170696, NM_170697Homo sapiens aldehyde dehydrogenase 1 family, member A2 (ALDH1A2), transcript variant 1, mRNAXM_615062PREDICTED: Bos taurus similar to aldehyde dehydrogenase 1A2 isoform 1 (LOC535075), mRNA4e-33CB432384, btcn19590 Bt.19093.1.S1_at (8280 bases away) Bt.19093.1.S1_at
109:13413_CL7Contig1-A:rNM_173216, NM_003032Homo sapiens ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 (ST6GAL1), transcript variant 2, mRNANM_177517Bos taurus sialyltransferase 1 (beta-galactoside alpha-2,6-sialytransferase) (SIAT1), mRNA1e-30BC112480, btcn30189 Bt.299.1.S1_at (25213 bases away) Bt.29789.1.S1_at, Bt.299.1.S1_at, Bt.29787.1.S1_s_at, Bt.29789.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
10:18927_CL1Contig1-B:fNM_000629Homo sapiens interferon (alpha, beta and omega) receptor 1 (IFNAR1), mRNANM_174552Bos taurus interferon, alpha; receptor (IFNAR1), mRNA4e-33btcn48991, DV895846 Bt.22665.1.S1_at, Bt.24741.1.S1_at, Bt.4557.1.S1_at Bt.22665.1.S1_at, Bt.24741.1.S1_at, Bt.4557.1.S1_at
11000:6103_CL1Contig1-B:rNM_001018052, NM_138338, NM_001018051, NM_001098, NM_001018050Homo sapiens aconitase 2, mitochondrial (ACO2), nuclear gene encoding mitochondrial protein, mRNANM_173977Bos taurus aconitase 2, mitochondrial (ACO2), mRNA4e-33DV793617, btcn3221, CK835707, DY182124 Bt.5210.1.S1_at Bt.5210.1.S1_at Bt.5210.1.S1_at Bt.5210.1.S1_at
11001:8901_CL1Contig1-B:r
11002:19781_CL1Contig1-B:rNM_020831 (154 bases away)Homo sapiens megakaryoblastic leukemia (translocation) 1 (MKL1), mRNAXM_585886PREDICTED: Bos taurus similar to MKL/myocardin-like protein 1 (Myocardin-related transcription factor A) (MRTF-A) (Megakaryoblastic leukemia 1 protein homolog) (Basic SAP coiled-coil transcription activator) (LOC509011), partial mRNA4e-33btcn50487, BM105685, btcn50488 Bt.1662.1.A1_at, Bt.28121.1.S1_at Bt.1662.1.A1_at, Bt.28121.1.S1_at Bt.1662.1.A1_at, Bt.28121.1.S1_at
11003:45360_CL1061Contig1-B:fNM_015705Homo sapiens RUN and TBC1 domain containing 3 (RUTBC3), mRNAbtcn50493 Bt.750.1.S1_at
11004:17680_CL1Contig3-B:fXM_881605PREDICTED: Bos taurus similar to adenylosuccinate lyase, transcript variant 5 (LOC510949), mRNA4e-33
11005:42483_CL1Contig1-B:fNM_015088, NM_001024843Homo sapiens trinucleotide repeat containing 6B (TNRC6B), transcript variant 1, mRNAXM_606579PREDICTED: Bos taurus similar to Trinucleotide repeat-containing 6B protein (LOC528167), mRNA4e-33CB433911, btcn50496 Bt.12957.1.A1_at, Bt.12957.1.A1_a_at Bt.12957.1.A1_at, Bt.12957.1.A1_a_at
11006:4693_CL2Contig1-B:rNM_004599Homo sapiens sterol regulatory element binding transcription factor 2 (SREBF2), mRNAXM_583656PREDICTED: Bos taurus similar to sterol regulatory element-binding transcription factor 2 (LOC507102), mRNA4e-33btcn26986 Bt.11226.2.S1_at
11007:7439_56135209-A:rNM_052945Homo sapiens tumor necrosis factor receptor superfamily, member 13C (TNFRSF13C), mRNAXM_870848PREDICTED: Bos taurus similar to BAFF receptor (LOC618516), mRNA4e-33CV974488 Bt.11226.1.S1_at (14889 bases away)
11009:24263_45459166-B:fNM_024053, NM_001002876Homo sapiens centromere protein M (CENPM), transcript variant 1, mRNANM_001038686Bos taurus similar to proliferation associated nuclear element 1 isoform a (MGC134606), mRNA1e-30btcn26990, btcn26987 Bt.27805.1.S1_at, Bt.27805.2.S1_a_at Bt.27805.2.S1_a_at
1100:10689_CL1Contig1-B:rXM_943391, XM_931508, NM_001018102, XM_943390, NM_001018090, XM_926690, XM_943392, XM_937649, XM_931501, NM_001018091, NM_015532, XM_291095Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A (GRINL1A), transcript variant 1, mRNAXM_582363PREDICTED: Bos taurus similar to GRINL1A combined protein isoform 1 (LOC538737), mRNA4e-33btcn19575 Bt.25922.1.A1_at
11010:22903_CL1Contig1-B:rXM_934917 (401 bases away)PREDICTED: Homo sapiens hypothetical protein LOC339674, transcript variant 2 (LOC339674), mRNAXM_618723PREDICTED: Bos taurus hypothetical LOC535121 (LOC535121), mRNA3e-12btcn26992 Bt.27805.2.S1_a_at (12951 bases away)
11011:10369_CL1Contig1-A:rNM_005297Homo sapiens melanin-concentrating hormone receptor 1 (MCHR1), mRNAXM_591601PREDICTED: Bos taurus similar to G protein-coupled receptor 24 (LOC540119), mRNA7e-32btcn20872 Bt.10808.1.S1_at (50759 bases away)
11012:17461_CL1Contig1-B:rNM_006358Homo sapiens solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 (SLC25A17), nuclear gene encoding mitochondrial protein, mRNAXM_881699PREDICTED: Bos taurus similar to Peroxisomal membrane protein PMP34 (34 kDa peroxisomal membrane protein) (Solute carrier family 25, member 17), transcript variant 5 (LOC506631), mRNA4e-33DV790627, btcn20845 Bt.10808.1.S1_at Bt.10808.1.S1_at
11013:8830_CL1Contig1-B:rNR_002183, NM_003932, NR_002198Homo sapiens family with sequence similarity 10, member A4 (FAM10A4) on chromosome 13XM_881783PREDICTED: Bos taurus similar to heat shock 70kD protein binding protein, transcript variant 6 (LOC510494), mRNA4e-33DY082917.1, btcn20848, DY170076 Bt.15684.1.S1_at Bt.21053.1.A1_at, Bt.15684.1.S1_at, Bt.3616.1.S1_at, Bt.21053.2.S1_at, Bt.9739.1.S1_at, Bt.14175.1.A1_at, Bt.24713.1.S1_at Bt.15684.1.S1_at
11014:8197_16350819-A:fNM_022098Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), mRNAXM_585578PREDICTED: Bos taurus similar to CG9581-PA (LOC539202), mRNA4e-33btcn20875 Bt.22289.1.S1_at (1567 bases away)
11015:1119_7048634-A:fNM_014248Homo sapiens ring-box 1 (RBX1), mRNAXM_597082PREDICTED: Bos taurus similar to RING-box protein 1 (Rbx1), transcript variant 1 (LOC518880), mRNA4e-33btcn20839.2, btcn20840.2, btcn10497, AW478528.2, btcn20843
11016:32331_CL5Contig1-B:fNM_001429Homo sapiens E1A binding protein p300 (EP300), mRNADN529572, btcn20856 Bt.9212.1.A1_at (34976 bases away) Bt.9212.1.A1_at (30863 bases away)
11018:2845_CL1Contig1-B:rNM_001003689 (55 bases away)Homo sapiens l(3)mbt-like 2 (Drosophila) (L3MBTL2), transcript variant 2, mRNAXM_868616PREDICTED: Bos taurus similar to l(3)mbt-like 2 isoform a, transcript variant 2 (LOC513297), mRNA4e-33btcn20850 Bt.26574.1.S1_at
1101:10689_CL2Contig1-B:rNM_152451, NM_001018090, NM_001018100, NM_001018091Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 13, mRNAXM_582363PREDICTED: Bos taurus similar to GRINL1A combined protein isoform 1 (LOC538737), mRNA4e-33btcn19573 Bt.18354.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11021:618_CL1Contig1-B:rNM_002883Homo sapiens Ran GTPase activating protein 1 (RANGAP1), mRNAXM_868640PREDICTED: Bos taurus similar to Ran GTPase-activating protein 1, transcript variant 2 (LOC616055), mRNA4e-33btcn20865 Bt.11079.1.A1_at
11022:7759_CL2Contig1-B:fNM_017590Homo sapiens zinc finger CCCH-type containing 7B (ZC3H7B), mRNAXM_613763PREDICTED: Bos taurus similar to zinc finger CCCH-type containing 7B (LOC534109), mRNA4e-33btcn20862 Bt.2670.1.S1_at (3698 bases away)
11023:141_7426224-A:fNM_003216Homo sapiens thyrotrophic embryonic factor (TEF), mRNAXM_881866PREDICTED: Bos taurus similar to thyrotroph embryonic factor isoform 2, transcript variant 2 (LOC616076), mRNA4e-33AW660397 Bt.2670.1.S1_at (5101 bases away)
11024:18460_CL2Contig1-A:fNR_002936, NM_016272Homo sapiens transducer of ERBB2, 2 pseudogene (LOC222699) on chromosome 6XM_584633PREDICTED: Bos taurus similar to Tob2 protein (Transducer of erbB-2 2), transcript variant 1 (LOC507934), mRNA4e-33btcn20859, btcn20858 Bt.1563.2.S1_at, Bt.1563.1.S1_at Bt.1563.2.S1_at, Bt.1563.1.S1_at
11025:2187_CL1Contig2-B:rNM_032758Homo sapiens PHD finger protein 5A (PHF5A), mRNAXM_583749PREDICTED: Bos taurus similar to transcription factor INI (LOC507180), mRNA1e-30btcn20854, btcn20853 Bt.22471.1.S1_at Bt.22471.1.S1_at
11026:7632_CL1Contig1-B:rNM_002676 (13 bases away)Homo sapiens phosphomannomutase 1 (PMM1), mRNAXM_881962PREDICTED: Bos taurus similar to Phosphomannomutase 1 (PMM 1), transcript variant 5 (LOC537070), mRNA4e-33btcn38893 Bt.21911.1.S1_at
11027:7692_CL2Contig1-B:fNM_014460 (210 bases away)Homo sapiens cold shock domain containing C2, RNA binding (CSDC2), mRNAbtcn38895, btcn9508.7 Bt.21180.1.S1_at Bt.21180.1.S1_at (891 bases away)
11028:27388_CL3Contig1-B:fNM_170694, NM_014509Homo sapiens serine hydrolase-like 2 (SERHL2), mRNAXM_610497PREDICTED: Bos taurus similar to serine hydrolase-like 2 (LOC531992), mRNA4e-27btcn6898, btcn6897, btcn6895 Bt.23068.1.S1_at Bt.23068.1.S1_at (1965 bases away) Bt.23068.1.S1_at (1161 bases away)
11029:8690_CL2Contig1-B:fNM_032311, NM_178136Homo sapiens polymerase (DNA-directed), delta interacting protein 3 (POLDIP3), transcript variant 1, mRNAXM_590255PREDICTED: Bos taurus similar to DNA polymerase delta interacting protein 3 isoform 2, transcript variant 1 (LOC512693), mRNA4e-33btcn6891, DV911704, btcn6890, btcn6892, AW654501 Bt.10436.1.S1_at, Bt.6380.1.S1_at Bt.6380.1.S1_at Bt.6380.1.S1_at Bt.6380.1.S1_at Bt.6380.1.S1_at (3399 bases away)
1102:11946_CL2Contig1-B:fNM_207037, NM_003205, NM_207040, NM_207038, NM_207036Homo sapiens transcription factor 12 (HTF4, helix-loop-helix transcription factors 4) (TCF12), transcript variant 3, mRNAXM_866073PREDICTED: Bos taurus similar to transcription factor 12 isoform c, transcript variant 2 (LOC509039), mRNA4e-33btcn19579, DV787184, btcn19578 Bt.3940.1.S1_at, Bt.18934.1.A1_at Bt.3940.1.S1_at (18450 bases away) Bt.3940.1.S1_at (12283 bases away)
11030:483_CL1Contig2-A:rNM_007326, NM_000398Homo sapiens cytochrome b5 reductase 3 (CYB5R3), transcript variant M, mRNAXM_593854PREDICTED: Bos taurus similar to NADH-cytochrome b5 reductase (B5R) (Diaphorase-1) (Cytochrome b5 reductase 3) (LOC515773), mRNA4e-33btcn6886, DN526516, btcn6887, btcn6888 Bt.4873.1.S1_at Bt.4873.1.S1_at (13819 bases away) Bt.4873.1.S1_at Bt.4873.1.S1_at (13465 bases away)
11031:8047_CL2Contig1-B:rXM_882131PREDICTED: Bos taurus similar to protein kinase C and casein kinase substrate in neurons 2, transcript variant 11 (LOC540107), mRNA4e-33
11032:18278_29254757-B:rNM_012263, NM_001008572Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 1, mRNAXM_882197PREDICTED: Bos taurus similar to tubulin tyrosine ligase-like 1 (predicted), transcript variant 5 (LOC539530), mRNA4e-33btcn32294, btcn32293 Bt.3125.1.S1_at Bt.3125.1.S1_at
11034:19422_CL1Contig3-B:fNM_173467, NM_014507Homo sapiens malonyl-CoA:acyl carrier protein transacylase, mitochondrial (MT), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNAXM_882280PREDICTED: Bos taurus similar to Malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor (MCT) (Mitochondrial malonyltransferase), transcript variant 5 (LOC508130), mRNA4e-33btcn32289, btcn32290, btcn32288 Bt.27223.2.S1_a_at Bt.27223.2.S1_a_at, Bt.27223.1.S1_at Bt.27223.2.S1_a_at, Bt.27223.1.S1_at
11035:19759_CL1Contig1-A:rNM_007311 (1130 bases away)Homo sapiens translocator protein (18kDa) (TSPO), transcript variant PBR-S, mRNANM_175776Bos taurus benzodiazepine receptor (peripheral) (BZRP), mRNA3e-28btcn32286 Bt.3988.1.S1_at
11036:1799_CL1Contig1-B:rNM_015140Homo sapiens tubulin tyrosine ligase-like family, member 12 (TTLL12), mRNAXM_588631PREDICTED: Bos taurus similar to CG1550-PA, transcript variant 1 (LOC511319), mRNA4e-33btcn32285 Bt.12406.1.S1_at
11037:45360_CL497Contig1-B:rNM_173050Homo sapiens signal peptide, CUB domain, EGF-like 1 (SCUBE1), mRNAXM_601818PREDICTED: Bos taurus similar to signal peptide-CUB domian-EGF-related 1 (LOC523518), mRNA4e-33btcn32292 Bt.12406.1.S1_at (33039 bases away)
1103:30053_28291429-B:fNM_001040453, NM_001040450Homo sapiens family with sequence similarity 63, member B (FAM63B), transcript variant 1, mRNAXM_603081PREDICTED: Bos taurus similar to Y55F3AM.9 (LOC524749), mRNA4e-33btcn26024 Bt.26428.1.A1_at
11041:10135_9602336-A:fNM_025225Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), mRNAXM_583061PREDICTED: Bos taurus similar to adiponutrin (LOC506591), mRNA2e-26BE482803 Bt.21291.1.S1_at (35693 bases away)
11043:1124_CL1Contig2-B:rNM_014351Homo sapiens sulfotransferase family 4A, member 1 (SULT4A1), mRNAbtcn949, DT894527 Bt.21291.1.S1_at (140350 bases away) Bt.21291.1.S1_at (158702 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11044:1181_CL1Contig1-A:rNM_198856, NM_022785Homo sapiens CAP-binding protein complex interacting protein 1 (FLJ23588), transcript variant 1, mRNAXM_615477PREDICTED: Bos taurus similar to CAP-binding protein complex interacting protein 1 isoform a (LOC535401), mRNA4e-33btcn951 Bt.26833.1.S1_at (119219 bases away)
11045:5464_CL5Contig1-B:rNM_001017529, NM_181334, NM_001017528, NM_015366, NM_001017530, NM_181333Homo sapiens proline rich 5 (renal) (PRR5), transcript variant 2, mRNAXM_869087PREDICTED: Bos taurus similar to PRR5-ARHGAP8 fusion protein, transcript variant 2 (LOC509593), mRNA4e-33btcn22582, DY212480 Bt.20552.1.S1_at Bt.20552.1.S1_at (7845 bases away)
11046:5464_61764470-A:fNM_181335 (771 bases away)Homo sapiens Rho GTPase activating protein 8 (ARHGAP8), transcript variant 2, mRNAXM_586590PREDICTED: Bos taurus similar to PRR5-ARHGAP8 fusion protein, transcript variant 1 (LOC509593), mRNA4e-33btcn22580, CR552143, btcn22581 Bt.23349.1.A1_a_at, Bt.23349.2.S1_at Bt.23349.1.A1_a_at Bt.23349.1.A1_a_at, Bt.23349.2.S1_at
11047:5990_CL1Contig1-B:fNM_007172, NM_153645Homo sapiens nucleoporin 50kDa (NUP50), transcript variant 2, mRNANM_001038048Bos taurus nucleoporin 50kDa (NUP50), mRNA4e-33btcn22578, btcn22579 Bt.22695.1.S1_at Bt.22695.1.S1_at
11048:38840_CL1Contig1-A:fNM_007172, NM_153645Homo sapiens nucleoporin 50kDa (NUP50), transcript variant 2, mRNAbtcn22574 Bt.9798.1.S1_at
11049:312_CL1Contig1-B:fNM_015264, NM_001009880Homo sapiens chromosome 22 open reading frame 9 (C22orf9), transcript variant 1, mRNAbtcn22576, AV618176, btcn22575 Bt.3320.1.S1_at Bt.3320.1.S1_at (725 bases away) Bt.3320.1.S1_at (762 bases away)
11050:5568_304260-A:fNM_006953Homo sapiens uroplakin 3A (UPK3A), mRNANM_174709Bos taurus uroplakin 3 (UPK3A), mRNA4e-33btcn22587 Bt.13927.2.S1_at (35023 bases away)
11052:10135_18531745-A:fNM_025225Homo sapiens patatin-like phospholipase domain containing 3 (PNPLA3), mRNAXM_583061PREDICTED: Bos taurus similar to adiponutrin (LOC506591), mRNA4e-33btcn953 Bt.21291.1.S1_at (60779 bases away)
11053:879_CL1Contig2-B:rXM_871100PREDICTED: Bos taurus similar to SAM50-like protein CGI-51 (LOC618777), mRNA4e-33
11054:7278_CL1Contig1-B:fNM_014346Homo sapiens TBC1 domain family, member 22A (TBC1D22A), mRNAXM_871106PREDICTED: Bos taurus similar to TBC1 domain family, member 22A (LOC618784), mRNA4e-33btcn55620, DT809967 Bt.12690.1.S1_at Bt.12690.1.S1_at, Bt.12690.2.S1_at
11055:15314_CL1Contig3-B:fNM_001038213Bos taurus similar to tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 isoform a (MGC133954), mRNA4e-33
11056:19041_CL1Contig2-B:rXM_584597PREDICTED: Bos taurus similar to G-2 and S-phase expressed 1 (LOC507901), mRNA4e-33
11057:11628_9723870-A:rNM_001008917 (21107 bases away)Homo sapiens similar to RIKEN cDNA 2210021J22 (LOC150383), transcript variant 2, mRNAXM_583764PREDICTED: Bos taurus similar to Polycystic kidney disease and receptor for egg jelly related protein precursor (PKD and REJ homolog) (LOC538935), mRNA4e-33AV601550.1 Bt.16428.1.S1_at (22033 bases away)
11059:19359_CL2Contig1-B:rNM_207327 (178 bases away)Homo sapiens similar to RIKEN cDNA 2210021J22 (LOC150383), transcript variant 1, mRNAXM_617528PREDICTED: Bos taurus similar to Polycystic kidney disease and receptor for egg jelly related protein precursor (PKD and REJ homolog) (LOC537366), mRNA1e-30btcn55655 Bt.16428.1.S1_at (404 bases away)
1105:5953_15633577-A:fNM_001882Homo sapiens corticotropin releasing hormone binding protein (CRHBP), mRNAXM_591399PREDICTED: Bos taurus similar to corticotropin releasing hormone binding protein (LOC540087), mRNA4e-33btcn33719 Bt.25599.1.A1_at
11060:209_CL10Contig1-B:rNM_005036, NM_001001929, NM_001001930, NM_001001928Homo sapiens peroxisome proliferative activated receptor, alpha (PPARA), transcript variant 5, mRNANM_001034036Bos taurus peroxisome proliferative activated receptor, alpha isoform 1 (PPARA), mRNA4e-33btcn55646 Bt.12803.1.S1_at, Bt.18241.1.A1_at
11061:12163_CL1Contig1-B:fNM_013236Homo sapiens ataxin 10 (ATXN10), mRNAAJ814481, btcn55630, btcn55631, AV590687 Bt.22019.1.S1_at Bt.22019.1.S1_at Bt.22019.1.S1_at Bt.22019.1.S1_at
11062:8813_CL1Contig2-B:rNM_006486, NM_001996Homo sapiens fibulin 1 (FBLN1), transcript variant C, mRNAXM_882469PREDICTED: Bos taurus similar to fibulin 1 isoform C precursor, transcript variant 2 (LOC514588), mRNA4e-33DY102517, btcn55626, DV795687, btcn55627 Bt.22545.1.S1_a_at Bt.16367.1.A1_at, Bt.22545.1.S1_a_at, Bt.22545.2.S1_at Bt.16367.1.A1_at, Bt.22545.1.S1_a_at, Bt.22545.2.S1_at Bt.22545.1.S1_a_at
11063:3585_10387289-A:fNM_015381Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 (FAM19A5), mRNAbtcn24001 Bt.25666.1.A1_at
11064:16454_CL2Contig1-B:rNM_003384Homo sapiens vaccinia related kinase 1 (VRK1), mRNANM_001038224Bos taurus vaccinia related kinase 1 (VRK1), mRNA4e-33DV776835, DV782011, btcn35567 Bt.11497.1.A1_at Bt.11497.1.A1_at Bt.11497.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11065:3264_CL2Contig1-A:fXM_928549 (10625 bases away)PREDICTED: Homo sapiens similar to Hypothetical acrosin-like protease (LOC645529), mRNAbtcn35645 Bt.25856.1.A1_at
11066:5134_CL8Contig1-A:rXM_946142, XM_037493PREDICTED: Homo sapiens SH3 and multiple ankyrin repeat domains 3, transcript variant 1 (SHANK3), mRNAXM_589942PREDICTED: Bos taurus similar to SH3/ankyrin domain gene 3 (LOC512428), mRNA4e-33btcn35628 Bt.26898.1.S1_at (1759 bases away)
11067:5134_24333238-A:fXM_946142, XM_037493PREDICTED: Homo sapiens SH3 and multiple ankyrin repeat domains 3, transcript variant 1 (SHANK3), mRNAXM_589942PREDICTED: Bos taurus similar to SH3/ankyrin domain gene 3 (LOC512428), mRNA4e-33btcn35639 Bt.1076.1.S1_at (18329 bases away)
11068:1_CL1Contig5-B:rNM_000487Homo sapiens arylsulfatase A (ARSA), mRNAXM_882502PREDICTED: Bos taurus similar to Arylsulfatase A precursor (ASA) (Cerebroside-sulfatase), transcript variant 3 (LOC505514), mRNA4e-33btcn35580, btcn35581 Bt.1076.1.S1_at (885 bases away) Bt.1076.1.S1_at
11069:5734_CL1Contig1-B:rNM_152253, NM_005198, NM_152247Homo sapiens choline kinase beta (CHKB), transcript variant 1, mRNAXM_882547PREDICTED: Bos taurus similar to Choline/ethanolamine kinase, transcript variant 6 (LOC536213), mRNA4e-33btcn35573, DV919619, btcn35574, DY064202, btcn35575, btcn35571, btcn35572 Bt.8867.1.S1_at Bt.8867.1.S1_at Bt.8867.1.S1_at Bt.8867.1.S1_at Bt.8867.1.S1_at Bt.8867.1.S1_at Bt.8867.1.S1_at
1106:12069_CL1Contig2-B:fNM_018046Homo sapiens angiogenic factor with G patch and FHA domains 1 (AGGF1), mRNAXM_580950PREDICTED: Bos taurus similar to angiogenic factor VG5Q (LOC504779), mRNA4e-33btcn33710 Bt.26680.1.S1_at
11070:36357_CL1Contig2-B:rXM_371474, XM_938245PREDICTED: Homo sapiens plexin B2 (PLXNB2), mRNAXM_882671PREDICTED: Bos taurus similar to Plexin B2 precursor (MM1), transcript variant 4 (LOC508175), mRNA4e-33btcn35584, btcn35585, DY175736 Bt.3323.1.S1_at, Bt.3323.2.S1_at Bt.3323.1.S1_at, Bt.3323.2.S1_at Bt.3323.1.S1_at (140 bases away)
11072:820_CL4Contig1-B:rNM_002969Homo sapiens mitogen-activated protein kinase 12 (MAPK12), mRNAXM_882708PREDICTED: Bos taurus similar to Mitogen-activated protein kinase 12 (Extracellular signal-regulated kinase 6) (ERK-6) (ERK5) (Stress-activated protein kinase-3) (Mitogen-activated protein kinase p38 gamma) (MAP kinase p38 gamma), transcript variant 4 (LOC512943), mRNA4e-33BE757891, btcn35623, btcn35625 Bt.22442.2.S1_a_at Bt.22442.2.S1_a_at Bt.22442.2.S1_a_at, Bt.22442.3.S1_a_at
11073:11669_CL2Contig2-B:fNM_032019Homo sapiens histone deacetylase 10 (HDAC10), mRNAXM_869532PREDICTED: Bos taurus similar to Histone deacetylase 10 (HD10), transcript variant 2 (LOC510654), mRNA1e-30btcn35614, btcn35612, BI681823 Bt.24581.2.S1_a_at, Bt.24581.1.S1_at Bt.24581.1.S1_at Bt.24581.1.S1_at (107 bases away)
11074:10703_7422244-A:rNM_001008658, NM_020461Homo sapiens tubulin, gamma complex associated protein 6 (TUBGCP6), transcript variant 1, mRNAAW656418 Bt.6099.2.S1_at (7652 bases away)
11076:10703_CL1Contig1-B:rNM_001008658, NM_020461Homo sapiens tubulin, gamma complex associated protein 6 (TUBGCP6), transcript variant 1, mRNADT838853, btcn35610 Bt.6099.1.S1_at, Bt.6099.2.S1_at Bt.6099.1.S1_at, Bt.6099.2.S1_at
11078:15269_CL2Contig1-B:fNM_031454Homo sapiens selenoprotein O (SELO), mRNAbtcn35602 Bt.6099.1.S1_at (127 bases away)
11079:10770_CL1Contig1-B:fNM_025204Homo sapiens TraB domain containing (TRABD), mRNANM_001034452Bos taurus similar to CG12360-PA, isoform A (PP2447), mRNA4e-33CK838291, btcn35621, BE479945 Bt.16469.3.S1_at, Bt.16469.2.S1_at Bt.16469.3.S1_at, Bt.16469.1.S1_at, Bt.16469.2.S1_at Bt.16469.2.S1_at
1107:14479_CL2Contig1-B:rNM_001029854, NM_003719, NM_001029851, NM_001029853, NM_001029852Homo sapiens phosphodiesterase 8B (PDE8B), transcript variant 1, mRNAbtcn33703, AJ691133 Bt.8518.2.A1_at, Bt.8518.1.S1_at Bt.8518.2.A1_at, Bt.8518.1.S1_at
11080:2398_9922825-A:rNM_052839Homo sapiens pannexin 2 (PANX2), mRNAXM_584601PREDICTED: Bos taurus similar to pannexin 2 (LOC539070), mRNA1e-30btcn35561 Bt.16469.3.S1_at (8823 bases away)
11081:11234_CL2Contig1-B:fNM_018995Homo sapiens Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (MOV10L1), mRNAXM_600608PREDICTED: Bos taurus similar to MOV10-like 1, transcript variant 1 (LOC522328), mRNA4e-33DT841027, btcn35605 Bt.16469.3.S1_at (25353 bases away) Bt.16469.3.S1_at (25816 bases away)
11082:7934_CL1Contig1-B:rNM_018995 (7818 bases away)Homo sapiens Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (MOV10L1), mRNAXM_871231PREDICTED: Bos taurus similar to megalencephalic leukoencephalopathy with subcortical cysts 1 gene product (LOC618918), mRNA1e-30btcn35587, DN517759, btcn35588 Bt.10115.1.S1_at (8395 bases away) Bt.10115.1.S1_at Bt.10115.1.S1_at
11083:2089_CL2Contig2-A:f
11084:15694_CL1Contig1-B:rXM_593204PREDICTED: Bos taurus similar to cysteine-rich with EGF-like domains 1, transcript variant 1 (LOC515222), mRNA4e-33
11085:16475_CL1Contig2-A:rXM_607012PREDICTED: Bos taurus similar to alpha-1,6-mannosyltransferase ALG12 (LOC528586), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11086:11923_45059091-A:fXM_581930PREDICTED: Bos taurus similar to Zinc finger BED domain containing protein 4 (LOC505614), mRNA4e-33
11087:3139_CL3Contig1-B:fXM_882769PREDICTED: Bos taurus similar to bromodomain containing protein 1, transcript variant 2 (LOC533517), mRNA4e-33
11088:9480_CL2Contig1-B:rNM_032230Homo sapiens chromosome 12 open reading frame 26 (C12orf26), mRNAXM_865263PREDICTED: Bos taurus similar to CG33154-PB, isoform B, transcript variant 2 (LOC513885), mRNA4e-33btcn34090 Bt.24831.1.S1_at, Bt.26570.1.S1_at
1108:20483_CL1Contig2-B:fNM_018268Homo sapiens WD repeat domain 41 (WDR41), mRNAXM_592837PREDICTED: Bos taurus similar to WD repeat domain 41 (LOC514919), mRNA1e-30btcn33695, btcn33696 Bt.16334.2.S1_a_at, Bt.16334.3.A1_at Bt.16334.1.S1_at, Bt.16334.2.S1_a_at
11090:4429_CL1Contig1-B:rNM_001920, NM_133504, NM_133507, NM_133505, NM_133503, NM_133506Homo sapiens decorin (DCN), transcript variant A1, mRNANM_173906Bos taurus DCN protein (DCN), mRNA4e-33DV781537, btcn36984, btcn36982, DV781683 Bt.23178.1.S2_at Bt.23178.1.S2_at, Bt.23178.1.S1_at Bt.23178.1.S2_at, Bt.23178.1.S1_at Bt.23178.1.S2_at, Bt.23178.1.S1_at
11091:4429_7056051-A:fNM_004950Homo sapiens dermatan sulfate proteoglycan 3 (DSPG3), mRNANM_174307Bos taurus dermatan sulfate proteoglycan 3 (DSPG3), mRNA4e-33AW485945, btcn9436, DV892672 Bt.599.1.S1_at (54 bases away) Bt.599.1.S1_at Bt.5391.1.S1_at, Bt.599.1.S1_at, Bt.2452.1.S1_at
11092:23212_CL1Contig2-B:rNM_001682, NM_001001323Homo sapiens ATPase, Ca++ transporting, plasma membrane 1 (ATP2B1), transcript variant 2, mRNADV781947, btcn35, btcn39 Bt.8872.1.S2_at, Bt.8872.1.S1_at Bt.16710.2.S1_at, Bt.8872.1.S2_at, Bt.8872.1.S1_at, Bt.16710.1.A1_at Bt.8872.1.S1_at, Bt.19227.1.S1_at, Bt.19227.2.A1_at
11093:45360_CL513Contig1-B:fNM_172240Homo sapiens WD repeat domain 51B (WDR51B), mRNAXM_603483PREDICTED: Bos taurus similar to WD repeat domain 51B (LOC525136), mRNA4e-33btcn26 Bt.20333.2.S1_at, Bt.20333.1.S1_at
11094:1523_CL1Contig4-B:rXM_876577PREDICTED: Bos taurus similar to dual specificity phosphatase 6 isoform a, transcript variant 5 (LOC515310), mRNA4e-33
11095:7086_CL1Contig1-B:rNM_173945Bos taurus neurotensin (NTS), mRNA4e-33
11096:4429_CL19Contig1-B:fNM_004950Homo sapiens dermatan sulfate proteoglycan 3 (DSPG3), mRNANM_174307Bos taurus dermatan sulfate proteoglycan 3 (DSPG3), mRNA4e-33btcn9436, DV892672 Bt.599.1.S1_at Bt.5391.1.S1_at, Bt.599.1.S1_at, Bt.2452.1.S1_at
11097:4429_CL3Contig1-B:fNM_002345Homo sapiens lumican (LUM), mRNANM_173934Bos taurus lumican (LUM), mRNA4e-33btcn33637, DV892672, DV781842 Bt.2452.1.S1_at Bt.5391.1.S1_at, Bt.599.1.S1_at, Bt.2452.1.S1_at Bt.2452.1.S1_at (3335 bases away)
11098:4429_CL9Contig1-B:rNM_007035Homo sapiens keratocan (KERA), mRNANM_173910Bos taurus keratocan (KERA), mRNA4e-33DV892672, btcn33638 Bt.5391.1.S1_at, Bt.599.1.S1_at, Bt.2452.1.S1_at Bt.5391.1.S1_at
11099:3863_45471985-A:fNM_001731Homo sapiens B-cell translocation gene 1, anti-proliferative (BTG1), mRNANM_173999Bos taurus B-cell translocation gene 1, anti-proliferative (BTG1), mRNA4e-33DY175025, btcn12452, DV792272, DV775449, DV777401, DV778931, btcn12451, DV780717 Bt.4725.1.S1_at Bt.4725.1.S1_at Bt.4725.1.S1_at Bt.4725.1.S1_at Bt.4725.1.S1_at Bt.4725.1.S1_at Bt.4725.1.S1_at Bt.4725.1.S1_at
1109:18597_CL1Contig1-A:fNM_175803Bos taurus tubulin cofactor a (TBCA), mRNA4e-33
11100:13462_CL2Contig1-A:fNM_001040624, NM_001040630, NM_001040627, NM_001040629, NM_001040628, NM_001040626, NM_032041, NM_001040625Homo sapiens neurocalcin delta (NCALD), transcript variant 8, mRNANM_174398Bos taurus neurocalcin delta (NCALD), mRNA1e-30btcn36976, btcn36977, btcn49444 Bt.25639.1.A1_at (29054 bases away) Bt.25639.1.A1_at (29051 bases away) Bt.25639.1.A1_at (29051 bases away)
11101:18393_CL1Contig1-B:rNM_003805Homo sapiens CASP2 and RIPK1 domain containing adaptor with death domain (CRADD), mRNAXM_867686PREDICTED: Bos taurus similar to Death domain containing protein CRADD (Caspase and RIP adaptator with death domain) (RIP associated protein with a death domain) (LOC615788), mRNA4e-33btcn6110 Bt.755.1.S1_at
11102:36357_CL4Contig1-A:fNM_005761Homo sapiens plexin C1 (PLXNC1), mRNAbtcn6107 Bt.8268.1.A1_at (33781 bases away)
11103:29764_CL2Contig1-B:rNM_001042399, NM_016122Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 1, mRNAXM_601505PREDICTED: Bos taurus similar to NY-REN-58 antigen (LOC523209), mRNA4e-33btcn6108 Bt.26968.1.S1_at (1302 bases away)
11104:15489_CL1Contig1-B:fNM_003877Homo sapiens suppressor of cytokine signaling 2 (SOCS2), mRNANM_177523Bos taurus suppressor of cytokine signaling 2 (SOCS2), mRNA4e-33btcn38713 Bt.13273.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11105:13674_CL1Contig1-A:fNM_172178, NM_014050, NM_172177Homo sapiens mitochondrial ribosomal protein L42 (MRPL42), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNANM_001037622Bos taurus similar to Mitochondrial 28S ribosomal protein S32 (S32mt) (MRP-S32) (MGC133556), mRNA4e-33CR850728, DT855067, btcn38708, AM022232 Bt.13866.1.S1_at Bt.13866.1.S1_at Bt.13866.1.S1_at Bt.13866.1.S1_at
11106:45360_CL10Contig1-B:rNM_001012989, NM_003348Homo sapiens ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) (UBE2N), mRNAXM_877186PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2N (homologous to yeast UBC13), transcript variant 4 (LOC541130), mRNA4e-33DT831816, btcn38706 Bt.11161.1.S1_at (416 bases away) Bt.11161.1.S1_at
11107:15214_CL2Contig2-B:fNR_002212Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1 (NUDT4P1) on chromosome 1btcn38709 Bt.22528.1.A1_at, Bt.10043.1.S1_at
11109:19269_CL1Contig1-B:rNM_006741 (925 bases away)Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 1A (PPP1R1A), mRNAbtcn4534, BF076685, btcn4533 Bt.8964.2.S1_a_at Bt.8964.2.S1_a_at Bt.8964.2.S1_a_at
1110:13917_CL5Contig1-B:fNM_003664Homo sapiens adaptor-related protein complex 3, beta 1 subunit (AP3B1), mRNAbtcn33701, btcn33699 Bt.8350.2.S1_at Bt.8350.2.S1_at, Bt.8350.1.S1_at
11110:10483_CL2Contig1-B:fNM_000924Homo sapiens phosphodiesterase 1B, calmodulin-dependent (PDE1B), mRNANM_174415Bos taurus phosphodiesterase 1B, calmodulin-dependent (PDE1B), mRNA4e-33btcn4521 Bt.3910.1.S1_at, Bt.25775.1.A1_at
11111:8941_CL1Contig2-B:rNM_005337Homo sapiens NCK-associated protein 1-like (NCKAP1L), mRNAXM_871809PREDICTED: Bos taurus similar to hematopoietic protein 1, transcript variant 6 (LOC513641), mRNA4e-33btcn4526, btcn4530 Bt.7632.1.S1_a_at Bt.7632.1.S1_a_at
11113:26834_CL1Contig1-B:fNM_005337 (30755 bases away)Homo sapiens NCK-associated protein 1-like (NCKAP1L), mRNANM_001034273Bos taurus similar to Hypothetical UPF0224 protein 1700006H03Rik (MGC127830), mRNA4e-33btcn4511 Bt.27462.1.S1_a_at (42171 bases away)
11114:386_CL1Contig1-B:fNM_002205Homo sapiens integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNAXM_614854PREDICTED: Bos taurus integrin, alpha 5 (fibronectin receptor, alpha polypeptide), transcript variant 3 (ITGA5), mRNA4e-33btcn4504 Bt.15707.1.S1_at
11115:7160_6963148-A:fNM_015481Homo sapiens zinc finger protein 385 (ZNF385), mRNAXM_872608PREDICTED: Bos taurus similar to zinc finger protein 385, transcript variant 7 (LOC540045), mRNA4e-33btcn4535 Bt.8699.1.S1_at (596 bases away)
11116:17377_CL1Contig1-A:fNM_020370Homo sapiens G protein-coupled receptor 84 (GPR84), mRNANM_001038568Bos taurus inflammation-related G protein-coupled receptor EX33 (GPR84), mRNA4e-33btcn4506, btcn4508 Bt.8699.1.S1_at (2013 bases away) Bt.3907.1.S1_at, Bt.3907.1.S2_at
11117:783_CL2Contig1-B:rNM_016057Homo sapiens coatomer protein complex, subunit zeta 1 (COPZ1), mRNANM_174282Bos taurus coatomer protein complex, subunit zeta 1 (COPZ1), mRNA4e-33DY188445, btcn4505, DV870027, btcn4509, btcn4507 Bt.19272.1.A1_at, Bt.3907.1.S1_at Bt.19272.1.A1_at, Bt.3907.1.S1_at Bt.3907.1.S1_at Bt.19272.1.A1_at, Bt.3907.1.S1_at, Bt.3907.1.S2_at Bt.19272.1.A1_at, Bt.3907.1.S1_at
11118:7266_CL2Contig1-B:fNM_006163Homo sapiens nuclear factor (erythroid-derived 2), 45kDa (NFE2), mRNANM_001014923Bos taurus nuclear factor (erythroid-derived 2), 45kDa (NFE2), mRNA4e-33btcn4541 Bt.24217.1.S1_at
11119:40390_CL1Contig1-A:rNR_002944, XM_939955, XM_936790, XM_939887, XM_941701, XM_372050, XM_062025, XM_933625, XM_931504, XM_944059, XM_940840, XM_944055, XM_928473, XM_944042, NR_002943, NM_001011724, XM_933609, XM_940972, NM_002136, XM_370982, XM_937967, NM_001011725, XM_938431, XM_933616, XM_933604, XM_944037, XM_944051, XM_933613, XM_931498, NM_031157, XM_379885, XM_928068, XM_293570, XM_937144, XM_933622, XM_926703, XM_928701, XM_208373Homo sapiens heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), transcript variant 1, mRNAXM_873053PREDICTED: Bos taurus similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed), transcript variant 3 (LOC615538), mRNA1e-24btcn4496, btcn13754, DV781123, btcn4495, DV776402, btcn4497, DV796456, btcn21109.7 Bt.24217.1.S1_at (1814 bases away) Bt.24217.1.S1_at (4041 bases away) Bt.24217.1.S1_at (4068 bases away) Bt.24217.1.S1_at (4216 bases away) Bt.24217.1.S1_at (4640 bases away) Bt.24217.1.S1_at (1814 bases away) Bt.24217.1.S1_at (4640 bases away) Bt.24217.1.S1_at (4360 bases away)
1111:2519_CL9Contig1-B:rNM_052822, NM_004866Homo sapiens secretory carrier membrane protein 1 (SCAMP1), transcript variant 1, mRNAXM_615414PREDICTED: Bos taurus similar to Secretory carrier-associated membrane protein 1 (Secretory carrier membrane protein 1) (LOC535352), mRNA4e-33BC102448, btcn33705 Bt.3015.2.S1_at, Bt.3015.1.A1_at, Bt.15732.1.S1_at, Bt.22302.1.S1_at, Bt.15732.1.S1_a_at Bt.22302.1.S1_at (1667 bases away)
11120:17119_CL2Contig1-B:fNM_012117Homo sapiens chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5), mRNAXM_583450PREDICTED: Bos taurus chromobox-like protein 5, transcript variant 1 (LOC538885), mRNA4e-33btcn4492 Bt.24217.1.S1_at (8868 bases away)
11121:13504_47683437-A:fNM_014311Homo sapiens single-strand-selective monofunctional uracil-DNA glycosylase 1 (SMUG1), mRNANM_001014958Bos taurus single-strand selective monofunctional uracil DNA glycosylase (smug1), mRNA4e-33btcn4522 Bt.20544.1.S1_at
11122:40132_CL1Contig1-A:rNM_014620 (21026 bases away)Homo sapiens homeobox C4 (HOXC4), transcript variant 1, mRNADN276424, btcn4539 Bt.24837.1.A1_at Bt.24837.1.A1_at (7800 bases away)
11123:2248_CL1Contig1-B:rNM_006159Homo sapiens NEL-like 2 (chicken) (NELL2), mRNANM_176613Bos taurus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 2 (ATP5G2), mRNA4e-33btcn52415, DN536243.1, btcn4502.1, btcn52417.1, DV877899.1 Bt.8804.1.S1_at (149549 bases away) Bt.8804.1.S1_at (322030 bases away) Bt.8804.1.S1_at (321919 bases away) Bt.8804.1.S1_at (321934 bases away) Bt.8804.1.S1_at (322107 bases away)
11124:18791_CL1Contig1-B:fNM_017599Homo sapiens vezatin, adherens junctions transmembrane protein (VEZT), mRNAXM_865102PREDICTED: Bos taurus similar to Vezatin, transcript variant 2 (LOC535351), mRNA4e-33BI538592, btcn42990 Bt.13353.1.A1_at Bt.13353.1.A1_at, Bt.19596.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11125:32575_9601594-A:rNM_018351Homo sapiens FYVE, RhoGEF and PH domain containing 6 (FGD6), mRNAXM_587549PREDICTED: Bos taurus similar to FYVE, RhoGEF and PH domain containing protein 6 (Zinc finger FYVE domain containing protein 24) (LOC539481), mRNA2e-19btcn43013.1 Bt.28215.1.S1_at (78166 bases away)
11126:15725_CL1Contig2-A:rXM_588738PREDICTED: Bos taurus similar to Orphan nuclear receptor TR2, transcript variant 1 (LOC511407), mRNA4e-33
11127:6394_CL1Contig2-B:rXM_865931PREDICTED: Bos taurus similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2) (LOC614435), mRNA4e-33
11128:680_CL1Contig1-B:rNM_001616 (1381855 bases away)Homo sapiens activin A receptor, type IIA (ACVR2A), mRNANM_174306Bos taurus 13kDa differentiation-associated protein (DAP13), mRNA4e-33btcn42995.3, btcn47334.1 Bt.19243.2.S1_at (365790 bases away) Bt.19243.2.S1_at (365886 bases away)
1112:16033_56141730-A:fNM_005779Homo sapiens lipoma HMGIC fusion partner-like 2 (LHFPL2), mRNAXM_868096PREDICTED: Bos taurus similar to lipoma HMGIC fusion partner-like 2 (LOC616131), mRNA4e-33CV981009 Bt.15732.1.S1_a_at (23890 bases away)
11130:29790_CL3Contig1-B:fNM_020698Homo sapiens transmembrane and coiled-coil domain family 3 (TMCC3), mRNANM_001038063Bos taurus transmembrane and coiled-coil domain family 3 (TMCC3), mRNA4e-33DV830544, btcn42998, btcn43001 Bt.28414.1.A1_at (92460 bases away) Bt.28414.1.A1_at (81869 bases away) Bt.28414.1.A1_at (92178 bases away)
11131:8238_CL1Contig1-A:rNM_001042403, NM_032147Homo sapiens ubiquitin specific peptidase 44 (USP44), transcript variant 1, mRNAXM_595186PREDICTED: Bos taurus similar to ubiquitin specific protease 44, transcript variant 1 (LOC517022), mRNA3e-28btcn25675 Bt.21675.1.S1_at (14227 bases away)
11132:16471_10762356-B:fNM_006838Homo sapiens methionyl aminopeptidase 2 (METAP2), mRNANM_001040493Bos taurus similar to methionyl aminopeptidase 2 (METAP2), mRNA4e-33BF045301, btcn25677 Bt.21675.1.S1_at Bt.21675.1.S1_at
11134:16943_CL3Contig2-B:fNM_001005414 (13796 bases away)Homo sapiens ZW10 interactor (ZWINT), transcript variant 4, mRNANM_001035439Bos taurus similar to DKFZP586A0522 protein (MGC128396), mRNA1e-30CK835567, btcn37891, DV788948 Bt.15908.2.S1_a_at, Bt.15908.1.S1_at Bt.15908.2.S1_a_at, Bt.15908.1.S1_at Bt.15908.2.S1_a_at
11135:16943_7054180-A:fNM_000617 (32925 bases away)Homo sapiens solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 (SLC11A2), mRNANM_001035439Bos taurus similar to DKFZP586A0522 protein (MGC128396), mRNA5e-11btcn37900 Bt.26452.1.A1_at (8028 bases away)
11136:5474_60449042-A:fXM_876338PREDICTED: Bos taurus similar to solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2, transcript variant 3 (LOC521189), mRNA4e-33
11137:5597_CL1Contig1-B:rNM_030809Homo sapiens chromosome 12 open reading frame 22 (C12orf22), mRNAXM_595087PREDICTED: Bos taurus similar to TGF-beta induced apotosis protein 12 (LOC516929), mRNA4e-33DV797186, btcn37898 Bt.24718.1.S1_at (3451 bases away) Bt.24718.1.S1_at (2996 bases away)
11138:21620_CL4Contig1-B:rNM_006856Homo sapiens activating transcription factor 7 (ATF7), mRNAXM_615033PREDICTED: Bos taurus similar to Cyclic-AMP-dependent transcription factor ATF-7 (Activating transcription factor 7) (Transcription factor ATF-A), transcript variant 1 (LOC541204), mRNA4e-33btcn38376 Bt.18789.1.S1_at, Bt.18789.2.A1_at
11139:36007_CL1Contig1-A:rNM_003717 (3249 bases away)Homo sapiens neuropeptide FF-amide peptide precursor (NPFF), mRNACB454625.1, btcn38369 Bt.7900.1.S1_at Bt.7900.1.S1_at
1113:1316_CL1Contig1-B:rXM_937011, XM_930309, NM_000046Homo sapiens arylsulfatase B (ARSB), transcript variant 1, mRNAbtcn33693 Bt.18689.2.A1_at, Bt.18689.1.S1_at
11140:39532_5106748-A:fNM_003717Homo sapiens neuropeptide FF-amide peptide precursor (NPFF), mRNANM_174123Bos taurus neuropeptide FF-amide peptide precursor (NPFF), mRNA4e-33AF148699 Bt.220.1.S1_at
11141:2596_CL1Contig1-B:rNM_004178, NM_134323, NM_134324Homo sapiens Tar (HIV-1) RNA binding protein 2 (TARBP2), transcript variant 3, mRNAXM_877872PREDICTED: Bos taurus similar to TAR RNA binding protein 2 isoform a, transcript variant 18 (LOC514674), mRNA4e-33DV915661, btcn38357, DV785642, btcn38358 Bt.4728.1.S1_at Bt.4728.1.S1_at (747 bases away) Bt.4728.1.S1_at Bt.4728.1.S1_at
11142:4332_CL1Contig3-B:fNM_006301Homo sapiens mitogen-activated protein kinase kinase kinase 12 (MAP3K12), mRNAXM_878130PREDICTED: Bos taurus similar to mitogen-activated protein kinase kinase kinase 12, transcript variant 6 (LOC505427), mRNA4e-33btcn38337, btcn38338 Bt.5900.1.S1_at Bt.29962.1.S1_at, Bt.5900.1.S1_at, Bt.29962.2.S1_at, Bt.29962.3.S1_at
11143:1054_CL1Contig1-B:fNM_005016, NM_031989Homo sapiens poly(rC) binding protein 2 (PCBP2), transcript variant 1, mRNAXM_878892PREDICTED: Bos taurus similar to poly(rC) binding protein 2, transcript variant 21 (LOC540653), mRNA4e-33DV778063, DV776283, btcn38330, DV775851, DV777959, DV778147, btcn38339, DV792615, DV795205, btcn38331, btcn38342, btcn38335, DV781931, DV780334, btcn38333 Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at Bt.15711.2.S1_a_at, Bt.15711.1.S1_a_at
11144:15492_CL1Contig1-B:rXM_583023PREDICTED: Bos taurus similar to achalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A) (LOC506561), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11145:8854_CL1Contig2-B:rNM_002624, NM_145897Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 1, mRNANM_174732Bos taurus prefoldin 5 (PFDN5), mRNA4e-33btcn38345, btcn38344, AF520958 Bt.1430.1.S1_at Bt.1430.1.S1_at Bt.1430.1.S1_at
11146:12649_CL1Contig1-B:fNM_012291Homo sapiens extra spindle poles like 1 (S. cerevisiae) (ESPL1), mRNAXM_583229PREDICTED: Bos taurus similar to extra spindle poles like 1 (LOC506740), mRNA4e-33btcn38367, btcn38364 Bt.1181.2.S1_at, Bt.1181.1.S1_at Bt.1181.2.S1_at, Bt.1181.1.S1_at
11147:11202_CL1Contig1-B:fNM_032889Homo sapiens major facilitator superfamily domain containing 5 (MFSD5), mRNAXM_584620PREDICTED: Bos taurus similar to Y54G2A.4 (LOC507921), mRNA1e-30btcn38351, btcn38352 Bt.4187.1.S1_at Bt.4187.1.S1_at
11148:33119_51810105-A:fXM_944829, XM_940838, NM_001042728, NM_000966, XM_944827Homo sapiens retinoic acid receptor, gamma (RARG), transcript variant 1, mRNAXM_593962PREDICTED: Bos taurus similar to Retinoic acid receptor gamma-B (RAR-gamma-B), transcript variant 1 (LOC540425), mRNA6e-26btcn38355 Bt.4187.1.S1_at (15743 bases away)
11149:3518_CL3Contig2-B:rNM_000889Homo sapiens integrin, beta 7 (ITGB7), mRNAXM_591814PREDICTED: Bos taurus similar to Integrin beta-7 precursor (LOC514031), mRNA1e-30btcn38349, btcn38347 Bt.12633.1.S1_at Bt.12633.1.S1_at
1114:26370_CL3Contig1-B:fNM_017614 (2842 bases away)Homo sapiens betaine-homocysteine methyltransferase 2 (BHMT2), mRNAbtcn33732 Bt.18561.1.A1_at (1122 bases away)
11150:23535_CL1Contig1-B:fNM_020228, NM_199439, NM_199438, NM_199437Homo sapiens PR domain containing 10 (PRDM10), transcript variant 1, mRNAXM_584435PREDICTED: Bos taurus similar to PR domain containing 10 isoform 2 (LOC507760), partial mRNA4e-33btcn38379 Bt.18729.1.A1_at
11151:3189_CL1Contig2-A:rXM_614333PREDICTED: Bos taurus similar to Serine/threonine-protein kinase receptor R3 precursor (SKR3) (Activin receptor-like kinase 1) (ALK-1) (TGF-B superfamily receptor type I) (TSR-I) (LOC534536), mRNA4e-33
11153:7429_45483843-A:fNM_181711Homo sapiens GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein (GRASP), mRNAXM_583750PREDICTED: Bos taurus similar to GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein (LOC507181), mRNA4e-33AW483788, btcn46034 Bt.27470.1.A1_at Bt.27470.1.A1_at (372 bases away)
11154:4117_CL1Contig3-B:rNM_002135, NM_173157Homo sapiens nuclear receptor subfamily 4, group A, member 1 (NR4A1), transcript variant 1, mRNAXM_879275PREDICTED: Bos taurus similar to Orphan nuclear receptor NR4A1 (Orphan nuclear receptor HMR) (Early response protein NAK1) (TR3 orphan receptor) (ST-59), transcript variant 3 (LOC528390), mRNA4e-33BC109894, btcn46027 Bt.23373.1.S1_at Bt.23373.1.S1_at
11155:10393_CL1Contig2-B:fNM_021934Homo sapiens chromosome 12 open reading frame 44 (C12orf44), mRNAXM_879400PREDICTED: Bos taurus similar to CG7053-PA, transcript variant 4 (LOC513049), mRNA4e-33BE899760, btcn46009 Bt.5191.1.S1_at (1434 bases away) Bt.5191.1.S1_at
11157:8441_CL1Contig3-B:fNM_199187, NM_000224, NM_173624, XM_939532, XM_929511, XM_928661, XM_937982Homo sapiens keratin 18 (KRT18), transcript variant 1, mRNAXM_582930PREDICTED: Bos taurus similar to Keratin, type I cytoskeletal 18 (Cytokeratin 18) (K18) (CK 18) (LOC506480), mRNA4e-33btcn46001, btcn46003, btcn46002, CB436899, DV784430 Bt.1745.1.S1_at Bt.1745.1.S1_at Bt.1745.1.S1_at Bt.1745.1.S1_at Bt.1745.1.S1_at
11158:22321_CL1Contig3-B:fNM_001417Homo sapiens eukaryotic translation initiation factor 4B (EIF4B), mRNANM_001035028Bos taurus eukaryotic translation initiation factor 4B (EIF4B), mRNA4e-33btcn46004, btcn46006, DV793004, btcn46005, DV777880 Bt.7887.1.S1_at Bt.7887.1.S1_at Bt.7887.1.S1_at Bt.7887.1.S1_at (7 bases away) Bt.7887.1.S1_at
11159:14232_CL1Contig1-B:fNM_015989Homo sapiens cysteine sulfinic acid decarboxylase (CSAD), mRNAXM_594393PREDICTED: Bos taurus similar to cysteine sulfinic acid decarboxylase-related protein 2 (LOC516241), mRNA4e-33BI976074, btcn46041, DY220242 Bt.10371.1.S1_at (193 bases away) Bt.10371.1.S1_at Bt.10371.1.S1_at (43 bases away)
1115:209_CL11Contig1-B:rNM_134262, NM_134261, NM_134260, NM_002943Homo sapiens RAR-related orphan receptor A (RORA), transcript variant 3, mRNAXM_877713PREDICTED: Bos taurus similar to RAR-related orphan receptor A isoform b, transcript variant 3 (LOC535597), mRNA4e-33btcn39436 Bt.24444.1.A1_at, Bt.24444.2.S1_at, Bt.24444.2.S1_a_at
11160:14232_45061619-B:fNM_015989Homo sapiens cysteine sulfinic acid decarboxylase (CSAD), mRNAbtcn46052, btcn46051 Bt.26639.3.S1_at (6190 bases away) Bt.10371.1.S1_at (20600 bases away)
11161:45534_CL1Contig1-A:rNM_001031628, NM_001033873Homo sapiens small trans-membrane and glycosylated protein (LOC57228), transcript variant 1, mRNADY191980, btcn9163, AW446367 Bt.6544.1.S1_at (1045 bases away) Bt.6544.1.S1_at Bt.6544.1.S1_at (649 bases away)
11163:19327_CL1Contig1-A:rNM_014764Homo sapiens DAZ associated protein 2 (DAZAP2), mRNANM_001034701Bos taurus DAZ associated protein 2 (DAZAP2), mRNA4e-33btcn9149, DV886172 Bt.3866.1.S1_at Bt.3866.1.S1_at (777 bases away)
11164:44162_CL1Contig1-A:rNM_002702Homo sapiens POU domain, class 6, transcription factor 1 (POU6F1), mRNAbtcn9166 Bt.3866.1.S1_at (34246 bases away)
11165:44162_29207548-A:rNM_002702Homo sapiens POU domain, class 6, transcription factor 1 (POU6F1), mRNAXM_613160PREDICTED: Bos taurus similar to POU domain, class 6, transcription factor 1 (mPOU homeobox protein) (Brain-specific homeobox/POU domain protein 5) (Brain-5) (Brn-5 protein) (LOC533680), mRNA1e-30CB430969 Bt.3866.1.S1_at (45883 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11166:5428_CL2Contig1-B:fNM_002702 (16055 bases away)Homo sapiens POU domain, class 6, transcription factor 1 (POU6F1), mRNAXM_881014PREDICTED: Bos taurus similar to transcription factor CP2, transcript variant 11 (LOC509448), mRNA4e-33BM430694, btcn9151.1 Bt.3866.1.S1_at (64480 bases away) Bt.3866.1.S1_at (64830 bases away)
11167:45360_CL43Contig1-B:rNM_001971Homo sapiens elastase 1, pancreatic (ELA1), mRNANM_174048Bos taurus elastase 1, pancreatic (ELA1), mRNA4e-33btcn9164 Bt.4522.1.S1_at
11168:42823_CL6Contig1-B:rNM_007210Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (GALNT6), mRNANM_001015534Bos taurus UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (GALNT6), mRNA4e-33btcn9152 Bt.1639.1.S1_at
11169:45360_CL1100Contig1-B:rNM_001039960, NM_004858Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 8 (SLC4A8), transcript variant 2, mRNAXM_881314PREDICTED: Bos taurus similar to solute carrier family 4, sodium bicarbonate cotransporter, member 8, transcript variant 16 (LOC537901), mRNA4e-33btcn9160 Bt.18965.1.A1_at (6 bases away)
1116:25230_CL1Contig1-A:fNM_001018089, NM_024611Homo sapiens NMDA receptor regulated 2 (NARG2), transcript variant 1, mRNAXM_866152PREDICTED: Bos taurus similar to NMDA receptor regulated 2 isoform a, transcript variant 2 (LOC541255), mRNA4e-33btcn39431.1, AM033876 Bt.24444.1.A1_at (46691 bases away) Bt.7709.1.S1_at
11170:25995_CL11Contig1-A:fXM_881398PREDICTED: Bos taurus similar to Sodium channel protein type VIII alpha subunit (Voltage-gated sodium channel alpha subunit Nav1.6), transcript variant 5 (LOC537277), mRNA4e-33
11171:5474_18455281-B:fXM_599449PREDICTED: Bos taurus similar to solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2, transcript variant 1 (LOC521189), mRNA2e-32
11172:18675_CL1Contig1-A:fNM_181708Homo sapiens hypothetical protein LOC144233 (LOC144233), mRNAXM_581970PREDICTED: Bos taurus similar to CG11342-PA (LOC505650), mRNA4e-33CK835976, CB439916, btcn2588 Bt.11290.2.S1_at Bt.11290.2.S1_at Bt.11290.2.S1_at, Bt.11290.1.A1_at
11173:12374_CL2Contig1-A:fXM_937378, XM_035497PREDICTED: Homo sapiens KIAA1602 protein (KIAA1602), mRNAXM_580474PREDICTED: Bos taurus similar to proline-rich protein BstNI subfamily 1 isoform 1 precursor (LOC504364), mRNA4e-33btcn2612 Bt.21882.1.S1_at (4561 bases away)
11174:37652_CL1Contig1-B:fNM_003217Homo sapiens testis enhanced gene transcript (BAX inhibitor 1) (TEGT), mRNAXM_868175PREDICTED: Bos taurus similar to testis enhanced gene transcript (LOC616210), mRNA4e-33btcn2562, btcn2563, DV787030, DV786872, DV788099, DV796381 Bt.2416.1.S1_at, Bt.2416.1.S2_at Bt.2416.1.S1_at, Bt.2416.1.S2_at Bt.2416.1.S1_at Bt.2416.1.S1_at Bt.2416.1.S1_at Bt.2416.1.S1_at
11175:1762_CL2Contig1-B:rNM_198900, NM_175736Homo sapiens formin-like 3 (FMNL3), transcript variant 1, mRNAXM_591526PREDICTED: Bos taurus similar to formin-like 3 protein, transcript variant 1 (LOC540105), mRNA4e-33btcn2590, btcn2589 Bt.1411.1.S1_at Bt.1411.1.S1_at
11176:895_CL2Contig1-B:fNM_198900, NM_175736, NM_001031698, NM_012272Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) (PRPF40B), transcript variant 2, mRNAXM_591527PREDICTED: Bos taurus similar to Huntingtin interacting protein C isoform 1 (LOC513782), mRNA4e-33btcn2584, btcn2586 Bt.5455.1.S1_at, Bt.10357.1.A1_at, Bt.5455.3.S1_a_at, Bt.5455.2.S1_a_at, Bt.10357.2.S1_at Bt.5455.1.S1_at, Bt.5455.3.S1_a_at, Bt.5455.2.S1_a_at
11177:5705_60977809-A:fNM_032130Homo sapiens chromosome 12 open reading frame 25 (C12orf25), mRNAbtcn2599 Bt.10357.1.A1_at (26357 bases away)
1117:45360_CL4Contig1-B:rNM_001002858, NM_001002857, NM_004039Homo sapiens annexin A2 (ANXA2), transcript variant 3, mRNANM_174716Bos taurus annexin A2 (ANXA2), mRNA4e-33btcn39422 Bt.4314.1.S1_at, Bt.10883.1.S1_at
11180:1858_CL1Contig2-B:rNM_001012300, NM_006337Homo sapiens microspherule protein 1 (MCRS1), transcript variant 1, mRNAXM_881546PREDICTED: Bos taurus similar to Microspherule protein 1 (58 kDa microspherule protein) (Cell cycle-regulated factor p78), transcript variant 4 (LOC514410), mRNA4e-33btcn2580, CO879874, btcn2582 Bt.12374.1.S1_at Bt.12374.1.S1_at (575 bases away) Bt.12374.1.S1_at
11181:14668_CL1Contig13-B:rXM_942856, XM_934471, NM_006009Homo sapiens tubulin, alpha 3 (TUBA3), mRNAXM_590059PREDICTED: Bos taurus similar to tubulin, alpha 1, transcript variant 1 (LOC539882), mRNA4e-33CO879834, btcn2576, btcn2577, AV663606, btcn22523.4, btcn13542, btcn2567.3, btcn56367, btcn6502.8, btcn2572.4, btcn49488, btcn39742.5, btcn6061, CX738056, btcn2575.2, btcn2572, btcn2570 Bt.19464.1.A1_at (36070 bases away) Bt.19464.1.A1_at (36484 bases away) Bt.19464.1.A1_at (36335 bases away) Bt.19464.1.A1_at (36611 bases away) Bt.19464.1.A1_at (36483 bases away) Bt.19464.1.A1_at (36277 bases away) Bt.19464.1.A1_at (35126 bases away) Bt.19464.1.A1_at (36548 bases away) Bt.19464.1.A1_at (36477 bases away) Bt.19464.1.A1_at (36603 bases away) Bt.19464.1.A1_at (36143 bases away) Bt.19464.1.A1_at (36470 bases away) Bt.19464.1.A1_at (32995 bases away) Bt.15534.1.S1_a_at (1366 bases away) Bt.19464.1.A1_at (35126 bases away) Bt.15534.1.S1_a_at Bt.19464.1.A1_at (32996 bases away)
11184:14668_CL1Contig1-B:fXM_942856, XM_934471, NM_006009Homo sapiens tubulin, alpha 3 (TUBA3), mRNAbtcn2567.3, DV895979, CO886760, btcn2569.2, DV907666.3, BF043585, btcn6061, btcn2575.2, btcn2568.2, btcn2572, btcn2570 Bt.19464.1.A1_at (35126 bases away) Bt.19464.1.A1_at (34668 bases away) Bt.19464.1.A1_at (34812 bases away) Bt.19464.1.A1_at (35126 bases away) Bt.19464.1.A1_at (35122 bases away) Bt.19464.1.A1_at (33036 bases away) Bt.19464.1.A1_at (32995 bases away) Bt.19464.1.A1_at (35126 bases away) Bt.19464.1.A1_at (35125 bases away) Bt.15534.1.S1_a_at Bt.19464.1.A1_at (32996 bases away)
11185:32199_CL19Contig1-A:fNM_144593Homo sapiens Ras homolog enriched in brain like 1 (RHEBL1), mRNANM_181668Bos taurus Ras homolog enriched in brain like 1 (RHEBL1), mRNA3e-28btcn2611 Bt.22959.1.S1_at
11186:97_CL3Contig1-B:fNM_003482Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 2 (MLL2), mRNAXM_583302PREDICTED: Bos taurus similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein) (LOC506805), mRNA4e-33btcn2614 Bt.20614.1.A1_at
11188:97_CL5Contig1-A:rNM_003482Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 2 (MLL2), mRNAXM_583302PREDICTED: Bos taurus similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein) (LOC506805), mRNA1e-30btcn2608 Bt.13707.1.A1_at (11309 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11189:1950_CL1Contig2-B:rNM_002733, NM_212461Homo sapiens protein kinase, AMP-activated, gamma 1 non-catalytic subunit (PRKAG1), transcript variant 1, mRNANM_174586Bos taurus AMP-activated protein kinase subunit gamma 1 (non-catalytic subunit) (PRKAG1), mRNA4e-33btcn2591 Bt.5588.1.S1_at
1118:12477_CL44Contig1-B:fNM_004998Homo sapiens myosin IE (MYO1E), mRNAXM_601785PREDICTED: Bos taurus similar to myosin IE (LOC523485), mRNA4e-33btcn26240 Bt.16508.1.A1_at, Bt.16508.2.A1_at
11193:15065_CL1Contig1-A:fNM_003394Homo sapiens wingless-type MMTV integration site family, member 10B (WNT10B), mRNAXM_586498PREDICTED: Bos taurus similar to wingless-type MMTV integration site family, member 10B precursor, transcript variant 1 (LOC539337), mRNA4e-33btcn2603 Bt.6354.1.S1_at
11194:25478_CL1Contig1-B:rNM_052879, NM_199188, NM_199190Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 1, mRNAXM_586191PREDICTED: Bos taurus similar to La-related protein 4 (La ribonucleoprotein domain family member 4), transcript variant 4 (LOC539286), mRNA4e-33btcn38551 Bt.19425.1.S1_at
11195:8566_CL2Contig1-A:rNM_016357Homo sapiens LIM domain and actin binding 1 (LIMA1), mRNAXM_882258PREDICTED: Bos taurus similar to Epithelial protein lost in neoplasm, transcript variant 2 (LOC540637), mRNA4e-33btcn21474 Bt.10730.1.S1_at
11196:4566_CL3Contig1-B:fNM_147190Homo sapiens LAG1 longevity assurance homolog 5 (S. cerevisiae) (LASS5), mRNAXM_882294PREDICTED: Bos taurus similar to LAG1 longevity assurance homolog 5, transcript variant 2 (LOC530776), mRNA4e-33btcn21467, btcn21462 Bt.26667.1.S1_at, Bt.8267.1.A1_at Bt.26667.1.S1_at, Bt.8267.1.A1_at
11197:23563_28314172-A:fNM_032901Homo sapiens chromosome 12 open reading frame 62 (C12orf62), mRNAAV617840, DN512030, btcn21477, CB172781, btcn21480, btcn21479 Bt.5002.1.S1_at (2282 bases away) Bt.5002.1.S1_at (2138 bases away) Bt.5002.1.S1_at (2837 bases away) Bt.5002.1.S1_at (5732 bases away) Bt.5002.1.S1_at (2255 bases away) Bt.5002.1.S1_at (6162 bases away)
11198:9467_CL1Contig2-B:rNM_005276Homo sapiens glycerol-3-phosphate dehydrogenase 1 (soluble) (GPD1), mRNANM_001035354Bos taurus GPD1 protein (GPD1), mRNA4e-33btcn21470, btcn21471, CK967385, btcn21468, DY202447 Bt.5002.1.S1_at Bt.5002.1.S1_at (1308 bases away) Bt.11169.1.S1_at (1339 bases away) Bt.5002.1.S1_at (1365 bases away) Bt.5002.1.S1_at (2177 bases away)
11199:7781_CL3Contig1-B:rNM_003076, NM_139071Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (SMARCD1), transcript variant 1, mRNANM_001038559Bos taurus similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin d1 isoform b (MGC133629), mRNA4e-33btcn21458 Bt.11169.1.S1_at
1119:5121_CL2Contig1-B:rNM_004701Homo sapiens cyclin B2 (CCNB2), mRNANM_174264Bos taurus cyclin B2 (CCNB2), mRNA4e-33btcn52669 Bt.41.1.S1_at
111:40618_15376210-A:fXM_941812, XM_930315PREDICTED: Homo sapiens similar to cytochrome P450, family 2, subfamily J, polypeptide 2, B (LOC647265), mRNABI535102 Bt.20007.1.S1_a_at (31282 bases away)
11200:45360_10066670-A:fNM_020039, NM_001095Homo sapiens amiloride-sensitive cation channel 2, neuronal (ACCN2), transcript variant 2, mRNAXM_618443PREDICTED: Bos taurus similar to amiloride-sensitive cation channel 2, neuronal isoform b (LOC538244), mRNA6e-26btcn21484, BE681626 Bt.11169.1.S1_at (15402 bases away) Bt.11169.1.S1_at (20992 bases away)
11202:15335_CL1Contig1-B:fXM_581753PREDICTED: Bos taurus similar to CG6745-PA (LOC505464), mRNA4e-33
11204:14818_CL3Contig1-A:fNM_016123Homo sapiens interleukin-1 receptor-associated kinase 4 (IRAK4), mRNAXM_613175PREDICTED: Bos taurus similar to Interleukin-1 receptor-associated kinase 4 (IRAK-4) (NY-REN-64 antigen) (LOC533692), mRNA4e-33DV787272 Bt.9250.2.S1_at (11174 bases away)
11205:829_CL2Contig1-B:rNM_001025320Bos taurus protein tyrosine kinase 9 (PTK9), mRNA4e-33
11206:45360_CL616Contig1-A:rNM_006262Homo sapiens peripherin (PRPH), mRNACR553002, btcn39735 Bt.22366.1.S1_at (29087 bases away) Bt.22366.1.S1_at (29085 bases away)
11207:12593_CL1Contig3-B:fNM_001024477Bos taurus trophinin associated protein (tastin) (TROAP), mRNA4e-33
11208:6565_9021190-A:fXM_869002PREDICTED: Bos taurus similar to Cerebellin 2 precursor (Cerebellin-like protein) (LOC616876), mRNA6e-23
11209:26682_CL1Contig1-B:rNM_024902 (198 bases away)Homo sapiens hypothetical protein FLJ13236 (FLJ13236), mRNAXM_869293PREDICTED: Bos taurus similar to RIKEN cDNA 2810451A06, transcript variant 2 (LOC515215), mRNA4e-33btcn39736 Bt.13617.2.S1_a_at
1120:2627_CL1Contig1-B:fNM_017610Homo sapiens ring finger protein 111 (RNF111), mRNAXM_593424PREDICTED: Bos taurus similar to ring finger protein 111 (LOC540353), partial mRNA4e-33btcn52668, btcn52666, CN787300 Bt.12088.1.S1_at (826 bases away) Bt.12088.1.S1_at Bt.12088.1.S1_at (1069 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11210:1237_CL1Contig1-B:rNM_024604Homo sapiens hypothetical protein FLJ21908 (FLJ21908), mRNAXM_587785PREDICTED: Bos taurus similar to CG13570-PA (LOC510621), partial mRNA4e-33btcn7810 Bt.20524.1.A1_at
11211:2908_61731415-A:fNM_006025Homo sapiens 26 serine protease (P11), mRNACR851895 Bt.21308.1.A1_at (29058 bases away)
11212:10280_CL1Contig1-B:rNM_006105Homo sapiens Rap guanine nucleotide exchange factor (GEF) 3 (RAPGEF3), mRNAXM_882548PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange factor 3, transcript variant 3 (LOC535383), mRNA4e-33btcn7800 Bt.21308.1.A1_at
11213:18951_CL1Contig1-B:fNM_017842Homo sapiens hypothetical protein FLJ20489 (FLJ20489), mRNAXM_869350PREDICTED: Bos taurus similar to histone deacetylase 7A isoform a, transcript variant 2 (LOC509843), mRNA4e-33btcn7805 Bt.2919.1.S1_a_at (20 bases away)
11214:11669_CL3Contig1-B:rNM_016596, NM_015401Homo sapiens histone deacetylase 7A (HDAC7A), transcript variant 1, mRNAXM_869350PREDICTED: Bos taurus similar to histone deacetylase 7A isoform a, transcript variant 2 (LOC509843), mRNA4e-33btcn7806, btcn7808 Bt.2919.1.S1_at (1590 bases away) Bt.2919.1.S1_at, Bt.2919.1.S1_a_at
11215:9333_7049160-A:fNM_013277Homo sapiens Rac GTPase activating protein 1 (RACGAP1), mRNAAW479054 Bt.19292.1.A1_at (5782 bases away)
11217:18432_CL3Contig1-A:fNM_001651 (351 bases away)Homo sapiens aquaporin 5 (AQP5), mRNAbtcn12943 Bt.16712.1.A1_at
11219:6843_CL3Contig1-B:fNM_012306Homo sapiens Fas apoptotic inhibitory molecule 2 (FAIM2), mRNAXM_586828PREDICTED: Bos taurus similar to Fas apoptotic inhibitory molecule 2 (LOC509790), mRNA4e-33btcn12940, btcn12941 Bt.23228.1.S1_at (39105 bases away) Bt.23228.1.S1_at (2731 bases away)
1121:25562_CL2Contig1-B:fNM_004855Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class B (PIGB), mRNAXM_868007PREDICTED: Bos taurus similar to phosphatidylinositol glycan, class B (LOC616044), partial mRNA4e-30DN528424, btcn39149 Bt.20626.1.A1_at Bt.20626.1.A1_at (855 bases away)
11220:10365_CL1Contig1-B:fNM_183078, NM_003958Homo sapiens ring finger protein 8 (RNF8), transcript variant 1, mRNAXM_882600PREDICTED: Bos taurus similar to Ubiquitin ligase protein RNF8 (RING finger protein 8), transcript variant 2 (LOC515933), mRNA4e-33DN842084, DV788552, btcn12934 Bt.6578.1.A1_a_at (5765 bases away) Bt.6578.1.A1_a_at Bt.6578.3.S1_at, Bt.6578.1.A1_a_at
11221:44195_CL3Contig1-B:rNM_020898Homo sapiens calcium binding and coiled-coil domain 1 (CALCOCO1), mRNAXM_882618PREDICTED: Bos taurus similar to coiled-coil transcriptional coactivator, transcript variant 3 (LOC538675), mRNA4e-33btcn14897, DV797311 Bt.28477.1.S1_at Bt.28477.1.S1_at
11222:11669_CL5Contig1-B:rXM_609807PREDICTED: Bos taurus similar to histone deacetylase 7A isoform a (LOC531315), partial mRNA4e-33
11224:1730_45063888-A:fNM_000376, NM_001017535Homo sapiens vitamin D (1,25- dihydroxyvitamin D3) receptor (VDR), transcript variant 1, mRNAXM_882645PREDICTED: Bos taurus similar to Vitamin D3 receptor (VDR) (1,25-dihydroxyvitamin D3 receptor), transcript variant 4 (LOC533656), mRNA4e-33BF046549, CK833908 Bt.17725.1.A1_at (16236 bases away) Bt.17725.1.A1_at (16211 bases away)
11225:5745_CL1Contig1-B:rNM_024056Homo sapiens transmembrane protein 106C (TMEM106C), mRNANM_001034461Bos taurus hypothetical LOC514271 (MGC127063), mRNA4e-33DV814996, btcn4909 Bt.8848.1.S1_at (94 bases away) Bt.8848.1.S1_at
11226:45360_CL147Contig1-B:rNM_033150, NM_001844Homo sapiens collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital) (COL2A1), transcript variant 1, mRNAbtcn4916 Bt.21390.1.S1_at
11227:38075_61766682-A:fNM_014554Homo sapiens SUMO1/sentrin specific peptidase 1 (SENP1), mRNAXM_618285PREDICTED: Bos taurus similar to Sentrin-specific protease 1 (Sentrin/SUMO-specific protease SENP1) (LOC538091), mRNA1e-30btcn4922 Bt.27971.1.S1_at (59247 bases away)
11229:1182_CL3Contig2-B:rNM_000289Homo sapiens phosphofructokinase, muscle (PFKM), mRNAXM_869501PREDICTED: Bos taurus similar to 6-phosphofructokinase, muscle type (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M), transcript variant 2 (LOC506544), mRNA4e-33DV797507, btcn4905, DV794007, btcn4896, btcn4902, AV615615 Bt.2347.2.S1_at, Bt.2347.3.S1_a_at Bt.2347.3.S1_a_at, Bt.2347.1.S1_at Bt.2347.2.S1_at, Bt.2347.3.S1_a_at Bt.2347.2.S1_at, Bt.2347.3.S1_a_at, Bt.2347.1.S1_at Bt.2347.3.S1_a_at, Bt.2347.1.S1_at Bt.2347.3.S1_a_at
1122:25562_CL3Contig1-B:rNM_004855Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class B (PIGB), mRNAXM_868007PREDICTED: Bos taurus similar to phosphatidylinositol glycan, class B (LOC616044), partial mRNA4e-33btcn39154 Bt.24422.1.S1_at
11230:9673_CL1Contig2-B:fNM_024095Homo sapiens ankyrin repeat and SOCS box-containing 8 (ASB8), mRNAXM_869496PREDICTED: Bos taurus similar to ankyrin repeat and SOCS box-containing 8 (LOC617269), mRNA4e-33btcn4897, CB455216 Bt.15790.2.S1_at, Bt.15790.1.S1_at Bt.15790.2.S1_at (1896 bases away)
11231:21254_CL1Contig1-A:rXM_937099, NM_001013635PREDICTED: Homo sapiens similar to expressed sequence AI836003 (LOC387856), mRNAXM_869523PREDICTED: Bos taurus hypothetical protein LOC617289 (LOC617289), mRNA4e-33btcn4917 Bt.26363.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11232:5156_CL2Contig1-B:fNM_002289Homo sapiens lactalbumin, alpha- (LALBA), mRNANM_174378Bos taurus lactalbumin, alpha (LALBA), mRNA4e-33btcn34989 Bt.5396.1.S1_at
11233:45360_62800269-A:rNM_002289 (37863 bases away)Homo sapiens lactalbumin, alpha- (LALBA), mRNAXM_605003PREDICTED: Bos taurus similar to olfactory receptor 282 (LOC526630), mRNA4e-27btcn34988 (20488 bases away)
11237:20096_CL3Contig4-B:fNM_016594Homo sapiens FK506 binding protein 11, 19 kDa (FKBP11), mRNAXM_869510PREDICTED: Bos taurus similar to FK506 binding protein 11 precursor (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (19 kDa FK506-binding protein) (FKBP-19), transcript variant 2 (LOC506043), mRNA4e-33btcn53520, btcn53519, btcn53521, BC110165, btcn53517 Bt.6840.1.S1_a_at Bt.6840.1.S1_a_at Bt.6840.1.S1_a_at Bt.6840.1.S1_a_at Bt.6840.1.S1_a_at
11238:19069_CL2Contig1-B:fNM_033124Homo sapiens coiled-coil domain containing 65 (CCDC65), mRNANM_001038166Bos taurus similar to CG10510-PA (MGC133899), mRNA4e-33btcn53523 Bt.6840.1.S1_a_at (704 bases away)
11239:4065_CL1Contig1-B:rNM_014470Homo sapiens Rho family GTPase 1 (RND1), mRNAXM_585709PREDICTED: Bos taurus similar to Rho-related GTP-binding protein Rho6 (Rho family GTPase 1) (Rnd1) (LOC508869), mRNA4e-33btcn53522 Bt.3774.1.A1_at
1123:2601_CL1Contig1-A:fNM_020739 (7513 bases away)Homo sapiens cell cycle progression 1 (CCPG1), transcript variant 2, mRNAbtcn39167 Bt.16670.1.A1_at
11240:14206_CL1Contig2-B:rNM_004818Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (DDX23), mRNAXM_882733PREDICTED: Bos taurus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 2 (LOC537395), mRNA4e-33btcn53524 Bt.14027.1.S1_at
11241:776_CL2Contig1-B:fNM_000725Homo sapiens calcium channel, voltage-dependent, beta 3 subunit (CACNB3), mRNANM_174509Bos taurus calcium channel, voltage-dependent, beta 3 subunit (CACNB3), mRNA4e-33btcn53529 Bt.5478.1.S1_at
11242:2664_7051335-B:fNM_015270, NM_020983Homo sapiens adenylate cyclase 6 (ADCY6), transcript variant 1, mRNAXM_882790PREDICTED: Bos taurus similar to adenylate cyclase 6 isoform b, transcript variant 4 (LOC509936), mRNA4e-33CR852239, btcn53525 Bt.11069.2.S1_at (997 bases away) Bt.11069.2.S1_at, Bt.11069.1.S1_at
11243:2899_CL1Contig3-A:fNM_001240 (5517 bases away)Homo sapiens cyclin T1 (CCNT1), mRNAbtcn49871, btcn53507.1, btcn55892, DT836792, btcn77.1, btcn25573 Bt.18869.1.A1_at (15514 bases away) Bt.18869.1.A1_at (14959 bases away) Bt.18869.1.A1_at (15521 bases away) Bt.11069.1.S1_at (380 bases away) Bt.18869.1.A1_at (14949 bases away) Bt.18869.1.A1_at (15636 bases away)
11244:33304_CL1Contig1-B:fNM_017822Homo sapiens chromosome 12 open reading frame 41 (C12orf41), mRNANM_001024571Bos taurus similar to hypothetical protein (FLJ20436), mRNA4e-33btcn53512, btcn53510, btcn53514, BE845904 Bt.15714.1.S1_at, Bt.15714.2.S1_a_at Bt.15714.1.S1_at, Bt.15714.2.S1_a_at Bt.15714.1.S1_at, Bt.15714.2.S1_a_at Bt.15714.2.S1_a_at
11245:45360_3057086-B:fXM_495921, XM_936625PREDICTED: Homo sapiens mucin 19 (MUC19), mRNAXM_615336PREDICTED: Bos taurus submaxillary mucin 2 (BSM), partial mRNA4e-33btcn43500 Bt.141.2.S1_a_at
11246:5506_CL2Contig1-B:rNM_153026Homo sapiens prickle-like 1 (Drosophila) (PRICKLE1), mRNAbtcn5809 Bt.18126.2.S1_at, Bt.18126.1.A1_at, Bt.12688.1.A1_at
11247:45360_45473865-B:fNM_201438, NM_016488, NM_201439, NM_201515, NM_201440Homo sapiens periphilin 1 (PPHLN1), transcript variant 1, mRNAXM_869679PREDICTED: Bos taurus similar to periphilin 1 isoform 2, transcript variant 2 (LOC532695), mRNA1e-30btcn5808, btcn5806, btcn5807, CK836582 Bt.4722.1.S1_at (32140 bases away) Bt.4722.1.S1_at (16390 bases away) Bt.27337.1.S1_at Bt.4722.1.S1_at (30949 bases away)
11248:8537_CL1Contig1-A:fNM_016488 (56444 bases away)Homo sapiens periphilin 1 (PPHLN1), transcript variant 1, mRNANM_001025318Bos taurus MADP-1 protein (MADP-1), mRNA4e-33btcn5802, btcn5804, DT883905, btcn5803 Bt.4722.1.S1_at Bt.4722.1.S1_at Bt.4722.1.S1_at Bt.4722.1.S1_at
11249:14333_CL1Contig1-B:fNM_020525Homo sapiens interleukin 22 (IL22), mRNAXM_584453PREDICTED: Bos taurus similar to interleukin 22 (LOC507778), mRNA4e-33btcn30084 Bt.188.1.S1_at (99541 bases away)
1124:7615_7051346-A:fNM_130810, NM_001033559, NM_001033560Homo sapiens dyslexia susceptibility 1 candidate 1 (DYX1C1), transcript variant 1, mRNAXM_866419PREDICTED: Bos taurus similar to dyslexia susceptibility 1 candidate 1, transcript variant 2 (LOC527393), mRNA4e-33DT830174, btcn39168 Bt.17883.2.A1_at (10790 bases away) Bt.16670.1.A1_at (29154 bases away)
11250:15540_CL1Contig1-A:fNM_000619Homo sapiens interferon, gamma (IFNG), mRNANM_174086Bos taurus interferon, gamma or immune type (IFNG), mRNA4e-33btcn30083 Bt.188.1.S1_at
11251:37083_10870966-A:fNM_139136, NM_153748Homo sapiens potassium voltage-gated channel, Shaw-related subfamily, member 2 (KCNC2), transcript variant 1, mRNAbtcn19050 Bt.25348.1.A1_at (328035 bases away)
11252:8626_CL3Contig1-B:fNM_001012424, NM_005748Homo sapiens YY1 associated factor 2 (YAF2), transcript variant 1, mRNAXM_869728PREDICTED: Bos taurus similar to YY1-associated factor 2, transcript variant 2 (LOC536696), mRNA4e-33CN790593, btcn40172, btcn40170 Bt.20149.1.S1_at (935 bases away) Bt.20149.1.S1_at (1049 bases away) Bt.20149.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11253:6506_CL3Contig1-B:fXM_290597, XM_936720PREDICTED: Homo sapiens hypothetical protein LOC283464 (LOC283464), mRNAXM_869884PREDICTED: Bos taurus similar to CG9996-PA (LOC617596), mRNA4e-33btcn40178 Bt.29463.1.S1_at (5091 bases away)
11254:45900_CL5Contig2-B:rNM_006431Homo sapiens chaperonin containing TCP1, subunit 2 (beta) (CCT2), mRNANM_001034239Bos taurus similar to chaperonin containing TCP1, subunit 2 (MGC128852), mRNA4e-33btcn46499, btcn46501 Bt.12365.1.S1_at Bt.12365.1.S1_at
11255:3707_29225458-A:fNM_006654, NM_001042555Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNAXM_869786PREDICTED: Bos taurus similar to fibroblast growth factor receptor substrate 2, transcript variant 3 (LOC538624), mRNA4e-33CB439940 Bt.16219.1.A1_at
11257:18111_9753436-A:fNM_006654, NM_001042555Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNAXM_593602PREDICTED: Bos taurus similar to membrane-associated ring finger (C3HC4) 6 (LOC540371), mRNA2e-13btcn38847.1 Bt.16219.1.A1_at (70754 bases away)
1125:10165_CL2Contig1-B:rXM_605785PREDICTED: Bos taurus similar to Pygopus homolog 1 (LOC527394), mRNA4e-33
11260:23750_CL1Contig1-B:rXM_585883PREDICTED: Bos taurus similar to solute carrier family 35, member E2 (LOC509009), partial mRNA1e-30
11261:7457_49421400-A:rNM_020401Homo sapiens nucleoporin 107kDa (NUP107), mRNAXM_581000PREDICTED: Bos taurus similar to Nuclear pore complex protein Nup107 (Nucleoporin Nup107) (107 kDa nucleoporin) (LOC504823), partial mRNA1e-30btcn9187, DY066518, btcn9186 Bt.2178.1.S1_at Bt.2178.1.S1_at Bt.2178.1.S1_at
11262:4199_CL4Contig1-B:fNM_002837Homo sapiens protein tyrosine phosphatase, receptor type, B (PTPRB), mRNAXM_582025PREDICTED: Bos taurus similar to Receptor-type tyrosine-protein phosphatase beta precursor (Protein-tyrosine phosphatase beta) (R-PTP-beta) (LOC505696), partial mRNA4e-33btcn34474 Bt.18748.1.A1_at
11263:5156_CL3Contig2-A:fNM_000239Homo sapiens lysozyme (renal amyloidosis) (LYZ), mRNAXM_613966PREDICTED: Bos taurus similar to lysozyme precursor (LOC540980), mRNA5e-14DT856883, btcn2387, BG937629.1 Bt.209.3.S1_at (181 bases away) Bt.209.3.S1_at Bt.209.3.S1_at
11264:45360_CL455Contig1-A:fNM_006851Homo sapiens GLI pathogenesis-related 1 (glioma) (GLIPR1), mRNAbtcn46512, CK777614 Bt.24419.1.S1_at Bt.24419.1.S1_at
11265:11318_CL1Contig1-B:fNM_007043Homo sapiens KRR1, small subunit (SSU) processome component, homolog (yeast) (KRR1), mRNANM_001037819Bos taurus similar to HIV-1 Rev-binding protein 2 (Rev-interacting protein 1) (Rip-1) (MGC128669), mRNA4e-33btcn46511 Bt.24419.1.S1_at
11266:657_CL1Contig1-A:fNM_014505Homo sapiens potassium large conductance calcium-activated channel, subfamily M, beta member 4 (KCNMB4), mRNAbtcn23227, DN538670, btcn40066 Bt.19643.2.S1_at Bt.19643.2.S1_at Bt.19643.1.S1_at, Bt.19643.2.S1_at
11267:4199_CL4Contig2-A:r
11268:3343_CL1Contig1-B:rNM_175624, NM_175625, NM_001024647, NM_022456, NM_175623Homo sapiens RAB3A interacting protein (rabin3) (RAB3IP), transcript variant alpha 1, mRNAXM_612639PREDICTED: Bos taurus similar to RAB3A interacting protein isoform alpha 1 (LOC533284), partial mRNA4e-33DV839922, DV777939, btcn45595 Bt.14853.1.A1_at Bt.14853.1.A1_at (4 bases away) Bt.14853.1.A1_at
11269:985_47687908-A:fXM_939870, XM_928530PREDICTED: Homo sapiens similar to CG3328-PA (LOC645507), mRNAbtcn45596 Bt.14853.1.A1_at (95765 bases away)
1126:35836_CL1Contig1-B:fNM_173814Homo sapiens protogenin homolog (Gallus gallus) (PRTG), mRNAXM_613448PREDICTED: Bos taurus similar to DDM36 (LOC540856), mRNA4e-33btcn39175 Bt.16784.1.S1_at (77599 bases away)
11270:1533_CL2Contig1-B:fNM_002392Homo sapiens Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) (MDM2), transcript variant MDM2, mRNAXM_593640PREDICTED: Bos taurus similar to Ubiquitin-protein ligase E3 Mdm2 (p53-binding protein Mdm2) (Oncoprotein Mdm2) (Double minute 2 protein) (Hdm2) (LOC540378), partial mRNA4e-33btcn7980 Bt.17772.1.S1_at (626 bases away)
11272:2711_CL2Contig1-B:rNM_003583, NM_006482Homo sapiens dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (DYRK2), transcript variant 1, mRNAXM_592833PREDICTED: Bos taurus similar to dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (LOC514916), mRNA4e-33DT838749, btcn13997, btcn50353.116 Bt.13748.1.S1_at, Bt.17004.1.A1_at, Bt.24876.1.S1_at Bt.24876.1.S1_at Bt.13748.1.S1_at, Bt.17004.1.A1_at, Bt.24876.1.S1_at
11273:24071_CL2Contig1-A:rNM_014319Homo sapiens LEM domain containing 3 (LEMD3), mRNAXM_609134PREDICTED: Bos taurus similar to Inner nuclear membrane protein Man1 (LEM domain containing protein 3) (LOC530659), mRNA4e-33btcn11516 Bt.10965.1.S1_at (283852 bases away)
11274:23354_CL1Contig1-B:rXM_870174PREDICTED: Bos taurus similar to methionine sulfoxide reductase B3 isoform 1 (LOC617849), mRNA1e-24

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11275:25884_CL1Contig1-B:f
11276:29840_CL4Contig1-B:fXM_939302, XM_350880PREDICTED: Homo sapiens protein phosphatase 1H (PP2C domain containing) (PPM1H), mRNAbtcn38253 Bt.12220.1.S1_a_at (3971 bases away)
11277:19239_9752680-A:rXM_945231 (1551809 bases away)PREDICTED: Homo sapiens similar to High mobility group protein 1-like 10 (HMG-1L10), transcript variant 4 (LOC649214), mRNAXM_600657PREDICTED: Bos taurus similar to R3H domain protein KIAA1002 (LOC522377), mRNA4e-33btcn14111, btcn55571.1 Bt.742.1.S1_at (1551028 bases away) Bt.742.1.S1_at (1550860 bases away)
11278:9666_CL1Contig3-B:rNM_145064Homo sapiens SH3 and cysteine rich domain 3 (STAC3), mRNAXM_872007PREDICTED: Bos taurus similar to SH3 and cysteine rich domain 3, transcript variant 7 (LOC518234), mRNA4e-33btcn55592, DV798560, btcn55593, btcn55594 Bt.27816.3.S1_a_at, Bt.27816.1.S1_at, Bt.27816.2.S1_a_at, Bt.27816.2.S1_at Bt.27816.3.S1_a_at, Bt.27816.1.S1_at, Bt.27816.2.S1_a_at, Bt.27816.2.S1_at Bt.27816.3.S1_a_at, Bt.27816.1.S1_at, Bt.27816.2.S1_a_at, Bt.27816.2.S1_at Bt.27816.3.S1_a_at, Bt.27816.1.S1_at, Bt.27816.2.S1_a_at, Bt.27816.2.S1_at
11279:8399_CL2Contig1-B:rNM_020142Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 (NDUFA4L2), mRNAXM_864449PREDICTED: Bos taurus similar to NADH:ubiquinone oxidoreductase MLRQ subunit homolog (LOC613541), mRNA4e-33btcn55554 Bt.1746.1.S1_at, Bt.1746.2.S1_at
1127:15066_CL10Contig1-B:rNM_006154, NM_198400Homo sapiens neural precursor cell expressed, developmentally down-regulated 4 (NEDD4), transcript variant 1, mRNAXM_878587PREDICTED: Bos taurus similar to E3 ubiquitin-protein ligase Nedd-4, transcript variant 4 (LOC507781), mRNA4e-33btcn39160, btcn39161 Bt.19024.1.A1_at (12 bases away) Bt.14223.2.S1_at, Bt.19024.1.A1_at, Bt.14223.3.S1_at, Bt.14223.1.A1_at
11280:5445_CL1Contig2-B:rNM_005412Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNANM_001034282Bos taurus serine hydroxymethyltransferase 2 (mitochondrial) (SHMT2), mRNA4e-33btcn55556 Bt.7178.1.S1_at, Bt.1746.2.S1_at
11281:45360_CL63Contig1-B:rNM_002332Homo sapiens low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) (LRP1), mRNAXM_616109PREDICTED: Bos taurus similar to Low-density lipoprotein receptor-related protein 1 precursor (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91) (LOC535991), mRNA4e-33btcn55575 Bt.854.1.S1_at
11283:45360_CL1243Contig1-A:rNM_002332Homo sapiens low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) (LRP1), mRNAbtcn55575, btcn55574 Bt.854.1.S1_at Bt.3008.1.S1_at (7675 bases away)
11284:45360_16350997-A:rNM_002332Homo sapiens low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) (LRP1), mRNAXM_613571PREDICTED: Bos taurus similar to Low-density lipoprotein receptor-related protein 1 precursor (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91) (LOC533978), mRNA4e-33btcn55575 Bt.854.1.S1_at
11285:45360_CL196Contig1-B:fNM_002332Homo sapiens low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) (LRP1), mRNAXM_613453PREDICTED: Bos taurus similar to Low-density lipoprotein receptor-related protein 1 precursor (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91) (LOC533894), mRNA4e-33btcn55515 Bt.3008.1.S1_at
11286:1056_CL1Contig3-A:fXM_937874, XM_927334PREDICTED: Homo sapiens similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) (LOC644109), mRNANM_174379Bos taurus laminin receptor 1 (ribosomal protein SA, 67 kDA) (LAMR1), mRNA4e-18btcn55610 Bt.27088.1.A1_at
11287:5785_CL1Contig1-B:rNM_003153Homo sapiens signal transducer and activator of transcription 6, interleukin-4 induced (STAT6), mRNAXM_612421PREDICTED: Bos taurus signal transducer and activator of transcription 6, interleukin-4 induced (STAT6), mRNA4e-33btcn55577, CK943302 Bt.26554.1.S1_at, Bt.20292.1.S1_at, Bt.6148.1.S1_at Bt.6148.1.S1_at (731 bases away)
11288:3052_CL1Contig2-B:rNM_005967Homo sapiens NGFI-A binding protein 2 (EGR1 binding protein 2) (NAB2), mRNAXM_873102PREDICTED: Bos taurus similar to NGFI-A binding protein 2 (EGR-1 binding protein 2) (Melanoma-associated delayed early response protein) (MADER protein), transcript variant 2 (LOC504755), mRNA4e-33btcn55577, CN439366 Bt.26554.1.S1_at, Bt.20292.1.S1_at, Bt.6148.1.S1_at Bt.26554.1.S1_at, Bt.20292.1.S1_at
11289:6501_CL1Contig1-B:rNM_015257Homo sapiens KIAA0286 protein (KIAA0286), mRNAXM_613582PREDICTED: Bos taurus similar to Protein KIAA0286 (LOC533988), mRNA4e-33btcn55615 Bt.26554.1.S1_at (20794 bases away)
1128:25376_45057981-A:fNM_022841Homo sapiens regulatory factor X domain containing 2 (RFXDC2), mRNAXM_614338PREDICTED: Bos taurus similar to regulatory factor X, 5 isoform 1 (LOC541058), mRNA4e-33btcn39172, btcn39171 Bt.24684.1.A1_at (1092 bases away) Bt.24684.1.A1_at (342 bases away)
11290:12477_CL10Contig2-B:rNM_005379Homo sapiens myosin IA (MYO1A), mRNANM_174395Bos taurus myosin IA (MYO1A), mRNA4e-33btcn55528, btcn55529 Bt.438.1.S1_at Bt.438.1.S1_at
11291:1120_58764155-A:rNM_013251 (726 bases away)Homo sapiens tachykinin 3 (neuromedin K, neurokinin beta) (TAC3), transcript variant 2, mRNANM_181017Bos taurus tachykinin 3, neurokinin beta (TAC3), mRNA4e-33btcn55591 BtAffx.1.13.S1_at
11292:22114_45208462-A:rNM_014830Homo sapiens zinc finger and BTB domain containing 39 (ZBTB39), mRNAXM_587594PREDICTED: Bos taurus similar to Zinc finger and BTB domain containing protein 39 (LOC510453), mRNA4e-33btcn55598 BtAffx.1.13.S1_at (17852 bases away)
11293:503_CL1Contig1-A:rNM_007264Homo sapiens adrenomedullin receptor (ADMR), mRNAXM_586542PREDICTED: Bos taurus similar to Adrenomedullin receptor (AM-R) (LOC509554), mRNA6e-20btcn55595 BtAffx.1.13.S1_at (25968 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11298:7936_CL18Contig1-B:rNM_003708Homo sapiens retinol dehydrogenase 16 (all-trans) (RDH16), mRNAXM_873892PREDICTED: Bos taurus similar to microsomal NAD+-dependent retinol dehydrogenase 4, transcript variant 4 (LOC519940), mRNA4e-33btcn55545 Bt.20711.1.S1_at, Bt.23677.1.A1_at
11299:7936_CL23Contig1-B:fNM_003725Homo sapiens hydroxysteroid (17-beta) dehydrogenase 6 (HSD17B6), mRNANM_001035395Bos taurus similar to 3-hydroxysteroid epimerase (MGC127926), mRNA4e-33btcn55537, btcn55538 Bt.16385.1.A1_at Bt.16385.1.A1_at
11300:9066_CL1Contig1-A:rNM_005594 (4879 bases away)Homo sapiens nascent-polypeptide-associated complex alpha polypeptide (NACA), mRNAXM_582661PREDICTED: Bos taurus similar to DNA primase small subunit (DNA primase 49 kDa subunit) (p49) (LOC506240), mRNA4e-33AM028124, BM480944, btcn55549 Bt.25257.1.A1_at (2023 bases away) Bt.25257.1.A1_at (578 bases away) Bt.25257.1.A1_at (758 bases away)
11301:951_CL1Contig3-B:rNM_199290, XM_939282, NM_001979, XM_371715Homo sapiens epoxide hydrolase 2, cytoplasmic (EPHX2), mRNANM_001014916Bos taurus nascent-polypeptide-associated complex alpha polypeptide (NACA), mRNA4e-33btcn9654, DV790143, AV599179.1, DV778421, DV786478, btcn55504.1, btcn55501.1, btcn55498.1, DV788336, btcn9655 Bt.28948.1.A1_at (23404 bases away) Bt.28948.1.A1_at Bt.28948.1.A1_at (23516 bases away) Bt.28948.1.A1_at (23438 bases away) Bt.28948.1.A1_at Bt.28948.1.A1_at (23421 bases away) Bt.28948.1.A1_at (23407 bases away) Bt.28948.1.A1_at (23444 bases away) Bt.28948.1.A1_at (23421 bases away) Bt.28948.1.A1_at
11302:3227_CL2Contig1-B:fXM_936816, XM_939520, NM_006601, XM_496721, XM_208234Homo sapiens prostaglandin E synthase 3 (cytosolic) (PTGES3), mRNANM_001007806Bos taurus cytosolic prostaglandin E synthase (CPGES), mRNA4e-33DV784746, DV791816, DV798218, btcn55520, DT810014, DV792380 Bt.7247.1.S1_at (5373 bases away) Bt.7247.1.S1_at (481 bases away) Bt.7247.1.S1_at (320 bases away) Bt.7247.1.S1_at Bt.7247.1.S1_at (281 bases away) Bt.7247.1.S1_at (3150 bases away)
11303:4039_CL1Contig1-B:rNM_001686Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), nuclear gene encoding mitochondrial protein, mRNANM_175796Bos taurus ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), mRNA4e-33DV789114, DV783068, CB468417, DV791510, btcn55497, DV792231, DV791020 Bt.4431.1.S1_a_at Bt.4431.2.A1_at, Bt.4431.1.S1_a_at Bt.4431.2.A1_at, Bt.4431.1.S1_a_at Bt.4431.2.A1_at, Bt.4431.1.S1_a_at Bt.4431.2.A1_at, Bt.4431.1.S1_a_at Bt.4431.2.A1_at, Bt.4431.1.S1_a_at Bt.4431.2.A1_at, Bt.4431.1.S1_a_at
11304:42865_CL1Contig2-B:rNM_013449Homo sapiens bromodomain adjacent to zinc finger domain, 2A (BAZ2A), mRNAXM_876015PREDICTED: Bos taurus similar to Bromodomain adjacent to zinc finger domain 2A (Transcription termination factor-I interacting protein 5) (TTF-I interacting protein 5) (Tip5) (hWALp3), transcript variant 4 (LOC509799), mRNA4e-33btcn55551 Bt.20812.1.A1_at
11305:4537_CL2Contig3-B:fNM_002898Homo sapiens RNA binding motif, single stranded interacting protein 2 (RBMS2), mRNANM_001034365Bos taurus RNA binding motif, single stranded interacting protein 2 (RBMS2), mRNA4e-33btcn55559, btcn55562 Bt.24935.1.S1_a_at, Bt.24935.3.S1_a_at Bt.24935.1.S1_a_at, Bt.24935.3.S1_a_at, Bt.24935.2.S1_at
11306:18432_CL5Contig1-B:fNM_012064Homo sapiens major intrinsic protein of lens fiber (MIP), mRNANM_173937Bos taurus major intrinsic protein of lens fiber (MIP), mRNA4e-33btcn55618 Bt.4516.1.S1_at
11307:4995_CL1Contig1-B:rNM_003920Homo sapiens timeless homolog (Drosophila) (TIMELESS), mRNAXM_601172PREDICTED: Bos taurus similar to timeless homolog (LOC522884), mRNA4e-33btcn55588, btcn55588.1 Bt.22067.1.S1_at Bt.22067.1.S1_at
11308:22931_CL1Contig1-A:fNM_003920 (15762 bases away)Homo sapiens timeless homolog (Drosophila) (TIMELESS), mRNANM_001003907Bos taurus ovarian and testicular apolipoprotein N (ApoN), mRNA4e-33btcn55543, DV807853 Bt.19980.2.S1_at, Bt.19980.1.A1_at Bt.19980.2.S1_at, Bt.19980.1.A1_at
11309:20912_CL1Contig1-A:rNM_005419 (3493 bases away)Homo sapiens signal transducer and activator of transcription 2, 113kDa (STAT2), mRNAbtcn55542 Bt.19980.1.A1_at (12676 bases away)
1130:1327_7420624-A:fXM_941380, XM_930037PREDICTED: Homo sapiens unc-13 homolog C (C. elegans), transcript variant 2 (UNC13C), mRNAXM_603976PREDICTED: Bos taurus similar to Unc-13 homolog C (Munc13-3) (LOC525623), mRNA4e-33AW654798 Bt.5021.1.S1_at (769735 bases away)
11310:15518_CL5Contig1-A:fNM_005419Homo sapiens signal transducer and activator of transcription 2, 113kDa (STAT2), mRNAXM_588270PREDICTED: Bos taurus similar to Signal transducer and activator of transcription 2 (p113) (LOC511023), mRNA4e-33btcn55532 Bt.27943.1.S1_at, Bt.24492.1.S1_at
11311:22135_CL1Contig2-A:rNM_004077, NM_198324Homo sapiens citrate synthase (CS), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_877235PREDICTED: Bos taurus citrate synthase, transcript variant 3 (CS), mRNA4e-33btcn55508, btcn55505 Bt.1129.1.S1_at Bt.1129.2.S1_at, Bt.1129.1.S1_at, Bt.17441.1.A1_at
11312:6356_CL3Contig1-B:rNM_173596Homo sapiens solute carrier family 39 (metal ion transporter), member 5 (SLC39A5), mRNANM_001035102Bos taurus solute carrier family 39 (metal ion transporter), member 5 (SLC39A5), mRNA4e-33btcn55563, btcn55564 Bt.24573.1.A1_at, Bt.8560.1.S1_at Bt.12435.2.S1_at (176 bases away)
11313:1017_CL2Contig2-B:fNM_024068Homo sapiens oligonucleotide/oligosaccharide-binding fold containing 2B (OBFC2B), mRNAXM_613378PREDICTED: Bos taurus similar to CG5181-PA, transcript variant 1 (LOC533842), mRNA4e-33DV886890, CN789689, btcn55523, btcn55524 Bt.12435.1.S1_at Bt.12435.1.S1_at Bt.12435.2.S1_at, Bt.12435.1.S1_at Bt.12435.1.S1_at
11314:10902_CL1Contig1-B:fNM_194359, NM_005785, NM_194358Homo sapiens ring finger protein 41 (RNF41), transcript variant 1, mRNAXM_865504PREDICTED: Bos taurus similar to ring finger protein 41 (LOC614134), mRNA4e-33btcn55587, btcn55586 Bt.4930.1.S1_at (1663 bases away) Bt.4930.1.S1_at
11315:7160_CL5Contig1-B:fNM_139067, NM_003075Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 (SMARCC2), transcript variant 1, mRNAXM_585948PREDICTED: Bos taurus similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin c2 isoform a (LOC509060), mRNA4e-33btcn55584 Bt.10485.1.S1_at (5952 bases away)
11317:7160_CL2Contig1-A:fNM_139067, NM_003075Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 (SMARCC2), transcript variant 1, mRNAbtcn55487 Bt.10485.1.S1_at (1217 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11318:12477_CL3Contig9-B:rXM_940535, XM_064265, NM_021019, NM_079423Homo sapiens myosin, light polypeptide 6, alkali, smooth muscle and non-muscle (MYL6), transcript variant 1, mRNANM_175780Bos taurus myosin, light peptide 6, alkali, smooth muscle and non-muscle (MYL6), mRNA4e-33btcn55484, btcn55491, btcn55486, DN286121, CB461693, btcn55489, AW463828, DV876012, btcn55492, DV778639, btcn55493, btcn55485 Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at Bt.2847.1.S1_a_at
11319:12477_CL3Contig4-B:rNM_002475Homo sapiens myosin, light polypeptide 6B, alkali, smooth muscle and non-muscle (MYL6B), mRNAXM_593442PREDICTED: Bos taurus similar to Myosin light chain 1, slow-twitch muscle A isoform (MLC1sa) (Alkali) (LOC515421), mRNA4e-33DV795182, DV794259, DV794687, CR851113, DV794553, btcn55573, DV798421 Bt.2847.1.S1_a_at (2648 bases away) Bt.2847.1.S1_a_at (1567 bases away) Bt.2847.1.S1_a_at (1565 bases away) Bt.2847.1.S1_a_at (2122 bases away) Bt.2847.1.S1_a_at (1564 bases away) Bt.2847.1.S1_a_at (1564 bases away) Bt.2847.1.S1_a_at (1565 bases away)
1131:4783_CL1Contig2-B:fNM_000126Homo sapiens electron-transfer-flavoprotein, alpha polypeptide (glutaric aciduria II) (ETFA), nuclear gene encoding mitochondrial protein, mRNAXM_600164PREDICTED: Bos taurus similar to Electron transfer flavoprotein alpha-subunit, mitochondrial precursor (Alpha-ETF) (LOC521892), mRNA4e-33DV792852, btcn42011, DV787176, DV778768, DV775803, DT810002, DV778481, btcn28480, DV785534 Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at Bt.5350.1.S1_at
11320:30555_CL1Contig1-B:fNM_015292Homo sapiens family with sequence similarity 62 (C2 domain containing), member A (FAM62A), mRNAXM_598917PREDICTED: Bos taurus similar to family with sequence similarity 62 (C2 domain containing), member A (LOC520669), mRNA4e-33btcn55546, DV797558 Bt.1384.1.S1_at Bt.1384.1.S1_at
11321:981_CL2Contig1-A:rNM_032786Homo sapiens zinc finger CCCH-type containing 10 (ZC3H10), mRNAXM_584071PREDICTED: Bos taurus hypothetical LOC507466 (LOC507466), mRNA2e-19btcn55512, btcn55513 Bt.26585.1.A1_at Bt.26585.1.A1_at, Bt.26585.3.S1_at, Bt.26585.2.S1_at
11322:6216_CL1Contig2-B:rNM_001034699Bos taurus similar to proliferation-associated 2G4, 38kDa (MGC128827), mRNA4e-33
11323:34974_CL13Contig2-A:r
11324:9365_CL1Contig4-A:fXM_945601 (1296 bases away)PREDICTED: Homo sapiens similar to 40S ribosomal protein S26, transcript variant 2 (LOC649899), mRNABM255420 Bt.2934.1.S1_at (2218 bases away)
11325:7501_CL2Contig1-A:fNM_022465Homo sapiens IKAROS family zinc finger 4 (Eos) (IKZF4), mRNAbtcn55608 Bt.20633.1.S1_at (245 bases away)
11326:10901_CL1Contig1-A:rNM_001032387, NM_001032386, NM_000456Homo sapiens sulfite oxidase (SUOX), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNANM_001034366Bos taurus similar to Sulfite oxidase, mitochondrial precursor (MGC129011), mRNA4e-33DY186372, btcn55553 Bt.2457.1.S1_at Bt.2457.1.S1_at
11327:8747_CL5Contig1-B:rNM_002868Homo sapiens RAB5B, member RAS oncogene family (RAB5B), mRNAXM_585238PREDICTED: Bos taurus similar to RAB5B, member RAS oncogene family, transcript variant 1 (LOC539150), mRNA4e-33btcn55516, btcn55517 Bt.21387.1.S1_at, Bt.20843.1.S1_at Bt.20843.1.S1_at
11328:10595_CL1Contig3-B:fNM_001798, NM_052827Homo sapiens cyclin-dependent kinase 2 (CDK2), transcript variant 1, mRNANM_001014934Bos taurus cyclin-dependent kinase 2 (CDK2), mRNA4e-33DV805462, btcn55590, DN539946 Bt.21444.1.S1_at Bt.21444.1.S1_at, Bt.26516.1.S1_at Bt.21444.1.S1_at
11329:13346_CL2Contig1-B:fNM_006928Homo sapiens silver homolog (mouse) (SILV), mRNAXM_582778PREDICTED: Bos taurus silver (mouse homolog) like (SILV), mRNA4e-33btcn55578 Bt.5091.1.S1_at, Bt.8070.1.S1_at
1132:8526_29184648-A:fNM_145805Homo sapiens ISL2 transcription factor, LIM/homeodomain, (islet-2) (ISL2), mRNAbtcn28483 Bt.18882.1.A1_at (4910 bases away)
11330:4027_CL2Contig1-A:fNM_007350Homo sapiens pleckstrin homology-like domain, family A, member 1 (PHLDA1), mRNAXM_591758PREDICTED: Bos taurus similar to pleckstrin homology-like domain, family A, member 1 (LOC540135), mRNA4e-33btcn27261 Bt.10212.1.S1_at
11331:2100_CL1Contig4-A:rNM_002509 (33595 bases away)Homo sapiens NK2 transcription factor related, locus 2 (Drosophila) (NKX2-2), mRNAXM_873206PREDICTED: Bos taurus similar to Nucleosome assembly protein 1-like 1 (NAP-1 related protein) (hNRP), transcript variant 13 (LOC540136), mRNA4e-24btcn27257.1, AM009593.1, DV808996.1, btcn7188.1, btcn27259.1, btcn27256.1, btcn55071.1, btcn27258.1 Bt.18285.1.A1_at (35869 bases away) Bt.18285.1.A1_at (35550 bases away) Bt.18285.1.A1_at (35284 bases away) Bt.18285.1.A1_at (35340 bases away) Bt.18285.1.A1_at (36183 bases away) Bt.18285.1.A1_at (35976 bases away) Bt.18285.1.A1_at (35284 bases away) Bt.18285.1.A1_at (35283 bases away)
11332:983_CL1Contig2-A:fNM_001497Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4GALT1), mRNADY159232, btcn9671, btcn47713, btcn9670 Bt.5141.1.S1_at Bt.5141.1.S1_at, Bt.5141.1.S2_at Bt.5141.1.S1_at Bt.5141.1.S1_at
11333:10271_CL1Contig1-B:fNM_018225Homo sapiens smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (SMU1), mRNANM_001038573Bos taurus smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (SMU1), mRNA4e-33btcn9669 Bt.25206.1.S1_at, Bt.25206.1.S1_a_at, Bt.4500.1.S1_at
11334:7676_CL1Contig2-B:rNM_001539Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1), mRNANM_001015637Bos taurus DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1), mRNA4e-33btcn7119, btcn9667, CX950335, DV912982, btcn9666 Bt.3274.1.A2_at Bt.3274.1.A2_at Bt.3274.1.A2_at (274 bases away) Bt.3274.1.A2_at (147 bases away) Bt.3274.1.A2_at (172 bases away)
11335:13734_CL1Contig1-B:fNM_175069, NM_017692, NM_175072, NM_175071, NM_175073Homo sapiens aprataxin (APTX), transcript variant 4, mRNANM_182654Bos taurus aprataxin (APTX), mRNA4e-33btcn9661, btcn9660 Bt.16472.1.S1_at Bt.16472.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11336:7006_51813268-A:fNM_175069 (39900 bases away)Homo sapiens aprataxin (APTX), transcript variant 2, mRNAXM_591020PREDICTED: Bos taurus similar to Clusterin precursor (Complement-associated protein SP-40,40) (Complement cytolysis inhibitor) (CLI) (NA1/NA2) (Apolipoprotein J) (Apo-J) (Testosterone-repressed prostate message 2) (TRPM-2) (LOC513351), mRNA4e-33btcn9672 Bt.13113.1.S1_at (13870 bases away)
11337:13079_CL1Contig3-A:rNM_001979 (26746 bases away)Homo sapiens epoxide hydrolase 2, cytoplasmic (EPHX2), mRNANM_001034043Bos taurus L-gulono-gamma-lactone oxidase (GULO), mRNA1e-30btcn9659, DV789420, btcn9657, btcn9658 Bt.13113.1.S1_at Bt.13113.1.S1_at Bt.13113.1.S1_at Bt.13113.1.S1_at
11338:18650_CL1Contig1-B:fNM_001979Homo sapiens epoxide hydrolase 2, cytoplasmic (EPHX2), mRNAXM_879721PREDICTED: Bos taurus similar to epoxide hydrolase 2, cytoplasmic, transcript variant 4 (LOC511716), mRNA4e-33btcn9655, DN519355 Bt.28948.1.A1_at Bt.13113.1.S1_at (27411 bases away)
11339:34974_CL53Contig1-B:fNM_173176, NM_004103, NM_173175, NM_173174Homo sapiens PTK2B protein tyrosine kinase 2 beta (PTK2B), transcript variant 2, mRNAXM_614070PREDICTED: Bos taurus similar to PTK2B protein tyrosine kinase 2 beta isoform a (LOC541008), mRNA4e-33btcn9673 Bt.13853.2.S1_a_at (28285 bases away)
1133:25094_CL1Contig1-B:rNM_020843Homo sapiens zinc finger protein 291 (ZNF291), mRNAXM_868537PREDICTED: Bos taurus similar to zinc finger protein 291 (LOC616504), partial mRNA4e-33btcn28481 Bt.26771.1.S1_at, Bt.19685.1.A1_at
11340:7445_CL1Contig2-B:fNM_001017957, NM_001017958, NM_006812, NM_001017956Homo sapiens amplified in osteosarcoma (OS9), transcript variant 1, mRNANM_001034225Bos taurus amplified in osteosarcoma (OS9), mRNA4e-33btcn24182, btcn24183, CR553712, btcn24180, btcn24179 Bt.4548.1.S1_at Bt.4548.1.S1_at Bt.4548.1.S1_at Bt.4548.1.S1_at Bt.4548.1.S1_at
11341:13611_CL1Contig2-B:fNM_005981Homo sapiens tetraspanin 31 (TSPAN31), mRNANM_001037595Bos taurus tetraspanin 31 (TSPAN31), mRNA4e-33btcn24175, AW463324, btcn24174, btcn24177 Bt.1801.3.S1_at, Bt.1801.2.S1_a_at Bt.1801.2.S1_a_at (519 bases away) Bt.1801.3.S1_at, Bt.1801.2.S1_a_at Bt.1801.2.S1_a_at
11342:4767_CL1Contig1-B:fNM_000075Homo sapiens cyclin-dependent kinase 4 (CDK4), mRNANM_001037594Bos taurus cyclin-dependent kinase 4 (CDK4), mRNA4e-33btcn24170 Bt.4661.1.S1_at
11343:26536_CL1Contig1-B:fNM_138396Homo sapiens membrane-associated ring finger (C3HC4) 9 (MARCH9), mRNAXM_613534PREDICTED: Bos taurus similar to membrane-associated RING-CH protein IX, transcript variant 1 (LOC540871), mRNA4e-33btcn24194 Bt.18862.1.S1_at, Bt.18862.2.S1_at, Bt.5646.1.S1_at
11344:1499_60724616-A:fNM_000785Homo sapiens cytochrome P450, family 27, subfamily B, polypeptide 1 (CYP27B1), nuclear gene encoding mitochondrial protein, mRNAXM_588481PREDICTED: Bos taurus similar to 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial precursor (Calcidiol 1-monooxygenase) (25-OHD-1 alpha-hydroxylase) (25-hydroxyvitamin D(3) 1-alpha-hydroxylase) (VD3 1A hydroxylase) (P450C1 alpha) (P450VD1-alpha) (LOC539630), mRNA4e-33btcn24195 Bt.18862.1.S1_at (1998 bases away)
11345:18374_13933738-B:fNM_005371, NM_023033Homo sapiens methyltransferase like 1 (METTL1), transcript variant 1, mRNAXM_879945PREDICTED: Bos taurus similar to methyltransferase-like protein 1 isoform a, transcript variant 4 (LOC511197), mRNA2e-25btcn24184, AV614490, BG691918, btcn24185 Bt.5722.2.S1_a_at Bt.5722.2.S1_a_at Bt.5722.2.S1_a_at Bt.5722.2.S1_a_at
11346:2037_CL1Contig1-B:fNM_206914, NM_015433Homo sapiens family with sequence similarity 119, member B (FAM119B), transcript variant 1, mRNAXM_588479PREDICTED: Bos taurus similar to C42C1.13 (LOC511196), mRNA4e-33btcn24191 Bt.7067.1.A1_at, Bt.532.1.S1_at
11347:14459_CL1Contig2-B:fNM_005726Homo sapiens Ts translation elongation factor, mitochondrial (TSFM), mRNANM_174204Bos taurus Ts translation elongation factor, mitochondrial (TSFM), mRNA4e-33btcn24192, btcn24189, btcn24191, DV919540 Bt.532.1.S1_at Bt.532.1.S1_at Bt.7067.1.A1_at, Bt.532.1.S1_at Bt.7067.1.A1_at (411 bases away)
11348:3109_CL6Contig1-B:fNM_006576 (180 bases away)Homo sapiens advillin (AVIL), mRNAXM_599021PREDICTED: Bos taurus similar to advillin (LOC520771), mRNA4e-33btcn24196 Bt.532.1.S1_at (1081 bases away)
11349:13207_CL4Contig2-B:rNM_005730Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 (CTDSP2), mRNAXM_880092PREDICTED: Bos taurus similar to nuclear LIM interactor-interacting factor 2, transcript variant 3 (LOC506115), mRNA4e-33btcn24168, btcn24167, DY125373 Bt.12358.1.S1_at, Bt.2131.1.S1_at, Bt.8606.1.S1_a_at Bt.2131.1.S1_at (514 bases away) Bt.2131.1.S1_at (259 bases away)
1134:26868_9603006-A:fNM_022662, XM_927921Homo sapiens anaphase promoting complex subunit 1 (ANAPC1), mRNAXM_598937PREDICTED: Bos taurus similar to anaphase promoting complex subunit 1 (LOC520689), partial mRNA4e-33BE483473 Bt.7138.1.S1_at (79108 bases away)
11350:2281_10123374-B:fNM_033276Homo sapiens XRCC6 binding protein 1 (XRCC6BP1), mRNAXM_591797PREDICTED: Bos taurus similar to Ku70-binding protein 3 (LOC514014), mRNA2e-29DV778705, btcn24186, btcn24187, DV780238, btcn24188 Bt.2131.1.S1_at (115914 bases away) Bt.2131.1.S1_at (115844 bases away) Bt.2131.1.S1_at (115863 bases away) Bt.2131.1.S1_at (116099 bases away) Bt.2131.1.S1_at (115796 bases away)
11351:4165_CL1Contig1-B:rNM_004984Homo sapiens kinesin family member 5A (KIF5A), mRNAXM_588573PREDICTED: Bos taurus similar to kinesin family member 5A, transcript variant 1 (LOC511273), mRNA4e-33btcn53739, btcn53738 Bt.16534.1.A1_at (24340 bases away) Bt.4172.2.S1_a_at (28368 bases away)
11352:25707_CL1Contig1-B:rNM_006400Homo sapiens dynactin 2 (p50) (DCTN2), mRNANM_001034558Bos taurus similar to dynactin 2 (MGC127636), mRNA4e-33DV890511, btcn53743 Bt.1930.1.S1_at Bt.1930.1.S1_at, Bt.16534.1.A1_at
11353:19967_CL1Contig1-A:rNM_052897Homo sapiens methyl-CpG binding domain protein 6 (MBD6), mRNAbtcn53759, btcn53760 Bt.5923.1.S1_a_at, Bt.5923.2.S1_at Bt.5923.2.S1_at (341 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11355:19967_29217353-A:rNM_052897Homo sapiens methyl-CpG binding domain protein 6 (MBD6), mRNACB435880 Bt.5923.2.S1_at (3518 bases away)
11356:32210_CL1Contig2-B:fNM_004990Homo sapiens methionine-tRNA synthetase (MARS), mRNANM_001038091Bos taurus similar to methionine-tRNA synthetase (MGC134096), mRNA1e-30btcn53753, btcn53751 Bt.9306.3.S1_at (4979 bases away) Bt.9306.2.S1_a_at, Bt.9306.3.S1_at
11357:1491_CL1Contig1-B:rNM_032496Homo sapiens Rho GTPase activating protein 9 (ARHGAP9), mRNAXM_867633PREDICTED: Bos taurus similar to Rho-GTPase-activating protein 9, transcript variant 2 (LOC507960), mRNA4e-33btcn53747, btcn53746 Bt.9442.2.S1_a_at Bt.9442.2.S1_a_at
11358:42664_CL2Contig1-A:fNM_031479Homo sapiens inhibin, beta E (INHBE), mRNAXM_595759PREDICTED: Bos taurus similar to activin beta E (LOC517587), mRNA4e-33btcn53761 Bt.26039.1.A1_at (10521 bases away)
1135:1787_CL2Contig1-B:fNM_006343 (7421 bases away)Homo sapiens c-mer proto-oncogene tyrosine kinase (MERTK), mRNAXM_580552PREDICTED: Bos taurus similar to MER receptor tyrosine kinase precursor (LOC504429), mRNA4e-33btcn7672 Bt.22026.1.S1_at
11360:19239_CL2Contig1-A:rNM_014925Homo sapiens R3H domain containing 2 (R3HDM2), mRNAXM_585316PREDICTED: Bos taurus similar to R3H domain protein KIAA1002 (LOC508528), partial mRNA4e-33btcn53762 Bt.15805.1.S1_at (13260 bases away)
11361:18876_CL1Contig1-B:rXM_942033, NM_002429, NM_001032360Homo sapiens matrix metallopeptidase 19 (MMP19), transcript variant 1, mRNAXM_880636PREDICTED: Bos taurus similar to matrix metalloproteinase 19 isoform rasi-6, transcript variant 3 (LOC533203), mRNA4e-33btcn45694 Bt.3681.1.S1_at
11362:3962_15633977-B:fXM_943843 (768 bases away)PREDICTED: Homo sapiens hypothetical protein LOC649680 (LOC649680), mRNAXM_584220PREDICTED: Bos taurus hypothetical LOC507581 (LOC507581), mRNA4e-33btcn45690, btcn45691, DV879169, btcn45692 Bt.4743.2.S1_at Bt.4743.2.S1_at, Bt.4743.1.A1_at Bt.4743.2.S1_at Bt.4743.2.S1_at
11363:2542_CL2Contig2-B:fNM_032364Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 14 (DNAJC14), mRNANM_174274Bos taurus DnaJ (Hsp40) homolog, subfamily C, member 14 (DNAJC14), mRNA4e-33AF308815, btcn45686 Bt.7218.1.S2_a_at, Bt.7218.1.S1_a_at Bt.7218.1.S2_a_at, Bt.7218.1.S1_a_at
11364:6211_CL1Contig2-B:rNM_014182Homo sapiens ORM1-like 2 (S. cerevisiae) (ORMDL2), mRNANM_001014931Bos taurus ORM1-like 1 (ORMDL1), mRNA4e-33btcn45689 Bt.4986.1.S1_at
11365:2542_CL1Contig1-B:fNM_033082Homo sapiens cytokine induced protein 29 kDa (CIP29), mRNANM_001042654Bos taurus cytokine induced protein 29 kDa (CIP29), mRNA4e-33btcn45684, btcn2671, btcn45685 Bt.3079.1.S1_at Bt.3079.1.S1_at Bt.3079.1.S1_at
11367:16943_CL2Contig1-B:fXM_583479PREDICTED: Bos taurus hypothetical LOC506952 (LOC506952), mRNA4e-33
11368:11827_CL1Contig3-B:rNM_001487Homo sapiens biogenesis of lysosome-related organelles complex-1, subunit 1 (BLOC1S1), mRNAXM_866881PREDICTED: Bos taurus similar to Biogenesis of lysosome-related organelles complex-1, subunit 1 (BLOC-1 subunit 1) (GCN5-like protein 1) (RT14 protein) (LOC615149), mRNA4e-33btcn2677, btcn2679, btcn2678 Bt.2824.1.S1_at Bt.2824.1.S1_at Bt.2824.1.S1_at
11369:7936_CL24Contig1-B:rNM_002905Homo sapiens retinol dehydrogenase 5 (11-cis/9-cis) (RDH5), mRNANM_174166Bos taurus retinol dehydrogenase 5 (11-cis and 9-cis) (RDH5), mRNA4e-33btcn2680 Bt.4598.1.S1_a_at
1136:7537_10760851-A:rNM_153214Homo sapiens hypothetical protein FLJ37440 (FLJ37440), mRNAXM_870333PREDICTED: Bos taurus similar to T07H6.5 (LOC618001), mRNA1e-30BF043796 Bt.6810.1.A1_at (9848 bases away)
11370:3989_CL1Contig3-B:rNM_001780, NM_001040034Homo sapiens CD63 molecule (CD63), transcript variant 1, mRNANM_205803Bos taurus CD63 protein (CD63), mRNA4e-33btcn2669, DV793451, btcn2670, btcn2668, btcn2667 Bt.13496.2.S1_a_at Bt.13496.2.S1_a_at Bt.13496.2.S1_a_at Bt.13496.2.S1_a_at Bt.13496.2.S1_a_at
11371:5681_CL1Contig1-A:fNM_032345Homo sapiens within bgcn homolog (Drosophila) (WIBG), mRNAXM_601685PREDICTED: Bos taurus similar to within bgcn homolog (LOC523388), partial mRNA4e-33btcn40302 Bt.26517.1.S1_at
11372:10518_CL1Contig1-B:rNM_000895Homo sapiens leukotriene A4 hydrolase (LTA4H), mRNANM_001034280Bos taurus leukotriene A4 hydrolase (LTA4H), mRNA4e-33CB221587, CK965341, btcn54396 Bt.6143.1.S1_at Bt.6143.1.S1_at Bt.6143.1.S1_at
11373:24997_CL1Contig1-B:rNM_152435Homo sapiens amidohydrolase domain containing 1 (AMDHD1), mRNAXM_581586PREDICTED: Bos taurus similar to T12A2.1 (LOC505315), mRNA4e-33btcn54402, BE482855 Bt.23671.1.S1_at Bt.23671.1.S1_at (649 bases away)
11376:13020_CL1Contig1-A:fNM_182496Homo sapiens coiled-coil domain containing 38 (CCDC38), mRNAbtcn54399 Bt.24628.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11377:5753_CL1Contig1-B:rNM_003095Homo sapiens small nuclear ribonucleoprotein polypeptide F (SNRPF), mRNAXM_866997PREDICTED: Bos taurus similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) (LOC615240), mRNA4e-33DY146359, DY044586, btcn54399 Bt.24628.1.S1_at Bt.24628.1.S1_at Bt.24628.1.S1_at
11378:9456_CL4Contig1-B:fNM_021229Homo sapiens netrin 4 (NTN4), mRNAXM_617620PREDICTED: Bos taurus similar to netrin 4 (LOC537455), mRNA4e-33btcn54398, DV776173, DV781627 Bt.26919.1.S1_at Bt.26919.1.S1_at (139 bases away) Bt.26919.1.S1_at (267 bases away)
11379:6303_CL3Contig1-B:fNM_002595Homo sapiens PCTAIRE protein kinase 2 (PCTK2), mRNAXM_588580PREDICTED: Bos taurus similar to PCTAIRE protein kinase 2 (LOC539655), partial mRNA4e-33btcn13500, btcn13501 Bt.23576.1.A1_at (1050 bases away) Bt.23576.1.A1_at
11382:25577_CL5Contig1-B:fNM_005230Homo sapiens ELK3, ETS-domain protein (SRF accessory protein 2) (ELK3), mRNAXM_880957PREDICTED: Bos taurus similar to ELK3 protein, transcript variant 3 (LOC541125), mRNA4e-33btcn13503 Bt.5788.1.S1_at (1251 bases away)
11383:29158_CL1Contig1-B:fNM_152905 (318 bases away)Homo sapiens neural precursor cell expressed, developmentally down-regulated 1 (NEDD1), mRNANM_001035333Bos taurus neural precursor cell expressed, developmentally down-regulated 1 (NEDD1), mRNA4e-33btcn37327 Bt.18215.1.A1_at
11384:8135_CL3Contig1-B:fNM_017915Homo sapiens chromosome 12 open reading frame 48 (C12orf48), mRNAXM_867341PREDICTED: Bos taurus hypothetical protein LOC615510 (LOC615510), partial mRNA4e-33btcn51078 Bt.1190.2.S1_at (202 bases away)
11385:6608_CL2Contig1-B:rNM_000618Homo sapiens insulin-like growth factor 1 (somatomedin C) (IGF1), mRNAXM_881049PREDICTED: Bos taurus insulin like growth factor 1, transcript variant 4 (IGF1), mRNA4e-33btcn51073 Bt.12750.1.S1_at, Bt.12750.2.S1_x_at, Bt.12750.2.A1_at, Bt.12750.2.S1_a_at
11386:34624_CL1Contig1-A:fNM_001032283, NM_001032284, NM_003276Homo sapiens thymopoietin (TMPO), transcript variant 1, mRNAXM_867965PREDICTED: Bos taurus similar to thymopoietin isoform gamma, transcript variant 3 (LOC510267), mRNA4e-33btcn29777, btcn29778 Bt.9101.1.S1_at Bt.9101.1.S1_at
11387:2135_CL1Contig2-B:rNM_002635, NM_005888, NM_213611Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNANM_174657Bos taurus solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), mRNA4e-33DV797928, DV782999, DV782978, CK967431, btcn29769, DV793570, btcn29768, DV788645, DV798968, btcn29767 Bt.4880.1.S1_at Bt.4880.1.S1_at Bt.4880.1.S1_at Bt.4880.1.S1_at (620 bases away) Bt.4880.1.S1_at Bt.4880.1.S1_at Bt.4880.1.S1_at, Bt.12560.1.S1_at Bt.4880.1.S1_at Bt.4880.1.S1_at Bt.4880.1.S1_at
11389:11983_CL1Contig1-A:rNM_201612, NM_201613Homo sapiens IKK interacting protein (IKIP), transcript variant 2, mRNAXM_612419PREDICTED: Bos taurus similar to IKK interacting protein isoform 2, transcript variant 1 (LOC540640), mRNA4e-33btcn29766 Bt.21447.1.A1_at, Bt.14368.1.A1_at, Bt.14368.2.S1_at
1138:2014_CL1Contig1-B:rNM_006839Homo sapiens inner membrane protein, mitochondrial (mitofilin) (IMMT), mRNAXM_585689PREDICTED: Bos taurus similar to inner membrane protein, mitochondrial (LOC508853), partial mRNA4e-33CB538684, btcn36846, btcn36847 Bt.3605.1.S1_at Bt.3605.1.S1_at Bt.3605.1.S1_at
11390:21012_CL1Contig1-B:rNM_013229, NM_181869, NM_181868, NM_001160, NM_181861Homo sapiens apoptotic peptidase activating factor (APAF1), transcript variant 2, mRNAXM_881260PREDICTED: Bos taurus similar to Apoptotic protease activating factor 1 (Apaf-1), transcript variant 5 (LOC537782), mRNA4e-33btcn29783 Bt.27298.1.A1_at (184 bases away)
11391:45728_4887791-A:rNM_013229, NM_181869, NM_181868, NM_001160, NM_181861Homo sapiens apoptotic peptidase activating factor (APAF1), transcript variant 2, mRNAXM_881260PREDICTED: Bos taurus similar to Apoptotic protease activating factor 1 (Apaf-1), transcript variant 5 (LOC537782), mRNA1e-20btcn29775 Bt.27298.1.A1_at (945 bases away)
11392:45728_7424771-A:rNM_013229, NM_181869, NM_181868, NM_001160, NM_181861Homo sapiens apoptotic peptidase activating factor (APAF1), transcript variant 2, mRNAbtcn29775 Bt.27298.1.A1_at (945 bases away)
11393:11056_7419129-A:fNM_181670Homo sapiens ankyrin repeat and sterile alpha motif domain containing 1B (ANKS1B), transcript variant 2, mRNAXM_867673PREDICTED: Bos taurus similar to cajalin 2 isoform b (LOC615777), mRNA4e-33btcn29770 Bt.27298.1.A1_at (19860 bases away)
11394:4202_CL1Contig1-B:fNM_006315 (97493 bases away)Homo sapiens polycomb group ring finger 3 (PCGF3), mRNANM_175798Bos taurus CD38 antigen (CD38), mRNA1e-30btcn43705 Bt.248.1.S1_at
11397:15650_CL1Contig1-B:fXM_586611PREDICTED: Bos taurus similar to GlcNAc phosphotransferase (LOC509610), mRNA4e-33
11398:1716_CL1Contig1-A:rNM_153694Homo sapiens synaptonemal complex protein 3 (SYCP3), mRNADT849406, btcn50596, btcn50598, btcn50595 Bt.17096.1.S1_at, Bt.2479.1.A1_at, Bt.22082.1.S1_at, Bt.23635.1.S1_at, Bt.17096.2.A1_at Bt.17096.1.S1_at, Bt.23635.1.S1_at Bt.17096.1.S1_at, Bt.22082.1.S1_at, Bt.23635.1.S1_at, Bt.17096.2.A1_at Bt.17096.1.S1_at, Bt.2479.1.A1_at, Bt.22082.1.S1_at, Bt.23635.1.S1_at, Bt.17096.2.A1_at
11399:1536_CL2Contig2-B:fNM_206820, NM_206821, NM_002465, NM_206819Homo sapiens myosin binding protein C, slow type (MYBPC1), transcript variant 1, mRNAXM_587956PREDICTED: Bos taurus similar to myosin binding protein C, slow type isoform 3 (LOC510763), partial mRNA4e-33DV776199, DV791420, DV796997, btcn50601, btcn50603, btcn50607, DV797855, DV792512, DV794086, DV795044 Bt.23229.1.S1_at (2025 bases away) Bt.23229.1.S1_at Bt.23229.1.S1_at Bt.23229.1.S1_at Bt.23229.2.S1_at, Bt.23229.1.S1_at, Bt.10310.1.S1_at Bt.23229.1.S1_at (3743 bases away) Bt.23229.2.S1_at (29 bases away) Bt.23229.1.S1_at (2566 bases away) Bt.23229.2.S1_at (37 bases away) Bt.23229.2.S1_at (1 bases away)
113:45360_CL296Contig1-B:fNM_005688Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 5 (ABCC5), transcript variant 1, mRNAXM_589168PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family C, member 5 isoform 1, transcript variant 1 (LOC511769), mRNA4e-33btcn871, btcn870, CB426969 Bt.20007.1.S1_a_at, Bt.20007.3.S1_at Bt.20007.1.S1_a_at, Bt.20007.3.S1_at Bt.20007.1.S1_a_at, Bt.20007.3.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11400:3605_42730325-A:rNM_017564Homo sapiens stabilin 2 (STAB2), mRNAXM_608573PREDICTED: Bos taurus putative hyaluronan receptor for endocytosis (hare), mRNA6e-26DY214281 Bt.28382.1.S1_at (1904 bases away)
11401:3605_6961863-A:fXM_608573PREDICTED: Bos taurus putative hyaluronan receptor for endocytosis (hare), mRNA4e-33AW430556
11402:1158_47687070-A:fNM_004075Homo sapiens cryptochrome 1 (photolyase-like) (CRY1), mRNAbtcn41796 Bt.8995.1.A1_at
11404:1710_CL1Contig2-A:fNM_001033050, NM_025198Homo sapiens MTERF domain containing 3 (MTERFD3), transcript variant 2, mRNADV775451, btcn41794, btcn41795 Bt.26837.1.S1_at (3867 bases away) Bt.8995.1.A1_at (2591 bases away) Bt.26837.1.S1_at (3599 bases away)
11405:11587_CL1Contig1-B:fNM_152261Homo sapiens chromosome 12 open reading frame 23 (C12orf23), mRNANM_001034673Bos taurus hypothetical LOC539347 (MGC127570), mRNA4e-33btcn41799 Bt.26837.1.S1_at, Bt.17361.1.A1_at
11406:28643_CL2Contig1-B:fNM_018157Homo sapiens resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) (RIC8B), mRNAXM_601161PREDICTED: Bos taurus similar to resistance to inhibitors of cholinesterase 8B isoform 2 (LOC522873), mRNA4e-33btcn41791 Bt.19033.2.A1_at, Bt.19033.1.S1_at
11407:4148_CL1Contig1-A:rXM_613459PREDICTED: Bos taurus similar to regulatory factor X4 isoform c (LOC533900), mRNA4e-33
11408:1624_CL2Contig1-B:rNM_018082Homo sapiens polymerase (RNA) III (DNA directed) polypeptide B (POLR3B), mRNAXM_613382PREDICTED: Bos taurus similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) (LOC540839), mRNA4e-33DV922682, btcn41797 Bt.27875.1.A1_at Bt.25015.1.A1_at, Bt.27875.1.A1_at
11409:45360_CL1059Contig1-A:fNM_152890Homo sapiens collagen, type XXIV, alpha 1 (COL24A1), mRNAXM_609742PREDICTED: Bos taurus similar to collagen, type XXIV, alpha 1 (LOC531254), mRNA4e-27btcn29687 Bt.25404.1.A1_at, Bt.25404.2.S1_at
1140:45360_CL521Contig1-B:fNM_205787Bos taurus pancreatic thread protein (PTP), mRNA4e-33
11410:8960_CL1Contig1-B:fXM_868462PREDICTED: Bos taurus similar to Spi-C transcription factor (Spi-1/PU.1 related) (LOC616438), mRNA4e-33
11411:3458_CL8Contig1-B:fNM_001177Homo sapiens ADP-ribosylation factor-like 1 (ARL1), mRNAXM_595514PREDICTED: Bos taurus similar to ADP-ribosylation factor-like 1 (LOC517345), mRNA4e-33btcn29677 Bt.24524.1.S1_at, Bt.17963.1.A1_at, Bt.24524.2.A1_at
11412:13059_CL1Contig1-B:fXM_936222, NM_014503Homo sapiens UTP20, small subunit (SSU) processome component, homolog (yeast) (UTP20), mRNAXM_587627PREDICTED: Bos taurus similar to Down-regulated in metastasis protein (Key-1A6 protein) (Novel nucleolar protein 73) (NNP73) (LOC510487), mRNA4e-33btcn29681 Bt.16796.1.A1_at
11413:1677_45061742-A:fNM_178826Homo sapiens transmembrane protein 16D (TMEM16D), mRNAXM_881368PREDICTED: Bos taurus similar to transmembrane protein 16D, transcript variant 2 (LOC518739), mRNA4e-33btcn29686 Bt.16796.1.A1_at (246446 bases away)
11414:16746_19509608-A:fXM_942780, XM_942776, NM_133477, XM_936336Homo sapiens synaptopodin 2 (SYNPO2), mRNAXM_593330PREDICTED: Bos taurus similar to synaptopodin 2 (LOC540340), mRNA4e-33btcn12427, btcn12432 Bt.23081.1.S1_at, Bt.23081.1.S1_a_at Bt.23081.1.S1_at, Bt.23081.1.S1_a_at, Bt.26521.1.S1_at
11415:3447_CL1Contig1-B:rNM_016599Homo sapiens myozenin 2 (MYOZ2), mRNANM_001015676Bos taurus myozenin 2 (MYOZ2), mRNA4e-33DV797983, btcn12428, DV798149, btcn12429, btcn12426, DV799189 Bt.3070.1.S1_at, Bt.3070.2.S1_a_at, Bt.3070.2.S1_at, Bt.10550.1.A1_at Bt.3070.2.S1_a_at, Bt.3070.2.S1_at, Bt.10550.1.A1_at Bt.3070.1.S1_at, Bt.3070.2.S1_a_at, Bt.3070.2.S1_at, Bt.10550.1.A1_at Bt.3070.1.S1_at, Bt.3070.2.S1_a_at, Bt.3070.2.S1_at, Bt.10550.1.A1_at Bt.3070.1.S1_at, Bt.3070.2.S1_a_at, Bt.3070.2.S1_at, Bt.10550.1.A1_at Bt.3070.1.S1_at, Bt.3070.2.S1_a_at, Bt.3070.2.S1_at, Bt.10550.1.A1_at
11416:28734_CL1Contig1-A:fNM_019050Homo sapiens ubiquitin specific peptidase 53 (USP53), mRNAXM_607910PREDICTED: Bos taurus similar to ubiquitin specific protease 53, transcript variant 2 (LOC529462), mRNA4e-33btcn12439 Bt.28530.1.A1_at
11417:44858_CL1Contig1-A:rNM_001001701Homo sapiens HCV F-transactivated protein 1 (LOC401152), mRNAXM_866688PREDICTED: Bos taurus hypothetical protein LOC615008 (LOC615008), mRNA4e-33btcn12438 Bt.3287.1.S1_at
11418:3788_18529757-B:fNM_001025332Bos taurus fatty acid binding protein 2, intestinal (FABP2), mRNA4e-33
11419:779_CL1Contig1-B:fXM_873797PREDICTED: Bos taurus similar to Signal recognition particle 72 kDa protein (SRP72), transcript variant 8 (LOC509430), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1141:7389_CL2Contig1-B:fNM_001004720, NM_003581, NM_001004722Homo sapiens NCK adaptor protein 2 (NCK2), transcript variant 1, mRNAXM_604801PREDICTED: Bos taurus similar to Cytoplasmic protein NCK2 (NCK adaptor protein 2) (SH2/SH3 adaptor protein NCK-beta) (Nck-2) (LOC526430), mRNA4e-33btcn41974 Bt.10999.1.A1_at, Bt.10999.2.S1_at
11420:11813_CL1Contig1-B:rNM_205813Bos taurus phosphoribosylaminoimidazole carboxylase (PAICS), mRNA4e-33
11423:11859_CL1Contig1-B:fNM_002703, NM_006452Homo sapiens phosphoribosyl pyrophosphate amidotransferase (PPAT), mRNAXM_586663PREDICTED: Bos taurus similar to phosphoribosyl pyrophosphate amidotransferase proprotein (LOC509652), mRNA4e-33CR455242, btcn27952 Bt.26657.1.S1_at (38502 bases away) Bt.7014.1.S1_at (16435 bases away)
11425:10786_CL1Contig1-B:rNM_181806, NM_006452Homo sapiens phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS), mRNAbtcn27956 Bt.26657.1.S1_at
11426:17007_CL2Contig1-B:fXM_943125, XM_044178, NM_006452Homo sapiens phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase (PAICS), mRNAXM_588559PREDICTED: Bos taurus hypothetical LOC511259 (LOC511259), mRNA4e-33btcn27960 Bt.3696.1.A1_at (615 bases away)
11427:34974_CL20Contig1-B:fNM_002253Homo sapiens kinase insert domain receptor (a type III receptor tyrosine kinase) (KDR), mRNAXM_611785PREDICTED: Bos taurus similar to kinase insert domain receptor (a type III receptor tyrosine kinase) (LOC532646), partial mRNA4e-33btcn5051 Bt.13860.1.S1_at, Bt.13860.2.A1_at
11428:30129_CL1Contig1-B:rNM_017845Homo sapiens COMM domain containing 8 (COMMD8), mRNAXM_583879PREDICTED: Bos taurus similar to COMM domain containing protein 8 (LOC507292), mRNA4e-33CB166696, btcn51757 Bt.4554.1.S1_at (9735 bases away) Bt.4554.1.S1_at
11429:34974_CL23Contig1-B:rNM_000222Homo sapiens v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT), mRNAXM_612028PREDICTED: Bos taurus v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT), mRNA4e-33btcn1402 Bt.12804.1.A1_at, Bt.12804.1.S1_at, Bt.26445.1.A1_at, Bt.27675.1.A1_at
1142:15285_CL1Contig1-B:fNM_001002924 (66135 bases away)Homo sapiens adaptor-related protein complex 3, sigma 1 subunit (AP3S1), transcript variant 2, mRNANM_001038113Bos taurus esophageal cancer related gene 4 protein (ECRG4), mRNA4e-33btcn41972 Bt.26513.1.S1_at
11431:11779_7425431-A:fNM_145263Homo sapiens spermatogenesis associated 18 homolog (rat) (SPATA18), mRNAXM_867608PREDICTED: Bos taurus similar to spermatogenesis associated 18 homolog (LOC615729), mRNA4e-27btcn31690 Bt.17268.1.A1_at (2867 bases away)
11432:21551_CL1Contig1-B:rNM_023940 (12 bases away)Homo sapiens RAS-like, family 11, member B (RASL11B), mRNANM_001015635Bos taurus RAS-like family 11, member B (RASL11B), mRNA4e-33btcn51983 Bt.28723.1.A1_at, Bt.1974.1.S1_at
11433:185_CL1Contig1-A:fNM_152540Homo sapiens sec1 family domain containing 2 (SCFD2), mRNAXM_615133PREDICTED: Bos taurus similar to sec1 family domain containing 2 (LOC535130), mRNA1e-30btcn51981 Bt.27398.1.A1_at, Bt.26497.1.A1_at
11434:9746_CL1Contig2-B:rNM_030917, NM_032622Homo sapiens FIP1 like 1 (S. cerevisiae) (FIP1L1), mRNAXM_865236PREDICTED: Bos taurus similar to multi-PDZ-domain-containing protein, transcript variant 5 (LOC540694), mRNA4e-33btcn53199, btcn53202, btcn53205 Bt.20168.2.S1_at, Bt.20168.3.A1_a_at, Bt.20168.1.A1_at Bt.20168.2.S1_at, Bt.20168.3.A1_a_at, Bt.20168.1.A1_at Bt.20168.2.S1_at, Bt.20168.3.A1_a_at, Bt.20168.1.A1_at
11435:13534_CL1Contig1-B:rNM_032622Homo sapiens ligand of numb-protein X 1 (LNX1), mRNAXM_865236PREDICTED: Bos taurus similar to multi-PDZ-domain-containing protein, transcript variant 5 (LOC540694), mRNA4e-33btcn53202 Bt.20168.2.S1_at, Bt.20168.3.A1_a_at, Bt.20168.1.A1_at
11436:1624_CL4Contig1-B:fNM_005612, NM_021114Homo sapiens RE1-silencing transcription factor (REST), mRNAXM_605127PREDICTED: Bos taurus similar to polymerase (RNA) II (DNA directed) polypeptide B (LOC526753), partial mRNA4e-33BE723415 Bt.20474.1.S1_at (17456 bases away)
11437:9196_CL1Contig3-B:fNM_032313Homo sapiens chromosome 4 open reading frame 14 (C4orf14), mRNANM_001038188Bos taurus similar to CG10914-PA (MGC133698), mRNA4e-33btcn46779, BC109654, btcn46777, btcn46780, CB430026 Bt.21058.2.S1_at, Bt.21058.1.A1_a_at Bt.21058.2.S1_at, Bt.21058.1.A1_a_at Bt.21058.2.S1_at, Bt.21058.1.A1_a_at Bt.21058.1.A1_a_at (3872 bases away) Bt.21058.2.S1_at, Bt.21058.1.A1_a_at
11439:36984_CL1Contig1-A:rNM_174097Bos taurus homeodomain only protein (LAGY), mRNA4e-33
1143:28663_CL1Contig1-B:fNM_003849Homo sapiens succinate-CoA ligase, GDP-forming, alpha subunit (SUCLG1), mRNANM_001035082Bos taurus succinate-CoA ligase, GDP-forming, alpha subunit (SUCLG1), mRNA4e-33btcn24016, btcn24014, DV784624, BI539691, DV793478, BI539705 Bt.2711.1.S1_at Bt.2711.1.S1_at Bt.2711.1.S1_at Bt.2711.1.S1_at Bt.2711.1.S1_at Bt.2711.1.S1_at
11441:45360_12281817-A:fXM_586451PREDICTED: Bos taurus similar to centrosome protein 4 (LOC509483), partial mRNA2e-26
11442:720_CL1Contig1-B:f

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11444:13133_CL1Contig1-B:fNM_018475Homo sapiens transmembrane protein 165 (TMEM165), mRNAXM_611725PREDICTED: Bos taurus similar to TPA regulated locus (LOC532600), mRNA4e-33btcn15943 Bt.4994.1.S1_at
11445:23383_48490130-A:rNM_001553Homo sapiens insulin-like growth factor binding protein 7 (IGFBP7), mRNAXM_868373PREDICTED: Bos taurus similar to Insulin-like growth factor binding protein 7 precursor (IGFBP-7) (IBP-7) (IGF-binding protein 7) (MAC25 protein) (Prostacyclin-stimulating factor) (PGI2-stimulating factor) (IGFBP-rP1) (LOC616368), mRNA1e-30DT836978, btcn46748, DV776628, btcn23530 Bt.2214.1.S1_at Bt.2214.1.S1_at, Bt.2214.2.A1_at Bt.2214.1.S1_at, Bt.2214.2.A1_at Bt.2214.1.S1_at
11448:43678_45481958-A:fNM_021064, NM_003530, NM_021065Homo sapiens histone 1, H3d (HIST1H3D), mRNAbtcn46764 Bt.10166.1.A1_at
11449:34416_CL2Contig2-B:rNM_021064, NM_003530, NM_021065, NM_013375Homo sapiens histone 1, H3d (HIST1H3D), mRNAXM_586106PREDICTED: Bos taurus similar to activator of basal transcription 1 (LOC539270), mRNA1e-30btcn46752, CK958660 Bt.28507.1.A1_at Bt.28507.1.A1_at (1091 bases away)
1144:15422_10170953-A:fNM_004389Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2), mRNAXM_605884PREDICTED: Bos taurus similar to Alpha-2 catenin (Alpha-catenin-related protein) (Alpha N-catenin) (LOC527492), partial mRNA4e-33BE756961 Bt.3567.1.S1_at (785223 bases away)
11453:45360_9021111-A:fNM_003530, NM_003538Homo sapiens histone 1, H3d (HIST1H3D), mRNAXM_868705PREDICTED: Bos taurus similar to Histone H2A.1 (LOC616634), mRNA3e-28BE236393, btcn46761 Bt.18023.1.S1_at (107355 bases away) Bt.18023.1.S1_at (92426 bases away)
11454:25978_11917540-A:fNM_005865Homo sapiens protease, serine, 16 (thymus) (PRSS16), mRNAXM_865572PREDICTED: Bos taurus similar to Thymus-specific serine protease precursor, transcript variant 1 (LOC614489), mRNA4e-33btcn46757, btcn46758 Bt.20523.1.S1_at (2464 bases away) Bt.20523.1.S1_at (2285 bases away)
11455:25978_CL1Contig2-B:rNM_005865Homo sapiens protease, serine, 16 (thymus) (PRSS16), mRNAXM_865572PREDICTED: Bos taurus similar to Thymus-specific serine protease precursor, transcript variant 1 (LOC614489), mRNA4e-33btcn46763, DT844824, btcn46762 Bt.20523.1.S1_at Bt.20523.1.S1_at Bt.20523.1.S1_at
11456:15711_CL1Contig1-B:fNM_001046Homo sapiens solute carrier family 12 (sodium/potassium/chloride transporters), member 2 (SLC12A2), mRNAbtcn1634, btcn1633 Bt.4793.1.S2_at (166 bases away) Bt.4793.1.S1_at, Bt.4793.1.S2_at
1145:33554_CL1Contig1-A:rNM_178839Homo sapiens leucine rich repeat transmembrane neuronal 1 (LRRTM1), mRNAXM_580422PREDICTED: Bos taurus similar to leucine rich repeat transmembrane neuronal 1 (LOC538452), mRNA2e-25btcn13175 Bt.24671.1.A1_at (1632924 bases away)
11461:11081_CL1Contig1-B:fNM_000406, NM_001012763Homo sapiens gonadotropin-releasing hormone receptor (GNRHR), transcript variant 1, mRNANM_177514Bos taurus gonadotropin-releasing hormone receptor (GNRHR), mRNA4e-33btcn38844 Bt.135.1.S1_at
11463:26905_18452430-A:fNM_001812Homo sapiens centromere protein C 1 (CENPC1), mRNAXM_616717PREDICTED: Bos taurus similar to Centromere protein C (CENP-C) (Centromere autoantigen C) (LOC613435), mRNA4e-33btcn38840 Bt.27042.1.S1_at, Bt.8609.1.S1_s_at
11464:45360_CL1149Contig1-B:rNM_004262Homo sapiens transmembrane protease, serine 11D (TMPRSS11D), mRNAbtcn38843 Bt.135.1.S1_at (95143 bases away)
11468:34974_47686919-A:fNM_002253Homo sapiens kinase insert domain receptor (a type III receptor tyrosine kinase) (KDR), mRNAXM_612264PREDICTED: Bos taurus tyrosine kinase receptor (flk-1), partial mRNA4e-33btcn37525 Bt.29836.1.S1_at, Bt.29836.1.A1_at
11469:25172_CL2Contig1-B:rNM_001004346Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like (MTHFD2L), mRNAXM_616395PREDICTED: Bos taurus similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like (LOC536269), mRNA4e-33btcn43051 Bt.26545.1.A1_at
11470:10930_CL3Contig2-A:rNM_002090 (9885 bases away)Homo sapiens chemokine (C-X-C motif) ligand 3 (CXCL3), mRNANM_175700Bos taurus chemokine (C-X-C motif) ligand 1 (CXCL1), mRNA4e-33btcn43050 Bt.611.1.S1_at, Bt.611.1.S1_x_at, Bt.611.1.S2_at
11471:10930_CL2Contig1-A:rNM_002090 (9931 bases away)Homo sapiens chemokine (C-X-C motif) ligand 3 (CXCL3), mRNAXM_864683PREDICTED: Bos taurus similar to Macrophage inflammatory protein 2-beta precursor (MIP2-beta) (CXCL3) (Growth regulated protein gamma) (GRO-gamma) (GRO-gamma(1-73)) (LOC613667), mRNA3e-12btcn43050 Bt.611.1.S1_at, Bt.611.1.S1_x_at, Bt.611.1.S2_at
11472:10930_49410884-A:fNM_002090, NM_001511Homo sapiens chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) (CXCL1), mRNAXM_864712PREDICTED: Bos taurus similar to chemokine (C-X-C motif) ligand 15 (LOC613685), mRNA4e-33AJ678299 Bt.610.1.A1_at (7751 bases away)
11473:26685_CL1Contig1-A:fNM_002620Homo sapiens platelet factor 4 variant 1 (PF4V1), mRNAXM_584467PREDICTED: Bos taurus similar to Platelet factor 4 precursor (PF-4) (CXCL4) (Oncostatin A) (Iroplact) (LOC507790), mRNA4e-33btcn43043 Bt.11581.1.S1_at
11474:10930_CL6Contig1-A:rNM_002620 (8727 bases away)Homo sapiens platelet factor 4 variant 1 (PF4V1), mRNAXM_864771PREDICTED: Bos taurus similar to Platelet basic protein precursor (PBP) (Small inducible cytokine B7) (CXCL7) (Leukocyte-derived growth factor) (LDGF) (Macrophage-derived growth factor) (MDGF) (LOC613723), mRNA4e-33DR113704, btcn43042 Bt.11581.1.S1_at (8109 bases away) Bt.11581.1.S1_at (7744 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11476:10930_CL4Contig1-B:fNM_000584Homo sapiens interleukin 8 (IL8), mRNANM_173925Bos taurus interleukin 8 (IL8), mRNA1e-30btcn43049 Bt.155.1.S1_at
11478:2180_CL5Contig1-B:rNM_014465Homo sapiens sulfotransferase family, cytosolic, 1B, member 1 (SULT1B1), mRNAXM_600193PREDICTED: Bos taurus similar to sulfotransferase family, cytosolic, 1B, member 1 (LOC521920), mRNA4e-33btcn53583 Bt.13723.1.S1_at
11479:2180_29396321-B:fNM_005420 (10938 bases away)Homo sapiens sulfotransferase family 1E, estrogen-preferring, member 1 (SULT1E1), mRNANM_177488Bos taurus sulfotransferase, estrogen-preferring (STE), mRNA4e-33btcn53581, btcn53582, CB532528 Bt.300.1.A1_at (9415 bases away) Bt.300.1.A1_at Bt.300.1.A1_at (12 bases away)
1147:8125_6954901-A:fNM_014709Homo sapiens ubiquitin specific peptidase 34 (USP34), mRNAXM_605247PREDICTED: Bos taurus similar to ubiquitin specific protease 34 (LOC526868), partial mRNA4e-33AW426954 Bt.28952.1.S1_at (24606 bases away)
11481:2807_CL3Contig1-B:rNM_005506Homo sapiens scavenger receptor class B, member 2 (SCARB2), mRNAXM_612497PREDICTED: Bos taurus similar to Lysosome membrane protein II (LIMP II) (Scavenger receptor class B, member 2) (85 kDa lysosomal membrane sialoglycoprotein) (LGP85) (CD36 antigen-like 2) (LOC533177), mRNA4e-33btcn20584 Bt.11224.1.S1_at
11482:45360_CL1017Contig1-A:rNM_005506 (41351 bases away)Homo sapiens scavenger receptor class B, member 2 (SCARB2), mRNAXM_585328PREDICTED: Bos taurus similar to Protein FAM47A (LOC508540), mRNA2e-23btcn31030.79, btcn20600 Bt.11224.1.S1_at (9092 bases away) Bt.8441.3.S1_at (48029 bases away)
11483:45360_CL1401Contig1-B:fXM_585328PREDICTED: Bos taurus similar to Protein FAM47A (LOC508540), mRNA1e-30
11484:5425_CL1Contig1-A:fNM_003943Homo sapiens genethonin 1 (GENX-3414), mRNAXM_591045PREDICTED: Bos taurus similar to Genethonin 1 (GENX-3414) (LOC513376), mRNA4e-33btcn20586, DV797145 Bt.8441.3.S1_at, Bt.8441.1.A1_at, Bt.8441.2.S1_at Bt.8441.3.S1_at, Bt.8441.1.A1_at, Bt.8441.2.S1_at
11485:36982_CL1Contig1-B:fNM_178555, NM_001042784Homo sapiens hypothetical protein FLJ25770 (FLJ25770), transcript variant 2, mRNAXM_872417PREDICTED: Bos taurus similar to hyaluronan mediated motility receptor, transcript variant 6 (LOC534614), mRNA4e-33btcn20602 Bt.16674.1.A1_at
11486:17386_CL1Contig1-B:fNM_020859Homo sapiens shroom family member 3 (SHROOM3), mRNAXM_592451PREDICTED: Bos taurus similar to shroom (LOC514577), mRNA4e-33btcn20583 Bt.9672.1.S1_at
11487:1841_CL1Contig1-A:rNM_001029870Homo sapiens ankyrin repeat domain 56 (ANKRD56), mRNAXM_589866PREDICTED: Bos taurus similar to CG10632-PA (LOC512359), mRNA4e-33DV785557, btcn20596, DV782983 Bt.28927.1.S1_at (78243 bases away) Bt.28927.1.S1_at (76544 bases away) Bt.28927.1.S1_at (77448 bases away)
11488:45360_CL424Contig1-B:fNM_018243Homo sapiens septin 11 (SEPT11), mRNAXM_864283PREDICTED: Bos taurus similar to Septin-11, transcript variant 2 (LOC535746), mRNA4e-33btcn20590, btcn20587, btcn20588, btcn20591 Bt.11797.2.S1_at, Bt.19408.1.A1_at Bt.11797.2.S1_at, Bt.19408.1.A1_at, Bt.11797.1.S1_at, Bt.11797.3.A1_at Bt.11797.2.S1_at, Bt.19408.1.A1_at, Bt.11797.1.S1_at, Bt.23308.1.S1_at, Bt.11797.3.A1_at Bt.19408.1.A1_at
11489:1825_28315001-A:fNM_006835Homo sapiens cyclin I (CCNI), mRNAXM_864393PREDICTED: Bos taurus similar to cyclin I, transcript variant 4 (LOC504847), mRNA6e-29DV789922, DT815525, btcn20576, btcn20581 Bt.11389.1.S1_at (664 bases away) Bt.11389.1.S1_at (23 bases away) Bt.11389.1.S1_a_at, Bt.11389.1.S1_at, Bt.11389.2.S1_at Bt.11389.1.S1_a_at, Bt.11389.1.S1_at, Bt.11389.2.S1_at
1148:3409_7420106-A:fNM_006952Homo sapiens uroplakin 1B (UPK1B), mRNANM_174482Bos taurus uroplakin IB (UPK1B), mRNA1e-30btcn23212 Bt.4089.1.S1_at
11490:21668_CL1Contig1-A:rNM_175773Bos taurus immunoglobulin J chain (IGJ), mRNA4e-33
11492:9739_51826289-A:fNM_020368Homo sapiens disrupter of silencing 10 (SAS10), mRNAbtcn49203 Bt.27417.2.S1_at, Bt.27417.1.A1_at
11493:32575_CL7Contig1-B:fXM_874256PREDICTED: Bos taurus similar to RUN and FYVE domain-containing 1, transcript variant 12 (LOC514798), mRNA4e-33
11494:22061_45208435-B:fNM_173468Homo sapiens MOB1, Mps One Binder kinase activator-like 1A (yeast) (MOBKL1A), mRNAXM_593426PREDICTED: Bos taurus similar to Mps one binder kinase activator-like 1A (Mob1 homolog 1A) (LOC515407), mRNA4e-33AM037582, btcn49194 Bt.16235.1.A1_at Bt.16235.1.A1_at
11495:11260_61731605-A:fNM_000788Homo sapiens deoxycytidine kinase (DCK), mRNANM_001034573Bos taurus similar to Deoxycytidine kinase (dCK) (MGC127248), mRNA3e-28btcn49202 Bt.27090.1.S1_at
11496:44331_CL1Contig2-B:rNM_020533Homo sapiens mucolipin 1 (MCOLN1), mRNADV907165, btcn49208, btcn49209 Bt.26509.1.S1_at (1125 bases away) Bt.26509.1.S1_at (1648 bases away) Bt.26509.1.S1_at (1697 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11497:9441_CL1Contig1-B:rNM_005178Homo sapiens B-cell CLL/lymphoma 3 (BCL3), mRNAXM_610447PREDICTED: Bos taurus similar to B-cell lymphoma 3-encoded protein (Bcl-3 protein) (LOC531942), mRNA4e-33BF043238, btcn34527 Bt.16930.2.S1_at Bt.16930.1.A1_at, Bt.16930.2.S1_at
11499:106_10028167-A:fXM_589369PREDICTED: Bos taurus similar to carcinoembryonic antigen-like 1 (LOC511941), mRNA4e-33
1149:983_CL4Contig1-B:rNM_003778, NM_212543Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 (B4GALT4), transcript variant 2, mRNANM_001038078Bos taurus similar to Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4) (Beta4Gal-T4) (b4Gal-T4) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 4) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 4) (MGC133851), mRNA4e-33btcn20017, btcn23210 Bt.3943.1.A1_at (4611 bases away) Bt.3943.1.A1_at
11500:40734_CL1Contig1-B:r
11501:9413_CL1Contig1-B:rXR_001380 (7573 bases away)PREDICTED: Homo sapiens hypothetical LOC376693 (LOC376693), misc RNAXM_591805PREDICTED: Bos taurus similar to CEA-related cell adhesion molecule 20 (LOC514022), mRNA4e-33btcn34534 Bt.22462.1.A1_at (27367 bases away)
11502:45360_CL824Contig1-B:rNM_013256Homo sapiens zinc finger protein 180 (ZNF180), mRNAXM_875157PREDICTED: Bos taurus similar to Zinc finger protein 180 (HHZ168), transcript variant 3 (LOC514023), mRNA4e-33btcn34531, DV818655, btcn34529 Bt.22462.1.A1_at Bt.22462.1.A1_at (6043 bases away) Bt.22462.1.A1_at (2867 bases away)
11503:10930_11997853-A:fNM_002090, NM_002089Homo sapiens chemokine (C-X-C motif) ligand 2 (CXCL2), mRNABF706255, btcn40462 Bt.610.1.A1_at (737 bases away) Bt.610.1.A1_at
11504:20822_CL1Contig1-B:fNM_001565Homo sapiens chemokine (C-X-C motif) ligand 10 (CXCL10), mRNAXM_866821PREDICTED: Bos taurus similar to Small inducible cytokine B10 precursor (CXCL10) (10 kDa interferon-gamma induced protein) (Gamma-IP10) (IP-10) (LOC615107), mRNA4e-33btcn11577 Bt.16966.1.S1_at
11505:22231_CL1Contig1-A:fNM_002416Homo sapiens chemokine (C-X-C motif) ligand 9 (CXCL9), mRNAXM_591770PREDICTED: Bos taurus similar to small inducible cytokine B9 precursor (LOC513990), mRNA4e-33btcn11575 Bt.16966.1.S1_at (19072 bases away)
11506:1877_CL2Contig1-B:rNM_018115Homo sapiens SDA1 domain containing 1 (SDAD1), mRNAXM_875364PREDICTED: Bos taurus similar to SDA1 domain containing 1, transcript variant 2 (LOC507675), mRNA4e-33btcn11579, btcn11578 Bt.19687.2.S1_at (4008 bases away) Bt.19687.2.S1_at
11508:3675_CL2Contig2-B:rNM_001042402, NM_014435Homo sapiens N-acylsphingosine amidohydrolase (acid ceramidase)-like (ASAHL), transcript variant 1, mRNAXM_593385PREDICTED: Bos taurus similar to N-acylsphingosine amidohydrolase-like precursor (Acid ceramidase-like protein) (ASAH-like protein) (LOC515375), partial mRNA4e-33btcn23190, DT819722, AW464423, DT853739, btcn11576, DY104833 Bt.24570.1.S1_at Bt.24570.1.S1_at Bt.24570.1.S1_at (1623 bases away) Bt.24570.1.S1_at (1620 bases away) Bt.24570.1.S1_at Bt.24570.1.S1_at
11509:21161_CL1Contig1-A:fNM_015436, NM_001008925, NM_001009922Homo sapiens ring finger and CHY zinc finger domain containing 1 (RCHY1), transcript variant 1, mRNAXM_875733PREDICTED: Bos taurus similar to RING finger and CHY zinc finger domain containing protein 1 (Zinc finger protein 363) (CH-rich interacting match with PLAG1) (Androgen receptor N-terminal-interacting protein), transcript variant 2 (LOC540733), mRNA4e-33DV791568, DV780704, btcn13830, btcn13831 Bt.13497.1.S1_at Bt.13497.1.S1_at Bt.13497.1.S1_at Bt.13497.1.S1_at
1150:48_CL2Contig2-B:rNM_006430Homo sapiens chaperonin containing TCP1, subunit 4 (delta) (CCT4), mRNANM_001038194Bos taurus chaperonin containing TCP1, subunit 4 (delta) (CCT4), mRNA1e-30AJ672098, btcn26038, DV782395 Bt.6427.1.S1_at Bt.6427.1.S1_at Bt.6427.1.S1_at
11510:14689_CL1Contig1-B:fNM_017918Homo sapiens coiled-coil domain containing 109B (CCDC109B), mRNAXM_580892PREDICTED: Bos taurus similar to CG18769-PB, isoform B (LOC504728), partial mRNA4e-33btcn25503, btcn55674 Bt.18771.1.S1_at (3596 bases away) Bt.18771.1.S1_at (1218 bases away)
11511:13186_CL1Contig1-B:rNM_001226Homo sapiens caspase 6, apoptosis-related cysteine peptidase (CASP6), transcript variant alpha, mRNANM_001035419Bos taurus caspase 6, apoptosis-related cysteine peptidase (CASP6), mRNA4e-33btcn55667 Bt.20113.1.S1_at
11512:9122_CL1Contig1-B:rXM_928337, XM_941643PREDICTED: Homo sapiens hypothetical protein LOC645293 (LOC645293), mRNAXM_605604PREDICTED: Bos taurus similar to Group XIIA secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GXII) (GXII sPLA2) (LOC527214), mRNA1e-30btcn55675 Bt.22589.1.S1_at
11513:45360_C0007386c03-3-B:fNM_000204Homo sapiens complement factor I (CFI), mRNANM_001038096Bos taurus similar to complement factor I (MGC128240), mRNA2e-25DV789558, DV789434, btcn55669 Bt.13387.1.S1_at Bt.13387.1.S1_at Bt.13387.1.S1_at
11514:6686_29273153-A:fNM_144571, XM_496071, XM_939929Homo sapiens CCR4-NOT transcription complex, subunit 6-like (CNOT6L), mRNAXM_876016PREDICTED: Bos taurus similar to CCR4-NOT transcription complex, subunit 6-like isoform 1, transcript variant 3 (LOC518225), mRNA4e-33btcn36635 Bt.22449.2.S1_at (29581 bases away)
11515:45360_CL108Contig1-B:fNM_005139Homo sapiens annexin A3 (ANXA3), mRNANM_001035325Bos taurus similar to Annexin A3 (Annexin III) (Lipocortin III) (Placental anticoagulant protein III) (PAP-III) (35-alpha calcimedin) (Inositol 1,2-cyclic phosphate 2-phosphohydrolase) (MGC129048), mRNA4e-33btcn11534 Bt.6775.1.S1_at
11516:35967_CL7Contig1-A:fNM_001431Homo sapiens erythrocyte membrane protein band 4.1-like 2 (EPB41L2), mRNAXM_872426PREDICTED: Bos taurus similar to Band 4.1-like protein 2 (Generally expressed protein 4.1) (4.1G), transcript variant 4 (LOC538959), mRNA4e-33CB165333, btcn13944, btcn13946, CB041919 Bt.23392.1.S1_at (36366 bases away) Bt.16989.1.A1_at (30274 bases away) Bt.16989.1.A1_at Bt.23392.1.S1_at (28708 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11517:4456_28155009-A:rNM_033214Homo sapiens glycerol kinase 2 (GK2), mRNAXM_591790PREDICTED: Bos taurus similar to glycerol kinase 2 (LOC540143), mRNA4e-33CB168883 Bt.23438.1.S1_at (462706 bases away)
11518:45232_CL1Contig1-A:fNM_058172Homo sapiens anthrax toxin receptor 2 (ANTXR2), mRNAbtcn18760 Bt.12745.2.A1_at, Bt.23438.1.S1_at, Bt.12745.3.S1_at, Bt.12745.1.A1_at
11519:30511_CL2Contig1-B:rNM_058172Homo sapiens anthrax toxin receptor 2 (ANTXR2), mRNAXM_587175PREDICTED: Bos taurus similar to Anthrax toxin receptor 2 precursor (Capillary morphogenesis gene-2 protein) (CMG-2) (LOC510080), mRNA4e-33btcn18759, btcn18760 Bt.12745.2.A1_at Bt.12745.2.A1_at, Bt.23438.1.S1_at, Bt.12745.3.S1_at, Bt.12745.1.A1_at
1151:11764_C0007404i12-3-A:rNM_152516Homo sapiens copper metabolism (Murr1) domain containing 1 (COMMD1), mRNAXM_614537PREDICTED: Bos taurus similar to MURR1 (LOC534683), mRNA6e-26btcn26035, DY100368, DT719741 Bt.16038.1.S1_at, Bt.16038.1.S1_a_at Bt.16038.1.S1_at Bt.16038.1.S1_at, Bt.16038.1.S1_a_at
11520:15876_CL1Contig1-B:rNM_005570 (35264 bases away)Homo sapiens lectin, mannose-binding, 1 (LMAN1), mRNAXM_867386PREDICTED: Bos taurus similar to rabconnectin-3 beta isoform 1 (LOC615544), mRNA4e-27btcn48361 Bt.6623.2.S1_at (10794 bases away)
11521:1758_45057666-A:fNM_020226Homo sapiens PR domain containing 8 (PRDM8), mRNAXM_584581PREDICTED: Bos taurus similar to PR-domain zinc finger protein 8 (LOC507890), mRNA1e-30CK831516
11522:4315_45067035-A:fXM_587912PREDICTED: Bos taurus similar to Bone morphogenetic protein 3 precursor (BMP-3) (Osteogenin) (BMP-3A) (LOC539527), mRNA4e-33
11523:38019_CL41Contig1-A:fNM_006259Homo sapiens protein kinase, cGMP-dependent, type II (PRKG2), mRNAXM_612707PREDICTED: Bos taurus similar to protein kinase, cGMP-dependent, type II (LOC533330), mRNA4e-33btcn50418 Bt.3356.1.A1_at (34623 bases away)
11524:8316_CL1Contig1-B:rNM_021204Homo sapiens E-1 enzyme (MASA), mRNAXM_876153PREDICTED: Bos taurus similar to E-1 enzyme, transcript variant 3 (LOC525563), mRNA4e-33btcn5965, DV817481, btcn5970, DV935252, DV803056, btcn5975 Bt.3244.1.A1_at (96 bases away) Bt.3244.1.A1_at (354 bases away) Bt.3244.1.A1_at (422 bases away) Bt.3244.1.A1_at (159 bases away) Bt.3244.1.A1_at (520 bases away) Bt.3244.1.A1_at
11525:2987_CL1Contig2-B:rNM_031369, NM_002138, NM_031370, NM_001003810Homo sapiens heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) (HNRPD), transcript variant 3, mRNAXM_877706PREDICTED: Bos taurus similar to Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1), transcript variant 14 (LOC527471), mRNA4e-33DV792109, btcn5956, btcn5962, DV785541, btcn5954, btcn5958, btcn5961, btcn5953, DV782678, DV777348 Bt.3809.2.S1_a_at, Bt.27145.1.A1_at Bt.3809.2.S1_a_at Bt.3809.2.S1_a_at, Bt.27145.1.A1_at Bt.3809.2.S1_a_at Bt.3809.2.S1_a_at, Bt.27145.1.A1_at Bt.3809.2.S1_a_at, Bt.27145.1.A1_at Bt.3809.2.S1_a_at, Bt.27145.1.A1_at Bt.3809.2.S1_a_at Bt.3809.2.S1_a_at, Bt.27145.1.A1_at Bt.3809.2.S1_a_at
11526:44668_CL1Contig1-B:fNM_032494Homo sapiens zinc finger CCCH-type containing 8 (ZC3H8), mRNAXM_583517PREDICTED: Bos taurus similar to Zinc finger CCCH-type domain containing protein 8 (LOC506983), mRNA4e-33BE668482, btcn36224 Bt.29569.2.S1_at Bt.29569.2.S1_at, Bt.29569.1.A1_at
11527:16919_CL2Contig1-B:rXM_938685PREDICTED: Homo sapiens hypothetical protein LOC649616 (LOC649616), mRNAXM_614365PREDICTED: Bos taurus hypothetical LOC534560, transcript variant 1 (LOC534560), mRNA4e-33btcn26608.1, btcn7052.1 Bt.2578.1.A1_at, Bt.14166.1.A1_at, Bt.14166.2.S1_at Bt.2578.1.A1_at, Bt.14166.1.A1_at, Bt.14166.2.S1_at
11528:3144_CL2Contig1-B:fNM_152545Homo sapiens RasGEF domain family, member 1B (RASGEF1B), mRNAXM_583505PREDICTED: Bos taurus similar to RasGEF domain family, member 1B, transcript variant 1 (LOC506971), mRNA4e-33btcn54445 Bt.27826.1.S1_at, Bt.6800.1.A1_at
11529:6863_CL2Contig1-A:fNM_138980, NM_002753, NM_138981, NM_138982Homo sapiens mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNAXM_878174PREDICTED: Bos taurus similar to mitogen-activated protein kinase 10 isoform 3, transcript variant 6 (LOC537631), mRNA4e-33btcn38047 Bt.26656.1.S1_at
1152:2265_CL3Contig2-A:rNM_006577Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3GNT2), mRNAXM_592578PREDICTED: Bos taurus hypothetical LOC514686 (LOC514686), mRNA4e-33btcn26037, DT719741 Bt.15905.1.S1_at Bt.16038.1.S1_at, Bt.16038.1.S1_a_at
11530:3938_CL1Contig1-B:fNM_031305, NM_001025616, NM_001042669Homo sapiens Rho GTPase activating protein 24 (ARHGAP24), transcript variant 2, mRNAXM_866342PREDICTED: Bos taurus similar to Rho GTPase activating protein 24 (predicted), transcript variant 3 (LOC539902), mRNA4e-33btcn38040 Bt.3313.3.S1_at, Bt.3313.2.S1_at, Bt.3313.1.A1_at
11531:3938_CL4Contig1-A:fNM_001025616Homo sapiens Rho GTPase activating protein 24 (ARHGAP24), transcript variant 1, mRNAbtcn38040 Bt.3313.3.S1_at, Bt.3313.2.S1_at, Bt.3313.1.A1_at
11532:32575_CL11Contig2-A:fNM_014991Homo sapiens WD repeat and FYVE domain containing 3 (WDFY3), transcript variant 1, mRNAXM_617252PREDICTED: Bos taurus similar to WD repeat and FYVE domain containing 3 isoform 1 (LOC537096), mRNA4e-33btcn38051 Bt.4685.1.S1_at, Bt.2222.2.S1_at
11533:31418_CL1Contig1-A:fNM_005935Homo sapiens AF4/FMR2 family, member 1 (AFF1), mRNAbtcn3399 Bt.8384.1.S1_at
11534:28277_CL3Contig1-B:rXM_601381PREDICTED: Bos taurus similar to AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4) (FEL protein) (LOC523087), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11537:28277_CL2Contig1-B:rNM_005935, XM_936246Homo sapiens AF4/FMR2 family, member 1 (AFF1), mRNAbtcn3404, btcn3408 Bt.15476.1.A1_at Bt.15476.1.A1_at
11538:8863_CL1Contig1-B:rNM_198038, NM_024047Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 9 (NUDT9), transcript variant 1, mRNAXM_595761PREDICTED: Bos taurus similar to nudix -type motif 9 isoform a (LOC517589), mRNA4e-33DV791615, btcn26689 Bt.23653.1.S1_at (1870 bases away) Bt.23653.1.S1_at (1874 bases away)
11539:5976_CL1Contig1-B:rNM_004684Homo sapiens SPARC-like 1 (mast9, hevin) (SPARCL1), mRNANM_001034302Bos taurus similar to SPARC-like protein 1 precursor (High endothelial venule protein) (Hevin) (MAST 9) (MGC127494), mRNA4e-33btcn26685, DV796464, DT810742, btcn26686 Bt.5153.1.S1_at Bt.5153.1.S1_at Bt.5153.1.S1_at Bt.5153.1.S1_at
1153:5876_CL2Contig1-B:rXM_592663PREDICTED: Bos taurus similar to transmembrane protein 17 (LOC514758), mRNA4e-33DV776338.1, btcn26041, btcn26040.1
11540:8452_CL1Contig1-A:fXM_587288PREDICTED: Bos taurus similar to wolframin (LOC510176), partial mRNA4e-33
11541:35444_CL1Contig1-B:fNM_144720Homo sapiens janus kinase and microtubule interacting protein 1 (JAKMIP1), mRNAXM_871540PREDICTED: Bos taurus similar to multiple coiled-coil GABABR1-binding protein, transcript variant 2 (LOC540970), mRNA4e-33btcn22022 Bt.19810.1.A1_at
11542:31033_1574977-A:fNM_004407Homo sapiens dentin matrix acidic phosphoprotein (DMP1), mRNANM_174038Bos taurus dentin matrix acidic phosphoprotein (DMP1), mRNA4e-33btcn18466 Bt.554.1.S1_at
11543:30009_CL1Contig1-B:rNM_080684, NM_080683, NM_006264, NM_080685Homo sapiens protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) (PTPN13), transcript variant 2, mRNANM_174590Bos taurus protein tyrosine phosphatase, non-receptor type 13 (PTPN13), mRNA4e-33btcn49874 Bt.5098.1.S1_at
11544:4743_9597645-A:fNM_197965Homo sapiens solute carrier family 10 (sodium/bile acid cotransporter family), member 6 (SLC10A6), mRNAXM_613388PREDICTED: Bos taurus similar to sodium-dependent organic anion transporter (LOC540841), mRNA4e-33btcn23313 Bt.5098.1.S1_at (8493 bases away)
11545:12459_CL1Contig1-B:rNM_017491, NM_005112Homo sapiens WD repeat domain 1 (WDR1), transcript variant 2, mRNAXM_612553PREDICTED: Bos taurus similar to WD-repeat protein 1 (Actin interacting protein 1) (AIP1) (NORI-1) (LOC533223), mRNA4e-33btcn23727 Bt.1154.1.S1_at
11546:11808_CL1Contig2-B:fXM_871813PREDICTED: Bos taurus hypothetical protein LOC537667, transcript variant 2 (LOC537667), mRNA4e-33
11547:5906_46415010-B:fNM_001034454Bos taurus hypothetical LOC513824 (MGC127281), mRNA4e-33
11548:10061_CL1Contig2-B:rNM_005750 (26277 bases away)Homo sapiens chromosome 4 open reading frame 6 (C4orf6), mRNAbtcn17636.3, CO884045 Bt.12293.1.S1_at Bt.12293.1.S1_at
1154:22969_CL4Contig1-A:fNM_198276 (182617 bases away)Homo sapiens transmembrane protein 17 (TMEM17), mRNAXM_872068PREDICTED: Bos taurus similar to EH domain binding protein 1, transcript variant 2 (LOC613399), mRNA4e-33btcn26043 Bt.19305.1.A1_at (182032 bases away)
11550:983_CL5Contig1-B:fNM_004775Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 (B4GALT6), mRNAXM_602784PREDICTED: Bos taurus similar to Beta-1,4-galactosyltransferase 6 (Beta-1,4-GalTase 6) (Beta4Gal-T6) (b4Gal-T6) (UDP-galactose:beta-N-acetylglucosamine beta-1,4-galactosyltransferase 6) (UDP-Gal:beta-GlcNAc beta-1,4-galactosyltransferase 6) (LOC524460), partial mRNA4e-33btcn52510 Bt.21943.1.S1_at
11551:13491_CL1Contig1-B:rNM_000371Homo sapiens transthyretin (prealbumin, amyloidosis type I) (TTR), mRNANM_173967Bos taurus transthyretin (TTR), mRNA4e-33DV786925, DV784087, DV790854, DV789366, DV786464, DV784425, btcn52511, DV789802 Bt.207.1.A1_at Bt.207.1.A1_at Bt.207.1.A1_at Bt.207.1.A1_at Bt.207.1.A1_at Bt.207.1.A1_at Bt.207.1.A1_at Bt.207.1.A1_at
11552:1777_CL1Contig1-B:fNM_001014809, NM_001313Homo sapiens collapsin response mediator protein 1 (CRMP1), transcript variant 2, mRNAXM_580336PREDICTED: Bos taurus similar to Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin response mediator protein 1) (CRMP-1) (LOC504250), partial mRNA4e-33btcn14499, CR455946 Bt.23485.1.S1_at, Bt.4858.1.S1_at Bt.23485.1.S1_at, Bt.4858.1.S1_at
11553:17535_CL1Contig1-A:rNM_153717Homo sapiens Ellis van Creveld syndrome (EVC), mRNANM_174747Bos taurus Ellis van Creveld syndrome (EVC), mRNA4e-33btcn14497, btcn14496 Bt.8146.1.S1_at Bt.8146.1.S1_at, Bt.20441.1.A1_at
11555:17402_CL1Contig1-B:fXM_865505PREDICTED: Bos taurus similar to Syntaxin-18 (LOC614135), mRNA4e-33
11556:2808_CL1Contig1-A:fNM_018659Homo sapiens cytokine-like 1 (CYTL1), mRNAXM_581416PREDICTED: Bos taurus similar to Cytokine-like protein C17 precursor (LOC505170), mRNA4e-33btcn17944 Bt.2917.1.A1_at (65 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11557:10766_CL1Contig3-B:rNM_002448Homo sapiens msh homeobox homolog 1 (Drosophila) (MSX1), mRNANM_174798Bos taurus msh homeo box homolog 1 (Drosophila) (MSX1), mRNA3e-28btcn17942, CB424787, btcn17943 Bt.1656.1.S1_at Bt.1656.1.S1_at Bt.1656.1.S1_at
1155:2007_CL5Contig1-A:fNM_003038Homo sapiens solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4), mRNAXM_593444PREDICTED: Bos taurus solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4), mRNA4e-33btcn50006 Bt.13712.1.S1_at, Bt.28214.1.S1_at
11561:1482_CL3Contig2-B:fNM_172128, NM_001221, NM_172127, NM_172115Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II delta (CAMK2D), transcript variant 3, mRNAXM_611869PREDICTED: Bos taurus similar to Calcium/calmodulin-dependent protein kinase type II delta chain (CaM-kinase II delta chain) (CaM kinase II delta subunit) (CaMK-II delta subunit) (LOC532713), mRNA4e-33btcn26696, btcn26701 Bt.4901.1.S1_at, Bt.17212.1.A1_at, Bt.16284.1.A1_at Bt.4901.1.S1_at
11563:21348_CL1Contig2-B:fXM_940346, XM_944559, XM_932836, XM_928369, XM_944557, XM_944560, XM_106386PREDICTED: Homo sapiens KIAA1345 protein, transcript variant 1 (KIAA1345), mRNAXM_595408PREDICTED: Bos taurus similar to CG18631-PA (LOC517240), partial mRNA4e-33DN525251, btcn53724, DN522536 Bt.24569.1.A1_at Bt.24569.1.A1_at Bt.24569.1.A1_at
11564:45360_CL282Contig1-B:fXM_872101PREDICTED: Bos taurus similar to C1q and tumor necrosis factor related protein 7, transcript variant 2 (LOC540131), mRNA4e-33
11565:2284_62804277-A:fXM_944544, NM_182485, XM_940329, XM_944543, NM_182646Homo sapiens cytoplasmic polyadenylation element binding protein 2 (CPEB2), transcript variant B, mRNAbtcn53717 Bt.8979.1.A1_at (48406 bases away)
11566:2284_16743765-A:rNM_182485, NM_182646Homo sapiens cytoplasmic polyadenylation element binding protein 2 (CPEB2), transcript variant B, mRNAXM_583432PREDICTED: Bos taurus similar to cytoplasmic polyadenylation element binding protein 2 (LOC538880), partial mRNA4e-33btcn53722 Bt.8979.1.A1_at, Bt.14204.1.A1_at
11567:38776_9734063-A:fNM_000203, NM_213613, NM_022042Homo sapiens iduronidase, alpha-L- (IDUA), mRNAAV603690, DV869280, btcn20755 Bt.27059.1.S1_at (9240 bases away) Bt.27059.1.S1_at Bt.27059.1.S1_at
11568:31708_CL1Contig1-A:rNM_032326Homo sapiens hypothetical protein MGC4618 (MGC4618), mRNAXM_590981PREDICTED: Bos taurus hypothetical LOC513317 (LOC513317), mRNA4e-33btcn20751 Bt.21307.1.S1_at
11569:1185_CL1Contig1-B:rNM_005255Homo sapiens cyclin G associated kinase (GAK), mRNAXM_588603PREDICTED: Bos taurus similar to Cyclin G-associated kinase, transcript variant 2 (LOC511296), mRNA4e-33btcn20750, btcn20749 Bt.26694.1.S1_at, Bt.13859.1.S1_at Bt.26694.1.S1_at, Bt.13859.1.S1_at, Bt.17911.2.S1_a_at
1156:5870_CL1Contig3-B:fNM_019002Homo sapiens Ewing's tumor-associated antigen 1 (ETAA1), mRNAXM_614588PREDICTED: Bos taurus ETAA16 protein (ETAA16), mRNA4e-33btcn18355, btcn18353, btcn18351 Bt.8128.1.S1_at Bt.8128.1.S1_at, Bt.20698.1.A1_at Bt.8128.1.S1_at, Bt.20698.1.A1_at
11570:20981_CL2Contig1-A:fNM_001024518Bos taurus GPI7 protein (GPI7), mRNA4e-33
11571:115_162824-A:fNM_000283Homo sapiens phosphodiesterase 6B, cGMP-specific, rod, beta (congenital stationary night blindness 3, autosomal dominant) (PDE6B), mRNANM_174418Bos taurus phosphodiesterase, cyclic GMP ( rod receptor), beta polypeptide (PDE6B), mRNA4e-33btcn34412 Bt.55.1.S1_at
11572:9564_CL1Contig3-B:fNM_000283 (4569 bases away)Homo sapiens phosphodiesterase 6B, cGMP-specific, rod, beta (congenital stationary night blindness 3, autosomal dominant) (PDE6B), mRNANM_176639Bos taurus ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e (ATP5I), mRNA4e-33btcn34403, BF599676, btcn49085, btcn34406, btcn34401 Bt.378.1.S1_at Bt.378.1.S1_at Bt.378.1.S1_at Bt.378.1.S1_at Bt.378.1.S1_at
11573:628_51817635-B:fNM_032219 (1207 bases away)Homo sapiens major facilitator superfamily domain containing 7 (MFSD7), mRNAXM_867649PREDICTED: Bos taurus similar to Superfast myosin regulatory light chain 2 (MyLC-2) (MYLC2) (Myosin regulatory light chain 5) (LOC615759), mRNA4e-33btcn34402, DV813604, btcn34404 Bt.24708.1.S1_at Bt.24708.1.S1_at Bt.24708.1.S1_at
11574:16106_CL1Contig1-B:rNM_032219Homo sapiens major facilitator superfamily domain containing 7 (MFSD7), mRNAXM_588393PREDICTED: Bos taurus similar to B0416.5b, transcript variant 4 (LOC511117), mRNA4e-33DT809350, btcn34404 Bt.24708.1.S1_at (968 bases away) Bt.24708.1.S1_at
11575:791_CL2Contig1-A:rNM_006315Homo sapiens polycomb group ring finger 3 (PCGF3), mRNAXM_867912PREDICTED: Bos taurus similar to ring finger protein 3 (LOC615967), mRNA4e-33btcn34407 Bt.109.1.S1_at
11576:43863_CL8Contig1-B:fNM_174318Bos taurus fibroblast growth factor receptor 3 (FGFR3), mRNA4e-27
11577:6123_CL1Contig1-B:rNM_012318Homo sapiens leucine zipper-EF-hand containing transmembrane protein 1 (LETM1), mRNAXM_590989PREDICTED: Bos taurus similar to Leucine zipper-EF-hand containing transmembrane protein 1, mitochondrial precursor (LOC513324), mRNA4e-33DT826503, btcn19705 Bt.27057.1.A1_at Bt.27057.1.A1_at, Bt.5674.1.S1_at
11579:43_CL1Contig3-B:rNM_001328, NM_001012614Homo sapiens C-terminal binding protein 1 (CTBP1), transcript variant 1, mRNAXM_590771PREDICTED: Bos taurus similar to C-terminal binding protein 1 isoform 2 (LOC513131), mRNA4e-33BI976751, CB453795, btcn46104, DT831508, DT842664 Bt.1780.1.S1_at, Bt.1780.2.A1_at Bt.1780.1.S1_at, Bt.1780.2.A1_at Bt.1780.1.S1_at, Bt.1780.2.A1_at Bt.1780.1.S1_at Bt.1780.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1157:1454_CL1Contig2-B:r
11580:18945_CL1Contig1-B:fNM_012445Homo sapiens spondin 2, extracellular matrix protein (SPON2), mRNAXM_591597PREDICTED: Bos taurus similar to F-spondin (LOC513844), mRNA4e-33btcn46107, btcn46108 Bt.18280.1.S1_at Bt.18280.1.S1_at
11581:4658_28151960-A:fNM_194439 (4344 bases away)Homo sapiens hypothetical protein LOC285498 (LOC285498), mRNACB165835 Bt.18280.1.S1_at (40233 bases away)
11582:5459_CL1Contig1-B:rNM_002938 (13932 bases away)Homo sapiens ring finger protein 4 (RNF4), mRNAXM_869192PREDICTED: Bos taurus similar to RING finger protein 4 (LOC617018), mRNA4e-33btcn12388, btcn12387, btcn12389 Bt.12878.1.S1_at Bt.12878.1.S1_at (1421 bases away) Bt.12878.1.S1_at, Bt.9067.1.S1_at
11584:14464_CL1Contig3-B:fNM_003023Homo sapiens SH3-domain binding protein 2 (SH3BP2), mRNAXM_869583PREDICTED: Bos taurus similar to SH3-domain binding protein 2 (LOC617344), mRNA4e-33btcn12377, btcn12378 Bt.21789.1.S1_at (282 bases away) Bt.21789.1.S1_at
11585:10890_CL2Contig1-B:fNM_001119, NM_014190, NM_014189, NM_176801Homo sapiens adducin 1 (alpha) (ADD1), transcript variant 1, mRNAXM_611206PREDICTED: Bos taurus similar to Alpha adducin (Erythrocyte adducin alpha subunit) (LOC507193), mRNA4e-33btcn12379, btcn12380, btcn12383 Bt.23518.1.S1_at, Bt.23518.2.S1_at, Bt.17675.1.A1_at Bt.23518.1.S1_at (999 bases away) Bt.23518.1.S1_at (997 bases away)
11586:56_CL1Contig1-B:rNM_001120Homo sapiens tetracycline transporter-like protein (TETRAN), mRNAXM_873704PREDICTED: Bos taurus similar to tetracycline transporter-like protein, transcript variant 3 (LOC507194), mRNA4e-33btcn12379, btcn12381, DT894865 Bt.23518.1.S1_at, Bt.23518.2.S1_at, Bt.17675.1.A1_at Bt.23518.2.S1_at (189 bases away) Bt.23518.1.S1_at, Bt.23518.2.S1_at
11587:7897_10763375-A:fNM_003703Homo sapiens chromosome 4 open reading frame 9 (C4orf9), mRNAXM_595158PREDICTED: Bos taurus similar to CG5824-PA, transcript variant 6 (LOC516995), mRNA1e-30btcn12386, btcn12385, btcn12384 Bt.21833.3.S1_a_at Bt.21833.3.S1_a_at Bt.21833.3.S1_a_at, Bt.21833.2.S1_at
11588:36812_CL3Contig1-B:fNM_182982, NM_001004056, NM_001004057Homo sapiens G protein-coupled receptor kinase 4 (GRK4), transcript variant 1, mRNAXM_590012PREDICTED: Bos taurus similar to G protein-coupled receptor kinase 4 isoform beta (LOC512489), mRNA4e-33BI898450, BF046224, btcn12393, btcn12395 Bt.2996.2.S1_a_at Bt.2996.2.S1_a_at Bt.2996.2.S1_a_at, Bt.2996.1.S1_at Bt.2996.2.S1_a_at
11589:705_CL1Contig1-B:fXM_591214PREDICTED: Bos taurus similar to SH3 domain and tetratricopeptide repeats 1 (LOC513522), mRNA4e-33
1158:14773_CL1Contig2-A:rXM_612642PREDICTED: Bos taurus similar to RAB1, member RAS oncogene family, transcript variant 1 (LOC540685), mRNA4e-33
11590:3648_CL4Contig1-A:fXM_601153PREDICTED: Bos taurus similar to Probable serine protease HTRA3 precursor (High-temperature requirement factor A3) (Pregnancy-related serine protease) (LOC522865), mRNA4e-33
11591:11590_CL1Contig3-B:fNM_003501 (5642 bases away)Homo sapiens acyl-Coenzyme A oxidase 3, pristanoyl (ACOX3), mRNAXM_587157PREDICTED: Bos taurus similar to Acyl-coenzyme A oxidase 3, peroxisomal (Pristanoyl-CoA oxidase) (LOC510065), mRNA4e-33btcn29178 Bt.9711.1.S1_at
11592:13032_CL1Contig1-A:fNM_014743 (108498 bases away)Homo sapiens KIAA0232 gene product (KIAA0232), mRNAXM_596737PREDICTED: Bos taurus similar to Cappuccino protein homolog (LOC518544), mRNA4e-33btcn6635 Bt.28184.1.S1_at
11593:19932_CL1Contig2-B:rNM_002337 (1655 bases away)Homo sapiens low density lipoprotein receptor-related protein associated protein 1 (LRPAP1), mRNAXM_589404PREDICTED: Bos taurus similar to Alpha-2-macroglobulin receptor-associated protein precursor (Alpha-2-MRAP) (Low density lipoprotein receptor-related protein-associated protein 1) (RAP) (GP330-binding 45 kDa protein) (LOC511975), mRNA2e-29DV783823, btcn52345, btcn52346 Bt.2982.1.S1_at Bt.2982.1.S1_at Bt.2982.1.S1_at
11594:34906_CL1Contig1-A:fNM_005596Homo sapiens nuclear factor I/B (NFIB), mRNAbtcn21009 Bt.21763.1.A1_at (2877 bases away)
11595:38940_CL1Contig1-A:rNM_005596Homo sapiens nuclear factor I/B (NFIB), mRNAbtcn21012 Bt.21763.1.A1_at (1217 bases away)
11596:45506_CL4Contig2-B:rNM_005596Homo sapiens nuclear factor I/B (NFIB), mRNAXM_874841PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 10 (LOC538474), mRNA4e-33CR551264.1, CK833359, btcn21003, btcn21002 Bt.21763.2.S1_at (408 bases away) Bt.21763.2.S1_at (512 bases away) Bt.21763.3.S1_at Bt.21763.1.A1_at, Bt.21763.2.S1_at, Bt.21763.3.S1_at
11597:29951_CL1Contig1-B:fNM_018569Homo sapiens chromosome 4 open reading frame 16 (C4orf16), mRNAXM_613138PREDICTED: Bos taurus hypothetical LOC533664, transcript variant 1 (LOC533664), mRNA4e-33btcn20476, btcn20473, btcn20475, btcn20474 Bt.27322.2.A1_at Bt.27322.2.A1_at, Bt.29044.1.S1_at, Bt.27322.1.S1_at Bt.27322.2.A1_at (322 bases away) Bt.27322.2.A1_at, Bt.27322.1.S1_at
11598:3681_CL1Contig1-A:rNM_052864Homo sapiens TRAF-interacting protein with a forkhead-associated domain (TIFA), mRNAbtcn20473 Bt.27322.2.A1_at, Bt.29044.1.S1_at, Bt.27322.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11599:45983_CL2Contig1-A:rNM_016648, NM_015454Homo sapiens La ribonucleoprotein domain family, member 7 (LARP7), transcript variant 2, mRNAXM_581278PREDICTED: Bos taurus similar to CG12058-PA (LOC505053), mRNA4e-33btcn20472, btcn20477, CB420923 Bt.18573.1.S1_at, Bt.25379.1.A1_at Bt.18573.1.S1_at Bt.18573.1.S1_at
1159:6981_CL1Contig1-B:rNM_005917Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNANM_001034628Bos taurus similar to Malate dehydrogenase, cytoplasmic (MGC127061), mRNA4e-33btcn12571, DV797623, btcn12570, DV798095, btcn12569, DV790685, DV777321, DV795008 Bt.5345.1.S1_at Bt.5345.1.S1_at Bt.5345.1.S1_at Bt.5345.1.S1_at Bt.5345.1.S1_at Bt.5345.1.S1_at Bt.5345.1.S1_at Bt.5345.1.S1_at
115:7090_CL1Contig2-B:fNM_017644Homo sapiens kelch-like 24 (Drosophila) (KLHL24), mRNAXM_612941PREDICTED: Bos taurus similar to DRE1 protein, transcript variant 1 (LOC533510), mRNA4e-33btcn862, btcn861, btcn860 Bt.3191.1.A1_at Bt.3191.1.A1_at Bt.3191.1.A1_at
11601:9986_CL1Contig2-B:rNM_025144 (449 bases away)Homo sapiens alpha-kinase 1 (ALPK1), mRNAXM_602698PREDICTED: Bos taurus similar to alpha-kinase 1 (LOC524375), mRNA4e-33btcn20483 Bt.25105.2.A1_at, Bt.25105.1.S1_at
11602:43011_CL1Contig2-B:rXM_588126PREDICTED: Bos taurus similar to prematurely terminated mRNA decay factor-like (LOC539572), mRNA4e-33
11603:45983_CL1Contig2-B:rNM_016648, NM_015454Homo sapiens La ribonucleoprotein domain family, member 7 (LARP7), transcript variant 2, mRNAXM_583631PREDICTED: Bos taurus similar to CG12058-PA (LOC507077), mRNA4e-33btcn20472, DV905496 Bt.18573.1.S1_at, Bt.25379.1.A1_at Bt.25379.1.A1_at
11604:36983_CL3Contig1-A:fNM_001290Homo sapiens LIM domain binding 2 (LDB2), mRNAXM_870309PREDICTED: Bos taurus similar to LIM domain binding 2 (LOC617976), partial mRNA4e-33btcn51316 Bt.11446.1.A1_at
11605:7488_CL1Contig1-A:rNM_001035344Bos taurus Mof4 family associated protein 1 (MRFAP1), mRNA4e-33
11606:15798_CL1Contig1-B:fNM_014743 (145382 bases away)Homo sapiens KIAA0232 gene product (KIAA0232), mRNAXM_870412PREDICTED: Bos taurus similar to Dihydropteridine reductase (HDHPR) (Quinoid dihydropteridine reductase) (LOC618084), mRNA4e-33btcn34802, btcn17394.1 Bt.1735.1.S1_at Bt.1735.1.S1_at
11608:1821_10122367-A:fNM_198595, NM_021638Homo sapiens actin filament associated protein (AFAP), transcript variant 1, mRNAXM_613646PREDICTED: Bos taurus similar to actin filament associated protein (LOC534032), mRNA4e-33btcn34804 Bt.22132.1.S1_at (7173 bases away)
11609:12132_CL1Contig1-B:rNM_020777Homo sapiens sortilin-related VPS10 domain containing receptor 2 (SORCS2), mRNAXM_870586PREDICTED: Bos taurus similar to VPS10 domain receptor protein SORCS 2 (LOC618257), mRNA4e-33btcn34816 Bt.27238.1.A1_at
1160:5523_CL2Contig1-B:fNM_173642Homo sapiens family with sequence similarity 80, member A (FAM80A), mRNAXM_583916PREDICTED: Bos taurus similar to family with sequence similarity 80, member A (LOC507323), mRNA4e-33btcn37245 Bt.27422.1.A1_at (19631 bases away)
11610:12635_CL1Contig1-B:fNM_020773Homo sapiens TBC1 domain family, member 14 (TBC1D14), mRNAXM_870617PREDICTED: Bos taurus similar to TBC1 domain family, member 14 (LOC618286), mRNA4e-33btcn34801 Bt.28500.1.S1_at, Bt.21415.1.S1_at
11611:45360_6720145-B:rNM_198721, NM_032518Homo sapiens collagen, type XXV, alpha 1 (COL25A1), transcript variant 2, mRNAXM_867526PREDICTED: Bos taurus similar to collagen, type XXV, alpha 1 isoform 1 (LOC615661), partial mRNA4e-33btcn29074 Bt.13287.1.S1_at (195196 bases away)
11613:36493_CL2Contig1-B:fNM_031279 (3061 bases away)Homo sapiens alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), mRNANM_001015605Bos taurus alanine-glyoxylate aminotransferase 2-like 1 (AGXT2L1), mRNA4e-33DV794217, btcn29071 Bt.13287.1.S1_at Bt.13287.1.S1_at
11614:7119_CL2Contig1-A:fNM_145303, XM_940087, NM_021227, XM_929503Homo sapiens DC2 protein (DC2), mRNAbtcn29062, CB425126, btcn29064, btcn29063 Bt.3114.1.A1_at Bt.3114.1.A1_at (2702 bases away) Bt.3114.1.A1_at Bt.3114.1.A1_at (2719 bases away)
11615:9529_CL1Contig1-A:fNM_033625 (168 bases away)Homo sapiens ribosomal protein L34 (RPL34), transcript variant 2, mRNAXM_867624PREDICTED: Bos taurus similar to ribosomal protein L34 (LOC505603), mRNA3e-31btcn10363.1, btcn29065.1 Bt.23548.1.S1_at Bt.23548.1.S1_at
11616:17344_CL1Contig1-A:fNM_017628Homo sapiens KIAA1546 (KIAA1546), mRNAXM_580587PREDICTED: Bos taurus similar to CG2083-PA (LOC538481), mRNA4e-33btcn38133 Bt.11240.1.A1_at, Bt.11240.2.S1_at
11617:421_51809245-B:fNM_001034191, NM_176867, NM_006903, NM_176869, NM_176866Homo sapiens pyrophosphatase (inorganic) 2 (PPA2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNAXM_867727PREDICTED: Bos taurus similar to inorganic pyrophosphatase 2 isoform 2 (LOC615820), mRNA7e-32AW479490, btcn38131, btcn38132 Bt.6239.1.S1_at Bt.6239.1.S1_at Bt.6239.1.S1_at
1161:24844_CL2Contig1-A:rNM_032257Homo sapiens zinc finger, MYND-type containing 12 (ZMYND12), mRNANM_001038087Bos taurus zinc finger, MYND-type containing 12 (ZMYND12), mRNA4e-33btcn37239, btcn37238, btcn37237 Bt.27422.1.A1_at Bt.27422.1.A1_at Bt.27422.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11621:45360_CL1421Contig1-A:rNM_005443Homo sapiens 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (PAPSS1), mRNAbtcn27228 Bt.11219.1.A1_at
11623:14826_28152998-A:rNM_005443 (23518 bases away)Homo sapiens 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (PAPSS1), mRNACB166873 Bt.11219.1.A1_at (135639 bases away)
11624:17403_61752747-A:fXM_371534, XM_938307, NM_139173Homo sapiens CG10806-like (LOC150159), mRNAXM_586609PREDICTED: Bos taurus similar to CG10806-PB, isoform B (LOC509608), mRNA4e-33btcn45756 Bt.28419.1.S1_at (45636 bases away)
11625:4152_CL1Contig1-B:fNM_001008388Homo sapiens zinc finger, CDGSH-type domain 2 (ZCD2), mRNAbtcn45751 Bt.28419.1.S1_at
11626:45360_CL64Contig1-A:rNM_181890, NM_181893, NM_181891, NM_181892, NM_181887, NM_181886, NM_003340, NM_181889, NM_181888Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (UBE2D3), transcript variant 1, mRNAXM_876087PREDICTED: Bos taurus phosphoarginine phosphatase, transcript variant 6 (LOC326583), mRNA4e-33btcn45743, btcn45741, DV797920, DT842539, DY083932, DV782359, DV793281, DV791403, btcn45749, DV776612, DT836037, btcn45750 Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.26335.1.A1_at Bt.25135.1.A1_at (1409 bases away) Bt.26335.1.A1_at Bt.26335.1.A1_at
11627:27032_CL2Contig1-B:fNM_174387Bos taurus mannosidase, beta A, lysosomal (MANBA), mRNA4e-33
11628:12978_CL1Contig1-B:r
11629:3959_CL2Contig1-B:fNM_153427, NM_153426, NM_000325Homo sapiens paired-like homeodomain transcription factor 2 (PITX2), transcript variant 3, mRNAXM_583206PREDICTED: Bos taurus similar to paired-like homeodomain transcription factor 2 isoform c, transcript variant 1 (LOC506721), mRNA4e-33btcn21814 Bt.21215.2.S1_at, Bt.21215.1.A1_at
1162:18505_CL1Contig1-B:rNM_024664Homo sapiens phosphopantothenoylcysteine synthetase (PPCS), mRNAXM_586257PREDICTED: Bos taurus similar to phosphopantothenoylcysteine synthetase, transcript variant 1 (LOC539294), mRNA4e-33btcn37226, DV784463, btcn37227 Bt.13503.1.S1_at (170 bases away) Bt.13503.1.S1_at Bt.13503.1.S1_at
11630:13080_CL2Contig2-B:rNM_001038027Bos taurus glutamyl aminopeptidase (aminopeptidase A) (ENPEP), mRNA4e-33
11631:44862_CL9Contig1-A:f
11632:7936_CL9Contig1-A:rNM_020139Homo sapiens 3-hydroxybutyrate dehydrogenase, type 2 (BDH2), mRNANM_001034488Bos taurus 3-hydroxybutyrate dehydrogenase, type 2 (BDH2), mRNA4e-33DV789982, btcn29224, btcn29222, DT820115 Bt.1792.1.S1_at Bt.1792.1.S1_at Bt.1792.1.S1_at (641 bases away) Bt.1792.1.S1_at
11633:16169_CL1Contig2-B:fNM_138386Homo sapiens hypothetical protein BC008207 (LOC92345), mRNAXM_591989PREDICTED: Bos taurus similar to CG10341-PA (LOC514182), partial mRNA4e-33btcn32092, btcn32091, CK949061 Bt.20735.1.S1_at Bt.16283.1.A1_at, Bt.23295.1.S1_at, Bt.16283.2.S1_at, Bt.20735.2.A1_at, Bt.20735.1.S1_at, Bt.17199.1.A1_at Bt.20735.1.S1_at
11634:38217_CL1Contig1-A:rNM_016242Homo sapiens endomucin (EMCN), mRNAXM_868372PREDICTED: Bos taurus similar to endomucin (LOC616367), partial mRNA4e-33btcn3586, btcn3587 Bt.5003.2.S1_a_at, Bt.5003.1.S1_at Bt.5003.2.S1_a_at, Bt.5003.1.S1_at
11635:2835_46416347-A:fNM_145244Homo sapiens DNA-damage-inducible transcript 4-like (DDIT4L), mRNAXM_588133PREDICTED: Bos taurus similar to DNA-damage-inducible transcript 4-like (LOC510906), partial mRNA4e-33btcn26281 Bt.22199.1.S1_at (1442 bases away)
11636:30395_CL1Contig1-A:rXM_373030, XM_939505PREDICTED: Homo sapiens hypothetical protein LOC285556 (LOC285556), mRNAbtcn53924 Bt.24740.1.A1_at (64 bases away)
11638:30395_18533109-A:fXM_373030, XM_939505PREDICTED: Homo sapiens hypothetical protein LOC285556 (LOC285556), mRNAbtcn53923 Bt.24740.1.A1_at
11640:30395_10240112-A:fXM_373030, XM_939505PREDICTED: Homo sapiens hypothetical protein LOC285556 (LOC285556), mRNAbtcn53926 Bt.24740.1.A1_at (1199 bases away)
11642:1097_CL1Contig1-A:fNM_002106Homo sapiens H2A histone family, member Z (H2AFZ), mRNANM_174809Bos taurus H2A histone family, member Z (H2AFZ), mRNA4e-33btcn43638, DV785801, CN793363, DV798862, btcn43637, btcn43636, CB220631 Bt.2515.1.S1_at Bt.2515.1.S1_at Bt.2515.1.S1_at Bt.2515.1.S1_at Bt.2515.1.S1_at Bt.2515.1.S1_at Bt.2515.1.S1_at
11643:5200_CL2Contig1-B:fNM_024920, NM_001031723Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 14 (DNAJB14), transcript variant 2, mRNAXM_876579PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily B, member 14 isoform 1, transcript variant 2 (LOC538849), mRNA4e-33CR454488, btcn43640 Bt.17608.1.A1_at Bt.17608.1.A1_at (3788 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11644:10903_CL1Contig1-A:rNM_014395 (8653 bases away)Homo sapiens dual adaptor of phosphotyrosine and 3-phosphoinositides (DAPP1), mRNAXM_612466PREDICTED: Bos taurus similar to mitogen-activated protein kinase kinase 1 interacting protein 1 (LOC533155), mRNA4e-33DV796036, BE899810, DV835471, btcn43644 Bt.2404.1.S1_at Bt.2404.1.S1_at (3643 bases away) Bt.2404.1.S1_at Bt.2404.1.S1_at
11646:2228_47689738-A:fNM_014395Homo sapiens dual adaptor of phosphotyrosine and 3-phosphoinositides (DAPP1), mRNAXM_612467PREDICTED: Bos taurus similar to Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide (hDAPP1) (B cell adapter molecule of 32 kDa) (B lymphocyte adapter protein Bam32) (LOC533156), mRNA4e-33btcn43633, btcn43635 Bt.24335.1.S1_at (13033 bases away) Bt.24335.1.S1_at (6463 bases away)
11647:9900_56137734-A:rNM_001035477Bos taurus similar to RNA (guanine-9-) methyltransferase domain containing 2 (MGC128771), mRNA4e-33
11648:2546_CL1Contig1-B:fNM_174666Bos taurus RAP1, GTP-GDP dissociation stimulator 1 (RAP1GDS1), mRNA4e-33
11649:22_CL2Contig2-B:rNM_005723Homo sapiens tetraspanin 5 (TSPAN5), mRNAXM_581898PREDICTED: Bos taurus similar to transmembrane 4 superfamily member 9 (LOC538668), mRNA4e-33btcn38112, DV871443 Bt.22126.1.S1_at Bt.22126.1.S1_at
1164:45360_CL54Contig3-B:fNM_014409 (28155 bases away)Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa (TAF5L), transcript variant 1, mRNAXM_873570PREDICTED: Bos taurus similar to peptidyl prolyl isomerase H, transcript variant 4 (LOC513428), mRNA4e-33btcn37232, btcn37233, btcn37230, btcn37231 Bt.18503.1.A1_at, Bt.6641.1.S1_at Bt.18503.1.A1_at, Bt.6641.1.S1_at Bt.18503.1.A1_at, Bt.6641.1.S1_at Bt.18503.1.A1_at, Bt.6641.1.S1_at
11650:14002_29202422-A:fNM_174952 (212036 bases away)Homo sapiens hypothetical protein MGC46496 (MGC46496), mRNAXM_869756PREDICTED: Bos taurus similar to CG9003-PA (LOC524465), mRNA3e-28DT836908.1, CB428406.1 Bt.4697.1.S1_at (811386 bases away) Bt.4697.1.S1_at (809575 bases away)
11653:32433_CL2Contig1-B:rNM_003728Homo sapiens unc-5 homolog C (C. elegans) (UNC5C), mRNAXM_612601PREDICTED: Bos taurus similar to Netrin receptor UNC5C precursor (Unc-5 homolog C) (Unc-5 homolog 3) (Rostral cerebellar malformation protein) (LOC533256), mRNA1e-30btcn21419 Bt.27983.1.A1_at (30405 bases away)
11654:3189_CL3Contig1-B:fNM_001203Homo sapiens bone morphogenetic protein receptor, type IB (BMPR1B), mRNAXM_612088PREDICTED: Bos taurus bone morphogenetic protein receptor IB (bmprib), partial mRNA1e-30btcn45252, CV982474 Bt.27983.1.A1_at, Bt.27983.1.S1_at Bt.27983.1.A1_at (10833 bases away)
11655:6144_CL3Contig1-B:rNM_001011513, NM_001011515, NM_001011516, NM_006457Homo sapiens PDZ and LIM domain 5 (PDLIM5), transcript variant 1, mRNAXM_872099PREDICTED: Bos taurus PDZ and LIM domain 5, transcript variant 8 (PDLIM5), mRNA4e-33DV793398, DV791783, DV799030, btcn13907, btcn13909, DV797103, btcn13905, btcn13913 Bt.17713.1.S1_at (83196 bases away) Bt.17713.1.S1_at (83379 bases away) Bt.17713.1.S1_at (83065 bases away) Bt.17713.1.S1_at (82999 bases away) Bt.17713.1.S1_at (82492 bases away) Bt.17713.1.S1_at (83515 bases away) Bt.17713.1.S1_at, Bt.9903.1.S1_at, Bt.17713.2.A1_s_at Bt.17713.1.S1_at (83155 bases away)
11656:7175_16997643-A:fNM_020159Homo sapiens SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 (SMARCAD1), mRNAbtcn13918 Bt.25978.1.A1_at
11657:12952_42732968-A:rNM_005687 (108688 bases away)Homo sapiens phenylalanine-tRNA synthetase-like, beta subunit (FARSLB), mRNAbtcn1407 Bt.27148.1.S1_at (90786 bases away)
11658:14746_CL1Contig1-B:rNM_004967 (11058 bases away)Homo sapiens integrin-binding sialoprotein (bone sialoprotein, bone sialoprotein II) (IBSP), mRNAbtcn39877 Bt.568.1.S1_at
11659:21399_CL1Contig1-B:rNM_000582, NM_001040058, NM_001040060Homo sapiens secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1) (SPP1), transcript variant 2, mRNANM_174187Bos taurus secreted phosphoprotein 1 (SPP1), mRNA4e-33btcn39870, DV777216, DV778470, btcn39869, DV778266, CB533905 Bt.2632.1.S1_at Bt.2632.1.S1_at Bt.2632.1.S1_at Bt.2632.1.S1_at Bt.2632.1.S1_at Bt.2632.1.S1_at
1165:7183_CL2Contig1-A:rNM_006516 (4931 bases away)Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1), mRNAbtcn37246 Bt.2954.1.S1_at (898 bases away)
11660:4240_47689980-B:fXM_608864PREDICTED: Bos taurus similar to polycystin 2 (LOC530393), mRNA4e-33
11662:32907_CL1Contig1-A:rNM_198281Homo sapiens G protein-regulated inducer of neurite outgrowth 3 (GRIN3), mRNAXM_596177PREDICTED: Bos taurus similar to K06A9.1b (LOC517995), mRNA4e-33btcn21723 Bt.17670.1.A1_at
11663:45360_CL279Contig1-A:fXM_610945PREDICTED: Bos taurus similar to tigger transposable element derived 2 (LOC532427), mRNA4e-33
11665:936_CL1Contig1-B:rNM_004181Homo sapiens ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) (UCHL1), mRNAXM_592241PREDICTED: Bos taurus similar to ubiquitin carboxy-terminal hydrolase L1, transcript variant 1 (LOC514394), mRNA1e-30btcn9565, btcn9560, btcn9563, btcn9561, DY085006, btcn9564 Bt.5408.1.A1_at Bt.5408.1.A1_at Bt.5408.1.A1_at (1783 bases away) Bt.5408.1.A1_at Bt.5408.1.A1_at Bt.5408.1.A1_at
11666:12477_CL18Contig2-B:rNM_152542Homo sapiens protein phosphatase 1K (PP2C domain containing) (PPM1K), mRNAXM_593225PREDICTED: Bos taurus similar to protein phosphatase 1K (PP2C domain containing), transcript variant 1 (LOC540329), mRNA4e-33btcn9557, btcn9559, btcn9558 Bt.21997.2.A1_at Bt.28238.1.A1_at, Bt.18634.2.S1_at, Bt.21997.2.A1_at, Bt.18634.1.A1_at, Bt.21997.1.S1_at Bt.21997.2.A1_at, Bt.21997.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11667:45360_CL1327Contig1-B:fNM_006344, NM_182906Homo sapiens C-type lectin domain family 10, member A (CLEC10A), transcript variant 2, mRNAXM_592745PREDICTED: Bos taurus similar to C-type lectin, superfamily member 14 isoform 2 (LOC514833), partial mRNA3e-28btcn7962 Bt.6369.1.A1_a_at (8549 bases away)
11668:30090_CL2Contig1-B:fNM_147182, NM_147181, NM_001035004, NM_001035003, NM_147183, NM_025221Homo sapiens Kv channel interacting protein 4 (KCNIP4), transcript variant 1, mRNAXM_865764PREDICTED: Bos taurus similar to potassium channel interacting protein 4 (LOC614315), mRNA4e-33btcn39888 Bt.29670.1.A1_at (947 bases away)
11669:23736_CL1Contig1-A:fNM_145048Homo sapiens chromosome 4 open reading frame 28 (C4orf28), mRNAXM_605708PREDICTED: Bos taurus similar to CG15120-PA (LOC527318), partial mRNA4e-33DN516449, btcn44364 Bt.29670.1.A1_at Bt.29670.1.A1_at (397 bases away)
1166:5691_CL1Contig1-B:rNM_006516Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1), mRNANM_174602Bos taurus solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1), mRNA4e-33btcn37234 Bt.4646.1.S1_at
11670:35840_CL8Contig1-B:fNM_017912Homo sapiens hect domain and RLD 6 (HERC6), mRNAXM_591235PREDICTED: Bos taurus similar to hect domain and RLD 6 isoform d (LOC513540), partial mRNA4e-33btcn11016 Bt.22058.1.A1_at (26090 bases away)
11671:13401_CL1Contig2-A:rNM_176824, NM_018190Homo sapiens Bardet-Biedl syndrome 7 (BBS7), transcript variant 2, mRNAXM_609279PREDICTED: Bos taurus similar to Bardet-Biedl syndrome 7 protein isoform a (LOC530801), partial mRNA4e-33btcn43794 Bt.20730.1.A1_at, Bt.16550.2.S1_at, Bt.16550.1.A1_at
11672:5121_CL3Contig1-B:rNM_001034194 (965 bases away)Homo sapiens exosome component 9 (EXOSC9), transcript variant 1, mRNAXM_873403PREDICTED: Bos taurus cyclin A2, transcript variant 3 (CCNA2), mRNA4e-33btcn43792, btcn43793 Bt.2551.1.S1_at (23 bases away) Bt.2551.1.S1_at, Bt.12557.1.S1_at
11673:5935_CL1Contig2-B:fNM_001034194, NM_005033Homo sapiens exosome component 9 (EXOSC9), transcript variant 2, mRNANM_001035053Bos taurus similar to exosome component 9 (MGC128968), mRNA4e-33btcn43793, btcn43791, btcn43790 Bt.2551.1.S1_at, Bt.12557.1.S1_at Bt.12557.1.S1_at Bt.2551.1.S1_at, Bt.12557.1.S1_at
11674:45360_CL1Contig51-B:rNM_001154Homo sapiens annexin A5 (ANXA5), mRNAXM_866062PREDICTED: Bos taurus similar to Annexin A5 (Annexin V) (Lipocortin V) (Endonexin II) (Calphobindin I) (CBP-I) (Placental anticoagulant protein I) (PAP-I) (PP4) (Thromboplastin inhibitor) (Vascular anticoagulant-alpha) (VAC-alpha) (Anchorin CII) (LOC614524), mRNA1e-30AJ818255.1 Bt.25044.1.S1_at (178079 bases away)
11675:5606_CL1Contig1-B:fNM_001015045, NM_014883Homo sapiens family with sequence similarity 13, member A1 (FAM13A1), transcript variant 1, mRNANM_174692Bos taurus family with sequence similarity 13, member A1 (FAM13A1), mRNA1e-30CN791415, btcn36386 Bt.28644.1.A1_at (46019 bases away) Bt.12533.1.S1_at, Bt.28644.1.A1_at
11676:34329_CL1Contig1-A:rNM_153757, NM_014606Homo sapiens hect domain and RLD 3 (HERC3), mRNAXM_585294PREDICTED: Bos taurus similar to nucleosome assembly protein 1-like 5 (LOC508508), mRNA4e-33btcn36381, btcn36380 Bt.24901.2.A1_at, Bt.24901.1.A1_at Bt.24901.2.A1_at, Bt.24901.1.A1_at
11677:10766_CL2Contig1-B:fNM_002449, NR_002307Homo sapiens msh homeobox homolog 2 (Drosophila) pseudogene (MSX2P) on chromosome 17XM_592489PREDICTED: Bos taurus similar to msh homeo box homolog 2, transcript variant 1 (LOC540230), mRNA1e-30btcn36390 Bt.26616.1.S1_at (283946 bases away)
11678:1742_9752495-A:fNM_004787Homo sapiens slit homolog 2 (Drosophila) (SLIT2), mRNAAV616825 Bt.26192.1.A1_at (367954 bases away)
11679:1742_CL3Contig1-B:fNM_004787Homo sapiens slit homolog 2 (Drosophila) (SLIT2), mRNAXM_613831PREDICTED: Bos taurus similar to Slit homolog 2 protein precursor (Slit-2) (LOC534164), partial mRNA4e-33btcn3415 Bt.26192.1.A1_at (8466 bases away)
1167:33009_CL1Contig2-B:rNM_001005739, NM_016516Homo sapiens vacuolar protein sorting 54 (S. cerevisiae) (VPS54), transcript variant 1, mRNAbtcn6052, btcn6053, btcn6049 Bt.3567.1.S1_at (1397 bases away) Bt.3567.1.S1_at (1395 bases away) Bt.3567.1.S1_at (444 bases away)
11680:30042_58065470-A:fNM_020973 (13 bases away)Homo sapiens glucosidase, beta, acid 3 (cytosolic) (GBA3), mRNAXM_588423PREDICTED: Bos taurus similar to cytosolic beta-glucosidase (LOC539625), partial mRNA4e-33btcn39957, btcn50353.124 Bt.6298.1.S1_at (347523 bases away) Bt.3885.3.S1_at (184344 bases away)
11681:12628_18529719-A:fNM_013261Homo sapiens peroxisome proliferative activated receptor, gamma, coactivator 1, alpha (PPARGC1A), mRNANM_177945Bos taurus peroxisome proliferator activated receptor gamma coactivator 1 alpha (PPARGC1A), mRNA4e-33btcn20521 Bt.12148.1.S1_at, Bt.20920.1.S1_at, Bt.5823.1.S1_at, Bt.5814.1.A1_at
11682:15537_CL4Contig1-B:rNM_013261Homo sapiens peroxisome proliferative activated receptor, gamma, coactivator 1, alpha (PPARGC1A), mRNANM_177945Bos taurus peroxisome proliferator activated receptor gamma coactivator 1 alpha (PPARGC1A), mRNA4e-33btcn20521 Bt.12148.1.S1_at, Bt.20920.1.S1_at, Bt.5823.1.S1_at, Bt.5814.1.A1_at
11683:18498_CL1Contig1-B:rNM_013367Homo sapiens anaphase promoting complex subunit 4 (ANAPC4), mRNAXM_592445PREDICTED: Bos taurus similar to anaphase-promoting complex subunit 4 (LOC514572), mRNA4e-33btcn14982 Bt.28388.1.S1_at
11684:17541_29236092-A:fXM_944863, XM_933301, XM_940889, XM_376310, XM_933306, XM_944866PREDICTED: Homo sapiens zinc finger, CCHC domain containing 4, transcript variant 1 (ZCCHC4), mRNAXM_588725PREDICTED: Bos taurus similar to Zinc finger CCHC domain containing protein 4 (LOC511397), mRNA4e-33btcn14985 (1535 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11685:4504_CL2Contig1-B:fNM_018323Homo sapiens phosphatidylinositol 4-kinase type 2 beta (PI4K2B), mRNAXM_600059PREDICTED: Bos taurus similar to phosphatidylinositol 4-kinase type-II beta (LOC521790), mRNA4e-33btcn14973 Bt.25341.1.A1_at
11686:21836_CL3Contig6-B:fNM_015236Homo sapiens latrophilin 3 (LPHN3), mRNANM_181033Bos taurus latrophilin 3 (LEC3), mRNA4e-33AF111095, AF111089, btcn14977, AF111094, btcn14978, AF111087, AF111093, AF111086, AF111091, btcn14979, AF111088, AF111092 Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at Bt.13181.1.S1_a_at
11687:1896_CL1Contig1-B:rNM_024574Homo sapiens chromosome 4 open reading frame 31 (C4orf31), mRNAXM_597721PREDICTED: Bos taurus similar to CG30418-PA (LOC519500), mRNA4e-33btcn17883 Bt.3405.2.S1_at (4643 bases away)
11688:4749_17037514-A:fNM_018699Homo sapiens PR domain containing 5 (PRDM5), mRNAXM_617668PREDICTED: Bos taurus similar to PR domain containing 5 (LOC537500), partial mRNA2e-22BM106444 Bt.26248.1.A1_at (17024 bases away)
11689:12108_CL1Contig1-B:fNM_006424Homo sapiens solute carrier family 34 (sodium phosphate), member 2 (SLC34A2), mRNANM_174661Bos taurus solute carrier family 34 (sodium phosphate), member 2 (SLC34A2), mRNA4e-33btcn28737 Bt.84.1.S1_at, Bt.21137.2.S1_at, Bt.21137.1.S1_at
1168:7614_CL1Contig1-B:rNM_001001521, NM_006759Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), transcript variant 1, mRNANM_174212Bos taurus UDP-glucose pyrophosphorylase 2 (UGP2), mRNA4e-33CX736439, btcn6048, btcn6046, DV784183, DY215852 Bt.29330.1.A1_at, Bt.3567.1.S1_at Bt.29330.1.A1_at, Bt.3567.1.S1_at Bt.29330.1.A1_at, Bt.3567.1.S1_at Bt.29330.1.A1_at, Bt.3567.1.S1_at Bt.3567.1.S1_at
11690:4903_CL1Contig1-B:fNM_015187Homo sapiens KIAA0746 protein (KIAA0746), mRNAXM_615042PREDICTED: Bos taurus hypothetical LOC535060 (LOC535060), mRNA4e-33btcn28731 Bt.24923.1.S1_at, Bt.24923.2.S1_a_at
11691:13252_CL1Contig3-A:rXM_866800PREDICTED: Bos taurus hypothetical protein LOC615093 (LOC615093), mRNA4e-33
11692:6618_CL1Contig1-A:fNM_153825, NM_016955Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP), transcript variant 1, mRNAbtcn26792 Bt.28527.2.S1_at (2076 bases away)
11693:1422_CL2Contig1-A:rXM_614279PREDICTED: Bos taurus similar to leucine-rich repeat LGI family, member 2 (LOC541046), mRNA4e-33
11694:29708_CL2Contig1-B:rNM_001358Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15 (DHX15), mRNAXM_864986PREDICTED: Bos taurus similar to Putative pre-mRNA splicing factor RNA helicase (DEAH box protein 15), transcript variant 2 (LOC512327), mRNA4e-33DT885116, btcn26784 Bt.8715.1.S1_at Bt.8715.1.S1_at
11695:3438_CL1Contig1-A:f
11696:43219_CL1Contig1-A:f
11697:7973_17994585-A:fNM_000730Homo sapiens cholecystokinin A receptor (CCKAR), mRNAXM_874919PREDICTED: Bos taurus similar to Cholecystokinin type A receptor (CCK-A receptor) (CCK-AR) (Cholecystokinin-1 receptor) (CCK1-R), transcript variant 3 (LOC506207), mRNA4e-33btcn52561 Bt.20321.1.S1_at (36889 bases away)
11698:3613_CL1Contig1-B:rNM_018317Homo sapiens TBC1 domain family, member 19 (TBC1D19), mRNAXM_867258PREDICTED: Bos taurus similar to TBC1 domain family, member 19 (LOC615452), mRNA4e-33btcn52560, DV834296 Bt.8650.1.A1_at (85060 bases away) Bt.8650.1.A1_at (85397 bases away)
11699:441_CL1Contig1-B:rNM_020860Homo sapiens stromal interaction molecule 2 (STIM2), mRNAXM_875291PREDICTED: Bos taurus similar to Stromal interaction molecule 2 precursor, transcript variant 5 (LOC541299), mRNA4e-33btcn52557, btcn52558 Bt.8650.1.A1_at Bt.8650.1.A1_at (5852 bases away)
1169:1912_45066256-B:fNM_015535Homo sapiens DNA polymerase-transactivated protein 6 (DNAPTP6), mRNAXM_874628PREDICTED: Bos taurus hypothetical LOC539299, transcript variant 3 (LOC539299), mRNA4e-33CB437797, DV793375, DV821096, btcn31197, DV929184, btcn31201, AM019200, BG692117 Bt.14116.1.A1_at Bt.14116.1.A1_at (8874 bases away) Bt.14116.1.A1_at (2434 bases away) Bt.14116.1.A1_at (8906 bases away) Bt.14116.1.A1_at (8893 bases away) Bt.14116.1.A1_at Bt.14116.1.A1_at (61886 bases away) Bt.14116.1.A1_at (2545 bases away)
116:1728_CL1Contig1-B:rNM_018023Homo sapiens YEATS domain containing 2 (YEATS2), mRNAXM_879278PREDICTED: Bos taurus similar to microtubule-associated protein 6, transcript variant 2 (LOC614904), mRNA4e-33btcn863, DV873364, btcn866 Bt.8251.2.S1_at Bt.8251.2.S1_at, Bt.8251.1.A1_at Bt.28331.1.A1_at, Bt.8251.2.S1_at, Bt.8251.1.A1_at
11700:12214_CL2Contig1-B:fNM_016586Homo sapiens MAP3K12 binding inhibitory protein 1 (MBIP), mRNACV975558, btcn16030, btcn16029 Bt.4017.1.S1_at Bt.4017.1.S1_at, Bt.4017.2.S1_at Bt.4017.1.S1_at
11701:44711_45456596-A:fNM_004784Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 (NDST3), mRNAXM_602456PREDICTED: Bos taurus similar to N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3, transcript variant 1 (LOC524136), mRNA4e-33btcn29706 Bt.28825.1.A1_at (26375 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11703:26231_CL6Contig1-B:rNM_003619Homo sapiens protease, serine, 12 (neurotrypsin, motopsin) (PRSS12), mRNAXM_874253PREDICTED: Bos taurus similar to neurotrypsin precursor, transcript variant 4 (LOC512034), mRNA4e-33btcn29709, btcn29710 Bt.24542.2.S1_a_at (46296 bases away) Bt.24542.2.S1_a_at (21606 bases away)
11704:26231_CL6Contig2-B:rNM_003619Homo sapiens protease, serine, 12 (neurotrypsin, motopsin) (PRSS12), mRNAXM_874253PREDICTED: Bos taurus similar to neurotrypsin precursor, transcript variant 4 (LOC512034), mRNA4e-33btcn29711 Bt.24542.2.S1_a_at, Bt.24542.2.S1_at
11706:34673_CL1Contig1-B:fNM_020961Homo sapiens KIAA1627 protein (KIAA1627), mRNAXM_609874PREDICTED: Bos taurus similar to CG7818-PA (LOC531382), mRNA4e-33btcn29705 Bt.12669.2.S1_at, Bt.12669.1.A1_at
11707:5170_CL1Contig1-A:fNM_018302Homo sapiens chromosome 4 open reading frame 19 (C4orf19), mRNAXM_588757PREDICTED: Bos taurus hypothetical LOC511424 (LOC511424), mRNA4e-33btcn27254 Bt.22022.1.A1_at
11708:14644_CL1Contig1-A:rXM_049078, XM_940885PREDICTED: Homo sapiens KIAA1239 protein (KIAA1239), mRNAXM_587308PREDICTED: Bos taurus similar to T05C3.2 (LOC539460), partial mRNA4e-33btcn27255 Bt.22022.1.A1_at (86389 bases away)
1170:27427_CL1Contig1-A:fNM_152387Homo sapiens potassium channel tetramerisation domain containing 18 (KCTD18), mRNAXM_875040PREDICTED: Bos taurus similar to potassium channel tetramerisation domain containing 18, transcript variant 4 (LOC613694), mRNA4e-33btcn31195 Bt.2900.1.A1_at, Bt.10469.1.S1_at
11710:14982_CL1Contig2-B:rXM_611974PREDICTED: Bos taurus TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 (TBC1D1), partial mRNA4e-33
11711:3264_10239899-A:rNM_018290Homo sapiens phosphoglucomutase 2 (PGM2), mRNAXM_583514PREDICTED: Bos taurus similar to phosphoglucomutase 2 (LOC506980), mRNA4e-33btcn52539 Bt.29316.1.A1_at (4315 bases away)
11714:9496_29264091-A:f
11715:29534_CL7Contig1-B:rNM_002662Homo sapiens phospholipase D1, phosphatidylcholine-specific (PLD1), mRNAXM_608827PREDICTED: Bos taurus similar to Kruppel-like factor 3 (Basic kruppel-like factor) (CACCC-box binding protein BKLF) (TEF-2) (LOC530358), mRNA4e-33btcn16497.1, btcn7756, btcn7758 Bt.13996.3.A1_at (33388 bases away) Bt.13996.3.A1_at Bt.13996.3.A1_at (33331 bases away)
11716:13365_CL1Contig1-B:rNM_003359Homo sapiens UDP-glucose dehydrogenase (UGDH), mRNANM_174211Bos taurus UDP-glucose dehydrogenase (UGDH), mRNA4e-33btcn12949 Bt.5538.1.S1_at
11717:2311_CL1Contig1-A:fNM_194451, NM_006859Homo sapiens lipoic acid synthetase (LIAS), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNANM_001017944Bos taurus lipoic acid synthetase (LIAS), mRNA4e-33btcn12951, btcn12950 Bt.9756.1.S1_at Bt.9756.1.S1_at
11718:2119_CL1Contig2-B:fNM_022916, XM_942689, XM_927197Homo sapiens vacuolar protein sorting 33 homolog A (S. cerevisiae) (VPS33A), mRNAXM_871377PREDICTED: Bos taurus similar to ribosomal protein L9 (LOC619061), mRNA4e-33btcn5416, btcn6344.7, DV779285, btcn12944.7, btcn5417, btcn5415.7, btcn12945.6, CB225990.7, DV779726.7, btcn12948.7, btcn22759.6, DV782306.5, btcn12946.7, DV780268.7, btcn53593 Bt.2170.1.A1_at Bt.2170.1.A1_at (1006 bases away) Bt.2170.1.A1_at (980 bases away) Bt.2170.1.A1_at (980 bases away) Bt.2170.1.A1_at Bt.2170.1.A1_at (980 bases away) Bt.2170.1.A1_at (996 bases away) Bt.2170.1.A1_at (1037 bases away) Bt.2170.1.A1_at (980 bases away) Bt.2170.1.A1_at (980 bases away) Bt.2170.1.A1_at (1000 bases away) Bt.2170.1.A1_at (1005 bases away) Bt.2170.1.A1_at (1005 bases away) Bt.2170.1.A1_at (980 bases away) Bt.2170.1.A1_at (980 bases away)
11719:30042_CL3Contig1-A:fNM_175737Homo sapiens klotho beta (KLB), mRNAXM_592844PREDICTED: Bos taurus similar to klotho beta like (LOC514925), mRNA3e-28btcn12954 Bt.25033.1.A1_at
1171:5473_CL2Contig1-B:fNM_052851, NM_178007, NM_178006Homo sapiens START domain containing 13 (STARD13), transcript variant gamma, mRNAXM_582091PREDICTED: Bos taurus similar to START domain containing 13 isoform alpha (LOC538697), mRNA4e-33btcn31192 Bt.28651.1.S1_at (5989 bases away)
11720:14916_CL2Contig1-B:rNM_014988Homo sapiens hypothetical protein (DKFZP686A01247), mRNAXM_615173PREDICTED: Bos taurus similar to CG31534-PA, isoform A, transcript variant 1 (LOC535165), mRNA4e-33AV667836, btcn37026 Bt.10388.3.S1_at (6485 bases away) Bt.10388.3.S1_at, Bt.10388.2.S1_at
11722:9765_CL1Contig1-B:rNM_019027Homo sapiens RNA-binding protein (FLJ20273), mRNAXM_613340PREDICTED: Bos taurus similar to synaptotagmin binding, cytoplasmic RNA interacting protein, transcript variant 1 (LOC540831), mRNA4e-33btcn8187, btcn8183 Bt.3189.1.A1_at, Bt.17808.1.S1_at, Bt.14444.1.A1_at, Bt.28685.1.S1_at, Bt.22438.1.S1_at, Bt.3189.2.S1_at Bt.3189.1.A1_at, Bt.3189.2.S1_at
11723:16763_CL1Contig1-B:fNM_024677Homo sapiens NOL1/NOP2/Sun domain family, member 7 (NSUN7), mRNAXM_612659PREDICTED: Bos taurus similar to Y53F4B.4a (LOC533295), mRNA4e-33btcn8187 Bt.3189.1.A1_at, Bt.17808.1.S1_at, Bt.14444.1.A1_at, Bt.28685.1.S1_at, Bt.22438.1.S1_at, Bt.3189.2.S1_at
11724:18419_CL10Contig1-B:rNM_173075Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 2 (Fe65-like) (APBB2), mRNAXM_591796PREDICTED: Bos taurus similar to Amyloid beta A4 precursor protein-binding family B member 2 (Fe65-like protein) (LOC514013), partial mRNA4e-33btcn8191, btcn8190 Bt.25567.1.A1_at Bt.17637.3.A1_at, Bt.24324.1.A1_at, Bt.19173.1.A1_at, Bt.25567.1.A1_at
11726:34935_CL2Contig2-A:fNM_025132Homo sapiens WD repeat domain 19 (WDR19), mRNAXM_613099PREDICTED: Bos taurus similar to WD repeat domain 19 (LOC533633), partial mRNA4e-33btcn37768 Bt.19838.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11727:26222_CL1Contig1-B:fNM_002913Homo sapiens replication factor C (activator 1) 1, 145kDa (RFC1), mRNAXM_592754PREDICTED: Bos taurus similar to Activator 1 140 kDa subunit (Replication factor C large subunit) (A1 140 kDa subunit) (RF-C 140 kDa subunit) (Activator 1 large subunit) (DNA-binding protein PO-GA) (LOC514842), mRNA4e-33btcn37767, btcn37765 Bt.1313.1.S1_at Bt.1313.1.S1_at (401 bases away)
11728:26222_58765178-A:rXM_592754PREDICTED: Bos taurus similar to Activator 1 140 kDa subunit (Replication factor C large subunit) (A1 140 kDa subunit) (RF-C 140 kDa subunit) (Activator 1 large subunit) (DNA-binding protein PO-GA) (LOC514842), mRNA4e-33btcn37765.1
11729:13363_29218027-A:fNR_002818, NM_207406Homo sapiens ring finger protein 126 pseudogene 1 (RNF126P1) on chromosome 17XM_866083PREDICTED: Bos taurus hypothetical protein LOC614543 (LOC614543), mRNA2e-23CB436218 Bt.19018.1.A1_at (24326 bases away)
1172:21673_CL1Contig1-B:fNM_015032Homo sapiens androgen-induced proliferation inhibitor (APRIN), mRNAXM_613447PREDICTED: Bos taurus similar to androgen-induced prostate proliferative shutoff associated protein isoform 1 (LOC533890), mRNA1e-14btcn31202 Bt.24024.1.A1_a_at (162040 bases away)
11730:37646_60981912-A:rNM_153686Homo sapiens ligand dependent nuclear receptor corepressor-like (LCORL), mRNAbtcn28549 Bt.17915.2.S1_a_at (112855 bases away)
11731:6536_CL1Contig2-B:rNM_022346, NM_153686Homo sapiens chromosome condensation protein G (HCAP-G), mRNAXM_589564PREDICTED: Bos taurus similar to chromosome condensation protein G (LOC512117), mRNA4e-33btcn28538 Bt.17915.2.S1_a_at, Bt.17915.3.S1_a_at, Bt.17915.1.S1_at
11732:24418_CL2Contig1-A:fNM_018177Homo sapiens Nedd4 binding protein 2 (N4BP2), mRNAXM_587938PREDICTED: Bos taurus similar to Nedd4 binding protein 2 (LOC539533), mRNA4e-33btcn28536 Bt.2325.1.S1_at (33124 bases away)
11733:2876_28158192-A:rNM_004310 (360 bases away)Homo sapiens ras homolog gene family, member H (RHOH), mRNAbtcn28540 Bt.19848.1.A1_at (59794 bases away)
11734:20957_CL1Contig1-B:f
11735:1698_28158712-B:rNM_018126Homo sapiens transmembrane protein 33 (TMEM33), mRNAXM_866521PREDICTED: Bos taurus similar to Transmembrane protein 33 (DB83 protein) (LOC614879), mRNA4e-33btcn2133 Bt.22326.1.A1_at (43228 bases away)
11736:3270_CL1Contig1-B:fXM_872612PREDICTED: Bos taurus similar to solute carrier family 30 (zinc transporter), member 9, transcript variant 6 (LOC522345), mRNA4e-33
11737:14521_CL1Contig1-B:rNM_021927Homo sapiens GUF1 GTPase homolog (S. cerevisiae) (GUF1), mRNAXM_872916PREDICTED: Bos taurus similar to CG32527-PB, isoform B, transcript variant 3 (LOC522459), mRNA4e-33btcn4586 Bt.21366.1.A1_at, Bt.21366.2.S1_at
11738:34974_CL39Contig1-A:rNM_006206Homo sapiens platelet-derived growth factor receptor, alpha polypeptide (PDGFRA), mRNAXM_590921PREDICTED: Bos taurus platelet-derived growth factor receptor, alpha polypeptide (PDGFRA), mRNA4e-33btcn43708, btcn43709 Bt.9423.1.S1_at (2015 bases away) Bt.9423.1.S1_at
11739:2083_CL1Contig1-B:fNM_012110Homo sapiens cysteine-rich hydrophobic domain 2 (CHIC2), mRNAXM_866929PREDICTED: Bos taurus similar to Cysteine-rich hydrophobic domain 2 protein (BrX-like translocated in leukemia) (LOC615190), mRNA4e-33btcn37334, btcn43713.1, BM433796 Bt.24506.2.A1_at, Bt.24506.1.S1_at, Bt.3060.1.S1_a_at, Bt.3060.3.S1_at Bt.3060.1.S1_a_at, Bt.3060.3.S1_at Bt.3060.1.S1_a_at, Bt.3060.3.S1_at
1173:21673_CL2Contig1-A:fNM_015032Homo sapiens androgen-induced proliferation inhibitor (APRIN), mRNAXM_613447PREDICTED: Bos taurus similar to androgen-induced prostate proliferative shutoff associated protein isoform 1 (LOC533890), mRNA4e-33btcn31207 Bt.24024.1.A1_a_at (140740 bases away)
11741:34980_CL2Contig1-A:rNM_031310 (27168 bases away)Homo sapiens plasmalemma vesicle associated protein (PLVAP), mRNAXM_871058PREDICTED: Bos taurus similar to Bone marrow stromal antigen 2 (BST-2) (LOC618735), partial mRNA4e-33btcn35804, btcn35789 Bt.15788.3.S1_at (586 bases away) Bt.15788.3.S1_at
11742:34980_CL1Contig1-A:rNM_031310 (17125 bases away)Homo sapiens plasmalemma vesicle associated protein (PLVAP), mRNAXM_871059PREDICTED: Bos taurus similar to DAMP-1 protein (LOC618737), mRNA4e-18btcn35802 Bt.15788.3.S1_at (7110 bases away)
11743:11359_CL1Contig2-A:fNM_031310Homo sapiens plasmalemma vesicle associated protein (PLVAP), mRNANM_001035353Bos taurus plasmalemma vesicle associated protein (PLVAP), mRNA4e-33btcn35784, btcn35783 Bt.12641.2.S1_at, Bt.12641.1.S1_at Bt.12641.2.S1_at, Bt.12641.1.S1_at
11744:13586_CL1Contig2-B:fNM_032620 (261 bases away)Homo sapiens GTP binding protein 3 (mitochondrial) (GTPBP3), transcript variant V, mRNAXM_867558PREDICTED: Bos taurus similar to GTP binding protein 3 (mitochondrial) isoform V, transcript variant 2 (LOC539656), mRNA4e-33btcn35797 Bt.13697.1.S1_at, Bt.13697.2.S1_at, Bt.13697.1.S1_a_at
11746:12879_45470411-A:fNM_020959Homo sapiens transmembrane protein 16H (TMEM16H), mRNAXM_606613PREDICTED: Bos taurus similar to Y57G11C.37 (LOC528201), mRNA4e-33btcn35800 Bt.11654.1.A1_at (1349 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11747:16359_CL1Contig1-A:rNM_024050Homo sapiens chromosome 19 open reading frame 58 (C19orf58), mRNANM_001015583Bos taurus cross-immune reaction antigen PCIA1 (PCIA1), mRNA4e-33btcn35788, btcn9854.2 Bt.11654.1.A1_at (2033 bases away) Bt.11654.1.A1_at (3709 bases away)
11748:33143_CL1Contig1-A:rNM_023937Homo sapiens mitochondrial ribosomal protein L34 (MRPL34), nuclear gene encoding mitochondrial protein, mRNADN525759, btcn35767, btcn35766 Bt.20442.1.S1_at Bt.20442.1.S1_at Bt.20442.1.S1_at
11749:18650_CL3Contig1-B:fNM_024527Homo sapiens abhydrolase domain containing 8 (ABHD8), mRNAbtcn35785 Bt.9148.1.S1_at
11750:19247_CL1Contig1-B:fNM_014173 (158 bases away)Homo sapiens HSPC142 protein (HSPC142), transcript variant 2, mRNAbtcn35777, btcn35778 Bt.1166.1.S1_at Bt.1166.1.S1_at
11751:34890_CL1Contig1-B:fNM_031941Homo sapiens Usher syndrome 1C binding protein 1 (USHBP1), mRNAbtcn35782, DT887318, btcn35781 Bt.22118.2.S1_at, Bt.22118.1.A1_at, Bt.22118.3.S1_at Bt.22118.1.A1_at Bt.22118.1.A1_at, Bt.22118.3.S1_at
11752:209_CL3Contig1-B:rNM_005234Homo sapiens nuclear receptor subfamily 2, group F, member 6 (NR2F6), mRNAXM_880610PREDICTED: Bos taurus similar to nuclear receptor subfamily 2, group F, member 6, transcript variant 5 (LOC528188), mRNA4e-33btcn35768 Bt.6316.1.S1_at
11753:26339_CL1Contig2-B:rXM_880732PREDICTED: Bos taurus hypothetical protein LOC615639, transcript variant 4 (LOC615639), mRNA4e-33DN639928.2, btcn21982, btcn35792.2, btcn35790.2, btcn35791.2 Bt.1189.1.S1_at Bt.1189.1.S1_at Bt.1189.1.S1_at Bt.1189.1.S1_at Bt.1189.1.S1_at
11754:15708_CL1Contig4-B:fNM_018467Homo sapiens uncharacterized hematopoietic stem/progenitor cells protein MDS032 (MDS032), mRNAXM_867817PREDICTED: Bos taurus similar to USE1-like protein (Hematopoietic stem/progenitor cells protein MDS032) (Putative MAPK-activating protein PM26) (Protein p31), transcript variant 2 (LOC512890), mRNA4e-33btcn35774, btcn35773, btcn35772, BE810058, btcn35775, btcn35771 Bt.11133.3.S1_at, Bt.11133.1.S1_at Bt.11133.3.S1_at, Bt.11133.1.S1_at, Bt.11133.2.S1_a_at Bt.11133.3.S1_at, Bt.11133.1.S1_at, Bt.11133.2.S1_a_at Bt.11133.1.S1_at, Bt.11133.2.S1_a_at Bt.11133.3.S1_at, Bt.11133.1.S1_at, Bt.11133.2.S1_a_at Bt.11133.3.S1_at, Bt.11133.1.S1_at, Bt.11133.2.S1_a_at
11755:29432_CL8Contig1-B:fXM_880958PREDICTED: Bos taurus similar to myosin IXB, transcript variant 3 (LOC513493), mRNA4e-33
11756:13902_CL1Contig1-B:rXM_871372PREDICTED: Bos taurus similar to S-phase kinase-associated protein 1A isoform b (LOC619057), mRNA4e-33DV778946.4, btcn29834.4, BM076139.2, DY165062.3, DV786382.3, DV776524.2, btcn18111.4, DV791007, DV788508.3, btcn29833.4, DV783103.3
11758:7921_CL6Contig1-A:rNM_003202, NM_201634, NM_213648, NM_201632Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 1, mRNAXM_601400PREDICTED: Bos taurus similar to Transcription factor 7 (T-cell-specific transcription factor 1) (TCF-1) (T-cell factor 1) (LOC523105), mRNA4e-30btcn29837 Bt.21037.2.S1_at, Bt.21037.1.S1_at
11759:1014_CL3Contig1-B:rNM_003374Homo sapiens voltage-dependent anion channel 1 (VDAC1), mRNANM_174485Bos taurus voltage-dependent anion channel 1 (VDAC1), mRNA4e-33DV797278, DV885976, btcn29831, DV794724 Bt.3960.1.S1_a_at Bt.3960.1.S1_a_at Bt.3960.1.S1_a_at Bt.3960.1.S1_a_at
1175:22969_CL2Contig1-B:fXM_945390 (4584 bases away)PREDICTED: Homo sapiens hypothetical protein LOC652289 (LOC652289), mRNAXM_612459PREDICTED: Bos taurus similar to EH domain binding protein 1 (LOC533149), mRNA4e-33DN287683, btcn55478 Bt.6771.1.S1_at (482 bases away) Bt.6771.1.S1_at
11760:64_CL1Contig1-B:fNM_020199Homo sapiens chromosome 5 open reading frame 15 (C5orf15), mRNANM_001035299Bos taurus similar to Keratinocytes associated transmembrane protein 2 precursor (MGC127320), mRNA4e-33btcn29835, AV604675 Bt.10018.2.A1_at, Bt.10018.1.S1_at, Bt.10018.3.S1_at Bt.10018.1.S1_at (760 bases away)
11761:23279_CL1Contig1-B:fNM_080656, XM_938365, XM_372816Homo sapiens similar to RIKEN cDNA A430101B06 gene (MGC13017), mRNAXM_589670PREDICTED: Bos taurus hypothetical LOC512206 (LOC512206), mRNA4e-33btcn52446, DV790586 Bt.8531.2.S1_at, Bt.8531.1.A1_at Bt.8531.2.S1_at, Bt.26002.1.A1_at, Bt.8531.1.A1_at
11762:4774_CL1Contig3-B:rNM_003337Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B), mRNANM_001037459Bos taurus ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B), mRNA4e-33CR850953, btcn52443, DV779244, BF774443, btcn52442 Bt.20602.1.S1_at Bt.20602.1.S1_at, Bt.26394.1.S1_at Bt.20602.1.S1_at Bt.20602.1.S1_at Bt.20602.1.S1_at
11763:45360_49410852-A:rNM_016508 (2445 bases away)Homo sapiens cyclin-dependent kinase-like 3 (CDKL3), mRNAXM_615461PREDICTED: Bos taurus similar to cyclin-dependent kinase-like 3 (LOC541279), mRNA4e-33btcn52450 Bt.19789.1.A1_at (698 bases away)
11764:3751_CL3Contig1-B:fNM_002715Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (PPP2CA), mRNANM_181031Bos taurus protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (PPP2CA), mRNA4e-33btcn52438 Bt.1558.1.S1_at
11765:4329_CL4Contig1-A:rbtcn3763.1
11766:596_CL1Contig3-B:rNM_000358Homo sapiens transforming growth factor, beta-induced, 68kDa (TGFBI), mRNAXM_588272PREDICTED: Bos taurus similar to Transforming growth factor-beta induced protein IG-H3 precursor (Beta IG-H3) (Kerato-epithelin) (RGD-containing collagen associated protein) (RGD-CAP) (LOC539596), mRNA4e-33CK838119, btcn3760, btcn3759, btcn3758 Bt.4670.1.S1_at (895 bases away) Bt.4670.1.S1_at Bt.4670.1.S1_at Bt.4670.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11767:2648_CL1Contig1-B:rNM_012159 (3557 bases away)Homo sapiens F-box and leucine-rich repeat protein 21 (FBXL21), mRNANM_174380Bos taurus cell-derived chemotaxin 2 (LECT2), mRNA4e-33btcn3762, DV785160 Bt.195.1.A1_at Bt.195.1.A1_at
11768:28120_CL1Contig1-A:rNM_003858Homo sapiens cyclin K (CCNK), mRNAXM_609221PREDICTED: Bos taurus similar to cyclin K (LOC530744), mRNA4e-33btcn8380, CB465749 Bt.21198.1.A1_at (6389 bases away) Bt.21198.1.A1_at (6791 bases away)
11769:15384_CL1Contig5-A:fNM_199123, NM_032233Homo sapiens SET domain containing 3 (SETD3), transcript variant 1, mRNAXM_869864PREDICTED: Bos taurus similar to CG32732-PA (LOC617579), mRNA4e-33DV928723, btcn8379, btcn8377, btcn8378 Bt.16362.3.S1_at Bt.16362.3.S1_at Bt.16362.3.S1_at Bt.16362.3.S1_at (2891 bases away)
1176:639_CL2Contig1-B:fNM_005434 (18530 bases away)Homo sapiens mal, T-cell differentiation protein-like (MALL), mRNAXM_592095PREDICTED: Bos taurus similar to Nephrocystin-1 (Juvenile nephronophthisis 1 protein) (LOC514269), mRNA4e-33CR452681, btcn218 Bt.26203.1.S1_at Bt.26203.1.S1_at
11770:3959_CL1Contig1-B:fNM_002653Homo sapiens paired-like homeodomain transcription factor 1 (PITX1), mRNAXM_867395PREDICTED: Bos taurus similar to Pituitary homeobox 1 (Hindlimb expressed homeobox protein backfoot), transcript variant 2 (LOC508754), mRNA4e-33btcn8384, CB460028 Bt.17072.2.S1_at, Bt.17072.1.A1_at Bt.17072.2.S1_at, Bt.17072.1.A1_at
11771:7173_CL2Contig1-B:rNM_032151Homo sapiens pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 (PCBD2), mRNAbtcn8364, CB467192, btcn8365, btcn8362 Bt.28403.1.A1_at, Bt.11717.1.S1_s_at Bt.28403.1.A1_at, Bt.11717.1.S1_s_at Bt.28403.1.A1_at, Bt.11717.1.S1_s_at Bt.28403.1.A1_at, Bt.11717.1.S1_s_at
11772:5488_CL1Contig1-B:rNM_024715Homo sapiens chromosome 5 open reading frame 14 (C5orf14), mRNAXM_602222PREDICTED: Bos taurus similar to disulfide isomerase (LOC523911), mRNA4e-33btcn8370 Bt.22035.1.A1_at, Bt.22035.2.S1_at
11773:6484_CL1Contig1-A:fNM_152409Homo sapiens chromosome 5 open reading frame 24 (C5orf24), mRNAXM_867448PREDICTED: Bos taurus hypothetical LOC538535, transcript variant 2 (LOC538535), mRNA4e-33btcn8382 Bt.25752.1.A1_at
11775:42149_CL3Contig1-B:rNM_014829Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (DDX46), mRNAXM_586902PREDICTED: Bos taurus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (LOC509850), mRNA4e-33btcn8372, CB169915, BP101170 Bt.24011.1.A1_at, Bt.6783.1.A1_at, Bt.25262.1.A1_at Bt.25262.1.A1_at (433 bases away) Bt.25262.1.A1_at (670 bases away)
11776:17012_CL1Contig1-B:fNM_001745Homo sapiens calcium modulating ligand (CAMLG), mRNANM_001037625Bos taurus similar to Calcium-signal modulating cyclophilin ligand (CAML) (MGC133772), mRNA4e-33CO878576, btcn8367 Bt.13563.1.A1_at, Bt.13563.2.S1_at Bt.13563.1.A1_at, Bt.13563.2.S1_at
11777:19214_CL2Contig1-A:fNM_016103 (24975 bases away)Homo sapiens SAR1 gene homolog B (S. cerevisiae) (SAR1B), transcript variant 2, mRNADY178120 (979 bases away)
11778:6299_CL2Contig2-B:fNM_003713, NM_177414Homo sapiens phosphatidic acid phosphatase type 2B (PPAP2B), transcript variant 1, mRNAXM_870015PREDICTED: Bos taurus similar to phosphatidic acid phosphatase type 2B (LOC617707), mRNA4e-33CB460452, CR850804, CB462986, btcn37286, btcn37289.1 Bt.23509.1.S1_at Bt.23509.1.S1_at Bt.23509.1.S1_at Bt.23509.2.A1_at, Bt.23509.1.S1_at Bt.23509.1.S1_at
11779:45360_CL1Contig81-B:fNM_138609, NM_004893, NM_001040158, NM_138610Homo sapiens H2A histone family, member Y (H2AFY), transcript variant 2, mRNAXM_867604PREDICTED: Bos taurus similar to H2A histone family, member Y isoform 2, transcript variant 2 (LOC532990), mRNA4e-33CO877976, btcn37275, btcn37273 Bt.23073.1.S1_at Bt.23073.1.S1_at (246 bases away) Bt.23073.1.S1_at, Bt.5920.1.A1_at
1177:22640_CL1Contig1-A:fNM_005434 (4818 bases away)Homo sapiens mal, T-cell differentiation protein-like (MALL), mRNAXM_589778PREDICTED: Bos taurus similar to mal, T-cell differentiation protein-like (LOC512289), mRNA4e-33btcn216 Bt.13290.1.S1_at
11780:144_9021741-A:fNM_004598Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 (SPOCK1), mRNAXM_588502PREDICTED: Bos taurus similar to Testican-1 precursor (SPOCK protein) (LOC511211), partial mRNA4e-33btcn5490 Bt.24344.1.S1_at (514926 bases away)
11782:5715_CL15Contig1-A:rNM_017415Homo sapiens kelch-like 3 (Drosophila) (KLHL3), mRNAXM_612749PREDICTED: Bos taurus similar to Kelch-like protein 3 (LOC533364), mRNA4e-33btcn30993 Bt.24344.1.S1_at (11096 bases away)
11785:2232_CL1Contig1-B:rNM_006790Homo sapiens myotilin (MYOT), mRNAXM_584575PREDICTED: Bos taurus similar to titin immunoglobulin domain protein (LOC507884), mRNA4e-33DV793815, DV776748, btcn30980, DV794970, DV797559, DV793754, DV795873, DV798635, btcn30979, DV797132, DV792608, DV795376, DV798873 Bt.24880.1.S1_at Bt.24880.1.S1_at (322 bases away) Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at Bt.24880.1.S1_at
11786:5606_CL2Contig1-B:rNM_016603Homo sapiens chromosome 5 open reading frame 5 (C5orf5), mRNAXM_614001PREDICTED: Bos taurus similar to expressed sequence AW060714 (LOC540987), mRNA3e-12btcn30975, btcn30976 Bt.27403.1.S1_at Bt.27403.1.S1_at (9690 bases away)
11787:5723_CL2Contig2-B:rNM_183359, NM_006696, NM_139199Homo sapiens bromodomain containing 8 (BRD8), transcript variant 1, mRNAXM_880845PREDICTED: Bos taurus similar to bromodomain containing 8 isoform 1, transcript variant 13 (LOC539896), mRNA4e-33btcn30970, btcn30968 Bt.3158.1.S1_at, Bt.26540.1.S1_at Bt.3158.1.S1_at, Bt.26540.1.S1_at
11788:14701_CL1Contig1-B:fNM_005733Homo sapiens kinesin family member 20A (KIF20A), mRNAXM_606260PREDICTED: Bos taurus similar to kinesin family member 20A, transcript variant 1 (LOC527854), mRNA4e-33btcn30960 Bt.18081.2.S1_at, Bt.18081.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11789:23570_CL1Contig1-B:fNM_004661Homo sapiens CDC23 (cell division cycle 23, yeast, homolog) (CDC23), mRNAXM_590200PREDICTED: Bos taurus similar to Cell division cycle protein 23 homolog (Anaphase promoting complex subunit 8) (APC8) (Cyclosome subunit 8), transcript variant 1 (LOC512651), mRNA4e-33btcn30977 Bt.1176.1.A1_at
11790:5742_CL1Contig1-A:fNM_001790, NM_022809Homo sapiens cell division cycle 25C (CDC25C), transcript variant 1, mRNAXM_867870PREDICTED: Bos taurus similar to M-phase inducer phosphatase 3 (Dual specificity phosphatase Cdc25C), transcript variant 3 (LOC507731), mRNA4e-33btcn30947 Bt.9753.1.S1_at (14130 bases away)
11791:31942_CL3Contig1-A:fNM_016604Homo sapiens jumonji domain containing 1B (JMJD1B), mRNAXM_881052PREDICTED: Bos taurus similar to jumonji domain containing 1B, transcript variant 3 (LOC534005), mRNA4e-33btcn30984 Bt.19007.1.A1_at (19781 bases away)
11792:4572_CL2Contig1-B:rNM_016606Homo sapiens receptor accessory protein 2 (REEP2), mRNAXM_610950PREDICTED: Bos taurus similar to receptor expression enhancing protein 2 (LOC532432), mRNA4e-33btcn30987, btcn30986, DV910384, BE236978 Bt.1037.1.S1_at Bt.1037.1.S1_at Bt.1037.1.S1_at (615 bases away) Bt.1037.1.S1_at (924 bases away)
11793:361_CL1Contig1-A:fNM_001964Homo sapiens early growth response 1 (EGR1), mRNAXM_601394PREDICTED: Bos taurus early growth response protein 1 (egr1), mRNA4e-33btcn30971, btcn30973 Bt.22265.1.S1_at, Bt.27980.1.S1_at Bt.22265.1.S1_at
11794:18172_CL1Contig1-B:fNM_004730Homo sapiens eukaryotic translation termination factor 1 (ETF1), mRNAXM_881263PREDICTED: Bos taurus similar to eukaryotic translation termination factor 1 (predicted), transcript variant 11 (LOC541077), mRNA1e-30btcn30950 Bt.27192.1.S1_at
11795:24927_9736275-A:fNM_004134Homo sapiens heat shock 70kDa protein 9B (mortalin-2) (HSPA9B), nuclear gene encoding mitochondrial protein, mRNANM_001034524Bos taurus heat shock 70kDa protein 9B (mortalin-2) (HSPA9B), mRNA4e-24DV778152, DV782981, btcn30962, BE485397, CB460378 Bt.6063.1.S1_at Bt.6063.1.S1_at Bt.6063.1.S1_at Bt.6063.1.S1_at (116 bases away) Bt.6063.1.S1_at
11796:46145_CL35Contig1-A:rNM_032402, NM_018915, NM_032088, NM_018918, NM_002588, NM_018924, NM_003735, NM_018920, NM_018914, NM_003736, NM_018921, NM_018926, NM_018922, NM_018917, NM_018923, NM_032403, NM_018916, NM_018925, NM_032092, NM_018913, NM_018919, NM_018927, NM_018912Homo sapiens protocadherin gamma subfamily C, 3 (PCDHGC3), transcript variant 1, mRNAXM_598254PREDICTED: Bos taurus similar to protocadherin gamma subfamily C, 3 isoform 3, transcript variant 1 (LOC520024), mRNA4e-33btcn27487, btcn34789, btcn27483 Bt.12382.1.S1_at Bt.12382.1.S1_at (6295 bases away) Bt.12382.1.S1_at (1177 bases away)
11797:8586_CL2Contig1-B:fNM_005219Homo sapiens diaphanous homolog 1 (Drosophila) (DIAPH1), mRNAbtcn27494 Bt.22129.1.S1_at (42652 bases away)
11798:390_29253372-B:fNM_003883Homo sapiens histone deacetylase 3 (HDAC3), mRNAXM_881738PREDICTED: Bos taurus histone deacetylase 3, transcript variant 7 (HDAC3), mRNA4e-33btcn27468, CB446990 Bt.22129.1.S1_at Bt.22129.1.S1_at
11799:17618_7425190-A:fNM_173828Homo sapiens chromosome 5 open reading frame 16 (C5orf16), mRNAXM_881795PREDICTED: Bos taurus hypothetical LOC529327, transcript variant 3 (LOC529327), mRNA3e-28btcn27489 Bt.27175.3.A1_at, Bt.27175.1.A1_at, Bt.27175.2.S1_at
1179:1054_CL1Contig2-A:rNM_006196Homo sapiens poly(rC) binding protein 1 (PCBP1), mRNANM_001015565Bos taurus poly(rC) binding protein 1 (PCBP1), mRNA4e-33DV796438, btcn15242, DV776290, DV780297, DV786326, DV798344, DV779413, CR551863 Bt.4620.1.S1_at Bt.4620.1.S1_at Bt.4620.1.S1_at Bt.4620.1.S1_at Bt.4620.1.S1_at Bt.4620.1.S1_at Bt.4620.1.S1_at Bt.4620.1.S1_at
117:11832_CL1Contig1-B:rNM_024871Homo sapiens MAP6 domain containing 1 (MAP6D1), mRNAXM_866904PREDICTED: Bos taurus similar to microtubule-associated protein 6, transcript variant 1 (LOC614904), mRNA4e-33btcn864 Bt.28331.1.A1_at, Bt.14018.2.S1_at, Bt.14018.1.S1_at
11800:30721_CL19Contig1-B:fNM_033449Homo sapiens FCH and double SH3 domains 1 (FCHSD1), mRNAXM_868556PREDICTED: Bos taurus similar to FCH and double SH3 domains 1, transcript variant 2 (LOC529296), mRNA4e-33btcn27497 Bt.21060.1.S1_at (3530 bases away)
11801:30721_17000147-B:fNM_022481Homo sapiens centaurin, delta 3 (CENTD3), mRNAXM_591458PREDICTED: Bos taurus similar to centaurin, delta 3 (LOC513722), mRNA4e-33btcn27481, BM287600 Bt.21060.1.S1_at Bt.21060.1.S1_at (315 bases away)
11802:30721_CL20Contig1-B:rNM_022481Homo sapiens centaurin, delta 3 (CENTD3), mRNAXM_591458PREDICTED: Bos taurus similar to centaurin, delta 3 (LOC513722), mRNA4e-33CK769723, btcn27496 Bt.21060.1.S1_at (18012 bases away) Bt.21060.1.S1_at (18376 bases away)
11803:9782_CL1Contig1-B:rNM_005471Homo sapiens glucosamine-6-phosphate deaminase 1 (GNPDA1), mRNAXM_881831PREDICTED: Bos taurus similar to Glucosamine-6-phosphate isomerase (Glucosamine-6-phosphate deaminase) (GNPDA) (GlcN6P deaminase) (Oscillin), transcript variant 2 (LOC522919), mRNA4e-33btcn27476, DN526786 Bt.7640.1.S1_at Bt.7640.1.S1_at
11804:15458_CL1Contig2-A:rNM_001024535Bos taurus KIAA0141 protein (KIAA0141), mRNA4e-33
11805:2683_CL4Contig1-A:fNM_015071Homo sapiens Rho GTPase activating protein 26 (ARHGAP26), mRNAXM_870513PREDICTED: Bos taurus similar to Rho-GTPase-activating protein 26 (Oligophrenin-1-like protein) (GTPase regulator associated with focal adhesion kinase) (LOC618189), partial mRNA4e-33btcn49297, btcn49178.15 Bt.5038.3.A1_at (211487 bases away) Bt.5038.3.A1_at (89481 bases away)
11806:3282_10122528-A:fNM_030964Homo sapiens sprouty homolog 4 (Drosophila) (SPRY4), mRNAXM_580740PREDICTED: Bos taurus similar to sprouty homolog 4 (LOC504593), mRNA4e-33btcn49293 Bt.18631.1.A1_at (1207 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11807:45360_CL76Contig6-A:rNM_170745Homo sapiens histone 1, H2aa (HIST1H2AA), mRNAXM_583595PREDICTED: Bos taurus similar to Histone H2A.1 (LOC538911), mRNA4e-33btcn45113 Bt.27906.1.A1_at, Bt.27906.2.S1_at
11808:795_56139699-A:rNM_170745 (318 bases away)Homo sapiens histone 1, H2aa (HIST1H2AA), mRNAXM_598354PREDICTED: Bos taurus similar to histone 3, H2ba (LOC520120), mRNA9e-22CV978978 Bt.27906.2.S1_at (280 bases away)
11809:24097_29265142-A:rXM_047499, XM_938760PREDICTED: Homo sapiens ring finger protein 187 (RNF187), mRNAXM_871079PREDICTED: Bos taurus similar to tripartite motif protein 11 (LOC618753), mRNA1e-30btcn45112, DN287360, btcn45110 Bt.20098.1.S1_at Bt.20098.1.S1_at Bt.20098.1.S1_at
11810:45360_51808754-A:fXM_937917, XM_938387, XM_926298, XM_929747, XM_292740, XM_293828, NM_006959Homo sapiens zinc finger protein 17 (ZNF17), mRNAXM_589359PREDICTED: Bos taurus similar to zinc finger protein 354B (LOC511931), mRNA4e-33CO878830 Bt.5504.1.S1_at (77299 bases away)
11811:28041_CL1Contig1-B:rXM_881979PREDICTED: Bos taurus similar to Nedd4 family interacting protein 1, transcript variant 7 (LOC541196), mRNA4e-33
11812:6347_CL1Contig1-B:rNM_005471 (45501 bases away)Homo sapiens glucosamine-6-phosphate deaminase 1 (GNPDA1), mRNANM_001034543Bos taurus golgi membrane protein SB140 (SMAP-5), mRNA4e-33DV786104.1, btcn18861.1 Bt.7640.1.S1_at (56251 bases away) Bt.7640.1.S1_at (56251 bases away)
11813:18110_CL1Contig2-B:fNR_002915 (137188 bases away)Homo sapiens small nucleolar RNA, H/ACA box 74A (SNORA74A) on chromosome 5XM_598197PREDICTED: Bos taurus similar to endoplasmic reticulum chaperone SIL1, homolog of yeast (LOC519966), partial mRNA4e-33btcn32869.1, btcn51916, CO880703.1 Bt.19593.1.A1_at (444 bases away) Bt.19593.1.A1_at Bt.19593.1.A1_at (444 bases away)
11814:37496_CL1Contig1-B:fNM_018834, NM_199189Homo sapiens matrin 3 (MATR3), transcript variant 2, mRNAXM_882030PREDICTED: Bos taurus similar to Matrin 3, transcript variant 2 (LOC505129), mRNA4e-33btcn51906, btcn51912, BG690144, DV777018 Bt.23236.2.S1_at, Bt.23236.1.A1_at, Bt.24955.1.S1_at Bt.23236.2.S1_at Bt.23236.2.S1_at Bt.23236.2.S1_at, Bt.23236.1.A1_at
11815:3063_CL1Contig2-B:rNM_001034636Bos taurus similar to Polyadenylate-binding protein-interacting protein 2 (Poly(A) binding protein-interacting protein 2) (PABP-interacting protein 2) (PAIP-2) (MGC128370), mRNA4e-33
11816:20097_CL1Contig1-B:rNM_016459Homo sapiens proapoptotic caspase adaptor protein (PACAP), mRNAXM_587621PREDICTED: Bos taurus hypothetical LOC510480, transcript variant 1 (LOC510480), mRNA4e-33btcn51915 Bt.20356.1.S1_at
11817:11333_CL1Contig1-A:fXM_374142PREDICTED: Homo sapiens hypothetical LOC389333 (LOC389333), mRNAbtcn51902, CR453867 Bt.3444.1.A1_at Bt.4024.1.S1_at, Bt.4024.2.S1_at, Bt.3444.1.A1_at, Bt.26531.1.S1_at
11818:42693_CL1Contig2-B:fXM_582494PREDICTED: Bos taurus similar to TATA-binding protein-like factor-interacting protein isoform 1, transcript variant 1 (LOC506099), mRNA4e-33
11819:5200_CL3Contig1-B:rNM_152686Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 18 (DNAJC18), mRNANM_001015649Bos taurus hypothetical protein LOC533660 (MGC29463), mRNA4e-33btcn1150, btcn51913 Bt.3710.1.S1_at (6663 bases away) Bt.11502.1.A1_at, Bt.3710.1.S1_at, Bt.7056.2.A1_at
1181:26692_4835927-A:fNM_005941, NM_022564Homo sapiens matrix metallopeptidase 16 (membrane-inserted) (MMP16), transcript variant 1, mRNAXM_604345PREDICTED: Bos taurus matrix metalloproteinase 16 (membrane-inserted) (MMP16), mRNA4e-33AF144760 Bt.13089.1.S1_at, Bt.13089.1.A1_at
11820:45360_CL102Contig1-A:rNM_006805Homo sapiens heterogeneous nuclear ribonucleoprotein A0 (HNRPA0), mRNAXM_593096PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein A0 (LOC540311), mRNA4e-33btcn18062 Bt.6493.1.S1_at, Bt.21790.1.S1_at, Bt.5216.1.S1_at
11821:4235_CL1Contig1-A:rNM_213609Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 (FAM19A1), mRNAbtcn44273, btcn18063 Bt.26147.1.A1_at (5824 bases away) Bt.26147.1.A1_at
11822:17242_16744497-B:fNM_152550 (82450 bases away)Homo sapiens SH3 domain containing ring finger 2 (SH3RF2), mRNAXM_612809PREDICTED: Bos taurus similar to SH3 domain containing ring finger 2 (LOC540718), mRNA4e-33btcn1125 Bt.22439.2.S1_at (106917 bases away)
11824:23707_CL1Contig1-B:rNM_001029869 (17412 bases away)Homo sapiens PLAC8-like 1 (PLAC8L1), mRNAXM_586381PREDICTED: Bos taurus similar to Leucyl-tRNA synthetase, cytoplasmic (Leucine--tRNA ligase) (LeuRS) (LOC509429), mRNA4e-33DT889832, btcn1112.1 Bt.27960.1.A1_at Bt.27960.1.A1_at
11825:14120_42730422-B:rNM_001040006, NM_006706Homo sapiens transcription elongation regulator 1 (TCERG1), transcript variant 1, mRNAXM_869095PREDICTED: Bos taurus similar to transcription elongation regulator 1, transcript variant 2 (LOC540964), mRNA4e-33btcn1119, CK778109, btcn1120, btcn1118 Bt.17075.1.A1_at, Bt.18018.1.A1_a_at, Bt.18018.2.S1_at Bt.18018.1.A1_a_at Bt.18018.1.A1_a_at Bt.18018.1.A1_a_at
11826:34974_CL55Contig1-B:rNM_002609Homo sapiens platelet-derived growth factor receptor, beta polypeptide (PDGFRB), mRNADV931777, btcn24651 Bt.7619.2.S1_at (83709 bases away) Bt.7619.2.S1_at (88524 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11828:2027_CL2Contig1-A:fNM_001804Homo sapiens caudal type homeobox transcription factor 1 (CDX1), mRNAXM_589247PREDICTED: Bos taurus similar to Homeobox protein CDX-1 (Caudal-type homeobox protein 1), transcript variant 1 (LOC511830), mRNA4e-33btcn24660 Bt.7619.2.S1_at (35619 bases away)
11829:6896_6946165-A:fNM_014228Homo sapiens solute carrier family 6 (neurotransmitter transporter, L-proline), member 7 (SLC6A7), mRNAXM_589452PREDICTED: Bos taurus similar to Sodium-dependent proline transporter (Solute carrier family 6 member 7) (LOC539786), mRNA4e-33btcn24662 Bt.7619.2.S1_at (7874 bases away)
1182:12478_CL1Contig2-B:rNM_017657, NM_203437, NM_001002243Homo sapiens aftiphilin (AFTPH), transcript variant 2, mRNAXM_613376PREDICTED: Bos taurus similar to aftiphilin protein isoform c, transcript variant 1 (LOC540837), mRNA4e-33CR938813, btcn11805, btcn11807, DV910491 Bt.11957.1.S1_at Bt.11957.1.S1_at Bt.11957.1.S1_at Bt.11957.1.S1_at
11830:1482_51811646-B:fNM_015981, NM_171825Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha (CAMK2A), transcript variant 1, mRNAXM_873899PREDICTED: Bos taurus similar to calcium/calmodulin-dependent protein kinase IIA isoform 1, transcript variant 23 (LOC530719), mRNA4e-33CO881717, BI849999, btcn24632, DV925955, btcn24633 Bt.7619.3.S1_at (6315 bases away) Bt.7619.3.S1_at (6303 bases away) Bt.7619.3.S1_at (1796 bases away) Bt.7619.3.S1_at (1943 bases away) Bt.7619.3.S1_at, Bt.7619.2.S1_at
11831:1316_CL2Contig1-A:fNM_001012301Homo sapiens arylsulfatase family, member I (ARSI), mRNAXM_593725PREDICTED: Bos taurus similar to RIKEN cDNA 9330196J05 (LOC540390), mRNA4e-33btcn24669, CK957444 Bt.28724.1.A1_a_at (916 bases away) Bt.28724.1.A1_a_at
11832:26826_CL1Contig1-B:fNM_001008656, NM_000356Homo sapiens Treacher Collins-Franceschetti syndrome 1 (TCOF1), transcript variant 2, mRNAXM_591291PREDICTED: Bos taurus similar to Treacher Collins-Franceschetti syndrome 1 isoform b (LOC513591), mRNA4e-33btcn24636 Bt.12734.1.S1_at, Bt.12734.2.A1_s_at
11833:16274_CL1Contig2-B:rNM_001025159, NM_001025158, NM_004355Homo sapiens CD74 molecule, major histocompatibility complex, class II invariant chain (CD74), transcript variant 2, mRNANM_001034735Bos taurus similar to CD74 antigen isoform b (MGC127643), mRNA4e-33btcn24626, btcn24627, btcn24631, DY150255, btcn24629, btcn24624, DV797015, btcn24625, btcn24623, btcn24630 Bt.23174.1.S1_at Bt.23174.1.S1_at (12 bases away) Bt.23174.1.S1_at Bt.23174.1.S1_at (2147 bases away) Bt.23174.1.S1_at (105 bases away) Bt.23174.1.S1_at Bt.23174.1.S1_at Bt.23174.1.S1_at (2110 bases away) Bt.23174.1.S1_at Bt.23174.1.S1_at
11834:13140_CL1Contig2-B:rNM_001025159 (23824 bases away)Homo sapiens CD74 molecule, major histocompatibility complex, class II invariant chain (CD74), transcript variant 1, mRNAXM_586495PREDICTED: Bos taurus ribosomal protein S14 (RPS14), mRNA4e-33btcn24620, btcn24619, btcn24622, DV796887, btcn24621, btcn24618, DT886175.1, DY200660 Bt.4241.1.S1_at Bt.4241.1.S1_at Bt.4241.1.S1_at Bt.4241.1.S1_at Bt.4241.1.S1_at Bt.4241.1.S1_at Bt.4241.1.S1_at Bt.4241.1.S1_at
11835:44711_CL2Contig1-A:fNM_001543Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 (NDST1), mRNAXM_591977PREDICTED: Bos taurus similar to N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1, transcript variant 1 (LOC514172), mRNA4e-33btcn24672 Bt.4241.1.S1_at (37696 bases away)
11836:2798_CL1Contig1-A:rNM_007286Homo sapiens synaptopodin (SYNPO), mRNAXM_612966PREDICTED: Bos taurus similar to Synaptopodin (LOC533531), mRNA2e-13btcn24657, DV795723, DV921456 Bt.6698.1.S1_at Bt.6698.1.S1_at (754 bases away) Bt.6698.1.S1_at
11837:102_CL1Contig2-A:rNM_001037818Bos taurus RNA binding motif protein 22 (RBM22), mRNA4e-33DV779028.2, btcn24642, btcn24644 Bt.28600.1.S1_at, Bt.23847.1.S1_at Bt.28600.1.S1_at Bt.28600.1.S1_at, Bt.23847.1.S1_at
11838:12508_CL1Contig1-B:fNM_016221Homo sapiens dynactin 4 (p62) (DCTN4), mRNAXM_875160PREDICTED: Bos taurus similar to dynactin subunit p62, transcript variant 4 (LOC613489), mRNA4e-33btcn24648, btcn24649 Bt.11245.1.S1_at (45510 bases away) Bt.11245.1.S1_at (57414 bases away)
11839:28644_CL1Contig1-A:fNM_032947Homo sapiens MSTP150 (MST150), mRNAbtcn24638 Bt.11245.1.S1_at
1183:3786_CL1Contig1-B:rXM_580624PREDICTED: Bos taurus similar to actin-related protein 2 (LOC538486), partial mRNA4e-33
11840:813_47688926-A:rNM_001387 (7031 bases away)Homo sapiens dihydropyrimidinase-like 3 (DPYSL3), mRNACN792946 Bt.5439.1.S1_at (6723 bases away)
11841:1777_CL3Contig1-B:fNM_001387Homo sapiens dihydropyrimidinase-like 3 (DPYSL3), mRNAXM_586836PREDICTED: Bos taurus similar to Dihydropyrimidinase-related protein 3 (DRP-3) (Unc-33-like phosphoprotein) (ULIP protein) (Collapsin response mediator protein 4) (CRMP-4) (LOC509796), mRNA4e-33btcn31346, btcn31347 Bt.5439.1.S1_at Bt.5439.1.S1_at
11842:278_CL3Contig1-A:rNM_181677, NM_181678, NM_181675, NM_181676, NM_004576, NM_181674Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform (PPP2R2B), transcript variant 1, mRNANM_001014879Bos taurus protein phosphatase 2, regulatory subunit B, beta (PPP2R2B), mRNA4e-33btcn12560, DV875329.1, btcn12559, DV835023, DV875329, btcn12563 Bt.23965.1.A1_at Bt.23965.1.A1_at (49084 bases away) Bt.23965.1.A1_at, Bt.19661.1.S1_at Bt.23965.1.A1_at Bt.23965.1.A1_at Bt.23965.1.A1_at
11843:32661_CL2Contig1-A:rNM_001025348Bos taurus serine protease inhibitor, Kazal type 1 (SPINK1), mRNA4e-33
11844:29757_49144647-A:fNM_206966 (6393 bases away)Homo sapiens similar to AVLV472 (MGC23985), mRNAXM_865476PREDICTED: Bos taurus hypothetical protein LOC614113 (LOC614113), mRNA4e-33btcn37520 Bt.9636.1.S1_at (78175 bases away)
11845:2568_49358295-A:fNM_206966 (70399 bases away)Homo sapiens similar to AVLV472 (MGC23985), mRNANM_001034603Bos taurus eukaryotic translation initiation factor 3, subunit 6 48kDa (EIF3S6), mRNA3e-15AJ672747 Bt.9636.1.S1_at (148847 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11846:1315_CL1Contig1-B:rNM_006846Homo sapiens serine peptidase inhibitor, Kazal type 5 (SPINK5), mRNAXM_592937PREDICTED: Bos taurus similar to Serine protease inhibitor Kazal-type 5 precursor (Lympho-epithelial Kazal-type related inhibitor) (LEKTI) (LOC515003), mRNA4e-33btcn37523, btcn37522 Bt.28891.1.S1_at (64161 bases away) Bt.28891.1.S1_at (12532 bases away)
11848:32661_CL1Contig1-A:rNM_006846 (15912 bases away)Homo sapiens serine peptidase inhibitor, Kazal type 5 (SPINK5), mRNAXM_865555PREDICTED: Bos taurus similar to Serine protease inhibitor Kazal-type 6 precursor (LOC614174), mRNA4e-33btcn37521 Bt.28891.1.S1_at
1184:339_CL1Contig1-B:rNM_181784Homo sapiens sprouty-related, EVH1 domain containing 2 (SPRED2), mRNAXM_876046PREDICTED: Bos taurus similar to sprouty-related protein with EVH-1 domain 2, transcript variant 5 (LOC519081), mRNA4e-33btcn21746 Bt.3684.1.S1_at (47219 bases away)
11850:115_CL2Contig1-A:fNM_001001526Bos taurus phosphodiesterase, cyclic GMP (rod receptor), alpha polypeptide (PDE6A), mRNA4e-33
11851:38776_CL11Contig1-A:rNM_000112Homo sapiens solute carrier family 26 (sulfate transporter), member 2 (SLC26A2), mRNANM_001040525Bos taurus DTD sulfate transporter (LOC513953), mRNA4e-33btcn44245 Bt.21071.1.S1_at (4008 bases away)
11852:6113_CL1Contig3-B:rXM_940209PREDICTED: Homo sapiens KIAA0194 protein (KIAA0194), mRNAXM_876276PREDICTED: Bos taurus similar to SMF protein, transcript variant 3 (LOC509419), mRNA4e-33btcn44246, btcn44248, CK966550 Bt.20108.1.S1_at Bt.20108.1.S1_at Bt.20108.1.S1_at (464 bases away)
11853:34974_6988671-B:fNM_005211Homo sapiens colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog (CSF1R), mRNAXM_586366PREDICTED: Bos taurus similar to colony stimulating factor 1 receptor precursor, transcript variant 3 (LOC509418), mRNA4e-33AW446884, BM254594, AW357581, btcn44253, btcn44251 Bt.6151.1.S1_at (243 bases away) Bt.6151.1.S1_at Bt.6151.1.S1_at (159 bases away) Bt.6151.1.S1_at Bt.6151.1.S1_at
11854:31272_9922875-A:fNM_001001669Homo sapiens FLJ41603 protein (FLJ41603), mRNAXM_605004PREDICTED: Bos taurus similar to Cdc42 guanine nucleotide exchange factor (GEF) 9 (LOC526631), mRNA4e-33btcn7273 Bt.16762.1.S1_at (20575 bases away)
11855:20913_13930425-A:fNM_001892, NM_001025105, NM_145203Homo sapiens casein kinase 1, alpha 1 (CSNK1A1), transcript variant 2, mRNANM_174711Bos taurus casein kinase 1, alpha 1 (CSNK1A1), mRNA3e-12btcn7271, btcn7255, btcn7256, AW669423, btcn51579, CK848869 Bt.17037.2.S1_at, Bt.17037.1.A1_at, Bt.4532.1.S1_at Bt.17037.2.S1_at, Bt.17037.1.A1_at, Bt.4532.1.S1_at Bt.15913.1.S1_at, Bt.17037.2.S1_at, Bt.4532.1.S2_at, Bt.17037.1.A1_at, Bt.4532.1.S1_at Bt.17037.2.S1_at, Bt.17037.1.A1_at, Bt.4532.1.S1_at Bt.17037.2.S1_at, Bt.17037.1.A1_at, Bt.4532.1.S1_at Bt.17037.2.S1_at, Bt.17037.1.A1_at, Bt.4532.1.S1_at
11856:16811_11696279-C:fNM_014443Homo sapiens interleukin 17B (IL17B), mRNAXM_581208PREDICTED: Bos taurus similar to Interleukin-17B precursor (IL-17B) (Cytokine-like protein Zcyto7) (Neuronal interleukin-17 related factor) (Interleukin-20) (IL-20), transcript variant 1 (LOC504992), mRNA4e-33BF599617 Bt.26903.1.A1_at (7177 bases away)
11857:2916_CL2Contig1-B:fXM_592471PREDICTED: Bos taurus similar to chloride ion pump-associated 55 kDa protein, transcript variant 1 (LOC514598), mRNA4e-33
11858:8734_CL2Contig1-A:rNM_152407Homo sapiens GrpE-like 2, mitochondrial (E. coli) (GRPEL2), nuclear gene encoding mitochondrial protein, mRNAXM_592472PREDICTED: Bos taurus similar to GrpE protein homolog 2, mitochondrial precursor (Mt-GrpE#2) (LOC514599), mRNA4e-33DY122615, CB434194, btcn33929.1, btcn7261 Bt.16330.2.S1_at Bt.16330.2.S1_at Bt.16330.2.S1_at, Bt.16330.1.A1_at Bt.16330.3.A1_at, Bt.16330.2.S1_at, Bt.16330.1.A1_at, Bt.18899.1.A1_at
11859:1821_CL1Contig1-B:rNM_152406Homo sapiens hypothetical protein FLJ36748 (FLJ36748), mRNAXM_587922PREDICTED: Bos taurus similar to actin filament associated protein (LOC510738), mRNA4e-33DV892912, btcn7269 Bt.11301.1.S1_at, Bt.9288.2.A1_at, Bt.17731.2.S1_at, Bt.17731.1.A1_at Bt.9288.1.S1_at, Bt.9288.2.A1_at, Bt.9288.3.A1_at
1185:279_CL3Contig1-B:rNM_002398Homo sapiens Meis1, myeloid ecotropic viral integration site 1 homolog (mouse) (MEIS1), mRNAXM_876781PREDICTED: Bos taurus similar to myeloid ecotropic viral integration site 1, transcript variant 11 (LOC613877), mRNA4e-33btcn43450, btcn43448, DT844941 Bt.25390.1.A1_at (36 bases away) Bt.25390.1.A1_at Bt.25390.1.A1_at
11860:1821_6860780-A:fNM_152406Homo sapiens hypothetical protein FLJ36748 (FLJ36748), mRNAXM_587922PREDICTED: Bos taurus similar to actin filament associated protein (LOC510738), mRNA1e-30DV892912, btcn7268 Bt.11301.1.S1_at, Bt.9288.2.A1_at, Bt.17731.2.S1_at, Bt.17731.1.A1_at Bt.17731.1.A1_at (22274 bases away)
11861:40495_CL2Contig1-B:rXM_877281PREDICTED: Bos taurus similar to Actin-binding LIM protein 3 (Actin-binding LIM protein family member 3) (abLIM3), transcript variant 2 (LOC613794), mRNA4e-33
11862:705_CL2Contig1-B:rNM_024577Homo sapiens SH3 domain and tetratricopeptide repeats 2 (SH3TC2), mRNAXM_616288PREDICTED: Bos taurus similar to SH3 domain and tetratricopeptide repeats 2 (LOC536167), mRNA4e-33btcn51419, btcn51420 Bt.711.1.A1_at (356 bases away) Bt.711.1.A1_at
11863:4618_28151693-A:rNM_000024Homo sapiens adrenergic, beta-2-, receptor, surface (ADRB2), mRNANM_174231Bos taurus adrenergic, beta-2, receptor, surface (ADRB2), mRNA2e-29btcn51418, CB165568 Bt.100.1.S1_at Bt.100.1.S1_at
11864:8233_CL1Contig3-B:rNM_002084Homo sapiens glutathione peroxidase 3 (plasma) (GPX3), mRNANM_174077Bos taurus glutathione peroxidase 3 (plasma) (GPX3), mRNA4e-33btcn27334, btcn27335, CB446312 Bt.12916.1.S1_at Bt.12916.1.S1_at Bt.12916.1.S1_at (878 bases away)
11865:8430_45475722-B:fNM_006058Homo sapiens TNFAIP3 interacting protein 1 (TNIP1), mRNANM_001024554Bos taurus Nef-associated factor 1 (TNIP1), mRNA7e-32DV797478, CK846317, btcn27342, AV663856, btcn27343 Bt.5432.3.S1_at Bt.5432.3.S1_at Bt.5432.1.S1_at, Bt.5432.3.S1_at, Bt.5432.2.S1_at Bt.5432.1.S1_at, Bt.5432.3.S1_at Bt.5432.3.S1_at, Bt.5432.2.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11866:21429_47684522-B:fNM_015621Homo sapiens coiled-coil domain containing 69 (CCDC69), mRNAXM_608339PREDICTED: Bos taurus hypothetical LOC529878 (LOC529878), partial mRNA4e-33btcn27341, btcn27340 Bt.5328.1.S1_at Bt.5328.1.S1_at (2839 bases away)
11867:18346_CL1Contig1-B:fNM_181774 (14221 bases away)Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 3 (SLC36A3), mRNAXM_580665PREDICTED: Bos taurus similar to GM2 ganglioside activator protein (LOC504524), mRNA4e-33btcn27932 Bt.1539.1.S1_at
1186:3938_CL3Contig1-B:rXM_614959PREDICTED: Bos taurus similar to Rho-GTPase-activating protein 25 (LOC534994), mRNA4e-33
11871:7855_CL1Contig1-A:fNM_181776Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 2 (SLC36A2), mRNAXM_866095PREDICTED: Bos taurus similar to solute carrier family 36 (proton/amino acid symporter), member 2, transcript variant 2 (LOC509629), mRNA4e-33btcn27935 Bt.1539.1.S1_at (61793 bases away)
11872:46145_CL15Contig1-A:rNM_001447Homo sapiens FAT tumor suppressor homolog 2 (Drosophila) (FAT2), mRNAXM_601340PREDICTED: Bos taurus similar to FAT tumor suppressor 2 precursor (LOC523046), partial mRNA4e-33btcn3644 Bt.16254.1.A1_at (51867 bases away)
11873:16669_CL1Contig1-B:fNM_001037611Bos taurus Ras-GTPase-activating protein SH3-domain-binding protein (G3BP), mRNA4e-33
11874:2071_10180958-A:fNM_000171Homo sapiens glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man syndrome) (GLRA1), mRNANM_174321Bos taurus glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man syndrome) (GLRA1), mRNA4e-33AF268375 Bt.5559.1.S1_at
11875:45360_CL729Contig1-A:r
11876:9496_CL1Contig1-B:rNM_018691Homo sapiens chromosome 5 open reading frame 3 (C5orf3), mRNANM_001038077Bos taurus similar to CG9590-PA (MGC133812), mRNA4e-33CX948286, DY181724, AJ818672, btcn35896 Bt.12043.1.S1_at Bt.12043.1.S1_at Bt.12043.1.S1_at Bt.12043.1.S1_at
11877:4902_CL1Contig1-A:rNM_005927Homo sapiens microfibrillar-associated protein 3 (MFAP3), mRNAXM_604234PREDICTED: Bos taurus microfibrillar-associated protein 3 (MFAP3), mRNA4e-33btcn35894 Bt.3927.1.S1_at, Bt.15363.1.S1_at, Bt.13156.1.S1_at
11878:42823_CL3Contig1-A:fXM_944439 (147816 bases away)PREDICTED: Homo sapiens similar to Eukaryotic translation initiation factor 4H (eIF-4H) (Williams-Beuren syndrome chromosome region 1 protein homolog), transcript variant 5 (LOC653994), mRNAXM_614660PREDICTED: Bos taurus similar to GalNAc transferase 10 isoform a (LOC534777), mRNA4e-33btcn35889.1 Bt.24330.1.S1_at (161078 bases away)
11879:3625_CL1Contig1-A:rNM_004821Homo sapiens heart and neural crest derivatives expressed 1 (HAND1), mRNAXM_596134PREDICTED: Bos taurus similar to Heart- and neural crest derivatives-expressed protein 1 (Extraembryonic tissues, heart, autonomic nervous system and neural crest derivatives-expressed protein 1) (eHAND) (LOC517952), mRNA4e-33DY081541, btcn35892, btcn35891 Bt.26677.1.S1_at Bt.26677.1.S1_at (44 bases away) Bt.26677.1.S1_at, Bt.1763.1.S1_at
1187:4740_CL1Contig1-A:rXM_926017, XM_926027, XM_936447, XM_936436, NM_173177, NM_006333Homo sapiens nuclear DNA-binding protein (C1D), transcript variant 1, mRNANM_001037448Bos taurus similar to nuclear DNA-binding protein (MGC133553), mRNA4e-33btcn22882 Bt.16683.1.S1_at
11880:3461_CL1Contig1-B:rNM_014822Homo sapiens SEC24 related gene family, member D (S. cerevisiae) (SEC24D), mRNAXM_580541PREDICTED: Bos taurus similar to Protein transport protein Sec24D (SEC24-related protein D) (LOC504422), mRNA2e-29DT814941, btcn35899 Bt.21800.1.S1_at Bt.21800.1.S1_at
11881:3318_CL2Contig1-B:rXM_582017PREDICTED: Bos taurus similar to la related protein (LOC505690), mRNA4e-33
11882:16332_15636200-A:rNM_198282Homo sapiens hypothetical protein LOC340061 (LOC340061), mRNAXM_613134PREDICTED: Bos taurus hypothetical LOC533661 (LOC533661), mRNA4e-33btcn1148 Bt.8549.2.S1_at (12637 bases away)
11883:2304_CL4Contig1-B:rXM_608566PREDICTED: Bos taurus similar to glutamine-fructose-6-phosphate transaminase 2 (LOC530101), partial mRNA4e-33
11885:16950_CL1Contig1-B:rNM_014666Homo sapiens clathrin interactor 1 (CLINT1), mRNAXM_866374PREDICTED: Bos taurus similar to Epsin-4 (Epsin-related protein) (EpsinR) (Enthoprotin) (Clathrin interacting protein localized in the trans-Golgi region) (Clint), transcript variant 2 (LOC538540), mRNA4e-33btcn43973, btcn43969 Bt.3105.1.S1_at, Bt.6227.1.S1_at Bt.3105.1.S1_at
11886:15297_CL1Contig1-A:fNM_173491Homo sapiens LSM11, U7 small nuclear RNA associated (LSM11), mRNAbtcn43980 Bt.27137.1.S1_at (7203 bases away)
11888:5036_CL1Contig2-B:fNM_017872Homo sapiens interphase cytoplasmic foci protein 45 (ICF45), mRNAXM_866393PREDICTED: Bos taurus similar to interphase cyctoplasmic foci protein 45, transcript variant 2 (LOC507084), mRNA4e-33btcn43975 Bt.27137.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11889:14016_CL3Contig1-A:fNM_024007Homo sapiens early B-cell factor (EBF), mRNAXM_617891PREDICTED: Bos taurus similar to early B-cell factor 1 (LOC537712), mRNA4e-33BG694108, btcn2732 Bt.27967.1.A1_at Bt.27967.1.A1_at
1188:65_CL1Contig2-B:fNM_138458 (480 bases away)Homo sapiens monad (LOC116143), mRNAXM_591087PREDICTED: Bos taurus similar to CG14353-PA, transcript variant 1 (LOC540032), mRNA4e-33btcn22878, BI682566 Bt.2781.1.S1_at (3729 bases away) Bt.2781.1.S1_at (32746 bases away)
11890:14206_CL1Contig1-A:fXM_941308, NM_144726Homo sapiens hypothetical protein FLJ31951 (FLJ31951), mRNAXM_613995PREDICTED: Bos taurus similar to CG2304-PA, isoform A (LOC534282), mRNA4e-33btcn2738 Bt.9337.1.S1_at (730 bases away)
11891:27893_CL3Contig1-B:rNM_033274, NM_023038Homo sapiens ADAM metallopeptidase domain 19 (meltrin beta) (ADAM19), transcript variant 1, mRNAXM_588134PREDICTED: Bos taurus similar to ADAM metallopeptidase domain 19 isoform 1 preproprotein (LOC510907), partial mRNA1e-30btcn34062 Bt.13604.1.S1_at (26995 bases away)
11892:9374_45489364-A:fNM_001037333, NM_014376, NM_001037332, NM_001001343Homo sapiens cytoplasmic FMR1 interacting protein 2 (CYFIP2), transcript variant 3, mRNACK971390 Bt.7948.2.S1_at (50993 bases away)
11893:584_CL7Contig1-A:fNM_005546Homo sapiens IL2-inducible T-cell kinase (ITK), mRNAbtcn34063 Bt.7948.2.S1_at (167334 bases away)
11894:8029_CL1Contig1-B:fNM_145049Homo sapiens ubiquitin-like domain containing CTD phosphatase 1 (UBLCP1), mRNAXM_584906PREDICTED: Bos taurus similar to ubiquitin-like domain containing CTD phosphatase 1 (LOC508163), mRNA4e-33btcn24592, CB459161, btcn24591 Bt.1089.1.A1_at (318 bases away) Bt.1089.1.A1_at Bt.1089.1.A1_at
11895:13994_555795-A:fNM_002187Homo sapiens interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) (IL12B), mRNANM_174356Bos taurus interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) (IL12B), mRNA4e-33U11815 Bt.523.1.S1_at
11896:5837_CL1Contig1-A:rXM_087672, XM_940683PREDICTED: Homo sapiens KIAA1935 protein (KIAA1935), mRNAXM_591573PREDICTED: Bos taurus similar to PWWP domain containing 2 (LOC540114), partial mRNA4e-33btcn27046 Bt.27009.1.S1_at
11897:2455_CL1Contig2-B:rNM_003314Homo sapiens tetratricopeptide repeat domain 1 (TTC1), mRNANM_001034217Bos taurus tetratricopeptide repeat domain 1 (TTC1), mRNA4e-33btcn27051, btcn27048 Bt.1925.1.S1_at Bt.1925.1.S1_at
11898:7225_CL1Contig1-A:fNM_000679Homo sapiens adrenergic, alpha-1B-, receptor (ADRA1B), mRNAbtcn27058 Bt.27996.1.S1_at
1189:21320_CL1Contig1-B:rNM_183085Bos taurus putatative 28 kDa protein (LOC360193), mRNA4e-33
118:20637_CL1Contig1-B:fNM_024871 (5759 bases away)Homo sapiens MAP6 domain containing 1 (MAP6D1), mRNANM_001015596Bos taurus presenilin associated, rhomboid-like preproprotein (PSARL), mRNA4e-33DY221518, CB465067.1, DN288740, btcn859.1, AJ688070, btcn858 Bt.4331.1.S1_at Bt.4331.1.S1_at Bt.4331.1.S1_at Bt.4331.1.S1_at Bt.4331.1.S1_at Bt.4331.1.S1_at
11900:45360_CL868Contig1-B:fNM_031908Homo sapiens C1q and tumor necrosis factor related protein 2 (C1QTNF2), mRNAXM_589781PREDICTED: Bos taurus similar to C1q and tumor necrosis factor related protein 2 (LOC539842), partial mRNA4e-33btcn30362 Bt.27065.1.A1_at (33592 bases away)
11901:5649_CL1Contig1-B:rNM_006425Homo sapiens step II splicing factor SLU7 (SLU7), mRNAXM_589813PREDICTED: Bos taurus similar to step II splicing factor SLU7, transcript variant 1 (LOC512318), mRNA4e-33btcn30357 Bt.15872.1.S1_at
11902:5649_37714256-A:fNM_006425Homo sapiens step II splicing factor SLU7 (SLU7), mRNAXM_589813PREDICTED: Bos taurus similar to step II splicing factor SLU7, transcript variant 1 (LOC512318), mRNA4e-33DV910215, btcn30357 Bt.15872.1.S1_at (730 bases away) Bt.15872.1.S1_at
11903:46305_CL21Contig1-A:fNM_022090 (4797 bases away)Homo sapiens transposon-derived Buster3 transposase-like (LOC63920), mRNAXM_878744PREDICTED: Bos taurus similar to transposon-derived Buster3 transposase-like, transcript variant 2 (LOC539846), mRNA1e-20btcn30363 Bt.27065.1.A1_at
11904:3243_CL1Contig1-A:fNM_001445 (1243 bases away)Homo sapiens fatty acid binding protein 6, ileal (gastrotropin) (FABP6), transcript variant 2, mRNAXM_592534PREDICTED: Bos taurus similar to fatty acid binding protein 6, ileal (gastrotropin) (LOC514650), partial mRNA4e-33btcn21046 Bt.9838.1.S1_at
11905:45360_CL894Contig1-B:rNM_000806Homo sapiens gamma-aminobutyric acid (GABA) A receptor, alpha 1 (GABRA1), mRNANM_174540Bos taurus gamma-aminobutyric acid (GABA) A receptor, alpha 1 (GABRA1), mRNA1e-30btcn53141.1 Bt.172.1.S1_at
11907:7658_CL2Contig2-B:fNM_001035478Bos taurus single-stranded DNA binding protein 2 (SSBP2), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11908:2102_9752990-A:rNM_130767Homo sapiens acyl-CoA thioesterase 12 (ACOT12), mRNAXM_603502PREDICTED: Bos taurus similar to cytosolic acetyl-CoA hydrolase (LOC525155), mRNA1e-30btcn22297 Bt.25680.1.A1_at
11909:7744_CL1Contig1-B:fNM_032280Homo sapiens zinc finger, CCHC domain containing 9 (ZCCHC9), mRNAXM_866679PREDICTED: Bos taurus similar to zinc finger, CCHC domain containing 9, transcript variant 3 (LOC506049), mRNA4e-33btcn23881, DV790309, btcn22293 Bt.12066.1.S1_at Bt.12066.1.S1_at Bt.12066.1.S1_at
1190:10557_15375905-A:fNM_015463Homo sapiens chromosome 2 open reading frame 32 (C2orf32), mRNAXM_877293PREDICTED: Bos taurus similar to chromosome 2 open reading frame 32, transcript variant 2 (LOC539715), mRNA4e-33btcn22888 Bt.16180.1.S1_at, Bt.8617.1.S1_at
11910:1243_CL4Contig1-B:rNM_001034656Bos taurus creatine kinase, mitochondrial 2 (sarcomeric) (CKMT2), mRNA4e-33
11911:1961_CL10Contig1-A:rNM_006909Homo sapiens Ras protein-specific guanine nucleotide-releasing factor 2 (RASGRF2), mRNAbtcn22286.1 Bt.23605.2.S1_at (84963 bases away)
11912:11270_CL1Contig1-B:rXM_582667PREDICTED: Bos taurus similar to DNA mismatch repair protein Msh3 (Divergent upstream protein) (DUP) (Mismatch repair protein 1) (MRP1) (LOC506244), partial mRNA4e-33btcn22292
11913:4429_CL15Contig1-B:fXM_927634, XM_937185, NM_001012267, NM_017680Homo sapiens asporin (LRR class 1) (ASPN), mRNANM_001034309Bos taurus similar to Asporin precursor (Periodontal ligament associated protein 1) (PLAP-1) (MGC128677), mRNA4e-33btcn55401, btcn17297, DV821494, btcn17295 Bt.22314.2.S1_at, Bt.22314.1.S1_at, Bt.5341.1.S1_at, Bt.17080.1.A1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at, Bt.23575.1.A1_at Bt.22314.2.S1_at, Bt.22314.1.S1_at, Bt.5341.1.S1_at, Bt.17080.1.A1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at, Bt.23575.1.A1_at Bt.5341.1.S1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at Bt.24211.2.S1_at, Bt.24211.1.A1_at
11914:19700_CL1Contig1-B:fNM_001393, NM_001012267Homo sapiens extracellular matrix protein 2, female organ and adipocyte specific (ECM2), mRNAbtcn17298, btcn55401, btcn17297 Bt.23575.1.A1_at Bt.22314.2.S1_at, Bt.22314.1.S1_at, Bt.5341.1.S1_at, Bt.17080.1.A1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at, Bt.23575.1.A1_at Bt.22314.2.S1_at, Bt.22314.1.S1_at, Bt.5341.1.S1_at, Bt.17080.1.A1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at, Bt.23575.1.A1_at
11915:7038_CL1Contig1-B:fNM_022755Homo sapiens inositol 1,3,4,5,6-pentakisphosphate 2-kinase (IPPK), mRNAXM_599340PREDICTED: Bos taurus similar to chromosome 9 open reading frame 12 (LOC521083), mRNA4e-33btcn46773.1, btcn17299 Bt.22314.2.S1_at (39771 bases away) Bt.22314.2.S1_at (29603 bases away)
11916:3398_CL1Contig1-B:fNM_014733Homo sapiens zinc finger, FYVE domain containing 16 (ZFYVE16), mRNAXM_866874PREDICTED: Bos taurus similar to Zinc finger FYVE domain-containing protein 16 (Endofin) (Endosome-associated FYVE domain protein), transcript variant 2 (LOC536671), mRNA4e-33btcn26289, btcn26290 Bt.27442.1.S1_at (56021 bases away) Bt.27442.1.S1_at (45645 bases away)
11917:531_CL2Contig1-A:rXM_293903, XM_940931PREDICTED: Homo sapiens similar to fibrillarin (LOC345630), mRNAXM_608002PREDICTED: Bos taurus similar to fibrillarin (LOC529551), mRNA4e-33btcn26292 Bt.22038.1.S1_a_at (13260 bases away)
11918:2053_CL1Contig3-B:rNM_002887Homo sapiens arginyl-tRNA synthetase (RARS), mRNAXM_879344PREDICTED: Bos taurus similar to arginyl-tRNA synthetase, transcript variant 3 (LOC506305), mRNA4e-33btcn26285, DT845511, CB462734, CB427762 Bt.22038.1.S1_at, Bt.22038.1.S1_a_at Bt.22038.1.S1_at, Bt.22038.1.S1_a_at Bt.22038.1.S1_at Bt.22038.1.S1_at, Bt.22038.1.S1_a_at
11919:9838_CL2Contig1-B:rNM_015238Homo sapiens WW, C2 and coiled-coil domain containing 1 (WWC1), mRNAXM_868972PREDICTED: Bos taurus similar to KIBRA protein (LOC520730), mRNA4e-33btcn26284, btcn26283 Bt.28483.2.A1_a_at (253 bases away) Bt.21563.2.A1_at, Bt.21563.1.S1_at
1191:5086_CL2Contig1-A:rNM_002357Homo sapiens MAX dimerization protein 1 (MXD1), mRNAXM_592508PREDICTED: Bos taurus similar to MAX dimerization protein 1 (LOC514626), mRNA4e-33btcn32340, btcn32344 Bt.3899.1.S1_a_at, Bt.26478.1.A1_at Bt.28271.1.A1_at
11920:45360_CL1116Contig1-A:fXM_614930PREDICTED: Bos taurus similar to odd Oz/ten-m homolog 2 (LOC541183), mRNA4e-33btcn26294
11922:45360_CL320Contig1-A:fXM_618487PREDICTED: Bos taurus similar to neurestin alpha (LOC538287), mRNA9e-22btcn26293 Bt.25045.1.S1_at, Bt.27244.1.A1_at
11926:4356_CL1Contig1-B:fNM_002890 (12858 bases away)Homo sapiens RAS p21 protein activator (GTPase activating protein) 1 (RASA1), transcript variant 1, mRNAXM_868921PREDICTED: Bos taurus similar to Cyclin H (MO15-associated protein) (p37) (p34) (LOC513399), partial mRNA6e-26btcn13508.1, btcn8633, btcn878, btcn8631 Bt.23257.1.S1_a_at Bt.23257.1.S1_a_at, Bt.177.1.S1_at Bt.23257.1.S1_a_at Bt.23257.1.S1_a_at
11927:3119_CL1Contig2-B:rXM_881083PREDICTED: Bos taurus similar to Probable cation-transporting ATPase 13A1, transcript variant 7 (LOC534369), mRNA4e-33
11929:5712_CL2Contig1-B:rXM_612292PREDICTED: Bos taurus similar to GEM-interacting protein (GMIP) (LOC533029), mRNA4e-33
1192:7397_CL1Contig1-A:rNM_144605Homo sapiens septin 12 transcript variant 2 (FLJ25410), mRNAXM_865968PREDICTED: Bos taurus similar to putative nucleic acid binding protein RY-1, transcript variant 3 (LOC512552), mRNA4e-33btcn32342.1, btcn48856, btcn32340.1, DT846590 Bt.7385.1.S1_at (14004 bases away) Bt.7385.1.S1_at (14156 bases away) Bt.7385.1.S1_at (14375 bases away) Bt.7385.1.S1_at (11686 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11930:8225_CL1Contig1-B:fNM_004720Homo sapiens endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 4 (EDG4), mRNAXM_868004PREDICTED: Bos taurus similar to Lysophosphatidic acid receptor Edg-4 (LPA receptor 2) (LPA-2), transcript variant 2 (LOC509748), mRNA4e-33btcn5744 Bt.27869.1.A1_at
11931:340_CL3Contig1-A:rNM_025245 (3513 bases away)Homo sapiens pre-B-cell leukemia transcription factor 4 (PBX4), mRNAXM_597995PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription factor 4 (LOC519770), mRNA3e-28btcn5734, btcn5735 Bt.8950.1.S1_at (35390 bases away) Bt.8950.1.S1_at (32994 bases away)
11932:1187_CL4Contig1-A:fXM_599000PREDICTED: Bos taurus similar to Cartilage intermediate layer protein 2 precursor (CILP-2) (LOC520750), mRNA1e-30
11933:1187_CL2Contig1-A:r
11934:2721_CL1Contig1-B:rNM_176672Bos taurus cell death-regulatory protein GRIM19 (GRIM19), mRNA4e-33
11935:638_CL2Contig1-A:fNM_017660Homo sapiens GATA zinc finger domain containing 2A (GATAD2A), mRNAbtcn5720 Bt.7614.1.S1_at, Bt.26902.1.A1_at, Bt.20981.1.S1_at
11936:2887_CL2Contig1-B:fNM_015329Homo sapiens KIAA0892 (KIAA0892), mRNAXM_606587PREDICTED: Bos taurus similar to CG4203-PA, transcript variant 1 (LOC528175), mRNA4e-33btcn5728, btcn5727 Bt.20515.1.S1_at Bt.20515.1.S1_at
11937:32459_CL1Contig1-B:rNM_172231Homo sapiens splicing factor 4 (SF4), mRNAXM_613558PREDICTED: Bos taurus similar to splicing factor 4 isoform a (LOC533971), mRNA4e-33DN526943, btcn5723 Bt.919.1.S1_at Bt.919.1.S1_at, Bt.919.2.S1_at
11938:5919_CL1Contig3-A:rNM_015073Homo sapiens signal-induced proliferation-associated 1 like 3 (SIPA1L3), mRNANM_175831Bos taurus cytochrome c oxidase subunit VIIc (COX7C), mRNA4e-33btcn24688.3, DV797768.3, btcn24691.2, DV792199.2, btcn46201.3, DY039338.3, DT840605.2, btcn31640.2, btcn13633.3, btcn24690.3 Bt.26010.1.A1_at (57904 bases away) Bt.26010.1.A1_at (57917 bases away) Bt.26010.1.A1_at (58081 bases away) Bt.26010.1.A1_at (57977 bases away) Bt.26010.1.A1_at (58035 bases away) Bt.26010.1.A1_at (57922 bases away) Bt.26010.1.A1_at (57904 bases away) Bt.26010.1.A1_at (57905 bases away) Bt.26010.1.A1_at (57932 bases away) Bt.26010.1.A1_at (57904 bases away)
11939:45360_746405-A:fNM_001884Homo sapiens hyaluronan and proteoglycan link protein 1 (HAPLN1), mRNANM_174288Bos taurus cartilage linking protein 1 (CRTL1), mRNA4e-33btcn46747 Bt.30.1.S1_at
1193:4016_CL1Contig1-B:fNM_178439Homo sapiens germ cell-less homolog 1 (Drosophila) (GMCL1), mRNAXM_591699PREDICTED: Bos taurus similar to Germ cell-less protein-like 1 (mGcl-1) (DP-interacting protein) (DIP) (LOC513934), mRNA4e-33btcn32348 Bt.22350.1.A1_at, Bt.28043.1.S1_at
11941:45360_9702028-A:rNM_001884 (69014 bases away)Homo sapiens hyaluronan and proteoglycan link protein 1 (HAPLN1), mRNAbtcn42108.1, btcn6072.1, btcn6071.1, btcn46743 Bt.5395.1.S1_a_at Bt.5395.1.S1_a_at Bt.5395.1.S1_a_at Bt.5395.1.S1_a_at, Bt.2129.2.S1_at, Bt.2129.1.S1_at
11942:6812_11920228-A:rNM_002397Homo sapiens MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C) (MEF2C), mRNAXM_873609PREDICTED: Bos taurus similar to MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C), transcript variant 24 (LOC512254), mRNA4e-33btcn17363, btcn17360 Bt.26013.1.A1_at, Bt.26420.1.A1_at, Bt.16150.1.A1_at, Bt.6869.1.S1_at Bt.26013.1.A1_at, Bt.26420.1.A1_at, Bt.16150.1.A1_at, Bt.6869.1.S1_at
11944:2147_CL2Contig1-B:fNM_153354Homo sapiens transmembrane protein 161B (TMEM161B), mRNAXM_587515PREDICTED: Bos taurus similar to CG7638-PA (LOC510378), mRNA4e-33btcn17359 Bt.13294.1.A1_at
11945:209_CL14Contig1-B:fNM_005654 (437 bases away)Homo sapiens nuclear receptor subfamily 2, group F, member 1 (NR2F1), mRNAbtcn5881 Bt.543.1.S1_at
11946:9616_CL2Contig1-B:rXR_000627 (72546 bases away)PREDICTED: Homo sapiens similar to ribosomal protein L23 (LOC222901), misc RNAXM_598046PREDICTED: Bos taurus similar to CG11156-PA (LOC519819), mRNA1e-30CX951375, DN531315, btcn30040 Bt.19348.1.A1_at (675534 bases away) Bt.19348.1.A1_at (674639 bases away) Bt.19348.1.A1_at (662077 bases away)
11947:9616_CL1Contig1-B:fNM_032290Homo sapiens ankyrin repeat domain 32 (ANKRD32), mRNAXM_598485PREDICTED: Bos taurus similar to ankyrin repeat domain 32 (LOC520250), mRNA1e-24btcn30042 Bt.3766.1.A1_at
11948:27061_CL1Contig1-B:fNM_001002796, NM_024717Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant L, mRNAXM_874670PREDICTED: Bos taurus similar to multiple C2-domains with two transmembrane regions 1 isoform S, transcript variant 10 (LOC533635), mRNA4e-33btcn30034 Bt.25101.1.S1_at (160745 bases away)
11949:9202_CL2Contig1-B:fNM_152548Homo sapiens family with sequence similarity 81, member B (FAM81B), mRNAXM_592828PREDICTED: Bos taurus similar to myosin, heavy polypeptide 6, cardiac muscle, alpha (LOC514910), mRNA4e-33btcn30029, btcn30030 Bt.18725.1.A1_at Bt.18725.1.A1_at
1194:45360_CL89Contig2-B:rNM_001153Homo sapiens annexin A4 (ANXA4), mRNANM_001001440Bos taurus annexin A4 (ANXA4), mRNA4e-33btcn32336, btcn32333, DV783226, DV781200 Bt.4116.1.S1_at (22794 bases away) Bt.4116.1.S1_at Bt.4116.1.S1_at (5802 bases away) Bt.4116.1.S1_at (362 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11950:12912_49427169-A:fNM_014639 (9 bases away)Homo sapiens KIAA0372 (KIAA0372), mRNAbtcn30038 Bt.21136.1.S1_at
11951:23796_CL1Contig1-B:rNM_198150Homo sapiens arylsulfatase family, member K (ARSK), mRNANM_001035400Bos taurus arylsulfatase family, member K (ARSK), mRNA4e-33btcn30033, DV840377 Bt.16276.1.A1_at Bt.16276.1.A1_at (13300 bases away)
11952:18246_51822491-A:fNM_199243Homo sapiens G protein-coupled receptor 150 (GPR150), mRNACO892190 Bt.16276.1.A1_at (14484 bases away)
11954:2610_CL2Contig1-B:fNM_022350 (2149 bases away)Homo sapiens leukocyte-derived arginine aminopeptidase (LRAP), mRNAXM_591271PREDICTED: Bos taurus similar to leukocyte-derived arginine aminopeptidase (LOC513572), mRNA1e-30btcn49742 Bt.25649.1.A1_at
11959:4345_CL1Contig1-B:rNM_153234Homo sapiens Lix1 homolog (mouse) (LIX1), mRNAXM_874999PREDICTED: Bos taurus similar to limb expression 1, transcript variant 5 (LOC535033), mRNA1e-30btcn49745 Bt.24351.1.A1_at
1195:1185_CL6Contig1-B:rNM_014911Homo sapiens AP2 associated kinase 1 (AAK1), mRNAXM_611658PREDICTED: Bos taurus similar to AP2 associated kinase 1 (LOC532546), mRNA4e-33btcn32367 Bt.28118.1.A1_at
11960:8867_CL1Contig1-B:fNM_018343Homo sapiens RIO kinase 2 (yeast) (RIOK2), mRNAXM_875368PREDICTED: Bos taurus similar to RIO kinase 2, transcript variant 5 (LOC540772), mRNA4e-33DN641045, btcn49743 Bt.19348.1.A1_at Bt.19348.1.A1_at
11962:45360_51809918-A:fNM_005354 (24850 bases away)Homo sapiens jun D proto-oncogene (JUND), mRNAXM_871108PREDICTED: Bos taurus similar to KIAA1683 (LOC618786), mRNA4e-33CO879993.2 Bt.18289.1.A1_at (12381 bases away)
11963:2625_42727175-B:rNM_000923Homo sapiens phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) (PDE4C), mRNAXM_602953PREDICTED: Bos taurus similar to cAMP-specific 3,5-cyclic phosphodiesterase 4C (DPDE1) (PDE21) (LOC524624), mRNA4e-33btcn4305, CK773032 Bt.25718.1.A1_at Bt.25718.1.A1_at
11964:1529_CL1Contig2-B:fNM_002866Homo sapiens RAB3A, member RAS oncogene family (RAB3A), mRNANM_174446Bos taurus RAB3A, member RAS oncogene family (RAB3A), mRNA4e-33btcn4277, DN528402, DN276316, btcn4278 Bt.2362.1.S1_at, Bt.387.1.S1_at Bt.2362.1.S1_at, Bt.387.1.S1_at Bt.2362.1.S1_at, Bt.387.1.S1_at Bt.2362.1.S1_at, Bt.387.1.S1_at
11965:1898_CL1Contig1-B:rNM_032683Homo sapiens hypothetical protein MGC12972 (FKSG24), mRNAXM_871114PREDICTED: Bos taurus similar to CG32262-PA (LOC618791), mRNA4e-33btcn7765.2, btcn4287.2, btcn4289 Bt.2362.1.S1_at (115 bases away) Bt.2362.1.S1_at (115 bases away) Bt.2362.1.S1_at (115 bases away)
11966:45360_CL581Contig1-A:fNM_153701, NM_005535Homo sapiens interleukin 12 receptor, beta 1 (IL12RB1), transcript variant 1, mRNAXM_602621PREDICTED: Bos taurus similar to Interleukin-12 receptor beta-1 chain precursor (IL-12R-beta1) (Interleukin-12 receptor beta) (IL-12 receptor beta component) (IL-12RB1) (LOC524299), mRNA4e-33btcn4297, btcn4295 Bt.26760.1.S1_at (47406 bases away) Bt.26760.1.S1_at (32685 bases away)
11967:2016_CL2Contig1-A:rNM_001025604Homo sapiens arrestin domain containing 2 (ARRDC2), transcript variant 2, mRNAXM_881458PREDICTED: Bos taurus similar to arrestin domain containing 2 isoform 2, transcript variant 3 (LOC523285), mRNA4e-33btcn4256, CR553652 Bt.26760.1.S1_at, Bt.26760.2.S1_a_at Bt.26760.2.S1_a_at (6271 bases away)
11968:2054_CL5Contig1-B:rNM_002248Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 (KCNN1), mRNAXM_881489PREDICTED: Bos taurus small conductance Ca2+-activated K+ channel type1, transcript variant 3 (KCNN1), mRNA4e-33btcn4303 Bt.26760.2.S1_a_at (8113 bases away)
11969:2883_CL1Contig1-A:rNM_138442Homo sapiens coiled-coil domain containing 124 (CCDC124), mRNANM_001038523Bos taurus similar to Y73E7A.1 (MGC133908), mRNA4e-33DV836144, btcn4261 Bt.26615.1.S1_at Bt.26615.1.S1_at
1196:1185_16743829-A:fNM_014911 (2206 bases away)Homo sapiens AP2 associated kinase 1 (AAK1), mRNAbtcn32356 (2659 bases away)
11972:17259_CL2Contig1-B:fNM_000453Homo sapiens solute carrier family 5 (sodium iodide symporter), member 5 (SLC5A5), mRNAXM_581578PREDICTED: Bos taurus similar to Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Sodium-iodide symporter) (Na(+)/I(-)-symporter) (LOC505310), mRNA4e-33btcn4294 Bt.27351.1.S1_at
11973:2376_CL1Contig1-B:rNR_001593Homo sapiens similar to ribosomal protein L18a; 60S ribosomal protein L18a (LOC390354) on chromosome 12XM_881558PREDICTED: Bos taurus similar to ribosomal protein L18a, transcript variant 4 (RPL18A), mRNA4e-33btcn4253, CK968607, btcn4254, btcn56308.1 Bt.4012.1.S1_at Bt.4012.1.S1_at Bt.4012.1.S1_at Bt.4012.1.S1_at
11974:25073_CL3Contig1-B:fNM_000215Homo sapiens Janus kinase 3 (a protein tyrosine kinase, leukocyte) (JAK3), mRNAXM_618476PREDICTED: Bos taurus similar to Janus kinase 3, transcript variant 1 (LOC538276), mRNA4e-33BI773836, btcn4266 Bt.12405.1.S1_at (306 bases away) Bt.12405.1.S1_at
11975:25073_CL1Contig1-A:fNM_005543Homo sapiens insulin-like 3 (Leydig cell) (INSL3), mRNANM_174365Bos taurus insulin-like 3 (Leydig cell) (INSL3), mRNA4e-33DT846654.1, DT838584, btcn4259, btcn4258 Bt.12186.1.S1_at Bt.12186.1.S1_at Bt.12186.1.S1_at Bt.12186.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11976:2265_CL1Contig1-A:f
11977:45360_CL508Contig1-B:fNM_015122Homo sapiens FCH domain only 1 (FCHO1), mRNAXM_581997PREDICTED: Bos taurus similar to FCH domain only 1 (LOC505672), mRNA4e-33DN524469, btcn4263, CK772007, btcn4264
11978:1327_CL4Contig1-B:rXM_605253PREDICTED: Bos taurus similar to Unc-13 homolog A (Munc13-1) (LOC526874), mRNA4e-27
11979:45360_CL78Contig2-B:fNM_024656Homo sapiens glycosyltransferase 25 domain containing 1 (GLT25D1), mRNAXM_590812PREDICTED: Bos taurus similar to glycosyltransferase 25 domain containing 1 (LOC513167), mRNA4e-33btcn4280 Bt.13351.1.S1_at, Bt.29548.1.A1_at
1197:17667_CL1Contig1-A:fNM_001012987Homo sapiens similar to BMP2 inducible kinase (DKFZp686K16132), mRNAbtcn32350 Bt.27124.1.S1_at (6684 bases away)
11980:45360_CL1042Contig1-B:fNM_173544Homo sapiens B-cell novel protein 1 (BCNP1), mRNAXM_593682PREDICTED: Bos taurus similar to B-cell novel protein 1 (LOC515629), mRNA1e-30btcn4250, btcn4252 Bt.23084.1.S1_at (11333 bases away) Bt.23084.1.S1_at (13115 bases away)
11981:10013_CL1Contig1-B:rNM_012088Homo sapiens 6-phosphogluconolactonase (PGLS), mRNANM_001038580Bos taurus similar to 6-phosphogluconolactonase (MGC134520), mRNA1e-30btcn4274, btcn4271 Bt.23084.1.S1_at Bt.23084.1.S1_at
11982:5708_CL5Contig1-B:rNM_198580Homo sapiens solute carrier family 27 (fatty acid transporter), member 1 (SLC27A1), mRNANM_001033625Bos taurus solute carrier family 27 (fatty acid transporter), member 1 (SLC27A1), mRNA4e-33btcn4247 Bt.6025.1.S1_at, Bt.6025.3.A1_at, Bt.6025.2.S1_at
11983:4790_61729632-A:fNM_138454 (9916 bases away)Homo sapiens thioredoxin-like 6 (TXNL6), mRNAXM_582699PREDICTED: Bos taurus hypothetical LOC506272 (LOC506272), mRNA4e-33CR851090, btcn4299 Bt.1293.1.S1_at (8156 bases away) Bt.1293.1.S1_at (6985 bases away)
11984:1606_CL1Contig3-B:rNM_138401Homo sapiens family with sequence similarity 125, member A (FAM125A), mRNANM_001034283Bos taurus hypothetical LOC507199 (MGC127521), mRNA1e-30btcn4267, btcn4269, btcn4270 Bt.1293.1.S1_at Bt.1293.1.S1_at Bt.1293.1.S1_at
11985:12926_CL3Contig1-B:rXM_613847PREDICTED: Bos taurus similar to RGM domain family, member B isoform 1 precursor (LOC540954), mRNA4e-33
11986:7175_CL31Contig1-B:rNM_001270Homo sapiens chromodomain helicase DNA binding protein 1 (CHD1), mRNAXM_875806PREDICTED: Bos taurus similar to chromodomain helicase DNA binding protein 1, transcript variant 6 (LOC505123), mRNA4e-33btcn29259, btcn29261 Bt.16314.1.S1_at (14592 bases away) Bt.16314.1.S1_at
11987:7175_CL48Contig1-B:fNM_001270Homo sapiens chromodomain helicase DNA binding protein 1 (CHD1), mRNAXM_875873PREDICTED: Bos taurus similar to chromodomain helicase DNA binding protein 1, transcript variant 7 (LOC505123), mRNA4e-33btcn29269 Bt.19645.1.A1_at
11988:756_CL1Contig1-B:fNM_175052, NM_005668Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 (ST8SIA4), transcript variant 1, mRNANM_001001163Bos taurus alpha-2,8-sialyltransferase 8D (SIAT8D), mRNA4e-33btcn14772 Bt.17789.1.A1_at
11989:19077_CL1Contig2-A:rNM_198507Homo sapiens transmembrane protein 157 (TMEM157), mRNAbtcn12606, btcn12605 Bt.21954.2.S1_at, Bt.21954.1.S1_at Bt.21954.2.S1_at
1198:18417_CL1Contig1-A:rNM_001002756, NM_015700, NM_001002755, NM_001002757Homo sapiens HIRA interacting protein 5 (HIRIP5), transcript variant 1, mRNAXM_867909PREDICTED: Bos taurus similar to HIRA interacting protein 5 isoform 2 (LOC615964), mRNA4e-33btcn32331 Bt.25072.1.S1_at
11990:44862_13932105-B:fXM_933457, XM_939054, XM_372046, XM_945266, XM_941557, XM_945268, NM_003290, XM_929130, XM_933453Homo sapiens tropomyosin 4 (TPM4), mRNAXM_615314PREDICTED: Bos taurus similar to tropomyosin 4, transcript variant 1 (LOC535277), mRNA1e-30btcn35697, btcn35696, btcn23728 Bt.9589.1.S1_at Bt.9589.1.S1_at (817 bases away) Bt.9589.1.S1_at (768 bases away)
11991:15444_CL1Contig1-B:rXM_587867PREDICTED: Bos taurus similar to hematopoietic SH2 domain containing, transcript variant 1 (LOC510693), mRNA4e-33
11992:9465_56938984-A:fXM_586026PREDICTED: Bos taurus similar to DNA-dependent protein kinase catalytic subunit-interacting protein 3 (LOC539263), mRNA4e-33
11993:7681_CL1Contig2-B:rXM_585437PREDICTED: Bos taurus similar to family with sequence similarity 32, member A, like, transcript variant 1 (LOC508634), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
11994:7681_CL3Contig3-B:rNM_032493Homo sapiens adaptor-related protein complex 1, mu 1 subunit (AP1M1), mRNAXM_882008PREDICTED: Bos taurus similar to adaptor-related protein complex 1, mu 1 subunit, transcript variant 16 (LOC504310), mRNA4e-33AV606109, CR552745, btcn35701 Bt.21426.1.S1_at (123 bases away) Bt.21426.1.S1_at Bt.21426.1.S1_at
11995:3883_42580191-A:fNM_173488 (68242 bases away)Homo sapiens solute carrier organic anion transporter family, member 6A1 (SLCO6A1), mRNAXM_606281PREDICTED: Bos taurus similar to solute carrier organic anion transporter family, member 4C1 (LOC527874), mRNA4e-33btcn33494 Bt.17510.1.A1_at (643099 bases away)
11996:3883_CL1Contig1-B:fNM_180991Homo sapiens solute carrier organic anion transporter family, member 4C1 (SLCO4C1), mRNAXM_615216PREDICTED: Bos taurus organic anion transporting polypeptide 4c1 (Slco4c1), mRNA3e-31btcn44838 Bt.25215.1.A1_at
11998:45360_163069-A:fNM_198904, NM_000816, NM_198903Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 2 (GABRG2), transcript variant 2, mRNANM_174545Bos taurus gamma-aminobutyric acid (GABA) A receptor, gamma 2 (GABRG2), mRNA4e-33btcn26934 Bt.408.1.S1_at
11999:16368_CL3Contig1-B:rNM_138766, NM_138822, NM_000919, NM_138821Homo sapiens peptidylglycine alpha-amidating monooxygenase (PAM), transcript variant 1, mRNANM_173948Bos taurus peptidylglycine alpha-amidating monooxygenase (PAM), mRNA4e-33btcn10839, CB446591, btcn10837, btcn10838, CB448287, DV835610, DT889369 Bt.12303.1.S1_at Bt.12303.1.S1_at Bt.17510.1.A1_at, Bt.12303.1.S1_at Bt.17510.1.A1_at, Bt.12303.1.S1_at Bt.12303.1.S1_at Bt.12303.1.S1_at Bt.12303.1.S1_at
1199:2304_CL3Contig1-A:rNM_002056Homo sapiens glutamine-fructose-6-phosphate transaminase 1 (GFPT1), mRNAXM_607420PREDICTED: Bos taurus glutamine-fructose-6-phosphate transaminase 1 (GFPT1), mRNA1e-30DN842495, btcn32337 Bt.723.1.S1_at Bt.13053.1.S1_at (2050 bases away)
119:12702_CL1Contig1-B:fNM_003741Homo sapiens chordin (CHRD), mRNAXM_587010PREDICTED: Bos taurus similar to Chordin precursor (LOC509942), mRNA4e-33btcn50059 Bt.1991.1.S1_at
11:20170_47689184-B:fNM_005534Homo sapiens interferon gamma receptor 2 (interferon gamma transducer 1) (IFNGR2), mRNAXM_592804PREDICTED: Bos taurus similar to interferon-gamma receptor beta chain precursor (LOC514889), mRNA4e-33CN793204, CK941541, CR853129, btcn48934, BE588962 Bt.4251.2.A1_at Bt.4251.2.A1_at Bt.4251.1.S1_at (38 bases away) Bt.4251.1.S1_at, Bt.4251.2.A1_at Bt.4251.1.S1_at (151 bases away)
12000:937_CL1Contig1-B:rNM_015216Homo sapiens Histidine acid phosphatase domain containing 1 (HISPPD1), mRNADN513088, btcn10844, btcn10846, btcn10847, DV780656, btcn10843 Bt.1993.1.S1_a_at, Bt.1993.3.A1_a_at Bt.1993.1.S1_a_at, Bt.1993.3.A1_a_at Bt.1993.1.S1_a_at, Bt.1993.3.A1_a_at Bt.1993.1.S1_a_at, Bt.1993.3.A1_a_at, Bt.1993.2.A1_at, Bt.8640.1.S1_at Bt.1993.3.A1_a_at, Bt.1993.2.A1_at Bt.1993.3.A1_a_at
12001:19641_28292649-A:fNM_033211Homo sapiens chromosome 5 open reading frame 30 (C5orf30), mRNAXM_582659PREDICTED: Bos taurus hypothetical LOC538782 (LOC538782), mRNA4e-33btcn4962 Bt.26041.1.A1_at
12002:28477_CL1Contig1-A:rXM_597771PREDICTED: Bos taurus similar to CG31772-PA (LOC519548), mRNA4e-33
12004:44849_CL3Contig1-A:fNM_022824Homo sapiens F-box and leucine-rich repeat protein 17 (FBXL17), mRNAXM_601804PREDICTED: Bos taurus similar to F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat protein 17) (F-box only protein 13) (LOC523504), mRNA4e-33CB455507, CB456883 Bt.3018.1.A1_at, Bt.19126.1.A1_at Bt.3018.1.A1_at, Bt.19126.1.A1_at
12008:1156_CL4Contig1-A:fXM_868848PREDICTED: Bos taurus similar to Ephrin-A5 precursor (EPH-related receptor tyrosine kinase ligand 7) (LERK-7) (AL-1) (LOC616742), mRNA1e-30
1200:30511_9932621-A:rNM_053034, NM_032208, NM_018153Homo sapiens anthrax toxin receptor 1 (ANTXR1), transcript variant 3, mRNAXM_867970PREDICTED: Bos taurus similar to tumor endothelial marker 8 isoform 1 precursor (LOC616010), mRNA4e-33btcn32351 Bt.21981.2.S1_at (1112 bases away)
12010:39719_CL4Contig1-A:rXM_599191PREDICTED: Bos taurus similar to Kruppel-like factor 2 (lung) (LOC520939), mRNA4e-33
12011:23061_CL4Contig1-B:fNM_021235Homo sapiens epidermal growth factor receptor pathway substrate 15-like 1 (EPS15L1), mRNAXM_872102PREDICTED: Bos taurus similar to epidermal growth factor receptor pathway substrate 15-like 1, transcript variant 8 (LOC506374), mRNA6e-29btcn44871, btcn44872 Bt.19017.1.A1_at, Bt.11266.2.S1_s_at, Bt.26246.1.A1_at Bt.11266.2.S1_s_at (17546 bases away)
12012:23061_CL6Contig1-B:fNM_145046, NM_032207Homo sapiens chromosome 19 open reading frame 44 (C19orf44), mRNANM_001038514Bos taurus calreticulin 3 (CALR3), mRNA4e-33btcn44898 Bt.6570.2.S1_at (24212 bases away)
12013:23164_15961719-A:fNM_021235, NM_032207Homo sapiens epidermal growth factor receptor pathway substrate 15-like 1 (EPS15L1), mRNAXM_585456PREDICTED: Bos taurus hypothetical LOC508648 (LOC508648), mRNA4e-27btcn44872 Bt.11266.2.S1_s_at (17546 bases away)
12014:23164_17995862-A:fNM_032207Homo sapiens chromosome 19 open reading frame 44 (C19orf44), mRNAXM_585456PREDICTED: Bos taurus hypothetical LOC508648 (LOC508648), mRNA6e-29btcn44912 Bt.6570.2.S1_at (324 bases away)
12016:43475_56143042-A:rNM_024104Homo sapiens chromosome 19 open reading frame 42 (C19orf42), mRNAXM_864213PREDICTED: Bos taurus hypothetical protein LOC613429, transcript variant 1 (LOC613429), mRNA2e-32btcn44892.1, DV838748, btcn44892, btcn44893 Bt.21840.1.S1_at (197 bases away) Bt.21840.1.S1_at (267 bases away) Bt.21840.1.S1_at Bt.21840.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12017:9762_CL1Contig1-B:fNM_024074Homo sapiens transmembrane protein 38A (TMEM38A), mRNAXM_611947PREDICTED: Bos taurus similar to transmembrane protein 38A (LOC532775), mRNA4e-33btcn44902 Bt.1310.1.S1_at
12019:37914_51820174-A:fNM_001007525Homo sapiens hypothetical protein LOC284434 (LOC284434), mRNAXM_618189PREDICTED: Bos taurus similar to T05C3.2 (LOC537999), mRNA4e-33btcn44903 Bt.7030.1.S1_at (53667 bases away)
1201:20035_CL1Contig1-B:rNM_019617Homo sapiens gastrokine 1 (GKN1), mRNANM_001001148Bos taurus foveolin precursor (FOV), mRNA4e-33btcn32368 Bt.29019.1.S1_at
12020:42520_CL1Contig1-B:rNM_015260Homo sapiens SIN3 homolog B, transcription regulator (yeast) (SIN3B), mRNAXM_598751PREDICTED: Bos taurus similar to SIN3 homolog B, transcription regulator (LOC520505), mRNA4e-33btcn44899, btcn44900 Bt.7030.1.S1_at (6155 bases away) Bt.7030.1.S1_at (9496 bases away)
12021:9991_45071727-A:fNM_003950Homo sapiens coagulation factor II (thrombin) receptor-like 3 (F2RL3), mRNAXM_583942PREDICTED: Bos taurus similar to Proteinase activated receptor 4 precursor (PAR-4) (Thrombin receptor-like 3) (Coagulation factor II receptor-like 3) (LOC538963), mRNA4e-33btcn44901 Bt.7634.1.S1_at (2171 bases away)
12022:12558_6955942-B:fNM_015692Homo sapiens C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (CPAMD8), mRNAXM_609516PREDICTED: Bos taurus similar to C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (LOC531032), mRNA4e-33btcn44913 Bt.7634.1.S1_at (33922 bases away)
12023:12317_49145538-A:fNM_198887Homo sapiens nucleoporin 43kDa (NUP43), transcript variant 1, mRNAXM_598409PREDICTED: Bos taurus similar to Nucleoporin Nup43 (p42) (LOC520174), mRNA6e-29btcn2511 Bt.24223.1.S1_at
12024:947_CL4Contig1-B:rNM_004690Homo sapiens LATS, large tumor suppressor, homolog 1 (Drosophila) (LATS1), mRNAXM_877708PREDICTED: Bos taurus similar to LATS homolog 1, transcript variant 11 (LOC535935), mRNA4e-33btcn2510 Bt.2105.1.S1_at, Bt.7527.2.S1_at, Bt.2105.2.A1_at, Bt.7527.1.S1_at
12025:33693_60974048-A:rNM_007044 (63 bases away)Homo sapiens katanin p60 (ATPase-containing) subunit A 1 (KATNA1), mRNAbtcn2516, DN530226 Bt.2105.1.S1_at (7934 bases away) Bt.2105.1.S1_at (15077 bases away)
12026:3985_CL1Contig2-B:fNM_014819Homo sapiens praja 2, RING-H2 motif containing (PJA2), mRNAXM_877832PREDICTED: Bos taurus similar to praja 2, RING-H2 motif containing, transcript variant 3 (LOC511508), mRNA4e-33DN818312, AJ672653, btcn3794 Bt.17496.2.A1_at, Bt.17496.1.S1_at Bt.17496.2.A1_at, Bt.17496.1.S1_at Bt.17496.2.A1_at, Bt.17496.1.S1_at, Bt.1571.1.S1_at
12027:11790_CL3Contig1-B:rNM_002372Homo sapiens mannosidase, alpha, class 2A, member 1 (MAN2A1), mRNAXM_599803PREDICTED: Bos taurus similar to mannosidase, alpha, class 2A, member 1 (LOC521539), mRNA4e-33btcn3796 Bt.13587.1.S1_at, Bt.13587.2.S1_a_at
12029:12966_CL1Contig1-A:rNM_001039763 (196944 bases away)Homo sapiens hypothetical protein LOC642986 (FLJ43080), mRNAbtcn3800 Bt.20888.1.S1_at
1202:15584_CL1Contig1-B:rNM_182536Homo sapiens blottin (GDDR), mRNAXM_589433PREDICTED: Bos taurus hypothetical LOC512001, transcript variant 1 (LOC512001), mRNA4e-33btcn32366, CK963540, btcn32364 Bt.29262.1.S1_at, Bt.29353.1.S1_at Bt.29262.1.S1_at, Bt.29353.1.S1_at Bt.29353.1.S1_at
12030:2711_CL1Contig1-B:fXM_584954PREDICTED: Bos taurus similar to Rho-GTPase-activating protein 4 (Rho-GAP hematopoietic protein C1) (p115), transcript variant 1 (LOC508209), mRNA4e-33
12031:16764_CL2Contig2-B:fXM_864626PREDICTED: Bos taurus similar to N-terminal acetyltransferase complex ARD1 subunit homolog (LOC613636), mRNA4e-33
12032:14274_42581462-B:rXM_594363PREDICTED: Bos taurus similar to N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) (N-acetyl-D-glucosamine 2-epimerase) (AGE) (Renin-binding protein) (RnBP) (LOC516214), mRNA3e-28
12033:29032_CL1Contig1-B:rNM_005334Homo sapiens host cell factor C1 (VP16-accessory protein) (HCFC1), mRNAXM_590515PREDICTED: Bos taurus similar to Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory protein) (VCAF) (CFF) (LOC512908), mRNA4e-33btcn19898 Bt.27246.1.A1_at
12034:38632_CL1Contig1-A:fNM_003492Homo sapiens chromosome X open reading frame 12 (CXorf12), mRNAXM_864356PREDICTED: Bos taurus similar to ITBA1 protein (CXorf12 protein) (DXS9878E), transcript variant 2 (LOC508380), mRNA4e-33btcn19892 Bt.8147.1.S1_at
12035:45360_17889256-A:fNM_001025242 (6197 bases away)Homo sapiens interleukin-1 receptor-associated kinase 1 (IRAK1), transcript variant 2, mRNAbtcn19884 (4912 bases away)
12036:6530_CL1Contig1-B:fXM_927095, NM_020061, NM_000513Homo sapiens opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) (OPN1MW), mRNANM_174566Bos taurus opsin 1 (cone pigments), long-wave-sensitive (color blindness, protan) (OPN1LW), mRNA4e-33btcn19900 Bt.15974.1.S1_s_at, Bt.7217.1.S1_at, Bt.15974.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12038:3934_9723286-B:fXM_927078 (34463 bases away)PREDICTED: Homo sapiens similar to chromosome X open reading frame 2 (LOC653363), mRNAXM_584141PREDICTED: Bos taurus similar to transketolase (LOC507517), mRNA4e-33btcn19889 Bt.24549.1.A1_at
12039:12202_CL5Contig1-A:rNM_173483 (3348 bases away)Homo sapiens cytochrome P450, family 2, subfamily E, polypeptide 2 homolog (FLJ39501), mRNAXM_865087PREDICTED: Bos taurus similar to Cytochrome P450 4F11 (CYPIVF11) (LOC613892), partial mRNA1e-30btcn17005 Bt.18323.1.A1_at (15749 bases away)
1203:1412_CL1Contig1-B:fNM_017880Homo sapiens chromosome 2 open reading frame 42 (C2orf42), mRNANM_001034714Bos taurus similar to CG2321-PA (MGC127654), mRNA2e-32btcn1323 Bt.27080.1.A1_at (21587 bases away)
12040:12202_CL5Contig2-B:rXM_929510, NM_007253, NM_021187, XM_937627, NM_023944Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 8 (CYP4F8), mRNANM_001035042Bos taurus cytochrome P450, family 4, subfamily F, polypeptide 2 (CYP4F2), mRNA4e-33btcn16974 Bt.28918.1.A1_at
12042:12202_CL10Contig1-B:fNM_021187 (19232 bases away)Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 11 (CYP4F11), mRNAXM_614912PREDICTED: Bos taurus similar to Cytochrome P450 4F6 (CYPIVF6), transcript variant 1 (LOC534967), mRNA4e-33btcn16995 Bt.25655.2.A1_at
12043:27178_CL1Contig1-B:fNM_052890Homo sapiens peptidoglycan recognition protein 2 (PGLYRP2), mRNAXM_588006PREDICTED: Bos taurus similar to N-acetylmuramoyl-L-alanine amidase precursor (Peptidoglycan recognition protein long) (PGRP-L) (Peptidoglycan recognition protein 2) (LOC510803), mRNA3e-28btcn17004 Bt.25655.2.A1_at (78686 bases away)
12044:42948_CL1Contig1-B:fXM_029084 (528 bases away)PREDICTED: Homo sapiens hypothetical protein FLJ21438 (FLJ21438), mRNAXM_591009PREDICTED: Bos taurus similar to DAB2 interacting protein isoform 2 (LOC540027), mRNA1e-14btcn16996, btcn16997 Bt.26984.2.S1_at (22125 bases away) Bt.26984.2.S1_at (22544 bases away)
12045:21445_CL1Contig1-B:fXM_934817, XM_944975, XM_941097, XM_944977, XM_372716, XM_944974, XM_934815, XM_930438PREDICTED: Homo sapiens widely-interspaced zinc finger motifs, transcript variant 1 (WIZ), mRNAXM_615212PREDICTED: Bos taurus similar to widely-interspaced zinc finger motifs isoform 2 (LOC535200), mRNA4e-33btcn16990 Bt.26984.1.A1_at, Bt.26984.2.S1_at
12046:37754_CL2Contig1-B:rNM_014371Homo sapiens A kinase (PRKA) anchor protein 8-like (AKAP8L), mRNAXM_874172PREDICTED: Bos taurus similar to A-kinase anchor protein-like protein 8 (Neighbor of A-kinase anchoring protein 95), transcript variant 5 (LOC539700), mRNA4e-33btcn16985, btcn16987 Bt.4892.1.A1_at, Bt.17843.1.A1_at Bt.4892.1.A1_at, Bt.26984.1.A1_at, Bt.17843.1.A1_at
12047:37754_CL1Contig1-B:rNM_014371Homo sapiens A kinase (PRKA) anchor protein 8-like (AKAP8L), mRNAXM_873990PREDICTED: Bos taurus similar to A-kinase anchor protein-like protein 8 (Neighbor of A-kinase anchoring protein 95), transcript variant 4 (LOC539700), mRNA4e-33btcn16985, CR851832, btcn16987, DY164439 Bt.4892.1.A1_at, Bt.17843.1.A1_at Bt.17843.1.A1_at Bt.4892.1.A1_at, Bt.26984.1.A1_at, Bt.17843.1.A1_at Bt.17843.1.A1_at
12048:37754_CL5Contig1-B:rNM_005858Homo sapiens A kinase (PRKA) anchor protein 8 (AKAP8), mRNAXM_601194PREDICTED: Bos taurus similar to A-kinase anchor protein 8, transcript variant 5 (LOC522905), mRNA4e-33btcn16999 Bt.17843.1.A1_at (3341 bases away)
12049:37754_CL4Contig1-B:rNM_005858 (47 bases away)Homo sapiens A kinase (PRKA) anchor protein 8 (AKAP8), mRNAXM_601194PREDICTED: Bos taurus similar to A-kinase anchor protein 8, transcript variant 5 (LOC522905), mRNA4e-33btcn16984 Bt.14084.1.A1_at, Bt.25210.1.A1_at
1204:4070_29223452-B:fXM_878375PREDICTED: Bos taurus similar to TIA1 protein isoform 2, transcript variant 15 (LOC538533), mRNA4e-33
12050:1625_CL2Contig3-B:fNM_014299, NM_058243Homo sapiens bromodomain containing 4 (BRD4), transcript variant short, mRNAXM_875586PREDICTED: Bos taurus similar to bromodomain-containing protein 4 isoform short, transcript variant 15 (LOC513704), mRNA4e-33btcn16976 Bt.17552.1.A1_at, Bt.21129.1.A1_at
12051:1625_51817231-A:fNM_058243Homo sapiens bromodomain containing 4 (BRD4), transcript variant long, mRNAXM_865372PREDICTED: Bos taurus similar to bromodomain-containing protein 4 isoform long (LOC614048), mRNA4e-33btcn16994 Bt.9905.1.S1_at
12052:16894_CL1Contig1-B:rNM_033025Homo sapiens synapse defective 1, Rho GTPase, homolog 1 (C. elegans) (SYDE1), mRNAbtcn50553 Bt.5929.2.S1_at, Bt.5929.1.S1_at
12053:4586_CL1Contig3-B:rNM_006844, NM_176826Homo sapiens ilvB (bacterial acetolactate synthase)-like (ILVBL), transcript variant 1, mRNANM_001015535Bos taurus ilvB (bacterial acetolactate synthase)-like (ILVBL), mRNA4e-33btcn50550, CK948937 Bt.24640.1.S1_at Bt.24640.1.S1_at (7300 bases away)
12054:8315_CL1Contig1-A:fNM_004146Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa (NDUFB7), nuclear gene encoding mitochondrial protein, mRNANM_176660Bos taurus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa (NDUFB7), mRNA4e-33btcn35852, btcn35851 Bt.64.1.S1_at Bt.64.1.S1_at
12055:1190_CL1Contig1-B:fNM_138501Homo sapiens glycoprotein, synaptic 2 (GPSN2), mRNANM_001034748Bos taurus glycoprotein, synaptic 2 (GPSN2), mRNA4e-33btcn35848, btcn35849, btcn35850 Bt.7701.1.S1_at Bt.7701.1.S1_at Bt.7701.1.S1_at
12056:10828_CL2Contig1-B:rNM_006145Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 1 (DNAJB1), mRNANM_001033763Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 1 (DNAJB1), mRNA4e-33btcn35829, btcn35830 Bt.17367.1.S1_at Bt.17367.1.S1_at, Bt.28288.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12057:449_CL2Contig1-B:fNM_202470, NM_202469, NM_202468, NM_202494, NM_202467, NM_005716Homo sapiens GIPC PDZ domain containing family, member 1 (GIPC1), transcript variant 1, mRNAXM_876582PREDICTED: Bos taurus similar to regulator of G-protein signaling 19 interacting protein 1, transcript variant 4 (LOC519617), mRNA4e-24btcn35868 Bt.4993.1.S1_at (6619 bases away)
12058:38019_CL1Contig2-B:fNM_213560, NM_002741Homo sapiens protein kinase N1 (PKN1), transcript variant 2, mRNAXM_585967PREDICTED: Bos taurus similar to protein kinase N1 isoform 1 (LOC509080), mRNA4e-33btcn35841, CB462006, DT901104, BM255240, btcn35842, btcn35840 Bt.4993.1.S1_at Bt.4993.1.S1_at Bt.4993.1.S1_at Bt.4993.1.S1_at Bt.4993.1.S1_at Bt.4993.1.S1_at
12059:825_CL2Contig4-B:rNM_005804Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (DDX39), mRNANM_001034752Bos taurus DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 isoform 1 (DDX39), mRNA4e-33btcn35836, btcn35837 Bt.29896.1.S1_at, Bt.20367.1.S1_at, Bt.5200.1.S1_at Bt.29896.1.S1_at, Bt.20367.1.S1_at, Bt.5200.1.S1_at
1205:2916_CL1Contig1-B:fNM_016297Homo sapiens prenylcysteine oxidase 1 (PCYOX1), mRNAXM_581553PREDICTED: Bos taurus similar to prenylcysteine oxidase 1 (LOC538623), mRNA4e-33btcn1325 Bt.16139.1.A1_at, Bt.28691.1.S1_at
12060:21836_CL2Contig1-B:fNM_001008701, NM_014921Homo sapiens latrophilin 1 (LPHN1), transcript variant 2, mRNAbtcn35845, DN532183, btcn35844 Bt.13181.2.S1_at, Bt.13181.2.S2_at Bt.13181.2.S1_at, Bt.13181.2.S2_at Bt.13181.2.S1_at, Bt.13181.2.S2_at, Bt.27855.1.S1_at
12061:18149_CL1Contig2-A:fXM_944181, XR_000922, XM_933775, XM_942899, XM_944666, NM_004843, XR_000921, XM_942891, XM_939484, XM_944188, XM_945323, XM_945318, XM_208072, XM_932689, XM_945129, XM_934381, XM_932910, XR_000923PREDICTED: Homo sapiens similar to ribosomal protein L13a; 60S ribosomal protein L13a; 23 kD highly basic protein, transcript variant 1 (LOC387930), misc RNAbtcn35862, btcn35864 Bt.23364.1.A1_at Bt.23364.1.A1_at
12062:5592_10759116-A:fNM_080864 (34382 bases away)Homo sapiens relaxin 3 (RLN3), mRNAXM_598968PREDICTED: Bos taurus similar to MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C) (LOC520718), mRNA4e-33BF042061 Bt.23364.1.A1_at (38204 bases away)
12064:5592_24334647-A:fNM_002918Homo sapiens regulatory factor X, 1 (influences HLA class II expression) (RFX1), mRNAXM_598968PREDICTED: Bos taurus similar to MHC class II regulatory factor RFX1 (RFX) (Enhancer factor C) (EF-C) (LOC520718), mRNA4e-33btcn35858 Bt.11175.1.S1_at (124 bases away)
12065:25873_CL1Contig1-B:fXM_934755, XM_934758, XM_934754, XM_940629, XM_934753, XM_934759, XM_944692, XM_944703, XM_944713, NM_138353, XM_944698, XM_930418, XM_944711Homo sapiens hypothetical protein BC002926 (LOC90379), mRNANM_001034685Bos taurus hypothetical LOC539970 (MGC128405), mRNA4e-33btcn35854, btcn35853 Bt.11175.1.S1_at Bt.11175.1.S1_at
12066:18811_10165893-A:fNM_024825 (804 bases away)Homo sapiens podocan-like 1 (PODNL1), mRNAXM_614353PREDICTED: Bos taurus similar to Fibromodulin precursor (FM) (Collagen-binding 59 kDa protein) (Keratan sulfate proteoglycan fibromodulin) (KSPG fibromodulin) (LOC534549), mRNA1e-14btcn35874 Bt.11175.1.S1_at (38247 bases away)
12067:4966_CL2Contig2-B:rNM_017721Homo sapiens coiled-coil and C2 domain containing 1A (CC2D1A), mRNAXM_877616PREDICTED: Bos taurus similar to putative NFkB activating protein, transcript variant 4 (LOC513078), mRNA4e-33btcn35846, btcn35847 Bt.11175.1.S1_at (40286 bases away) Bt.11175.1.S1_at (39639 bases away)
12068:15535_CL1Contig1-B:fNM_024323 (160 bases away)Homo sapiens chromosome 19 open reading frame 57 (C19orf57), mRNAbtcn35873 Bt.11175.1.S1_at (71242 bases away)
12069:4334_CL1Contig1-A:rXR_001405, XR_001406, XR_000986, XR_000985PREDICTED: Homo sapiens nanos homolog 3 (Drosophila), transcript variant 1 (NANOS3), misc RNAXM_601672PREDICTED: Bos taurus similar to nanos homolog 3 (LOC523375), mRNA4e-33btcn35865 Bt.11175.1.S1_at (80822 bases away)
1206:1628_CL1Contig1-B:fNM_016297 (5741 bases away)Homo sapiens prenylcysteine oxidase 1 (PCYOX1), mRNANM_001040543Bos taurus small nuclear ribonucleoprotein polypeptide G (SNRPG), mRNA4e-33CK961703, btcn22398.1, btcn34072.1, btcn1329 Bt.9750.2.S1_a_at Bt.9750.2.S1_a_at Bt.9750.2.S1_a_at Bt.9750.2.S1_a_at, Bt.28691.1.S1_at
12070:1086_CL1Contig1-B:fNM_030818Homo sapiens coiled-coil domain containing 130 (CCDC130), mRNAXM_866416PREDICTED: Bos taurus similar to CG15084-PA (LOC614791), mRNA4e-33btcn18423, btcn35870, btcn18422 Bt.1984.1.S1_at Bt.1984.1.S1_at (2614 bases away) Bt.1984.1.S1_at
12071:9007_CL1Contig1-B:rNM_001031727, NM_032285Homo sapiens hypothetical protein MGC3207 (MGC3207), transcript variant 2, mRNAXM_614606PREDICTED: Bos taurus similar to CG11334-PB, isoform B, transcript variant 1 (LOC534734), mRNA4e-33btcn18419 Bt.10874.1.S1_at
12072:10170_CL1Contig1-B:rNM_001031727 (6816 bases away)Homo sapiens hypothetical protein MGC3207 (MGC3207), transcript variant 1, mRNAXM_866431PREDICTED: Bos taurus similar to Leydig cell tumor 10 kDa protein homolog (LOC614800), mRNA4e-33btcn18420 Bt.23596.1.S1_at
12073:9772_CL1Contig1-B:fNM_023072Homo sapiens zinc finger, SWIM-type containing 4 (ZSWIM4), mRNAbtcn18424 Bt.28234.1.S1_at
12074:45360_9748387-B:fXM_944195, XM_938476, XM_942725, NM_001013691, NM_021030, NM_153358, XM_371139, NM_033213, XM_375568, XM_939522, NM_144976, XM_936933, NM_144566, NM_024106, NM_145233, XM_930343, XM_936858, NM_152289, XM_929783, NM_003437, NM_152601, NM_021143, XM_930581, NM_152476, XM_930351, NM_145276, NM_005815, NM_182524, XM_939396, NM_001012753, XM_934689, NM_152262Homo sapiens zinc finger protein 136 (ZNF136), mRNAAV612717 Bt.2229.1.S1_at
12075:6175_CL1Contig2-B:rNM_000528 (19 bases away)Homo sapiens mannosidase, alpha, class 2B, member 1 (MAN2B1), mRNANM_174561Bos taurus mannosidase, alpha, class 2B, member 1 (MAN2B1), mRNA4e-33btcn41909 Bt.4622.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12076:7161_CL1Contig1-B:rNM_016145Homo sapiens chromosome 19 open reading frame 56 (C19orf56), mRNAXM_585558PREDICTED: Bos taurus similar to UPF0139 protein CGI-140, transcript variant 1 (LOC508733), mRNA4e-33btcn41880, btcn41890, btcn41891 Bt.17344.1.S1_at Bt.17344.1.S1_at Bt.17344.1.S1_at
12077:4762_CL1Contig4-B:fNM_032332Homo sapiens mitogen-activated protein kinase organizer 1 (MORG1), mRNADV874839, CK776690, btcn41893, btcn41883, btcn41882, DV795633, btcn41891, DV796301, btcn41881 Bt.3902.1.S1_at (41 bases away) Bt.3902.1.S1_at (2915 bases away) Bt.3902.1.S1_at Bt.3902.1.S1_at (2908 bases away) Bt.3902.1.S1_at (2920 bases away) Bt.3902.1.S1_at (52 bases away) Bt.17344.1.S1_at Bt.3902.1.S1_at (2905 bases away) Bt.3902.1.S1_at (1484 bases away)
12078:24609_CL1Contig1-B:fNM_001038151Bos taurus similar to F-box/WD-repeat protein 9 (F-box and WD-40 domain protein 9) (MGC134310), mRNA4e-33
12079:90_9599377-B:fXM_866623PREDICTED: Bos taurus similar to transportin 2 (importin 3, karyopherin beta 2b), transcript variant 2 (LOC504589), mRNA4e-33
1207:4064_CL8Contig1-A:fXR_000591, XR_001435PREDICTED: Homo sapiens calpain 14 (CAPN14), misc RNAXM_593815PREDICTED: Bos taurus similar to Calpain-2 catalytic subunit (Calpain-2 large subunit) (Calcium-activated neutral proteinase 2) (CANP 2) (Calpain M-type) (M-calpain) (Millimolar-calpain) (Calpain large polypeptide L2) (LOC515741), mRNA4e-33btcn1342 Bt.25839.1.A1_at (3244 bases away)
12080:16562_CL1Contig1-B:rNM_024038Homo sapiens chromosome 19 open reading frame 43 (C19orf43), mRNAXM_580734PREDICTED: Bos taurus similar to RIKEN cDNA 2310036O22 (LOC504587), mRNA4e-33btcn41903, btcn41905, btcn41904 Bt.4100.1.S1_at Bt.4100.1.S1_at Bt.4100.1.S1_at
12081:22455_CL1Contig4-B:fNM_004317Homo sapiens arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) (ASNA1), mRNAXM_580733PREDICTED: Bos taurus similar to arsA (bacterial) arsenite transporter, ATP-binding, homolog 1, transcript variant 2 (LOC504586), mRNA4e-33btcn41908, btcn41906, btcn41907, BI847384, AV592357 Bt.20675.1.S1_at (1516 bases away) Bt.20675.1.S1_at Bt.20675.1.S1_at Bt.20675.1.S1_at Bt.20675.1.S1_at (1849 bases away)
12082:16243_CL1Contig1-B:fNM_017682Homo sapiens vitelliform macular dystrophy 2-like 1 (VMD2L1), mRNAXM_607911PREDICTED: Bos taurus similar to Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1) (LOC529463), mRNA4e-33btcn41939 Bt.20675.1.S1_at (4174 bases away)
12083:2905_CL1Contig2-B:fNM_013312Homo sapiens hook homolog 2 (Drosophila) (HOOK2), mRNAbtcn41936 Bt.20294.1.S1_at, Bt.20294.2.S1_at
12084:1558_CL3Contig1-A:rNM_002229Homo sapiens jun B proto-oncogene (JUNB), mRNAXM_592063PREDICTED: Bos taurus similar to Transcription factor jun-B (LOC514246), mRNA4e-33btcn41921, AJ814988 Bt.20542.1.S1_at Bt.20542.1.S1_at
12085:1766_CL1Contig4-B:fNM_181738 (691 bases away)Homo sapiens peroxiredoxin 2 (PRDX2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNANM_174763Bos taurus peroxiredoxin 2 (PRDX2), mRNA4e-33BP108796, btcn41896, btcn41894 Bt.2689.1.S1_at Bt.2689.1.S1_at Bt.2689.1.S1_at
12086:27936_CL1Contig1-B:rNM_006397Homo sapiens ribonuclease H2, subunit A (RNASEH2A), mRNANM_001038534Bos taurus similar to ribonuclease H2, large subunit (MGC134067), mRNA4e-33btcn41928, btcn41923, btcn41926, btcn41925, btcn41924 Bt.20248.1.S1_at Bt.20248.1.S1_at Bt.20248.1.S1_at Bt.20248.1.S1_at Bt.20248.1.S1_at
12088:45360_CL399Contig1-A:rNM_014975Homo sapiens microtubule associated serine/threonine kinase 1 (MAST1), mRNAXM_589702PREDICTED: Bos taurus similar to microtubule associated serine/threonine kinase 1 (LOC539825), mRNA4e-33btcn41931 Bt.1240.1.S1_at (197 bases away)
12089:37024_CL1Contig3-A:rNM_014975 (490 bases away)Homo sapiens microtubule associated serine/threonine kinase 1 (MAST1), mRNAXM_879219PREDICTED: Bos taurus deoxyribonuclease II, lysosomal, transcript variant 5 (DNASE2), mRNA2e-23btcn41915, btcn41917 Bt.1240.1.S1_at Bt.1240.1.S1_at
12090:39719_CL5Contig1-B:rNM_006563Homo sapiens Kruppel-like factor 1 (erythroid) (KLF1), mRNAbtcn41941 Bt.1240.1.S1_at (2630 bases away)
12092:13769_CL1Contig1-B:rNM_013976, NM_000159Homo sapiens glutaryl-Coenzyme A dehydrogenase (GCDH), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_582740PREDICTED: Bos taurus similar to Glutaryl-CoA dehydrogenase, mitochondrial precursor (GCD) (LOC506310), mRNA4e-33DY049886, btcn41902, btcn41900 Bt.16325.1.A1_at Bt.16325.1.A1_at, Bt.7276.1.S1_at, Bt.8808.1.S1_at Bt.16325.1.A1_at, Bt.7276.1.S1_at, Bt.8808.1.S1_at
12093:13757_CL1Contig1-B:rNM_004461Homo sapiens phenylalanine-tRNA synthetase-like, alpha subunit (FARSLA), mRNAXM_879308PREDICTED: Bos taurus similar to Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (PheRS) (CML33), transcript variant 3 (LOC522024), mRNA4e-33CB167823, btcn41899, btcn41898 Bt.21727.1.S1_at Bt.21727.1.S1_at Bt.21727.1.S1_at
12094:23061_CL1Contig3-B:rNM_004343Homo sapiens calreticulin (CALR), mRNANM_174000Bos taurus calreticulin (CALR), mRNA1e-30btcn41877, btcn41875, btcn41876.1, btcn41876, btcn41878, CX737845, DV786882, CB436182 Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at Bt.7676.2.S1_a_at
12095:35554_CL1Contig2-B:rNM_005053Homo sapiens RAD23 homolog A (S. cerevisiae) (RAD23A), mRNAXM_879696PREDICTED: Bos taurus similar to UV excision repair protein RAD23 homolog A (hHR23A), transcript variant 6 (LOC540564), mRNA4e-33btcn41920, btcn41918, CB459911 Bt.5135.1.S1_at, Bt.23124.1.A1_s_at Bt.5135.1.S1_at, Bt.23124.1.A1_s_at, Bt.9114.1.A1_at Bt.5135.1.S1_at, Bt.23124.1.A1_s_at
12096:32194_CL1Contig1-A:rNM_052850Homo sapiens growth arrest and DNA-damage-inducible, gamma interacting protein 1 (GADD45GIP1), mRNAXM_580882PREDICTED: Bos taurus similar to growth arrest and DNA-damage-inducible, gamma interacting protein 1 (LOC504718), mRNA4e-33btcn41930 Bt.18352.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12097:2007_CL3Contig1-B:fNM_005071 (28 bases away)Homo sapiens solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 (SLC1A6), mRNAXM_581923PREDICTED: Bos taurus similar to solute carrier family 1 member 6, transcript variant 1 (LOC538673), mRNA4e-33btcn41935
12098:25995_CL1Contig1-B:rNM_023035, NM_000068Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A subunit (CACNA1A), transcript variant 1, mRNAXM_613176PREDICTED: Bos taurus calcium channel, voltage-dependent, P/Q type, alpha 1A subunit (CACNA1A), partial mRNA4e-33btcn41944, CO877721 Bt.13071.2.A1_at, Bt.13071.2.S1_at Bt.13071.2.A1_at, Bt.13071.2.S1_at
12099:32575_CL4Contig2-B:rNM_025158 (21 bases away)Homo sapiens RUN and FYVE domain containing 1 (RUFY1), transcript variant 1, mRNAXM_606565PREDICTED: Bos taurus similar to RUN and FYVE domain-containing 1 (LOC528153), mRNA4e-33btcn50353.129, btcn54597, btcn5112.156 Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.2505.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.17634.1.A1_at Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at
12100:32575_CL2Contig6-B:fNM_005520Homo sapiens heterogeneous nuclear ribonucleoprotein H1 (H) (HNRPH1), mRNAXM_876996PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein H1, transcript variant 29 (LOC541202), mRNA4e-33btcn54579, DV795935, btcn54584, btcn54581, btcn50353.129, btcn54582, DY037439, btcn54576, btcn5112.156, btcn54575, DT816284, btcn54578 Bt.12859.1.S1_at Bt.12859.1.S1_at Bt.12859.1.S1_at Bt.12859.1.S1_at Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.12859.1.S1_at Bt.12859.1.S1_at Bt.12859.1.S1_at Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.12859.1.S1_at Bt.12859.1.S1_at Bt.12859.1.S1_at
12101:14225_CL5Contig1-A:fNM_145867Homo sapiens leukotriene C4 synthase (LTC4S), mRNAXM_877137PREDICTED: Bos taurus similar to leukotriene C4 synthase isoform 1, transcript variant 3 (LOC511749), mRNA4e-33btcn54608, btcn50353.129, btcn54609, btcn5112.156 Bt.9192.1.A1_at (1294 bases away) Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.9192.1.A1_at (1298 bases away) Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at
12102:2936_CL1Contig3-B:fNM_054013, NM_014275Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B (MGAT4B), transcript variant 1, mRNAXM_604619PREDICTED: Bos taurus similar to N-acetylglucosaminyltransferase IVb (LOC526256), mRNA4e-33btcn50353.129, btcn54594, btcn54595, btcn54593, btcn54592, CR850768, DN541514, btcn5112.156, CO877530 Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.9192.1.A1_at Bt.9192.1.A1_at Bt.9192.1.A1_at Bt.9192.1.A1_at Bt.9192.1.A1_at Bt.9192.1.A1_at Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.9192.1.A1_at (68 bases away)
12103:11526_CL1Contig1-B:fNM_003900Homo sapiens sequestosome 1 (SQSTM1), mRNANM_176641Bos taurus sequestosome 1 (SQSTM1), mRNA4e-33btcn54590, DN824226, btcn50353.129, btcn5112.156 Bt.4869.1.S1_at, Bt.24947.1.S1_at, Bt.28031.1.S1_s_at Bt.4869.1.S1_at (34 bases away) Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at
12104:30277_CL1Contig3-B:rXM_865978PREDICTED: Bos taurus hypothetical protein LOC614757, transcript variant 1 (LOC614757), mRNA4e-33
12105:8771_CL1Contig2-B:fXM_592386PREDICTED: Bos taurus similar to Y45F10A.6b (LOC514521), mRNA4e-33
12106:12533_CL4Contig1-A:fNM_198868 (12055 bases away)Homo sapiens TBC1 domain family, member 9B (with GRAM domain) (TBC1D9B), transcript variant 1, mRNAbtcn50353.129, btcn5112.156, btcn54612 Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.2505.1.S1_at, Bt.4869.1.S1_at, Bt.2505.2.S1_at, Bt.22716.1.A1_at, Bt.6928.1.S1_at, Bt.19426.1.A1_at, Bt.24947.2.S1_at, Bt.3535.1.S1_at, Bt.1690.1.S1_at, Bt.24947.1.S1_at, Bt.12859.1.S1_at, Bt.28031.1.S1_s_at, Bt.9192.1.A1_at, Bt.17634.1.A1_at Bt.1690.1.S1_at (33697 bases away)
12107:45506_60971958-B:fNM_002501Homo sapiens nuclear factor I/X (CCAAT-binding transcription factor) (NFIX), mRNAXM_867293PREDICTED: Bos taurus similar to nuclear factor I/X (CCAAT-binding transcription factor), transcript variant 2 (LOC536348), mRNA4e-33btcn8944 Bt.21089.2.S1_at (10910 bases away)
12108:11210_18108939-A:fNM_005583Homo sapiens lymphoblastic leukemia derived sequence 1 (LYL1), mRNAXM_867268PREDICTED: Bos taurus similar to lymphoblastic leukemia derived sequence 1 (LOC615458), mRNA4e-33BM365570 Bt.21089.2.S1_at (5836 bases away)
12109:10293_CL1Contig2-B:fNM_017722Homo sapiens TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) (TRMT1), mRNAXM_588358PREDICTED: Bos taurus similar to Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) (LOC539613), mRNA2e-26btcn8949 Bt.21089.2.S1_at, Bt.21089.3.S1_at
1210:4064_58764993-A:rNM_144575Homo sapiens calpain 13 (CAPN13), mRNAbtcn1335, CX951466 Bt.28357.1.A1_at, Bt.29297.1.S1_at Bt.29297.1.S1_at
12110:5728_CL1Contig1-A:rNM_052876Homo sapiens BTB (POZ) domain containing 14B (BTBD14B), mRNAXM_603731PREDICTED: Bos taurus similar to transcriptional repressor NAC1 (LOC525378), mRNA4e-27btcn8954 Bt.26200.1.A1_at (87 bases away)
12111:45360_CL225Contig2-B:rNM_003765Homo sapiens syntaxin 10 (STX10), mRNAXM_880046PREDICTED: Bos taurus similar to Syntaxin-10 (Syn10), transcript variant 3 (LOC525379), mRNA4e-33DV917559, btcn8953, btcn8952 Bt.28252.1.S1_at, Bt.28252.2.S1_a_at Bt.28252.1.S1_at, Bt.28252.2.S1_a_at Bt.28252.1.S1_at, Bt.28252.2.S1_a_at
12112:29460_CL1Contig1-A:rNM_004907Homo sapiens immediate early response 2 (IER2), mRNAXM_603733PREDICTED: Bos taurus similar to immediate early response 2 (LOC525380), mRNA2e-32btcn8946 Bt.22194.2.S1_at, Bt.22194.1.S1_at
12113:25995_CL16Contig1-B:fNM_023035 (568 bases away)Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A subunit (CACNA1A), transcript variant 2, mRNAbtcn8955 Bt.13071.2.S1_at (25876 bases away)
12114:6939_CL1Contig1-B:fNM_001035338Bos taurus CDC37 homolog (CDC37), mRNA4e-33
12115:25073_CL5Contig1-B:rNM_003331 (2260 bases away)Homo sapiens tyrosine kinase 2 (TYK2), mRNAXM_880115PREDICTED: Bos taurus similar to tyrosine kinase 2, transcript variant 2 (LOC512484), mRNA4e-33CB437766, btcn18238 Bt.4293.1.S1_at (15367 bases away) Bt.4293.1.S1_at (15363 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12116:19915_CL1Contig3-B:rNM_133452 (609 bases away)Homo sapiens ribonucleoprotein, PTB-binding 1 (RAVER1), mRNANM_174349Bos taurus intercellular adhesion molecule 3 (ICAM3), mRNA4e-33DR115540, btcn18223, CR383545, btcn18222 Bt.4293.1.S1_at Bt.4293.1.S1_at Bt.4293.1.S1_at Bt.4293.1.S1_at
12117:245_CL2Contig2-B:fNM_004945, NM_001005360, NM_001005362, NM_001005361Homo sapiens dynamin 2 (DNM2), transcript variant 3, mRNAXM_880660PREDICTED: Bos taurus similar to dynamin 2 isoform 2, transcript variant 12 (LOC511691), mRNA4e-33btcn30893, DY043303, btcn30896 Bt.8826.1.S1_at, Bt.21621.1.S1_at Bt.8826.1.S1_at (312 bases away) Bt.8826.1.S1_at, Bt.18482.1.A1_at
12118:17803_CL1Contig1-A:fNM_138358Homo sapiens chromosome 19 open reading frame 52 (C19orf52), mRNAXM_584795PREDICTED: Bos taurus hypothetical LOC508067 (LOC508067), mRNA1e-30btcn30905 Bt.5813.2.S1_at (5078 bases away)
1211:26065_CL1Contig1-B:fNM_017910, NM_182756Homo sapiens hypothetical protein FLJ20628 (FLJ20628), mRNAXM_615951PREDICTED: Bos taurus hypothetical LOC535837 (LOC535837), mRNA4e-33btcn10453 Bt.14351.1.A1_at, Bt.27671.1.A1_at
12120:36050_10239995-A:r
12123:7175_CL5Contig1-B:fNM_003072Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4), mRNAXM_881571PREDICTED: Bos taurus SWI/SNF related transcriptional activator, transcript variant 20 (BRG1), mRNA4e-33btcn30889 Bt.5596.2.S1_at, Bt.27590.2.S1_at, Bt.27590.1.A1_at
12125:14270_CL2Contig1-B:rNM_005224Homo sapiens AT rich interactive domain 3A (BRIGHT- like) (ARID3A), mRNAXM_588589PREDICTED: Bos taurus similar to AT-rich interactive domain-containing protein 3A (ARID domain-containing protein 3A) (B-cell regulator of IgH transcription) (Bright) (E2F binding protein 1) (LOC511283), mRNA4e-33btcn12731 Bt.27288.1.S1_at (1889 bases away)
12126:45360_7526158-A:fXM_589159PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A, member 7 isoform a, transcript variant 1 (LOC511762), mRNA1e-30
12127:45360_42728959-B:rXM_881668PREDICTED: Bos taurus similar to ATP-binding cassette, sub-family A, member 7 isoform a, transcript variant 4 (LOC511762), mRNA1e-14
12128:16312_11441767-A:fNM_138569Homo sapiens chromosome 6 open reading frame 142 (C6orf142), mRNAXM_595931PREDICTED: Bos taurus similar to plasticity-related protein PRG-2 (LOC517754), mRNA4e-33DV930393, DV793618, btcn41099, btcn53408 Bt.29080.2.S1_at (120280 bases away) Bt.29080.2.S1_at (155598 bases away) Bt.29080.2.S1_at (62570 bases away) Bt.29080.2.S1_at (62570 bases away)
12129:3583_6761376-A:fNM_024888, NM_138569Homo sapiens plasticity-related gene 2 (PRG2), mRNAXM_595931PREDICTED: Bos taurus similar to plasticity-related protein PRG-2 (LOC517754), mRNA5e-14AW325455, btcn41099, btcn53408 Bt.29080.2.S1_at (98602 bases away) Bt.29080.2.S1_at (62570 bases away) Bt.29080.2.S1_at (62570 bases away)
1212:40657_CL2Contig1-B:fXM_932951, XM_944891, XM_932958, XM_944887, XM_944893, XM_087089PREDICTED: Homo sapiens WD repeat domain 43, transcript variant 1 (WDR43), mRNAXM_583609PREDICTED: Bos taurus similar to WD-repeat protein 43 (LOC538915), mRNA4e-33btcn10447, DN516100, btcn10445 Bt.24856.1.A1_at, Bt.24856.2.S1_at Bt.24856.1.A1_at Bt.6782.1.A1_at, Bt.24856.1.A1_at, Bt.24856.2.S1_at
12130:261_CL1Contig3-B:fNM_174442Bos taurus polypyrimidine tract binding protein 1 (PTBP1), mRNA4e-33
12131:17074_CL1Contig1-B:rNM_002579 (8053 bases away)Homo sapiens paralemmin (PALM), transcript variant 1, mRNANM_001035269Bos taurus similar to paralemmin (MGC127138), mRNA4e-33CK834461, btcn53415 Bt.28283.1.S1_at (1177 bases away) Bt.28283.1.S1_at
12132:14579_CL1Contig1-B:fNM_002579, NM_001040134Homo sapiens paralemmin (PALM), transcript variant 1, mRNAbtcn53416, BM288047 Bt.4936.1.S1_at Bt.4936.1.S1_at (142 bases away)
12133:4801_CL1Contig1-A:rNM_130762 (2321 bases away)Homo sapiens mucosal vascular addressin cell adhesion molecule 1 (MADCAM1), transcript variant 2, mRNANM_001037821Bos taurus mucosal addressin cellular adhesion molecule-1 (LOC527275), mRNA4e-33btcn20494 Bt.29258.1.A1_a_at, Bt.29258.2.A1_at, Bt.29258.1.A1_at
12134:10831_CL1Contig1-B:fNM_130762 (5941 bases away)Homo sapiens mucosal vascular addressin cell adhesion molecule 1 (MADCAM1), transcript variant 2, mRNAXM_582010PREDICTED: Bos taurus similar to gene trap ROSA b-geo 22 (LOC505683), mRNA4e-33CK775663.1, btcn20491.1 Bt.29258.1.A1_a_at (1640 bases away) Bt.29258.1.A1_a_at (1621 bases away)
12135:3101_CL5Contig1-B:rNM_004359 (160 bases away)Homo sapiens cell division cycle 34 (CDC34), mRNAXM_868121PREDICTED: Bos taurus similar to cell division cycle 34 homolog (LOC616156), mRNA2e-32btcn20492, btcn20493 Bt.1667.1.S1_at Bt.1667.1.S1_at
12136:45360_CL536Contig1-B:fNM_004359 (7454 bases away)Homo sapiens cell division cycle 34 (CDC34), mRNAXM_589755PREDICTED: Bos taurus similar to Granzyme M precursor (Met-ase) (Natural killer cell granular protease) (HU-Met-1) (Met-1 serine protease) (LOC512272), mRNA1e-30btcn20495 Bt.1667.1.S1_at (2800 bases away)
12137:4511_CL1Contig1-B:fNM_198591 (388 bases away)Homo sapiens basigin (Ok blood group) (BSG), transcript variant 4, mRNAXM_585535PREDICTED: Bos taurus similar to basigin isoform 2, transcript variant 1 (LOC508716), mRNA4e-33btcn20490, btcn20489, DV791616, DV792705 Bt.3791.1.S1_at Bt.3791.1.S1_at Bt.3791.1.S1_at Bt.3791.1.S1_at (375 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12138:15493_CL3Contig1-B:rNM_058164Homo sapiens olfactomedin 2 (OLFM2), mRNAXM_583828PREDICTED: Bos taurus similar to olfactomedin 2 (predicted) (LOC507252), partial mRNA4e-33btcn48793 Bt.5583.1.S1_at (4693 bases away)
12139:2625_CL1Contig1-B:rNM_000208, NM_006202Homo sapiens insulin receptor (INSR), mRNAXM_868607PREDICTED: Bos taurus similar to cAMP-specific 3,5-cyclic phosphodiesterase 4A (DPDE2) (PDE46), transcript variant 2 (LOC512222), mRNA2e-25btcn23594 Bt.5608.1.A1_at
1213:4847_CL1Contig1-A:rNM_024692Homo sapiens restin-like 2 (RSNL2), mRNAXM_878842PREDICTED: Bos taurus similar to restin-like 2, transcript variant 4 (LOC515213), mRNA2e-29btcn10450, btcn10449 Bt.13892.1.S1_at (158 bases away) Bt.13892.1.S1_at (3786 bases away)
12140:5715_CL2Contig2-B:fNM_203500, NM_000208, NM_012289Homo sapiens insulin receptor (INSR), mRNAXM_881883PREDICTED: Bos taurus similar to kelch-like ECH-associated protein 1, transcript variant 5 (LOC532791), mRNA4e-33btcn23582, DV797194 Bt.3767.2.S1_at, Bt.3767.3.S1_a_at, Bt.3767.1.A1_at Bt.3767.2.S1_at
12141:10789_CL1Contig1-B:rNM_032885, NM_178159, NM_000208, NM_023008Homo sapiens insulin receptor (INSR), mRNAXM_868711PREDICTED: Bos taurus similar to APG4 autophagy 4 homolog D, transcript variant 1 (LOC615657), mRNA4e-33btcn23588 Bt.13421.1.S1_at, Bt.13421.2.S1_at, Bt.13421.3.S1_at
12142:5163_CL1Contig1-B:rNM_001800, NM_000208, NM_079421Homo sapiens insulin receptor (INSR), mRNAXM_881930PREDICTED: Bos taurus similar to Cyclin-dependent kinase 4 inhibitor D (p19-INK4d), transcript variant 2 (LOC510244), mRNA1e-30btcn23595, btcn23596, CO881585 Bt.29281.2.A1_a_at (2278 bases away) Bt.29281.2.A1_a_at (1804 bases away) Bt.29281.2.A1_a_at (1676 bases away)
12143:7681_CL3Contig2-B:rNM_000208, NM_005498Homo sapiens insulin receptor (INSR), mRNANM_001034511Bos taurus similar to Adaptor-related protein complex 1, mu 2 subunit (Mu-adaptin 2) (Adaptor protein complex AP-1 mu-2 subunit) (Golgi adaptor HA1/AP1 adaptin mu-2 subunit) (Clathrin assembly protein assembly protein complex 1 medium chain 2) (AP-mu chain fa... (MGC127475), mRNA1e-27BE809537, btcn23587, btcn23584 Bt.29281.2.A1_a_at Bt.29281.1.S1_at, Bt.29281.2.A1_a_at Bt.29281.1.S1_at, Bt.29281.2.A1_a_at
12144:25157_CL1Contig2-A:fNM_003755Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa (EIF3S4), mRNAbtcn55283, btcn18234, BM363264, btcn55285, DY171405 Bt.7929.1.S1_at Bt.7929.1.S1_at Bt.7929.1.S1_at Bt.7929.1.S1_at Bt.7929.1.S1_at
12146:3144_6945011-A:fNM_001031799, NM_175062Homo sapiens RasGEF domain family, member 1C (RASGEF1C), transcript variant 1, mRNAXM_601402PREDICTED: Bos taurus similar to RasGEF domain family, member 1C isoform 1 (LOC523107), partial mRNA4e-33AW417129 Bt.7533.1.S1_at (113497 bases away)
12148:45360_CL268Contig1-B:fNM_000527Homo sapiens low density lipoprotein receptor (familial hypercholesterolemia) (LDLR), mRNAXM_882167PREDICTED: Bos taurus low density lipoprotein receptor, transcript variant 5 (ldlr), mRNA4e-33btcn40729 Bt.3562.1.S1_at
12149:17134_CL1Contig1-B:fNM_182513Homo sapiens spindle pole body component 24 homolog (S. cerevisiae) (SPBC24), mRNAXM_586011PREDICTED: Bos taurus similar to spindle pole body component 24 homolog (LOC509117), mRNA4e-33btcn40731 Bt.9517.1.S1_a_at
1214:18652_CL2Contig1-B:fNM_139267, NM_020151Homo sapiens START domain containing 7 (STARD7), transcript variant 1, mRNAXM_603307PREDICTED: Bos taurus similar to START domain containing 7 (LOC524966), mRNA4e-33btcn15323 Bt.15949.1.S1_at
12150:22075_CL1Contig1-A:fNM_018687, NM_020812Homo sapiens hepatocellular carcinoma-associated gene TD26 (LOC55908), mRNAXM_868343PREDICTED: Bos taurus similar to hepatocellular carcinoma-associated gene TD26 (LOC616345), mRNA4e-33btcn40738 Bt.17610.1.A1_at
12151:1529_CL6Contig1-B:r
12152:4941_CL1Contig1-C:fXM_934607, XM_943894, XM_934591, XM_934597, XM_943893, XM_496289, XM_943899, XM_934608, XM_934602, XM_938865, XM_943923, XM_943911, XM_943920, XM_934593, XM_943914, XM_943908, XM_934604, XM_934606PREDICTED: Homo sapiens hypothetical protein LOC126075, transcript variant 1 (LOC126075), mRNAXM_868426PREDICTED: Bos taurus hypothetical protein LOC616411 (LOC616411), mRNA1e-30btcn40770 Bt.17307.1.A1_at
12153:4045_CL3Contig1-B:fNM_022737Homo sapiens lipid phosphate phosphatase-related protein type 2 (LPPR2), mRNAXM_882303PREDICTED: Bos taurus similar to lipid phosphate phosphatase-related protein type 2, transcript variant 4 (LOC520247), mRNA4e-33btcn40757, btcn40756 Bt.17307.1.A1_at (587 bases away) Bt.10704.1.S1_at
12154:27464_CL1Contig1-A:rNM_175871Homo sapiens chromosome 19 open reading frame 39 (C19orf39), mRNAXM_583710PREDICTED: Bos taurus hypothetical LOC507152 (LOC507152), mRNA4e-33btcn40764 Bt.13150.1.A1_at (3889 bases away)
12155:2148_CL7Contig1-B:fNM_000121Homo sapiens erythropoietin receptor (EPOR), mRNAXM_583711PREDICTED: Bos taurus erythropoietin receptor (EPOR), mRNA4e-33btcn40768 Bt.13150.1.S1_at, Bt.13150.1.A1_at
12156:19305_15960555-A:fXM_943934 (548 bases away)PREDICTED: Homo sapiens ral guanine nucleotide dissociation stimulator-like 3, transcript variant 13 (RGL3), mRNAXM_596176PREDICTED: Bos taurus similar to CG14127-PA (LOC517994), mRNA3e-31BI848036 Bt.13150.1.A1_at (20884 bases away)
12158:2980_CL1Contig3-A:rNM_176662Bos taurus protein kinase C substrate 80K-H (PRKCSH), mRNA4e-33

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12159:32199_CL22Contig1-A:fNM_001420, NM_032281Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) (ELAVL3), transcript variant 1, mRNAXM_869171PREDICTED: Bos taurus similar to ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21), transcript variant 2 (LOC520376), mRNA1e-30btcn40733 Bt.27445.1.A1_at, Bt.27456.1.A1_at, Bt.27445.2.S1_at
1215:3751_CL6Contig1-B:fNM_206876, NM_002709Homo sapiens protein phosphatase 1, catalytic subunit, beta isoform (PPP1CB), transcript variant 1, mRNANM_001034653Bos taurus similar to Serine/threonine protein phosphatase PP1-beta catalytic subunit (PP-1B) (MGC129042), mRNA4e-33CX736077, btcn31792, DV798182 Bt.9954.1.S1_at, Bt.20931.1.S1_at Bt.9954.1.S1_at, Bt.20931.1.S1_at, Bt.13199.1.S1_at Bt.20931.1.S1_at
12162:6984_CL1Contig1-B:fNM_016581Homo sapiens ECSIT homolog (Drosophila) (ECSIT), mRNANM_001034286Bos taurus similar to evolutionarily conserved signaling intermediate in Toll pathway (MGC128961), mRNA4e-33btcn40744, btcn40745 Bt.2894.1.S1_at (779 bases away) Bt.2894.1.S1_at
12163:3506_CL2Contig2-B:rXM_882480PREDICTED: Bos taurus similar to calponin 1, basic, smooth muscle, transcript variant 3 (LOC534583), mRNA4e-33
12164:11165_CL1Contig1-A:fNM_032377Homo sapiens elongation factor 1 homolog (S. cerevisiae) (ELOF1), mRNAXM_882503PREDICTED: Bos taurus similar to elongation factor 1 homolog (ELF1, S. cerevisiae), transcript variant 2 (LOC615856), mRNA4e-33CB439930, btcn40735 Bt.3869.1.S1_at Bt.3869.1.S1_at
12165:987_CL1Contig2-B:fNM_001611Homo sapiens acid phosphatase 5, tartrate resistant (ACP5), mRNAXM_882531PREDICTED: Bos taurus similar to tartrate resistant acid phosphatase 5 precursor, transcript variant 3 (LOC517002), mRNA4e-33btcn40737, CK833627, btcn40736, CK956298 Bt.5193.1.S1_at, Bt.5193.2.S1_a_at Bt.5193.1.S1_at (1191 bases away) Bt.5193.1.S1_at (1269 bases away) Bt.5193.1.S1_at (955 bases away)
12167:45360_11701151-A:fXM_580324PREDICTED: Bos taurus similar to Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 / hnRNP B1) (LOC538435), mRNA4e-33
12168:34974_60721678-A:fNM_000208Homo sapiens insulin receptor (INSR), mRNAXM_590552PREDICTED: Bos taurus insulin receptor (LOC408017), partial mRNA4e-33btcn9719 Bt.28266.2.S1_at (1865 bases away)
12169:6084_9722816-A:fNM_144693 (26368 bases away)Homo sapiens zinc finger protein 558 (ZNF558), mRNAXM_585671PREDICTED: Bos taurus similar to RNA-binding protein S1, serine-rich domain (LOC508834), mRNA4e-33btcn9724 Bt.28266.1.A1_at (20181 bases away)
1216:37054_CL2Contig1-A:fNM_001008779, NM_182756Homo sapiens speedy homolog A (Drosophila) (SPDYA), transcript variant 2, mRNAXM_868422PREDICTED: Bos taurus similar to speedy homolog 1 isoform 1 (LOC616408), partial mRNA2e-32btcn31791 Bt.9954.1.S1_at, Bt.20931.1.S1_at, Bt.13199.1.S1_at
12170:25701_CL1Contig2-A:fNM_032447 (3260 bases away)Homo sapiens fibrillin 3 (FBN3), mRNAXM_882549PREDICTED: Bos taurus similar to small inducible cytokine A25 isoform 1 precursor, transcript variant 2 (LOC615986), mRNA4e-33btcn29488, btcn29489, DT822245, BM289370, btcn29492 Bt.9577.1.S1_a_at Bt.9577.1.S1_a_at Bt.9577.1.S1_a_at Bt.9577.1.S1_a_at Bt.9577.1.S1_a_at (252 bases away)
12171:45360_CL434Contig1-A:rNM_032447Homo sapiens fibrillin 3 (FBN3), mRNAbtcn29517 Bt.3731.1.S1_at
12173:45360_15959958-A:f
12174:4566_CL2Contig1-B:fNM_001015520Bos taurus LAG1 longevity assurance homolog 4 (LASS4), mRNA4e-33
12176:2006_CL1Contig2-B:fNM_005001Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa (NDUFA7), mRNANM_176658Bos taurus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa (NDUFA7), mRNA4e-33btcn29496, DV811614, btcn29498, btcn29499 Bt.20.1.S1_at Bt.20.1.S1_at Bt.20.1.S1_at, Bt.22772.1.S1_at, Bt.25858.1.A1_at Bt.20.1.S1_at
12177:1262_CL1Contig1-A:rXM_941610 (183 bases away)PREDICTED: Homo sapiens similar to 40S ribosomal protein S28 (LOC649295), mRNANM_001025316Bos taurus ribosomal protein S28 (RPS28), mRNA9e-22btcn29497.2, DN275832.2, DV791710.1, btcn29495, DN278693.2, btcn15056.1, CV981793.1, AV594420, btcn29498, DV850536.1, btcn29497, BE750826 Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.20.1.S1_at, Bt.22772.1.S1_at, Bt.25858.1.A1_at Bt.22772.1.S1_at Bt.22772.1.S1_at Bt.22772.1.S1_at
12178:15855_CL2Contig2-B:rXM_941610 (632 bases away)PREDICTED: Homo sapiens similar to 40S ribosomal protein S28 (LOC649295), mRNAXM_587034PREDICTED: Bos taurus similar to ankyrin repeat domain 47 (LOC509964), mRNA4e-33btcn29519, btcn29518 Bt.1776.3.A1_at, Bt.1776.2.S1_a_at Bt.1776.2.S1_a_at
12179:9580_CL1Contig1-B:fNM_001039667, NM_139314Homo sapiens angiopoietin-like 4 (ANGPTL4), transcript variant 1, mRNAXM_587033PREDICTED: Bos taurus similar to Angiopoietin-related protein 4 precursor (Angiopoietin-like 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP) (Fasting-induced adipose factor) (Secreted protein Bk89) (425O18-1) (LOC509963), mRNA4e-33BF706524, btcn29508 Bt.4816.1.S1_at (1585 bases away) Bt.4816.1.S1_at
12180:3795_CL3Contig1-B:fNM_004218Homo sapiens RAB11B, member RAS oncogene family (RAB11B), mRNANM_001035391Bos taurus RAB11A, member RAS oncogene family (RAB11A), mRNA4e-33btcn29500 Bt.4347.1.S1_at
12181:3259_CL1Contig1-B:fNM_001005416, NM_001005415, NM_016496Homo sapiens membrane-associated ring finger (C3HC4) 2 (MARCH2), transcript variant 1, mRNANM_001037589Bos taurus membrane-associated ring finger (C3HC4) 2 (MARCH2), mRNA4e-33btcn29505 Bt.28938.1.A1_at, Bt.12739.2.S1_a_at, Bt.12739.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12182:8532_CL1Contig1-B:rNM_005968, NM_031203Homo sapiens heterogeneous nuclear ribonucleoprotein M (HNRPM), transcript variant 1, mRNAXM_585806PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein M isoform a (LOC508950), mRNA4e-33btcn29510, btcn29511, btcn29509 Bt.18236.1.A1_at Bt.18236.1.A1_at Bt.12739.1.S1_at (5434 bases away)
12183:25469_11700830-A:fNM_015318Homo sapiens rho/rac guanine nucleotide exchange factor (GEF) 18 (ARHGEF18), mRNAXM_600806PREDICTED: Bos taurus similar to Rho-specific guanine nucleotide exchange factor p114 (LOC522521), mRNA4e-33BF603329 Bt.1054.1.S1_at (18855 bases away)
12185:45360_CL1431Contig1-A:fNM_018083Homo sapiens zinc finger protein 358 (ZNF358), mRNAXM_582193PREDICTED: Bos taurus similar to Zinc finger protein 358, transcript variant 1 (LOC505837), mRNA4e-33btcn1736, btcn18929.1 Bt.21965.1.S1_at Bt.21965.1.S1_at
12186:44331_CL1Contig1-B:fNM_020533Homo sapiens mucolipin 1 (MCOLN1), mRNAXM_582073PREDICTED: Bos taurus similar to mucolipin 1 (LOC505738), mRNA4e-33btcn1716, btcn1714, DN533766, btcn1715 Bt.5087.1.S1_at, Bt.26509.1.S1_at Bt.26509.1.S1_at Bt.26509.1.S1_at Bt.26509.1.S1_at
12187:16118_CL1Contig3-B:rNM_006702Homo sapiens patatin-like phospholipase domain containing 6 (PNPLA6), mRNAbtcn1716, btcn1713, CR850818 Bt.5087.1.S1_at, Bt.26509.1.S1_at Bt.5087.1.S1_at Bt.5087.1.S1_at
12188:230_CL3Contig1-A:fXM_940427, XM_048362PREDICTED: Homo sapiens KIAA1543 (KIAA1543), mRNAbtcn1742 Bt.16903.1.A1_at (4620 bases away)
12189:45370_CL1Contig2-B:fNM_174895 (960 bases away)Homo sapiens Purkinje cell protein 2 (PCP2), mRNAXM_882709PREDICTED: Bos taurus similar to CG14483-PA, transcript variant 2 (LOC616224), mRNA4e-33btcn1741 Bt.9415.1.S1_at (8000 bases away)
1218:2060_CL2Contig1-A:fNM_005544Homo sapiens insulin receptor substrate 1 (IRS1), mRNAXM_581382PREDICTED: Bos taurus similar to insulin receptor substrate 1, transcript variant 1 (LOC538598), mRNA4e-33btcn15639 Bt.27550.1.A1_at, Bt.6613.1.S1_at
12190:43590_51818117-A:fXM_940456PREDICTED: Homo sapiens hypothetical protein FLJ22184 (FLJ22184), mRNAXM_584509PREDICTED: Bos taurus hypothetical LOC507825 (LOC507825), mRNA4e-33btcn1745 Bt.11951.1.A1_at (15437 bases away)
12191:44922_24332321-A:fNM_025061Homo sapiens leucine rich repeat containing 8 family, member E (LRRC8E), mRNAXM_584508PREDICTED: Bos taurus similar to leucine rich repeat containing 8 family, member E (LOC507824), mRNA4e-33btcn1725 Bt.11951.1.A1_at (2580 bases away)
12192:10762_CL3Contig1-B:rNM_005490Homo sapiens SH2 domain containing 3A (SH2D3A), mRNAXM_882760PREDICTED: Bos taurus similar to SH2 domain containing 3A, transcript variant 2 (LOC510173), mRNA4e-33btcn6432 Bt.28316.1.S1_at
12193:5153_CL1Contig1-B:rNM_004240Homo sapiens thyroid hormone receptor interactor 10 (TRIP10), mRNAXM_869640PREDICTED: Bos taurus similar to thyroid hormone receptor interactor 10, transcript variant 3 (LOC533171), mRNA4e-33btcn6429, btcn6430 Bt.1323.1.S1_at Bt.1323.1.S1_at
12194:16096_9601710-B:fXM_933933, XM_945414, XM_941725, XM_945408, XM_933913, XM_933916, XM_945416, XM_290854, XM_945412, XM_933929, XM_933932, XM_945405PREDICTED: Homo sapiens G protein-coupled receptor 108, transcript variant 1 (GPR108), mRNAXM_584514PREDICTED: Bos taurus similar to G protein-coupled receptor 108 (LOC507830), mRNA4e-33btcn6431, BE482177 Bt.21315.3.S1_a_at, Bt.21315.2.S1_at Bt.21315.3.S1_a_at
12195:45360_CL15Contig2-B:rNM_000064, XM_936226Homo sapiens complement component 3 (C3), mRNANM_001040469Bos taurus complement component 3 (C3), mRNA4e-33btcn6425, CB534327, DV785800, DV786810, DV789620, DY074616, DV785109, DV787485, DV790897, CX735787, DV783829, CB531680, DV789810, DY166307, CB457311, btcn6423, CB530267, DV785193, DV787881, DV788755, DV788592, DV784057, DV785497, DY060631 Bt.19562.1.A1_at, Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.19562.1.A1_at, Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.19562.1.A1_at, Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.19562.1.A1_at, Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.19562.1.A1_at, Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.19562.1.A1_at, Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at Bt.4209.1.S1_a_at, Bt.4209.2.S1_at
12196:32199_CL11Contig2-A:fNM_001419Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) (ELAVL1), mRNAbtcn30756 Bt.14164.1.S1_at, Bt.10061.1.A1_at
12197:11213_CL1Contig1-B:rNM_206833 (1371 bases away)Homo sapiens cortexin 1 (CTXN1), mRNAXM_606577PREDICTED: Bos taurus similar to Import inner membrane translocase subunit TIM44, mitochondrial precursor (LOC528165), mRNA4e-33btcn30764, btcn30765 Bt.15870.1.S1_at Bt.15870.1.S1_at
12198:1520_CL1Contig1-B:rNM_003083Homo sapiens small nuclear RNA activating complex, polypeptide 2, 45kDa (SNAPC2), mRNANM_001034516Bos taurus similar to small nuclear RNA activating complex, polypeptide 2, 45kDa (MGC127459), mRNA4e-33btcn30755 Bt.22422.1.S1_at
12199:5592_CL2Contig1-B:fNM_000635, NM_134433Homo sapiens regulatory factor X, 2 (influences HLA class II expression) (RFX2), transcript variant 1, mRNAXM_614252PREDICTED: Bos taurus similar to regulatory factor X2 isoform b (LOC534475), mRNA4e-33btcn21272, btcn21275, btcn21273, BE666364, btcn21269, BI898866, btcn21274 Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.9918.1.S1_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.9918.1.S1_at (1016 bases away) Bt.21399.3.S1_a_at, Bt.9918.1.S1_at
1219:4948_CL2Contig1-B:rNM_032276Homo sapiens rhomboid domain containing 1 (RHBDD1), mRNAXM_613579PREDICTED: Bos taurus hypothetical LOC533985 (LOC533985), mRNA4e-33btcn15659 Bt.29725.1.A1_at (17373 bases away)
121:22621_CL1Contig1-A:rNM_199356, NM_199228, NM_000460Homo sapiens thrombopoietin (myeloproliferative leukemia virus oncogene ligand, megakaryocyte growth and development factor) (THPO), transcript variant 1, mRNAXM_581912PREDICTED: Bos taurus similar to thrombopoietin isoform 3 precursor, transcript variant 1 (LOC538672), mRNA4e-33btcn50061 Bt.24336.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12201:2877_10071496-A:fNM_003624 (4592 bases away)Homo sapiens RAN binding protein 3 (RANBP3), transcript variant RANBP3-a, mRNAbtcn21272, btcn21275, btcn21279, BE666364, btcn21269, btcn21274, BE684031 Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at, Bt.9918.1.S1_at Bt.21399.3.S1_a_at (969 bases away)
12204:39445_CL2Contig1-B:rNM_003624, NM_007320, NM_007322Homo sapiens RAN binding protein 3 (RANBP3), transcript variant RANBP3-a, mRNAXM_585447PREDICTED: Bos taurus similar to Ran-binding protein 3 (RanBP3), transcript variant 1 (LOC508641), mRNA4e-33btcn21270 Bt.18622.1.A1_at, Bt.7458.1.S1_at
12205:24630_CL2Contig1-B:rNM_004058, NM_080590Homo sapiens calcyphosine (CAPS), transcript variant 1, mRNAXM_869680PREDICTED: Bos taurus similar to calcyphosine isoform b, transcript variant 1 (LOC616482), mRNA4e-33btcn21267, btcn21270 Bt.7458.1.S1_at (13 bases away) Bt.18622.1.A1_at, Bt.7458.1.S1_at
12206:23172_45072140-A:fNM_001017921Homo sapiens vimentin-type IF-associated coiled-coil protein (VMAC), mRNAXM_593195PREDICTED: Bos taurus similar to vimentin-type IF-associated coiled-coil protein (LOC515212), mRNA4e-33btcn21288 Bt.5723.1.S1_at (1676 bases away)
12207:2710_28313179-B:fNM_175614 (3342 bases away)Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa (NDUFA11), mRNANM_175718Bos taurus mitochondrial NADH:ubiquinone oxidoreductase B14.7 (b14.7), mRNA6e-26btcn21256, BI977046, BP110945, btcn21255 Bt.5723.1.S1_at Bt.5723.1.S1_at Bt.25929.1.A1_at, Bt.5723.1.S1_at Bt.25929.1.A1_at, Bt.5723.1.S1_at
12208:1305_CL1Contig1-A:rNM_001040701, NM_000150, NM_002034, NM_000149Homo sapiens fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) (FUT3), mRNANM_176851Bos taurus alpha 1,3 fucosyltransferase (FUT), mRNA4e-33btcn21280 Bt.4074.1.S1_at
12209:22662_7047777-B:fNM_152784 (1501 bases away)Homo sapiens transmembrane protein 146 (TMEM146), mRNAXM_869741PREDICTED: Bos taurus hypothetical protein LOC617472 (LOC617472), mRNA3e-28btcn21294 Bt.11077.1.S1_at (5555 bases away)
1220:13377_CL1Contig2-B:rNM_177983, NM_002707Homo sapiens protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (PPM1G), transcript variant 2, mRNAbtcn12402, btcn15629, btcn15630 Bt.4938.1.S1_at Bt.4938.1.S1_at Bt.4938.1.S1_at
12211:11552_CL2Contig1-B:rNM_004793 (93 bases away)Homo sapiens protease, serine, 15 (PRSS15), nuclear gene encoding mitochondrial protein, mRNANM_001015569Bos taurus ATP-dependent Lon protease (PRSS15), mRNA4e-33btcn21251, BF775248, btcn21250 Bt.22312.1.S1_at Bt.22312.1.S1_at Bt.22312.1.S1_at, Bt.14228.1.S1_at
12212:45360_6728651-B:fNM_198708, NM_198533, NM_198706, NM_198707, NM_198704Homo sapiens hydroxysteroid (11-beta) dehydrogenase 1-like (HSD11B1L), transcript variant e, mRNANM_206969Bos taurus 11-beta-hydroxysteroid dehydrogenase type 3 (11-beta-HSD3), mRNA4e-33CK943516, btcn21286, CN436322, btcn21287, btcn21285 Bt.17793.1.A1_at (38 bases away) Bt.17793.1.A1_at Bt.17793.1.A1_at Bt.17793.1.A1_at Bt.17793.1.A1_at (138 bases away)
12213:21141_CL1Contig1-B:fNM_205767Homo sapiens hypothetical protein P117 (P117), mRNAXM_882913PREDICTED: Bos taurus hypothetical LOC540962, transcript variant 3 (LOC540962), mRNA4e-33btcn21282, btcn21281, DT844071, btcn21283 Bt.22518.1.S1_a_at Bt.22518.1.S1_a_at Bt.22518.1.S1_a_at Bt.22518.1.S1_a_at
12214:4606_CL1Contig1-B:rNM_002967Homo sapiens scaffold attachment factor B (SAFB), mRNAXM_882933PREDICTED: Bos taurus similar to scaffold attachment factor B, transcript variant 3 (LOC539785), mRNA4e-33btcn21260, btcn21259 Bt.20046.1.S1_a_at Bt.20046.1.S1_a_at, Bt.20046.2.A1_at
12217:3613_47682481-A:fNM_018317Homo sapiens TBC1 domain family, member 19 (TBC1D19), mRNAXM_869790PREDICTED: Bos taurus similar to TBC1 domain family member 19 (LOC617514), partial mRNA4e-33btcn7430 Bt.8650.1.A1_at (163348 bases away)
12218:6299_11696815-C:fNM_006087 (4761 bases away)Homo sapiens tubulin, beta 4 (TUBB4), mRNAXM_592548PREDICTED: Bos taurus similar to ER transmembrane protein Dri 42 (LOC514661), mRNA4e-33DT888802 Bt.23537.1.S1_a_at (6356 bases away)
12219:34670_CL1Contig1-B:rNM_001015527Bos taurus general transcription factor IIF, polypeptide 1, 74kDa (GTF2F1), mRNA4e-33
1221:5833_CL1Contig1-B:rNM_014748Homo sapiens sorting nexin 17 (SNX17), mRNANM_001015638Bos taurus sorting nexin 17 (SNX17), mRNA4e-33btcn15640, CO882995 Bt.7410.1.S1_at Bt.7410.1.S1_at (887 bases away)
12220:32015_CL1Contig3-B:rXM_882997PREDICTED: Bos taurus similar to spermatogenesis associated 11, transcript variant 3 (LOC535305), mRNA4e-33
12221:7300_CL1Contig1-B:rXM_616099PREDICTED: Bos taurus similar to Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (Endopeptidase Clp) (LOC535981), mRNA4e-33
12222:19294_37716998-A:fNM_133492Homo sapiens N-acylsphingosine amidohydrolase (alkaline ceramidase) 3 (ASAH3), mRNAXM_883012PREDICTED: Bos taurus similar to N-acylsphingosine amidohydrolase 3, transcript variant 2 (LOC518021), mRNA4e-33DV920173, CF767779 Bt.22047.1.S1_at (23200 bases away) Bt.22047.1.S1_at (23164 bases away)
12223:24358_CL4Contig1-B:fNM_005934Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (MLLT1), mRNAXM_580591PREDICTED: Bos taurus similar to myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (LOC504458), mRNA4e-33btcn7433 Bt.13347.1.S1_at (10681 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12224:6176_CL1Contig1-A:fNM_005934Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (MLLT1), mRNAbtcn7412 Bt.13347.1.S1_at
12225:12477_9607399-A:fNM_012335Homo sapiens myosin IF (MYO1F), mRNAXM_602415PREDICTED: Bos taurus similar to myosin IF (LOC524095), partial mRNA4e-33BE487866 Bt.27877.1.S1_at (30006 bases away)
12226:7481_CL2Contig1-B:rNM_030957Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 10 (ADAMTS10), mRNAXM_883027PREDICTED: Bos taurus similar to ADAM metallopeptidase with thrombospondin type 1 motif, 10 preproprotein, transcript variant 3 (LOC513140), mRNA4e-33btcn45939 Bt.27877.1.S1_at (44285 bases away)
12227:17077_CL1Contig1-B:rNM_005428Homo sapiens vav 1 oncogene (VAV1), mRNAXM_869977PREDICTED: Bos taurus similar to Vav proto-oncogene (LOC617673), partial mRNA4e-33btcn8746 Bt.21717.2.S1_at
12229:5743_CL1Contig1-B:fNM_015015Homo sapiens jumonji domain containing 2B (JMJD2B), mRNAXM_584880PREDICTED: Bos taurus similar to Jumonji domain containing protein 2B (LOC508141), mRNA4e-33btcn56363 Bt.22423.1.S1_at
1222:7513_CL1Contig1-B:fNM_172195, NM_015636, NM_001034116Homo sapiens eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa (EIF2B4), transcript variant 3, mRNANM_001034544Bos taurus similar to eukaryotic translation initiation factor 2B, subunit 4 delta short isoform (MGC127736), mRNA4e-33DT815768, btcn15647 Bt.16222.1.S1_at Bt.16222.1.S1_at
12230:1183_CL1Contig1-B:rNM_013282Homo sapiens ubiquitin-like, containing PHD and RING finger domains, 1 (UHRF1), mRNAXM_608882PREDICTED: Bos taurus similar to ubiquitin-like, containing PHD and RING finger domains, 1 (LOC530411), mRNA4e-33btcn56357 Bt.28379.1.S1_at, Bt.27328.1.S1_at, Bt.11098.1.S1_at
12231:19854_CL1Contig1-A:rXM_940152 (11001 bases away)PREDICTED: Homo sapiens similar to CG4674-PA (LOC651041), mRNAXM_870040PREDICTED: Bos taurus similar to CG4674-PA (LOC617727), mRNA4e-33btcn56365 Bt.11098.1.S1_at (5960 bases away)
12232:33181_CL1Contig2-B:rNM_005817Homo sapiens mannose-6-phosphate receptor binding protein 1 (M6PRBP1), mRNAbtcn56356, CB420755 Bt.21743.1.A1_at Bt.21743.1.A1_at
12233:15921_62525575-A:fNM_182919Homo sapiens toll-like receptor adaptor molecule 1 (TICAM1), transcript variant 2, mRNANM_001030301Bos taurus TIR domain containing adaptor inducing interferon-beta (TRIF), mRNA1e-30btcn56355 Bt.21743.1.A1_at (9581 bases away)
12235:46187_51813693-A:fNM_020209 (826 bases away)Homo sapiens Src homology 2 domain containing transforming protein D (SHD), mRNAXM_602676PREDICTED: Bos taurus hypothetical LOC524354 (LOC524354), mRNA4e-33btcn42298 Bt.7923.1.A1_at
12237:15774_CL1Contig1-B:rNM_024333Homo sapiens fibronectin type III and SPRY domain containing 1 (FSD1), mRNAXM_587756PREDICTED: Bos taurus similar to fibronectin type III and SPRY domain containing 1, transcript variant 1 (LOC510595), mRNA4e-33DV912530, btcn42285, btcn42286 Bt.24575.2.S1_a_at (6999 bases away) Bt.24575.2.S1_a_at Bt.24575.2.S1_a_at
12238:1471_CL2Contig1-B:rNM_001013841, NM_017720Homo sapiens signal-transducing adaptor protein-2 (STAP2), transcript variant 1, mRNANM_001034246Bos taurus similar to Signal-transducing adaptor protein 2 (STAP-2) (Breast tumor kinase substrate) (BRK substrate) (MGC127502), mRNA4e-33AW445849, btcn42262 Bt.11739.1.S1_a_at (2216 bases away) Bt.11739.1.S1_a_at
12239:6989_CL1Contig3-B:rNM_032868 (550 bases away)Homo sapiens hypothetical protein FLJ14981 (FLJ14981), mRNAXM_590284PREDICTED: Bos taurus similar to CG4751-PA (LOC512718), mRNA4e-33btcn42268, btcn42273, DV813830, btcn42274 Bt.19515.1.S1_at Bt.19515.1.S1_at (580 bases away) Bt.19515.1.S1_at (189 bases away) Bt.19515.1.S1_at
1223:8446_9602009-A:fNM_001035521, NM_001521Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 1, mRNABE482476 Bt.16222.1.S1_at (4583 bases away)
12240:183_CL1Contig1-B:rNM_003025, XM_942447Homo sapiens SH3-domain GRB2-like 1 (SH3GL1), mRNAXM_883101PREDICTED: Bos taurus similar to SH3-containing GRB2-like protein 1 (SH3 domain protein 2B) (Extra eleven-nineteen leukemia fusion gene) (EEN) (EEN fusion partner of MLL), transcript variant 7 (LOC512719), mRNA1e-30btcn42267, btcn42275, CN436872, AW446831 Bt.5017.1.S1_at (387 bases away) Bt.5017.1.S1_at Bt.5017.1.S1_at Bt.5017.1.S1_at (214 bases away)
12241:10350_CL1Contig1-B:rNM_025241Homo sapiens UBX domain containing 1 (UBXD1), mRNAXM_870019PREDICTED: Bos taurus similar to UBX domain containing 1, transcript variant 2 (LOC507936), mRNA4e-33btcn42281, DT814130, btcn42282, DY082162, DY127231 Bt.4626.1.S1_a_at Bt.4626.1.S1_a_at (801 bases away) Bt.4626.1.S1_a_at Bt.4626.1.S1_a_at Bt.4626.1.S1_a_at (1097 bases away)
12242:9124_CL4Contig1-B:rNM_005483Homo sapiens chromatin assembly factor 1, subunit A (p150) (CHAF1A), mRNAXM_580677PREDICTED: Bos taurus similar to chromatin assembly factor 1, subunit A (p150), transcript variant 1 (LOC504535), mRNA4e-33btcn42280, CB429857 Bt.27356.1.S1_at Bt.27356.1.S1_at
12243:9124_CL3Contig1-B:rNM_005483Homo sapiens chromatin assembly factor 1, subunit A (p150) (CHAF1A), mRNAXM_580677PREDICTED: Bos taurus similar to chromatin assembly factor 1, subunit A (p150), transcript variant 1 (LOC504535), mRNA4e-33btcn42277, CN436919 Bt.27356.1.S1_at (7717 bases away) Bt.27356.1.S1_at (7727 bases away)
12244:9124_CL2Contig1-B:fNM_005483Homo sapiens chromatin assembly factor 1, subunit A (p150) (CHAF1A), mRNAXM_580677PREDICTED: Bos taurus similar to chromatin assembly factor 1, subunit A (p150), transcript variant 1 (LOC504535), mRNA4e-33btcn42276 Bt.27356.1.S1_at (9556 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12245:9757_46416560-A:fNM_152362Homo sapiens tumor necrosis factor, alpha-induced protein 8-like 1 (TNFAIP8L1), mRNAXM_610353PREDICTED: Bos taurus similar to tumor necrosis factor, alpha-induced protein 8-like 1 (LOC531850), mRNA1e-30btcn42290 Bt.5080.1.A1_at (1149 bases away)
12246:21193_CL1Contig1-B:fNM_019107Homo sapiens chromosome 19 open reading frame 10 (C19orf10), mRNANM_001001164Bos taurus C19orf10-like (LOC407769), mRNA4e-33btcn42264 Bt.5080.1.A1_at
12247:18969_CL9Contig1-A:fNM_139159Homo sapiens dipeptidyl-peptidase 9 (DPP9), mRNAXM_599357PREDICTED: Bos taurus similar to Dipeptidyl peptidase 9 (Dipeptidyl peptidase IX) (DP9) (Dipeptidyl peptidase-like protein 9) (DPLP9) (Dipeptidyl peptidase IV-related protein 2) (DPRP-2) (LOC521100), mRNA4e-33btcn42288 Bt.5080.1.A1_at (15970 bases away)
12248:14912_CL1Contig1-A:rXM_594705PREDICTED: Bos taurus similar to fem-1 homolog a (C.elegans), transcript variant 1 (LOC516550), mRNA4e-33
12249:19526_CL1Contig1-B:rNM_016539Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) (SIRT6), mRNAXM_883144PREDICTED: Bos taurus similar to Mono-ADP-ribosyltransferase sirtuin-6 (SIR2-like protein 6), transcript variant 3 (LOC535416), mRNA4e-33btcn18041 Bt.20024.1.S1_at (320 bases away)
1224:8446_CL1Contig1-B:rNM_001035521, NM_001521Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 1, mRNAbtcn15655, btcn15653, btcn15654 Bt.20539.1.S1_at (299 bases away) Bt.20539.1.S1_at (590 bases away) Bt.20539.1.S1_at (1618 bases away)
12250:25444_CL2Contig1-B:rNM_032607 (2658 bases away)Homo sapiens cAMP responsive element binding protein 3-like 3 (CREB3L3), mRNANM_001034432Bos taurus cAMP responsive element binding protein 3-like 3 (CREB3L3), mRNA4e-33btcn18039 Bt.18871.1.S1_at
12251:12129_CL8Contig1-B:fNM_130855, NM_130854, NM_130853, NM_002850Homo sapiens protein tyrosine phosphatase, receptor type, S (PTPRS), transcript variant 1, mRNAXM_870206PREDICTED: Bos taurus similar to protein tyrosine phosphatase, receptor type, sigma isoform 1 precursor (LOC617876), mRNA2e-25btcn36511 Bt.9933.1.S1_at (33646 bases away)
12252:12129_CL6Contig1-B:rNM_130855, NM_130854, NM_130853, NM_002850Homo sapiens protein tyrosine phosphatase, receptor type, S (PTPRS), transcript variant 1, mRNAXM_617648PREDICTED: Bos taurus similar to protein tyrosine phosphatase, receptor type, sigma isoform 2 precursor (LOC537480), mRNA4e-33btcn36506 Bt.9933.1.S1_at (77 bases away)
12256:5211_6953054-A:fNM_033064Homo sapiens ataxia, cerebellar, Cayman type (caytaxin) (ATCAY), mRNAXM_586425PREDICTED: Bos taurus similar to caytaxin (LOC509463), mRNA4e-33btcn12865 Bt.7034.1.S1_at (12951 bases away)
12257:6496_11441839-A:fNM_170678, NM_014446Homo sapiens integrin beta 1 binding protein 3 (ITGB1BP3), transcript variant 1, mRNAXM_586425PREDICTED: Bos taurus similar to caytaxin (LOC509463), mRNA4e-33DT721368, btcn12853, btcn12851, DV794523, DV797858, btcn12852 Bt.7034.1.S1_at Bt.7034.1.S1_at Bt.7034.1.S1_at Bt.7034.1.S1_at Bt.7034.1.S1_at Bt.7034.1.S1_at
12258:2519_CL15Contig1-A:fNM_001348 (325 bases away)Homo sapiens death-associated protein kinase 3 (DAPK3), mRNAXM_603859PREDICTED: Bos taurus similar to Death-associated protein kinase 3 (DAP kinase 3) (DAP-like kinase) (Dlk) (ZIP-kinase) (LOC525506), mRNA3e-28DV796222, btcn12828 Bt.11097.1.S1_at Bt.11097.1.S1_at
12259:11727_CL1Contig3-B:r
1225:6846_CL1Contig3-B:fNM_002437Homo sapiens MpV17 mitochondrial inner membrane protein (MPV17), nuclear gene encoding mitochondrial protein, mRNAXM_582102PREDICTED: Bos taurus similar to MpV17 transgene, murine homolog, glomerulosclerosis, transcript variant 1 (LOC505763), mRNA4e-33btcn15638, btcn15634, btcn15637, btcn15631, DV786585, btcn15636, btcn15632, btcn15635, CK834231, btcn15633 Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at Bt.11135.1.S1_at
12260:7236_CL3Contig1-B:rNM_015897Homo sapiens protein inhibitor of activated STAT, 4 (PIAS4), mRNAXM_883155PREDICTED: Bos taurus similar to protein inhibitor of activated STAT, 4, transcript variant 3 (LOC534722), mRNA6e-29btcn12862 Bt.9403.1.S1_at (367 bases away)
12261:20763_45065252-A:fNM_015898Homo sapiens zinc finger and BTB domain containing 7A (ZBTB7A), mRNAbtcn12863 Bt.15526.1.S1_at (490 bases away)
12263:14885_CL2Contig1-A:rNM_015898Homo sapiens zinc finger and BTB domain containing 7A (ZBTB7A), mRNAbtcn12861 Bt.15526.1.S1_at (6471 bases away)
12264:3171_CL1Contig4-B:rNM_001038071Bos taurus similar to mitogen-activated protein kinase kinase 2 (MGC134398), mRNA4e-33
12266:27021_51813151-A:fXM_114000 (2100 bases away)PREDICTED: Homo sapiens ankyrin repeat domain 24 (ANKRD24), mRNAXM_609033PREDICTED: Bos taurus similar to ankyrin repeat domain 24 (LOC530559), mRNA4e-33btcn12867 Bt.20904.1.A1_at (5886 bases away)
12267:16817_CL1Contig1-B:fNM_005755Homo sapiens Epstein-Barr virus induced gene 3 (EBI3), mRNAXM_592852PREDICTED: Bos taurus similar to Epstein-Barr virus induced gene 3 precursor (LOC514933), mRNA3e-28btcn12854, btcn12855 Bt.20904.1.A1_at Bt.20904.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12268:1086_CL2Contig1-B:rNM_018074Homo sapiens coiled-coil domain containing 94 (CCDC94), mRNAXM_592853PREDICTED: Bos taurus similar to CG8435-PA (LOC514934), mRNA4e-33btcn12848 Bt.19307.1.S1_at
12269:1032_CL1Contig2-B:fNM_001017974, NM_001017973, NM_004199Homo sapiens procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide II (P4HA2), transcript variant 1, mRNANM_001034293Bos taurus procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide II (P4HA2), mRNA4e-33btcn30912, DN517753, btcn30911, AV603556, DN524739 Bt.4381.1.A1_at Bt.4381.1.A1_at Bt.4381.1.A1_at, Bt.10813.1.S1_at Bt.4381.1.A1_at Bt.4381.1.A1_at
1226:9040_CL1Contig1-B:rNM_187841, NM_032546Homo sapiens tripartite motif-containing 54 (TRIM54), transcript variant 1, mRNANM_001017951Bos taurus tripartite motif-containing 54 (TRIM54), mRNA4e-33btcn15651, DV796235, DV795142, DV795047, DV792066, DV791669 Bt.9981.1.S1_at Bt.9981.1.S1_at Bt.9981.1.S1_at (42 bases away) Bt.9981.1.S1_at (842 bases away) Bt.9981.1.S1_at (842 bases away) Bt.9981.1.S1_at
12270:45506_CL1Contig1-A:rNM_005597, NM_205843Homo sapiens nuclear factor I/C (CCAAT-binding transcription factor) (NFIC), transcript variant 1, mRNANM_001024574Bos taurus nuclear factor I/C (NFIC), mRNA4e-33btcn6514, btcn6515 Bt.4934.2.A1_at, Bt.4934.1.A1_a_at Bt.4934.2.A1_at
12271:37044_CL1Contig1-A:fXM_587174PREDICTED: Bos taurus hypothetical LOC510079, transcript variant 1 (LOC510079), mRNA4e-33CK944258.1, btcn6519.1, DT823695.1
12272:1828_CL1Contig1-B:rNM_016263 (6991 bases away)Homo sapiens fizzy/cell division cycle 20 related 1 (Drosophila) (FZR1), mRNAXM_604893PREDICTED: Bos taurus similar to HEAT-like (PBS lyase) repeat containing 1 (LOC526521), mRNA4e-33btcn6522 Bt.10480.1.A1_at
12273:4421_CL2Contig1-B:rNM_001042680 (8967 bases away)Homo sapiens chromosome 19 open reading frame 28 (C19orf28), transcript variant 2, mRNANM_001037609Bos taurus similar to Fizzy-related protein homolog (Fzr) (Cdh1/Hct1 homolog) (MGC133845), mRNA4e-33btcn6524.1 Bt.26710.1.S1_at (7825 bases away)
12274:7340_CL1Contig1-B:rXM_605041PREDICTED: Bos taurus similar to F16H11.1 (LOC526668), mRNA4e-33
12276:39153_CL13Contig1-A:fNM_052843Homo sapiens obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (OBSCN), mRNAXM_588904PREDICTED: Bos taurus similar to obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (LOC511550), mRNA4e-33btcn23873 (7444 bases away)
12278:39153_CL16Contig1-A:fXM_290923 (5076 bases away)PREDICTED: Homo sapiens KIAA1639 protein (KIAA1639), mRNAXM_617349PREDICTED: Bos taurus similar to obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (LOC537193), mRNA4e-33btcn23868 Bt.25750.1.S1_at (111 bases away)
1227:1461_CL1Contig1-B:rNM_003459Homo sapiens solute carrier family 30 (zinc transporter), member 3 (SLC30A3), mRNAXM_590385PREDICTED: Bos taurus similar to solute carrier family 30 (zinc transporter), member 3 (LOC512803), mRNA4e-33btcn15657 Bt.9414.1.S1_at (9597 bases away)
12280:19021_16998828-B:fXM_290923PREDICTED: Homo sapiens KIAA1639 protein (KIAA1639), mRNAXM_585000PREDICTED: Bos taurus similar to obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (LOC508247), mRNA4e-24btcn23867 Bt.9012.1.S1_at
12281:45360_CL463Contig2-A:fNM_145214 (201 bases away)Homo sapiens tripartite motif-containing 11 (TRIM11), mRNAXM_592454PREDICTED: Bos taurus similar to tripartite motif-containing 11 (LOC514580), mRNA4e-33btcn23861 Bt.27002.1.S1_at
12282:45360_CL1319Contig1-B:fNM_016102, NM_001024941, NM_001024940Homo sapiens tripartite motif-containing 17 (TRIM17), transcript variant 1, mRNAbtcn23865, CB438365, btcn23863, btcn23864 Bt.18868.1.S1_at Bt.18868.1.S1_at Bt.18868.1.S1_at, Bt.18896.1.A1_at Bt.18868.1.S1_at, Bt.18896.1.A1_at
12283:6309_CL5Contig1-A:fNM_024760 (1181 bases away)Homo sapiens transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) (TLE6), mRNAXM_588822PREDICTED: Bos taurus similar to transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) (LOC511478), mRNA4e-33btcn45028 Bt.10952.2.S1_at (192 bases away)
12284:6309_CL4Contig1-B:rNM_003260 (975 bases away)Homo sapiens transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) (TLE2), mRNAbtcn45026.1, BI976158 Bt.10952.1.A1_at Bt.10952.1.A1_at
12285:6309_CL3Contig2-B:fNM_003260 (36 bases away)Homo sapiens transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) (TLE2), mRNAXM_870478PREDICTED: Bos taurus similar to Transducin-like enhancer protein 2 (ESG2) (LOC533595), mRNA4e-33btcn45024, btcn45025 Bt.20342.2.S1_a_at Bt.20342.2.S1_a_at
12286:652_CL3Contig2-B:rNM_002067Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class) (GNA11), mRNANM_174322Bos taurus GNA11 protein (GNA11), mRNA4e-33btcn45017, btcn45019 Bt.5511.1.S1_at Bt.5511.1.S1_at, Bt.1329.1.S1_at
12287:652_CL6Contig1-A:fNM_002068Homo sapiens guanine nucleotide binding protein (G protein), alpha 15 (Gq class) (GNA15), mRNAXM_870497PREDICTED: Bos taurus similar to Guanine nucleotide-binding protein, alpha-15 subunit (Galpha15) (G alpha-16) (LOC618175), mRNA4e-33btcn45422, CK832493 Bt.27662.1.S1_at Bt.27662.1.S1_at (8459 bases away)
12288:13020_51811413-A:fNM_182628Homo sapiens coiled-coil domain containing 37 (CCDC37), mRNAXM_597912PREDICTED: Bos taurus hypothetical LOC519687 (LOC519687), mRNA4e-33btcn23113 Bt.27098.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1228:8243_CL1Contig1-B:rNM_004341Homo sapiens carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase (CAD), mRNAXM_580350PREDICTED: Bos taurus similar to carbamoylphosphate synthetase 2/aspartate transcarbamylase/dihydroorotase (LOC504261), mRNA4e-33btcn15652, DY096571 Bt.9414.1.S1_at Bt.9414.1.S1_at
12290:30973_CL3Contig2-B:fNM_012190Homo sapiens aldehyde dehydrogenase 1 family, member L1 (ALDH1L1), mRNAXM_582002PREDICTED: Bos taurus similar to 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde dehydrogenase 1 family member L1) (LOC505677), mRNA4e-33btcn23108, btcn23107, CN439670 Bt.16218.1.A1_at Bt.16218.1.A1_at Bt.16218.1.A1_at (886 bases away)
12291:2838_CL2Contig1-B:fNM_001008485, NM_017836, NM_001008486, NM_001008487Homo sapiens solute carrier family 41, member 3 (SLC41A3), transcript variant 2, mRNAXM_602405PREDICTED: Bos taurus similar to solute carrier family 41, member 3 isoform 4 (LOC524085), mRNA4e-33DT850797, btcn23093 Bt.11277.1.A1_at (4098 bases away) Bt.11277.1.A1_at, Bt.11277.2.S1_at
12292:45360_CL174Contig2-B:rNM_006339Homo sapiens high-mobility group 20B (HMG20B), mRNANM_001038054Bos taurus similar to SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related (SMARCE1-related protein) (HMG domain protein HMG20B) (Structural DNA-binding protein BRAF35) (BRCA2-associated factor 35) (Sox-like tr... (MGC134468), mRNA4e-33btcn23096.1, btcn23099.1, btcn11338 Bt.13111.1.S1_at (66226 bases away) Bt.13111.1.S1_at (66156 bases away) Bt.13111.1.S1_at (65925 bases away)
12293:22952_CL1Contig1-B:rXM_944932, XM_928631, XM_941007, XM_933023, XM_944935, XM_933019, XM_944939, XM_944942, XM_933013, XM_933009PREDICTED: Homo sapiens chromosome 19 open reading frame 29, transcript variant 1 (C19orf29), mRNAXM_607390PREDICTED: Bos taurus similar to CG1676-PA (LOC528952), mRNA4e-33btcn23104 Bt.6435.1.A1_at (11837 bases away)
12294:1591_CL3Contig1-B:fNM_012398Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNAXM_585653PREDICTED: Bos taurus similar to phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (predicted) (LOC508819), mRNA4e-33btcn23111 Bt.6435.1.A1_at (5071 bases away)
12295:45360_CL177Contig3-B:fXM_612332PREDICTED: Bos taurus similar to Septin-8 (LOC540614), mRNA4e-33
12296:1070_CL1Contig1-B:rNM_001009185 (78022 bases away)Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 2, mRNANM_174027Bos taurus colony stimulating factor 2 (CSF2), mRNA4e-33btcn15599 Bt.509.1.S1_at
12297:5440_CL2Contig1-B:rNM_004886Homo sapiens amyloid beta (A4) precursor protein-binding, family A, member 3 (X11-like 2) (APBA3), mRNAXM_584210PREDICTED: Bos taurus tight junction protein 3 (zo3), partial mRNA4e-30btcn8206 Bt.29710.1.S1_at, Bt.29710.1.A1_at, Bt.8484.1.S1_at
12298:15066_CL1Contig3-B:fNM_004886Homo sapiens amyloid beta (A4) precursor protein-binding, family A, member 3 (X11-like 2) (APBA3), mRNANM_001034414Bos taurus similar to amyloid beta (A4) precursor protein-binding, family A, member 3 (MGC128191), mRNA4e-33BC103088, BI775936, btcn8202, btcn8200, btcn8201 Bt.2061.1.S1_at Bt.2061.1.S1_at Bt.2061.1.S1_at Bt.2061.1.S1_at Bt.2061.1.S1_at
12299:1055_CL1Contig1-A:rNM_172251 (637 bases away)Homo sapiens mitochondrial ribosomal protein L54 (MRPL54), nuclear gene encoding mitochondrial protein, mRNANM_001035105Bos taurus similar to mitochondrial ribosomal protein L54 (MGC128589), mRNA4e-33btcn8204, DV782967, btcn8203 Bt.22979.1.S1_at (1383 bases away) Bt.22979.1.S1_at (1205 bases away) Bt.22979.1.S1_at (84 bases away)
122:6300_CL1Contig1-B:fNM_006232Homo sapiens polymerase (RNA) II (DNA directed) polypeptide H (POLR2H), mRNAXM_581913PREDICTED: Bos taurus similar to polymerase (RNA) II (DNA directed) polypeptide H, transcript variant 1 (LOC505599), mRNA4e-33DV805949, btcn50057 Bt.2453.1.S1_at Bt.2453.1.S1_at
12300:34974_CL12Contig1-B:rNM_139354, NM_002378, NM_139355Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant 2, mRNANM_001035011Bos taurus megakaryocyte-associated tyrosine kinase isoform a (MATK), mRNA4e-33btcn8208, AW631595 Bt.24440.1.S1_at Bt.24440.1.S1_at
12301:8502_CL5Contig1-B:rXM_940014, XM_047610PREDICTED: Homo sapiens KIAA1086 (KIAA1086), mRNAXM_870714PREDICTED: Bos taurus similar to zinc finger RNA binding protein (LOC618380), partial mRNA4e-33btcn8205 Bt.24440.1.S1_at (23279 bases away)
12302:11514_CL1Contig1-A:rNM_144564, NM_213568Homo sapiens solute carrier family 39 (zinc transporter), member 3 (SLC39A3), transcript variant 1, mRNANM_001015521Bos taurus solute carrier family 39 (zinc transporter), member 3 (SLC39A3), mRNA4e-33btcn39146, btcn39144, btcn39145 Bt.19296.2.S1_a_at Bt.19296.2.S1_a_at, Bt.19296.1.S1_at Bt.19296.2.S1_a_at, Bt.19296.1.S1_at
12303:32199_7422778-A:fNM_145173Homo sapiens DIRAS family, GTP-binding RAS-like 1 (DIRAS1), mRNAXM_870720PREDICTED: Bos taurus similar to small GTP-binding tumor suppressor 1 (LOC618387), mRNA4e-33btcn686 Bt.26838.1.A1_at
12305:7628_163118-B:fNM_052847Homo sapiens guanine nucleotide binding protein (G protein), gamma 7 (GNG7), mRNAXM_870730PREDICTED: Bos taurus similar to guanine nucleotide binding protein, gamma 7 (LOC618399), mRNA2e-32CO884078, btcn671 Bt.29856.1.A1_at, Bt.29856.1.S1_at Bt.29856.1.A1_at, Bt.29856.1.S1_at
12306:6829_61943491-A:fXM_928228, XM_939777PREDICTED: Homo sapiens similar to leucine rich repeat neuronal 6C (LOC645191), mRNAXM_870754PREDICTED: Bos taurus similar to leucine rich repeat neuronal 6C (LOC618425), mRNA4e-33btcn684 Bt.3694.1.S1_at (15729 bases away)
12307:6857_CL1Contig2-B:rNM_004152Homo sapiens ornithine decarboxylase antizyme 1 (OAZ1), mRNANM_001025323Bos taurus ornithine decarboxylase antizyme 1-like (LOC506973), mRNA4e-33DV796489, DV792176, DV847186, btcn644, btcn646, DY169528, DV791552, BM251300, DV798402, CN435354, DN823980, CR550342, btcn647 Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at Bt.3694.1.S1_at
12308:4141_CL1Contig1-A:fNM_032482Homo sapiens DOT1-like, histone H3 methyltransferase (S. cerevisiae) (DOT1L), mRNAXM_587582PREDICTED: Bos taurus similar to DOT1-like, histone H3 methyltransferase, transcript variant 1 (LOC510442), mRNA6e-26btcn665 Bt.26580.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12309:18655_CL1Contig1-B:fNM_018049Homo sapiens pleckstrin homology domain containing, family J member 1 (PLEKHJ1), mRNANM_001034569Bos taurus pleckstrin homology domain containing, family J member 1 (PLEKHJ1), mRNA4e-33btcn660, DV918050, AW658537, btcn659, btcn661, btcn658 Bt.3911.1.S1_at Bt.3911.1.S1_at Bt.3911.1.S1_at Bt.3911.1.S1_at Bt.3911.1.S1_at Bt.3911.1.S1_at
12310:45536_CL2Contig1-B:rNM_173890Bos taurus anti-Mullerian hormone (AMH), mRNA4e-33
12311:11639_CL1Contig1-B:rXM_586321PREDICTED: Bos taurus similar to homolog of mouse skeletal muscle sarcoplasmic reticulum protein JP-45 (LOC509378), mRNA4e-33
12312:5234_CL1Contig2-B:fNM_003938Homo sapiens adaptor-related protein complex 3, delta 1 subunit (AP3D1), mRNANM_173998Bos taurus adaptor-related protein complex 3, delta 1 subunit (AP3D1), mRNA4e-33btcn651 Bt.5475.1.S1_at
12313:35866_17891554-B:fNM_001039846, NM_001031735Homo sapiens chromosome 19 open reading frame 36 (C19orf36), transcript variant 1, mRNAXM_611348PREDICTED: Bos taurus hypothetical LOC510569, transcript variant 1 (LOC510569), mRNA4e-33DT848026, btcn676 Bt.5475.1.S1_at (1528 bases away) Bt.5475.1.S1_at (1537 bases away)
12314:22061_15776788-A:fNM_130807Homo sapiens MOB1, Mps One Binder kinase activator-like 2A (yeast) (MOBKL2A), mRNANM_001034229Bos taurus MOB-LAK (MOBKL2A), mRNA7e-32btcn662, btcn663 Bt.9159.1.S1_at (7653 bases away) Bt.9159.1.S1_at
12315:22061_CL4Contig1-B:rNM_017572, NM_199054Homo sapiens MAP kinase interacting serine/threonine kinase 2 (MKNK2), transcript variant 1, mRNAXM_883261PREDICTED: Bos taurus similar to MAP kinase-interacting serine/threonine kinase 2 (predicted), transcript variant 5 (LOC538519), mRNA4e-33btcn675 Bt.20588.1.S1_at (1298 bases away)
12317:2191_CL1Contig1-B:rNM_003021Homo sapiens small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha (SGTA), mRNANM_001038030Bos taurus similar to small glutamine-rich tetratricopeptide (MGC134165), mRNA4e-33btcn31704, DV910701, btcn31706, btcn31705 Bt.20203.1.S1_at Bt.20203.1.S1_at (83 bases away) Bt.20203.1.S1_at (410 bases away) Bt.20203.1.S1_at (76 bases away)
12318:4273_CL1Contig1-B:fNM_003249Homo sapiens thimet oligopeptidase 1 (THOP1), mRNAbtcn31708, BF890267 Bt.21827.1.A1_s_at, Bt.21827.2.S1_at Bt.21827.2.S1_at
1231:2903_29258820-B:fNM_016085, NM_080592Homo sapiens chromosome 2 open reading frame 28 (C2orf28), transcript variant 1, mRNAXM_868880PREDICTED: Bos taurus similar to apoptosis related protein 3 isoform a (LOC616771), mRNA4e-30DV846649, CB452438, btcn15643, AW464641, DV800018 Bt.6156.1.S1_at Bt.6156.1.S1_at Bt.6156.1.S1_at Bt.6156.1.S1_at Bt.6156.1.S1_at
12320:31957_28153197-A:rNM_181705Homo sapiens chromosome 5 open reading frame 31 (C5orf31), mRNAXM_870785PREDICTED: Bos taurus hypothetical protein LOC618451 (LOC618451), partial mRNA3e-31btcn14425, CB167072, btcn14426, DT841013 Bt.4505.1.S1_at (6299 bases away) Bt.4505.1.S1_at (27270 bases away) Bt.4505.1.S1_at (6314 bases away) Bt.4505.1.S1_at (6330 bases away)
12322:29294_CL4Contig1-B:rNM_016340Homo sapiens Rap guanine nucleotide exchange factor (GEF) 6 (RAPGEF6), mRNAbtcn14424 Bt.19994.1.S1_at
12323:29294_11917476-C:fXM_868143PREDICTED: Bos taurus similar to Rap guanine nucleotide exchange factor 6 (PDZ domain containing guanine nucleotide exchange factor 2) (PDZ-GEF2) (RA-GEF-2) (LOC616176), partial mRNA2e-19BF652346.1
12324:29294_CL5Contig1-A:rNM_133372, NM_001008738Homo sapiens folliculin-interacting protein 1 (FNIP1), transcript variant 1, mRNAXM_601336PREDICTED: Bos taurus similar to CG3764-PA (LOC523042), partial mRNA4e-33btcn14427 Bt.28074.1.S1_at
12325:7481_61945949-B:rNM_133638Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 19 (ADAMTS19), mRNAXM_618150PREDICTED: Bos taurus similar to ADAM metallopeptidase with thrombospondin type 1 motif, 19 preproprotein (LOC537961), partial mRNA4e-33btcn53685 Bt.25304.1.A1_at (56897 bases away)
12326:14510_55724643-A:fNM_133638 (19793 bases away)Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 19 (ADAMTS19), mRNACV798968 Bt.25304.1.A1_at (31608 bases away)
12328:1162_49429477-A:fNM_175856Homo sapiens chondroitin sulfate synthase 3 (CSS3), mRNAXM_606561PREDICTED: Bos taurus similar to chondroitin sulfate synthase 3 (LOC528149), mRNA4e-33btcn53684 Bt.25304.1.A1_at (376383 bases away)
12329:45360_CL578Contig1-A:fNM_023007 (32150 bases away)Homo sapiens jumonji domain containing 4 (JMJD4), mRNAXM_587173PREDICTED: Bos taurus similar to zinc finger protein 354B (LOC510078), mRNA4e-33btcn7126 Bt.24368.1.S1_at (30730 bases away)
1232:17259_CL1Contig2-B:fNM_021095Homo sapiens solute carrier family 5 (sodium-dependent vitamin transporter), member 6 (SLC5A6), mRNAXM_867079PREDICTED: Bos taurus similar to solute carrier family 5 (sodium-dependent vitamin transporter), member 6, transcript variant 2 (LOC516021), mRNA4e-33btcn15644, DV820433 Bt.22998.1.S1_at, Bt.29369.1.A1_at Bt.22998.1.S1_at (838 bases away)
12330:19865_7031606-A:fNM_030640Homo sapiens dual specificity phosphatase 16 (DUSP16), mRNAXM_870975PREDICTED: Bos taurus similar to Dual specificity protein phosphatase 16 (Mitogen-activated protein kinase phosphatase 7) (MAP kinase phosphatase 7) (MKP-7) (LOC618644), mRNA4e-33btcn11962, AW461438 Bt.14051.1.S1_at (2934 bases away) Bt.14051.1.S1_at (2927 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12332:19865_CL2Contig1-A:rNM_030640Homo sapiens dual specificity phosphatase 16 (DUSP16), mRNAXM_870975PREDICTED: Bos taurus similar to Dual specificity protein phosphatase 16 (Mitogen-activated protein kinase phosphatase 7) (MAP kinase phosphatase 7) (MKP-7) (LOC618644), mRNA4e-33btcn7127 Bt.14051.1.S1_at
12333:12906_CL1Contig1-B:rNM_058169Homo sapiens loss of heterozygosity, 12, chromosomal region 1 (LOH12CR1), mRNAXM_865996PREDICTED: Bos taurus similar to LOH1CR12, transcript variant 1 (LOC614947), mRNA4e-33btcn7125 Bt.21460.1.S1_at
12334:20270_CL1Contig2-B:fNM_001031703Homo sapiens transmembrane protein 103 (TMEM103), mRNAXM_590579PREDICTED: Bos taurus hypothetical LOC512966 (LOC512966), mRNA4e-33btcn25207 Bt.17645.1.A1_at (1130 bases away)
12335:11146_CL1Contig1-B:fNM_006574Homo sapiens chondroitin sulfate proteoglycan 5 (neuroglycan C) (CSPG5), mRNAXM_582227PREDICTED: Bos taurus similar to chondroitin sulfate proteoglycan 5 (neuroglycan C) (LOC505866), mRNA4e-33btcn25204 Bt.27313.1.A1_at
12336:37222_CL5Contig1-B:fNM_001009185, NM_015256Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 1, mRNANM_001038042Bos taurus acyl-CoA synthetase long-chain family member 6 (ACSL6), mRNA4e-33DV838356, btcn25201, AV667083 Bt.11904.1.S1_at Bt.11904.1.S1_at Bt.11904.1.S1_at
12337:2078_CL1Contig1-B:fXM_928288, NM_003687Homo sapiens PDZ and LIM domain 4 (PDLIM4), mRNANM_001034491Bos taurus PDZ and LIM domain 4 (PDLIM4), mRNA4e-33btcn30321, btcn30911, btcn30320, btcn30319 Bt.10813.1.S1_at Bt.4381.1.A1_at, Bt.10813.1.S1_at Bt.10813.1.S1_at Bt.10813.1.S1_at
12338:7490_CL1Contig1-B:fXM_615386PREDICTED: Bos taurus similar to solute carrier family 22 member 5 (LOC541266), mRNA4e-33
12339:19139_CL1Contig1-A:fNM_003060 (90934 bases away)Homo sapiens solute carrier family 22 (organic cation transporter), member 5 (SLC22A5), mRNAbtcn30322, DT818871, btcn30323 Bt.10077.1.S3_at, Bt.10077.1.S2_at Bt.10077.1.S3_at, Bt.10077.1.S2_at Bt.10077.1.S3_at, Bt.10077.1.S2_at
1233:5106_CL1Contig2-A:rNM_018158Homo sapiens solute carrier family 4 (anion exchanger), member 1, adaptor protein (SLC4A1AP), mRNAbtcn55056, btcn35607.1 Bt.24885.1.A1_at Bt.24885.1.A1_at
12340:1063_CL2Contig1-A:fNM_016052 (2345 bases away)Homo sapiens CGI-115 protein (CGI-115), mRNAbtcn30328, btcn5540 Bt.19881.1.S1_at, Bt.19881.2.A1_at Bt.19881.1.S1_at, Bt.19881.2.A1_at
12341:29828_10171721-B:fNM_153223Homo sapiens coiled-coil domain containing 100 (CCDC100), mRNAXM_614154PREDICTED: Bos taurus similar to CG6014-PA (LOC534400), mRNA4e-33btcn5150 Bt.24448.1.A1_at (29407 bases away)
12342:40691_CL1Contig2-B:fNM_001038603Homo sapiens MARVEL domain containing 2 (MARVELD2), transcript variant 1, mRNAXM_582435PREDICTED: Bos taurus similar to nuclear receptor binding SET domain protein 1 isoform b (LOC506044), partial mRNA4e-33btcn37993.1 Bt.11047.1.S1_at, Bt.11047.2.S1_at
12344:1970_CL1Contig6-B:rNM_130781, NM_001031677Homo sapiens RAB24, member RAS oncogene family (RAB24), transcript variant 2, mRNANM_001034802Bos taurus similar to RAB24, member RAS oncogene family (predicted) (MGC127026), mRNA4e-33btcn37980, btcn37972, btcn37978, btcn37973, btcn37977, btcn37979, btcn37974 Bt.5038.5.S1_at Bt.5038.5.S1_at Bt.5038.5.S1_at Bt.5038.5.S1_at, Bt.18039.1.S1_at Bt.5038.5.S1_at Bt.5038.5.S1_at Bt.5038.5.S1_at
12345:18752_CL1Contig4-B:rXM_945775, XR_001020, NR_003131, XR_001022, XM_942189, XM_945774, NM_013237, XR_001021PREDICTED: Homo sapiens PX19 protein pseudogene, transcript variant 1 (LOC388955), misc RNANM_001038138Bos taurus px19-like protein (PX19), mRNA4e-33CK831613, DV784732, CB431576, btcn37988, btcn37991, CK969964, btcn37989, DV783480, btcn37990, CB422790.1, btcn37992 Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at (59 bases away) Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at Bt.20145.1.S1_at
12346:11425_CL1Contig4-B:fNM_031300Homo sapiens MAX dimerization protein 3 (MXD3), mRNAXM_883276PREDICTED: Bos taurus similar to MAX dimerization protein 3, transcript variant 4 (LOC533359), mRNA4e-33btcn38017, btcn38018, btcn38016 Bt.26896.2.S1_a_at, Bt.26896.1.S1_at, Bt.26896.2.S1_at Bt.26896.2.S1_a_at, Bt.26896.1.S1_at, Bt.26896.2.S1_at Bt.26896.2.S1_a_at, Bt.26896.1.S1_at, Bt.26896.2.S1_at
12347:6583_7034011-B:fNM_006816Homo sapiens lectin, mannose-binding 2 (LMAN2), mRNAXM_612742PREDICTED: Bos taurus similar to MAX dimerization protein 3, transcript variant 1 (LOC533359), mRNA4e-33btcn38010, CR552996, AW463843, BF042440, DN539957 Bt.4643.1.S1_at Bt.4643.1.S1_at Bt.4643.1.S1_at (4131 bases away) Bt.4643.1.S1_at (3975 bases away) Bt.4643.1.S1_at
12348:36812_CL6Contig1-B:rNM_006480Homo sapiens regulator of G-protein signalling 14 (RGS14), mRNAXM_611732PREDICTED: Bos taurus similar to Regulator of G-protein signaling 14 (RGS14), transcript variant 1 (LOC532605), mRNA4e-33btcn38026 Bt.27074.1.A1_at
12349:12108_9734446-A:rNM_003052Homo sapiens solute carrier family 34 (sodium phosphate), member 1 (SLC34A1), mRNAXM_883312PREDICTED: Bos taurus solute carrier family 34, member 1, transcript variant 6 (SLC34A1), mRNA4e-33btcn38034 Bt.12763.1.S1_at, Bt.12763.1.A1_at
1234:1484_CL1Contig2-A:fNM_004891Homo sapiens mitochondrial ribosomal protein L33 (MRPL33), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_879645PREDICTED: Bos taurus similar to mitochondrial ribosomal protein L33 isoform a, transcript variant 3 (LOC614711), mRNA4e-33CK978588.2, btcn7538.3, btcn55057.2, btcn55059.3 Bt.23704.1.A1_at (330231 bases away) Bt.23704.1.A1_at (330132 bases away) Bt.23704.1.A1_at (330132 bases away) Bt.23704.1.A1_at (330435 bases away)
12350:45360_CL1Contig19-B:fXM_870535PREDICTED: Bos taurus coagulation factor XII, transcript variant 2 (F12), mRNA4e-33btcn38011.1 Bt.268.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12351:36812_CL2Contig1-B:rNM_001004105, NM_001004106, NM_002082Homo sapiens G protein-coupled receptor kinase 6 (GRK6), transcript variant 2, mRNAXM_883316PREDICTED: Bos taurus similar to G protein-coupled receptor kinase 6 (G protein-coupled receptor kinase GRK6), transcript variant 3 (LOC521413), mRNA4e-33btcn38021 Bt.7416.2.S1_at, Bt.7416.1.S1_at
12352:20269_46415766-A:fNM_030567Homo sapiens proline rich 7 (synaptic) (PRR7), mRNAXM_581693PREDICTED: Bos taurus similar to proline rich 7 (synaptic) (LOC538641), mRNA4e-33CN436502 Bt.21731.1.S1_at (876 bases away)
12353:10945_CL2Contig2-B:fNM_080881, NM_004395Homo sapiens drebrin 1 (DBN1), transcript variant 1, mRNAXM_870568PREDICTED: Bos taurus similar to Drebrin (Developmentally regulated brain protein), transcript variant 2 (LOC505406), mRNA4e-33CN437508, btcn37982, btcn37981, DT813940, CV980057 Bt.21731.2.S1_a_at, Bt.21731.1.S1_at Bt.21731.2.S1_a_at, Bt.21731.1.S1_at Bt.21731.2.S1_a_at, Bt.21731.1.S1_at Bt.21731.2.S1_a_at Bt.21731.2.S1_a_at, Bt.21731.1.S1_at
12354:10945_CL3Contig1-B:fNM_080881, NM_004395Homo sapiens drebrin 1 (DBN1), transcript variant 1, mRNAXM_870568PREDICTED: Bos taurus similar to Drebrin (Developmentally regulated brain protein), transcript variant 2 (LOC505406), mRNA1e-30btcn37981, CV980057 Bt.21731.2.S1_a_at, Bt.21731.1.S1_at Bt.21731.2.S1_a_at, Bt.21731.1.S1_at
12355:6144_CL1Contig1-B:fNM_213636, NM_203352, NM_005451Homo sapiens PDZ and LIM domain 7 (enigma) (PDLIM7), transcript variant 1, mRNANM_001017947Bos taurus PDZ and LIM domain 7 (PDLIM7), mRNA4e-33DV894050, btcn38004, btcn38008, btcn38006, BF774496, DV797767, btcn38003, btcn38005, btcn38007, btcn38002 Bt.9949.3.S1_a_at Bt.9949.2.S1_at, Bt.9949.3.S1_a_at Bt.9949.2.S1_at, Bt.9949.3.S1_a_at Bt.9949.3.S1_a_at Bt.9949.3.S1_a_at Bt.9949.2.S1_at, Bt.9949.3.S1_a_at Bt.9949.2.S1_at, Bt.9949.3.S1_a_at Bt.9949.3.S1_a_at Bt.9949.2.S1_at, Bt.9949.1.S1_at, Bt.9949.3.S1_a_at Bt.9949.2.S1_at, Bt.9949.3.S1_a_at
12356:24976_45486555-B:fNM_024872Homo sapiens docking protein 3 (DOK3), mRNAXM_592810PREDICTED: Bos taurus similar to docking protein 3 (LOC514894), mRNA4e-33btcn38030 Bt.5258.1.S1_at (1969 bases away)
12357:25933_CL2Contig1-B:rNM_016222Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (DDX41), mRNAXM_883326PREDICTED: Bos taurus similar to Probable ATP-dependent helicase DDX41 (DEAD-box protein 41) (DEAD-box protein abstrakt homolog), transcript variant 5 (LOC505276), mRNA4e-33btcn37999, btcn38000 Bt.5258.1.S1_at Bt.5258.1.S1_at
12358:16782_CL1Contig1-B:rNM_016222 (7236 bases away)Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 (DDX41), mRNAXM_581815PREDICTED: Bos taurus similar to C50F7.5 (LOC538655), mRNA4e-33btcn37983 Bt.26543.1.S1_a_at
12359:4658_CL3Contig1-B:rXM_940793 (20430 bases away)PREDICTED: Homo sapiens similar to eukaryotic translation elongation factor 1 alpha 2, transcript variant 1 (LOC649150), mRNAXM_586087PREDICTED: Bos taurus similar to transmembrane emp24 protein transport domain containing 9 (LOC509184), mRNA4e-33btcn38025, DV873306 Bt.8094.1.S1_at (30483 bases away) Bt.8094.1.S1_at (29875 bases away)
1235:18877_CL1Contig2-A:fNM_032604Homo sapiens abhydrolase domain containing 1 (ABHD1), mRNANM_001035094Bos taurus similar to abhydrolase domain containing 1 (predicted) (MGC127615), mRNA4e-33BM104786, btcn35407, btcn35410, CN788735, CR849218, CK958912, btcn35406 Bt.22056.1.S1_a_at Bt.22056.2.S1_a_at, Bt.11449.1.S1_at, Bt.22056.1.S1_a_at Bt.22056.2.S1_a_at, Bt.11449.1.S1_at, Bt.22056.1.S1_a_at Bt.22056.2.S1_a_at Bt.22056.1.S1_a_at Bt.22056.2.S1_a_at, Bt.22056.1.S1_a_at Bt.22056.2.S1_a_at, Bt.11449.1.S1_at, Bt.22056.1.S1_a_at
12360:4658_CL1Contig1-B:fNM_017510Homo sapiens transmembrane emp24 protein transport domain containing 9 (TMED9), mRNANM_001034812Bos taurus transmembrane emp24 protein transport domain containing 9 (TMED9), mRNA4e-33btcn37987 Bt.8094.1.S1_at
12361:36597_CL1Contig1-B:rNM_007255 (211 bases away)Homo sapiens xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) (B4GALT7), mRNAXM_883330PREDICTED: Bos taurus similar to xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I), transcript variant 5 (LOC507559), mRNA4e-33btcn38013 Bt.8868.1.S1_at
12362:1685_45486646-A:fNM_015111Homo sapiens Nedd4 binding protein 3 (N4BP3), mRNAXM_590649PREDICTED: Bos taurus similar to Nedd4-binding protein 3 (N4BP3) (LOC513032), mRNA4e-33CK968672 Bt.29365.1.A1_at (221 bases away)
12363:9859_CL1Contig1-B:rNM_022762Homo sapiens required for meiotic nuclear division 5 homolog B (S. cerevisiae) (RMND5B), mRNAXM_883340PREDICTED: Bos taurus similar to CG3295-PA, transcript variant 9 (LOC515291), mRNA4e-33btcn37994 Bt.5446.1.S1_at
12364:5723_CL1Contig1-B:rNM_001034833, NM_017838Homo sapiens nucleolar protein family A, member 2 (H/ACA small nucleolar RNPs) (NOLA2), transcript variant 1, mRNANM_001015626Bos taurus nucleolar protein family A, member 2 (NOLA2), mRNA4e-33AJ697089, CK778934, BE666779, btcn38001 Bt.12966.1.S1_at Bt.12966.1.S1_at Bt.12966.1.S1_at Bt.12966.1.S1_at
12365:45360_7053734-B:fNM_173465Homo sapiens collagen, type XXIII, alpha 1 (COL23A1), mRNAXM_864013PREDICTED: Bos taurus similar to procollagen, type XXIII, alpha 1 (LOC613347), mRNA4e-33btcn12621 Bt.6492.1.S1_at (35732 bases away)
12366:36493_CL3Contig1-B:rNM_004499 (1421 bases away)Homo sapiens heterogeneous nuclear ribonucleoprotein A/B (HNRPAB), transcript variant 2, mRNAXM_617398PREDICTED: Bos taurus similar to CG8745-PA (LOC537241), mRNA4e-33CB062628, btcn12618 Bt.6492.1.S1_at Bt.6492.1.S1_at
12367:2987_CL2Contig2-A:rNM_004499, NM_031266Homo sapiens heterogeneous nuclear ribonucleoprotein A/B (HNRPAB), transcript variant 2, mRNAXM_589726PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein A/B (LOC539830), mRNA4e-33btcn15312, btcn12614, btcn12615, btcn12613, DV816968 Bt.3928.1.S1_at Bt.3928.1.S1_at Bt.3928.1.S1_at (170 bases away) Bt.3928.1.S1_at Bt.3928.1.S1_at
12368:8421_CL1Contig1-A:fNM_002406Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), mRNANM_001015653Bos taurus N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I (MGAT1), mRNA4e-33btcn41725.1 Bt.8583.1.S1_at
12369:3339_CL2Contig1-B:fNM_016048Homo sapiens isochorismatase domain containing 1 (ISOC1), mRNAXM_611901PREDICTED: Bos taurus similar to isochorismatase domain containing 1, transcript variant 3 (LOC540524), mRNA4e-33DV778384, DV893533, btcn17563, DV775771 Bt.26921.1.A1_at (102645 bases away) Bt.26921.1.A1_at (103122 bases away) Bt.26921.1.A1_at (102088 bases away) Bt.26921.1.A1_at (102346 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1236:5554_CL1Contig2-B:rNM_013388Homo sapiens prolactin regulatory element binding (PREB), mRNAXM_603605PREDICTED: Bos taurus similar to Prolactin regulatory element-binding protein (Mammalian guanine nucleotide exchange factor mSec12) (LOC525256), mRNA4e-33DN277720, btcn35408, CB418701 Bt.11449.1.S1_at Bt.11449.1.S1_at, Bt.22056.1.S1_a_at Bt.11449.1.S1_at
12370:45360_CL724Contig1-B:fNM_001999Homo sapiens fibrillin 2 (congenital contractural arachnodactyly) (FBN2), mRNAbtcn17565 Bt.4793.1.S2_at (54555 bases away)
12372:19049_CL1Contig1-B:fNM_032177Homo sapiens RNA U, small nuclear RNA export adaptor (phosphorylation regulated) (RNUXA), mRNAXM_584089PREDICTED: Bos taurus similar to RNA U, small nuclear RNA export adaptor (phosphorylation regulated) (LOC507478), mRNA4e-33btcn50365, DV780928 Bt.13713.1.A1_at, Bt.13713.2.S1_at Bt.13713.1.A1_at, Bt.13713.2.S1_at
12373:30973_CL6Contig1-B:rNM_001182Homo sapiens aldehyde dehydrogenase 7 family, member A1 (ALDH7A1), mRNAXM_584088PREDICTED: Bos taurus similar to antiquitin (LOC507477), mRNA1e-30btcn50366 Bt.22086.3.S1_at
12374:6639_CL1Contig1-B:rNM_023927Homo sapiens GRAM domain containing 3 (GRAMD3), mRNAXM_581942PREDICTED: Bos taurus similar to CG3304-PA, isoform A (LOC505627), mRNA4e-33btcn50369, CB445055 Bt.26108.1.A1_at, Bt.3577.1.S1_at Bt.26108.1.A1_at
12375:9165_CL1Contig1-B:fNM_000856Homo sapiens guanylate cyclase 1, soluble, alpha 3 (GUCY1A3), mRNANM_175778Bos taurus guanylate cyclase 1, soluble, alpha 3 (GUCY1A3), mRNA4e-33btcn25464 Bt.4480.1.S1_at, Bt.4480.1.S2_at
12376:25692_CL1Contig1-B:rXM_937753 (6676 bases away)PREDICTED: Homo sapiens PR domain containing 6 (PRDM6), mRNAXM_598088PREDICTED: Bos taurus similar to PR-domain zinc finger protein 6 (LOC519857), mRNA4e-33btcn31105 Bt.20593.2.S1_at (154315 bases away)
12377:1594_CL2Contig1-B:rNM_000943 (4534 bases away)Homo sapiens peptidylprolyl isomerase C (cyclophilin C) (PPIC), mRNAXM_615596PREDICTED: Bos taurus similar to Peptidyl-prolyl cis-trans isomerase C (PPIase) (Rotamase) (Cyclophilin C) (LOC535494), mRNA4e-33btcn31104 Bt.20593.1.A1_at, Bt.20593.2.S1_at
12378:1374_CL2Contig1-A:fNM_000943 (77894 bases away)Homo sapiens peptidylprolyl isomerase C (cyclophilin C) (PPIC), mRNAXM_865475PREDICTED: Bos taurus similar to Sorting nexin-24 (LOC614112), mRNA4e-33DY047150, btcn31102, btcn31099 Bt.19263.1.S1_at (59010 bases away) Bt.19263.1.S1_at Bt.19263.1.S1_at
12379:2886_CL2Contig1-B:rNM_003100Homo sapiens sorting nexin 2 (SNX2), mRNANM_001038519Bos taurus sorting nexin 2 (SNX2), mRNA4e-33btcn31096 Bt.26946.1.S1_at
1237:25254_10757296-A:fNM_178553Homo sapiens hypothetical protein MGC44505 (MGC44505), mRNABF040241 Bt.11449.1.S1_at (4561 bases away)
12380:3458_CL1Contig1-B:fXM_940399, NM_207308, XM_499457Homo sapiens nucleoporin 210kDa-like (NUP210L), mRNANM_176653Bos taurus ADP-ribosylation factor 1 (ARF1), mRNA4e-33CB466034.1, btcn33173.1, DV879197.1, btcn33171.1, DV796870.1, btcn15453.1 Bt.22834.1.S1_at (45973 bases away) Bt.22834.1.S1_at (45708 bases away) Bt.22834.1.S1_at (45714 bases away) Bt.22834.1.S1_at (45639 bases away) Bt.22834.1.S1_at (46040 bases away) Bt.22834.1.S1_at (45701 bases away)
12381:16732_CL1Contig3-A:rNM_024319 (88 bases away)Homo sapiens chromosome 1 open reading frame 35 (C1orf35), mRNANM_001034272Bos taurus chromosome 1 open reading frame 35 (C1orf35), mRNA4e-33btcn33186, BF076228, btcn33185 Bt.2823.3.S1_a_at, Bt.2823.1.S1_a_at, Bt.2823.1.S1_at, Bt.2823.2.S1_at Bt.2823.1.S1_a_at, Bt.2823.1.S1_at, Bt.2823.2.S1_at Bt.2823.3.S1_a_at, Bt.2823.1.S1_a_at, Bt.2823.1.S1_at, Bt.2823.2.S1_at
12382:21789_CL1Contig2-A:fNM_181441, NM_181462, NM_181455, NM_181456, NM_181464, NM_181463, NM_181454, NM_181465Homo sapiens mitochondrial ribosomal protein L55 (MRPL55), nuclear gene encoding mitochondrial protein, transcript variant 8, mRNAXM_878286PREDICTED: Bos taurus similar to mitochondrial ribosomal protein L55, transcript variant 3 (LOC506657), mRNA1e-30btcn33181, AV589572, btcn33179, btcn33174 Bt.4652.1.S1_at, Bt.4287.1.A1_at Bt.4652.1.S1_at Bt.4652.1.S1_at Bt.4652.1.S1_at
12383:8119_CL1Contig1-B:rNM_000858Homo sapiens guanylate kinase 1 (GUK1), mRNANM_174078Bos taurus guanylate kinase 1 (GUK1), mRNA4e-33btcn33182, btcn33181, btcn33177, btcn33178, AW660091, btcn33175, btcn33176, DN534692 Bt.4287.1.A1_at Bt.4652.1.S1_at, Bt.4287.1.A1_at Bt.4287.1.A1_at Bt.4287.1.A1_at Bt.4287.1.A1_at Bt.4287.1.A1_at Bt.4287.1.A1_at Bt.4287.1.A1_at
12384:7031_CL1Contig1-B:rXM_582394PREDICTED: Bos taurus similar to CG8043-PA (LOC506009), mRNA4e-33
12385:8423_CL2Contig1-B:rNM_152546 (246 bases away)Homo sapiens serum response factor binding protein 1 (SRFBP1), mRNAbtcn21567 Bt.8948.1.S1_at (30746 bases away)
12386:16823_CL1Contig1-B:fNM_002317Homo sapiens lysyl oxidase (LOX), mRNANM_173932Bos taurus lysyl oxidase (LOX), mRNA4e-33DV778458, btcn21564, btcn21565 Bt.8948.1.S1_at Bt.8948.1.S1_at Bt.8948.1.S1_at
12387:175_CL1Contig1-A:fNM_020796Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A (SEMA6A), mRNAXM_873108PREDICTED: Bos taurus similar to sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A, transcript variant 5 (LOC516019), mRNA4e-33btcn43949 Bt.17078.1.S1_at, Bt.24434.1.A1_at
12388:9370_CL1Contig1-B:rNM_173664Homo sapiens ADP-ribosylation factor-like 10 (ARL10), mRNAbtcn19404, DV801579 Bt.10847.1.S1_at (4384 bases away) Bt.10847.1.S1_at (4632 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12389:3073_CL1Contig1-B:rNM_016391Homo sapiens hypothetical protein HSPC111 (HSPC111), mRNANM_001014856Bos taurus similar to hypothetical protein HSPC111 (HSPC111), mRNA4e-33btcn19398, DV838223, DV832974 Bt.8324.1.S1_at Bt.8324.1.S1_at Bt.8324.1.S1_at
12390:15762_CL1Contig1-B:fXM_582867PREDICTED: Bos taurus similar to CG9921-PA (LOC506420), mRNA4e-33
12391:1620_CL1Contig3-B:rNM_174277Bos taurus clathrin, light polypeptide B (light chain B) (CLTLB), mRNA4e-33
12392:32433_6843565-A:fNM_133369Homo sapiens unc-5 homolog A (C. elegans) (UNC5A), mRNAXM_582427PREDICTED: Bos taurus similar to netrin receptor Unc5h1 (LOC506037), mRNA4e-33AW345855 Bt.25382.1.A1_at (2156 bases away)
12393:5299_CL1Contig1-B:fNM_014613Homo sapiens UBX domain containing 8 (UBXD8), mRNAbtcn5070, btcn5071 Bt.26767.1.S1_at Bt.26767.1.S1_at
12395:3105_CL1Contig1-B:fNM_014901Homo sapiens ring finger protein 44 (RNF44), mRNAXM_610473PREDICTED: Bos taurus similar to ring finger protein 44 (LOC531968), mRNA4e-33btcn5075 Bt.6313.1.S1_at
12396:7670_CL1Contig1-B:fNM_052899 (3559 bases away)Homo sapiens G protein-regulated inducer of neurite outgrowth 1 (KIAA1893), mRNAXM_589349PREDICTED: Bos taurus similar to protocadherin LKC precursor (LOC511921), mRNA1e-30btcn5076 Bt.28737.1.A1_at, Bt.28737.2.S1_at
12397:42100_CL1Contig1-A:fXM_595552PREDICTED: Bos taurus similar to G protein-regulated inducer of neurite outgrowth 1 (LOC517383), mRNA4e-33
12398:16267_CL3Contig1-A:fNM_003085, NM_001001502Homo sapiens synuclein, beta (SNCB), transcript variant 2, mRNAXM_585191PREDICTED: Bos taurus similar to synuclein, beta (LOC508421), mRNA4e-33btcn5069 Bt.21126.1.S1_at, Bt.21126.2.S1_at
12399:22_CL3Contig1-B:fNM_001006616, NM_130465, NM_012171Homo sapiens tetraspanin 17 (TSPAN17), transcript variant 1, mRNANM_001014880Bos taurus transmembrane 4 superfamily member 17 isoform b (TM4SF17), mRNA4e-33btcn5078, btcn5079 Bt.26646.1.S1_at Bt.12360.1.S1_at, Bt.26646.1.S1_at
1239:27851_CL1Contig1-B:fNM_175769 (1864 bases away)Homo sapiens transcription factor 23 (TCF23), mRNANM_001038216Bos taurus similar to transcription factor 23 (MGC134543), mRNA4e-33btcn35411 Bt.11449.1.S1_at (22205 bases away)
12400:21581_10165391-B:fNM_001014990, NM_014180Homo sapiens mitochondrial ribosomal protein L22 (MRPL22), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNANM_001035454Bos taurus similar to mitochondrial ribosomal protein L22 isoform a (MGC127975), mRNA4e-33btcn5066, btcn5067 Bt.17490.1.S1_a_at Bt.17490.1.S1_a_at, Bt.9758.1.S1_at
12402:5712_CL1Contig1-B:rNM_012292 (1814 bases away)Homo sapiens histocompatibility (minor) HA-1 (HMHA1), mRNAXM_590584PREDICTED: Bos taurus similar to minor histocompatibility antigen HA-1 (LOC512972), partial mRNA1e-30btcn51803 Bt.15736.1.S1_at
12403:21450_CL1Contig2-B:rNM_002695Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E, 25kDa (POLR2E), mRNANM_001038093Bos taurus polymerase (RNA) II (DNA directed) polypeptide E, 25kDa (POLR2E), mRNA4e-33CK833036, btcn51800, btcn51797, AW466076 Bt.4678.1.S1_at (941 bases away) Bt.4678.1.S1_at Bt.4678.1.S1_at Bt.4678.1.S1_at
12404:21000_CL1Contig2-B:fNM_001039847, NM_002085, NM_001039848Homo sapiens glutathione peroxidase 4 (phospholipid hydroperoxidase) (GPX4), transcript variant 1, mRNANM_174770Bos taurus glutathione peroxidase 4 (phospholipid hydroperoxidase) (GPX4), mRNA4e-33btcn51789, btcn51790, btcn51793, btcn51792, btcn51791 Bt.4205.1.S1_at Bt.4205.1.S1_at Bt.4205.1.S1_at Bt.4205.1.S1_at Bt.4205.1.S1_at
12405:11674_CL1Contig1-B:rNM_014963Homo sapiens KIAA0963 (KIAA0963), mRNAXM_590239PREDICTED: Bos taurus similar to KIAA0963 (LOC512682), mRNA4e-33btcn51795 Bt.10014.1.S1_at
12406:14880_CL1Contig1-B:rNM_012279Homo sapiens zinc finger protein 346 (ZNF346), mRNAXM_875660PREDICTED: Bos taurus similar to zinc finger protein 346, transcript variant 7 (LOC533548), mRNA4e-33btcn728, btcn727, btcn729, AW669460 Bt.13111.1.S1_at (26714 bases away) Bt.13111.1.S1_at (22847 bases away) Bt.13111.1.S1_at (26727 bases away) Bt.13111.1.S1_at (33181 bases away)
12407:43863_CL3Contig1-B:fNM_213647, NM_022963, NM_002011Homo sapiens fibroblast growth factor receptor 4 (FGFR4), transcript variant 1, mRNAXM_602166PREDICTED: Bos taurus fibroblast growth factor receptor 4 (FGFR4), mRNA4e-33btcn731, BM286412 Bt.24414.1.S1_at Bt.13111.1.S1_at
12408:40691_CL6Contig1-B:fXM_933051 (591 bases away)PREDICTED: Homo sapiens hypothetical protein LOC645679 (LOC645679), mRNAXM_865340PREDICTED: Bos taurus similar to nuclear receptor binding SET domain protein 1 isoform b, transcript variant 1 (LOC613929), mRNA4e-33btcn726 Bt.25724.1.A1_at
12409:8879_CL2Contig1-B:fNM_030645Homo sapiens SH3-binding domain protein 5-like (SH3BP5L), mRNAXM_598489PREDICTED: Bos taurus similar to SH3-binding domain protein 5-like (LOC520254), partial mRNA4e-33btcn32962 Bt.11005.1.S1_at (3785 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1240:5106_29229709-B:rNM_018158Homo sapiens solute carrier family 4 (anion exchanger), member 1, adaptor protein (SLC4A1AP), mRNAXM_869141PREDICTED: Bos taurus similar to solute carrier family 4 (anion exchanger), member 1, adaptor protein (LOC533732), mRNA4e-33btcn35604, CB440997 Bt.24885.1.A1_at (862 bases away) Bt.24885.1.A1_at (14213 bases away)
12410:45360_CL673Contig1-B:rNM_203295, NM_203296, NM_203297, NM_203294, NM_203293Homo sapiens tripartite motif-containing 7 (TRIM7), transcript variant 1, mRNAXM_589609PREDICTED: Bos taurus similar to Tripartite motif protein 7 (Glycogenin-interacting protein) (RING finger protein 90) (LOC539804), mRNA4e-33btcn17451 Bt.28150.2.S1_at, Bt.28150.1.S1_at
12411:45360_CL1428Contig1-B:fNM_033549, NM_201627Homo sapiens tripartite motif-containing 41 (TRIM41), transcript variant 1, mRNAXM_592809PREDICTED: Bos taurus similar to tripartite motif-containing 41 isform 1, transcript variant 1 (LOC540265), mRNA4e-33btcn17444, btcn17445 Bt.22355.1.S1_at Bt.22355.1.S1_at (939 bases away)
12412:10990_CL1Contig2-B:rXM_876343PREDICTED: Bos taurus similar to protein kinase C receptor, transcript variant 2 (LOC404068), mRNA4e-33
12414:1138_CL1Contig23-B:fNM_032765 (16222 bases away)Homo sapiens tripartite motif-containing 52 (TRIM52), mRNAXM_585880PREDICTED: Bos taurus similar to HLA class I histocompatibility antigen, A-11 alpha chain precursor (MHC class I antigen A*11) (LOC509006), mRNA1e-30btcn17443 Bt.9554.1.A1_at
12415:45360_CL1008Contig1-A:fNM_032765 (45013 bases away)Homo sapiens tripartite motif-containing 52 (TRIM52), mRNANM_001034545Bos taurus similar to interferon gamma inducible protein 47 (MGC126992), mRNA1e-30DY047483, btcn17437 Bt.9554.1.A1_at (21287 bases away) Bt.9554.1.A1_at (19925 bases away)
12416:3219_CL1Contig1-B:fNM_017712Homo sapiens pyroglutamyl-peptidase I (PGPEP1), mRNAXM_866409PREDICTED: Bos taurus similar to Pyroglutamyl-peptidase I (Pyrrolidone-carboxylate peptidase) (5-oxoprolyl-peptidase) (PGP-I), transcript variant 1 (LOC615089), mRNA4e-33DV909135, btcn818 Bt.27852.2.S1_at (303 bases away) Bt.27852.2.S1_at, Bt.27852.3.S1_at
12417:4494_CL1Contig1-A:rNM_032627 (15135 bases away)Homo sapiens single stranded DNA binding protein 4 (SSBP4), transcript variant 1, mRNANM_174688Bos taurus MAPA protein (MAPA), mRNA4e-33btcn821 Bt.11218.1.S1_at
12418:7658_CL1Contig3-B:rNM_032627, NM_001009998Homo sapiens single stranded DNA binding protein 4 (SSBP4), transcript variant 1, mRNANM_001035273Bos taurus single stranded DNA binding protein 4 (SSBP4), mRNA4e-33btcn769, btcn771, btcn772 Bt.5353.1.S1_a_at, Bt.5353.2.S1_a_at, Bt.17847.1.A1_at Bt.5353.1.S1_a_at, Bt.5353.2.S1_a_at, Bt.17847.1.A1_at Bt.5353.1.S1_a_at, Bt.5353.2.S1_a_at, Bt.17847.1.A1_at
12419:1317_CL2Contig1-B:fNM_012109Homo sapiens chromosome 19 open reading frame 4 (C19orf4), mRNAXM_583717PREDICTED: Bos taurus similar to Brain-specific membrane-anchored protein precursor, transcript variant 1 (LOC507157), mRNA4e-33btcn808, btcn807, AV592123, btcn806 Bt.7677.1.S1_at, Bt.7677.2.S1_at Bt.7677.1.S1_at, Bt.7677.2.S1_at Bt.7677.1.S1_at Bt.7677.2.S1_at
1241:11484_9598025-A:fNM_014860Homo sapiens suppressor of Ty 7 (S. cerevisiae)-like (SUPT7L), mRNAXM_585256PREDICTED: Bos taurus similar to STAGA complex 65 gamma subunit (STAF65gamma) (SPTF-associated factor 65 gamma) (Suppressor of Ty 7-like) (Adenocarcinoma antigen ART1) (LOC539152), mRNA1e-30btcn48243 Bt.13501.1.A1_at (429 bases away)
12420:6050_CL6Contig1-A:rNM_018316Homo sapiens kelch-like 26 (Drosophila) (KLHL26), mRNAXM_878945PREDICTED: Bos taurus similar to kelch repeat and BTB (POZ) domain containing 1, transcript variant 2 (LOC527458), mRNA4e-33btcn775 Bt.9505.1.A1_at
12421:15895_CL1Contig1-A:fNM_025021, NM_015321Homo sapiens CREB regulated transcription coactivator 1 (CRTC1), transcript variant 1, mRNAXM_879027PREDICTED: Bos taurus similar to Mucoepidermoid carcinoma translocated protein 1 (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1), transcript variant 3 (LOC510465), mRNA4e-33btcn797 Bt.20001.2.S1_at (2219 bases away)
12422:9237_CL3Contig1-B:rNM_002911Homo sapiens UPF1 regulator of nonsense transcripts homolog (yeast) (UPF1), mRNAXM_612154PREDICTED: Bos taurus similar to regulator of nonsense transcripts 1 (LOC532933), mRNA4e-33btcn774 Bt.21786.1.S1_at
12423:5674_CL1Contig1-B:rNM_021267, NM_001492Homo sapiens growth differentiation factor 1 (GDF1), mRNAXM_585368PREDICTED: Bos taurus similar to growth differentiation factor 1 (LOC508576), mRNA4e-33btcn812 Bt.16688.1.A1_at
12424:15121_CL1Contig3-B:fNM_199442, NM_007263, NM_199444Homo sapiens coatomer protein complex, subunit epsilon (COPE), transcript variant 1, mRNANM_176673Bos taurus coatomer protein complex, subunit epsilon (COPE), mRNA4e-33btcn779, btcn777, btcn776, btcn778 Bt.4141.1.S1_at Bt.4141.1.S1_at Bt.4141.1.S1_at Bt.4141.1.S1_at
12425:5414_CL3Contig1-B:fNM_019070Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 (DDX49), mRNAXM_879571PREDICTED: Bos taurus similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49, transcript variant 5 (LOC533809), mRNA4e-33btcn776, btcn781 Bt.4141.1.S1_at Bt.4141.1.S1_at (15623 bases away)
12426:667_CL1Contig2-B:rNM_004838Homo sapiens homer homolog 3 (Drosophila) (HOMER3), mRNAXM_584857PREDICTED: Bos taurus similar to Homer, neuronal immediate early gene, 3, transcript variant 1 (LOC508124), mRNA4e-33btcn776, AW465447, btcn780 Bt.4141.1.S1_at Bt.4141.1.S1_at (24105 bases away) Bt.4141.1.S1_at (23782 bases away)
12427:3945_CL1Contig3-B:rNM_014884, NM_001017392Homo sapiens splicing factor, arginine/serine-rich 14 (SFRS14), transcript variant 2, mRNAXM_879722PREDICTED: Bos taurus similar to splicing factor, arginine/serine-rich 14, transcript variant 3 (LOC516567), mRNA4e-33btcn800, btcn801, btcn802, btcn803, CB439796 Bt.2978.1.S1_at Bt.20362.1.S1_at, Bt.20362.2.S1_at Bt.20362.1.S1_at, Bt.20362.2.S1_at Bt.2978.1.S1_at, Bt.20362.1.S1_at, Bt.20362.2.S1_at Bt.20362.1.S1_at, Bt.20362.2.S1_at
12428:22777_CL1Contig1-B:fNM_033415Homo sapiens armadillo repeat containing 6 (ARMC6), mRNAXM_591911PREDICTED: Bos taurus similar to armadillo repeat containing 6, transcript variant 1 (LOC514111), mRNA4e-33btcn783 Bt.28667.2.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12429:2139_CL1Contig4-B:rNM_134440, NM_003721Homo sapiens regulatory factor X-associated ankyrin-containing protein (RFXANK), transcript variant 1, mRNAXM_880045PREDICTED: Bos taurus similar to regulatory factor X-associated ankyrin-containing protein isoform a, transcript variant 10 (LOC528238), mRNA4e-33AV592894, btcn755, btcn751, CO879632, btcn759, btcn750 Bt.5281.2.S1_a_at Bt.5281.2.S1_a_at Bt.5281.2.S1_a_at Bt.5281.2.S1_a_at Bt.5281.2.S1_a_at Bt.5281.2.S1_a_at
1242:13908_CL1Contig1-B:rNM_007266Homo sapiens XPA binding protein 1, GTPase (XAB1), mRNAXM_585310PREDICTED: Bos taurus similar to XPA binding protein 1, transcript variant 1 (LOC508522), mRNA4e-33btcn48242, AW465955, DV785077 Bt.13501.3.S1_at, Bt.13501.1.A1_at, Bt.13501.2.S1_at Bt.13501.3.S1_at, Bt.13501.2.S1_at Bt.13501.3.S1_at, Bt.13501.2.S1_at
12430:45360_CL444Contig1-B:rNM_004386Homo sapiens chondroitin sulfate proteoglycan 3 (neurocan) (CSPG3), mRNAXM_880290PREDICTED: Bos taurus similar to Neurocan core protein precursor (Chondroitin sulfate proteoglycan 3), transcript variant 5 (LOC523701), mRNA4e-33btcn823 Bt.5281.2.S1_a_at (12427 bases away)
12431:45360_CL770Contig1-B:fNM_004386Homo sapiens chondroitin sulfate proteoglycan 3 (neurocan) (CSPG3), mRNAXM_880290PREDICTED: Bos taurus similar to Neurocan core protein precursor (Chondroitin sulfate proteoglycan 3), transcript variant 5 (LOC523701), mRNA4e-33btcn764 Bt.12078.1.A1_at
12434:45360_61733840-B:fNM_001001524Homo sapiens transmembrane 6 superfamily member 2 (TM6SF2), mRNAXM_593991PREDICTED: Bos taurus similar to transmembrane 6 superfamily member 2 (LOC515889), partial mRNA4e-33CR853000, btcn787, btcn788, CN786272 Bt.27950.1.S1_at Bt.27950.1.S1_at (715 bases away) Bt.27950.1.S1_at Bt.27950.1.S1_at (1469 bases away)
12435:45360_18532696-A:fNM_015431Homo sapiens tripartite motif-containing 58 (TRIM58), mRNAXM_603937PREDICTED: Bos taurus similar to tripartite motif-containing 58 (LOC525584), mRNA4e-33BM482368 Bt.14006.2.S1_at (636832 bases away)
12437:2996_CL2Contig2-B:rNM_017797Homo sapiens BTB (POZ) domain containing 2 (BTBD2), mRNAXM_612839PREDICTED: Bos taurus similar to BTB (POZ) domain containing 2 (LOC533435), mRNA4e-33btcn7650, btcn7651, btcn7653, DV817763 Bt.7174.1.S1_at Bt.7174.1.S1_at Bt.7174.1.S1_at Bt.7174.1.S1_at (298 bases away)
12438:20913_CL2Contig1-A:rXM_939812, XM_926873, NM_001319Homo sapiens casein kinase 1, gamma 2 (CSNK1G2), mRNAXM_582453PREDICTED: Bos taurus similar to Casein kinase I, gamma 2 isoform (CKI-gamma 2) (LOC506060), mRNA4e-33CR456037, btcn7640 Bt.20041.1.S1_at Bt.20041.1.S1_at
12439:2519_CL3Contig1-B:fNM_001024566Bos taurus secretory carrier membrane protein 4 (SCAMP4), mRNA4e-33
1243:7393_8904787-A:fNM_007266 (1779 bases away)Homo sapiens XPA binding protein 1, GTPase (XAB1), mRNABE217471 Bt.13501.2.S1_at (13329 bases away)
12440:2044_CL1Contig1-B:fXM_927321, XM_934065, XM_932004, XM_933830, XM_942362, XM_934068, XM_929895, XM_931996, XM_932002, XM_086876, XM_039721, XM_933832, XM_931999, XM_932398, NM_031213, XM_926692, XM_937414, XM_933828, XM_929329, XM_934066, XM_934063, XM_933827Homo sapiens family with sequence similarity 108, member A1 (FAM108A1), mRNAXM_865591PREDICTED: Bos taurus similar to CG33096-PB, isoform B, transcript variant 1 (LOC614425), mRNA4e-33btcn13459, DV798843, btcn7646 Bt.6789.1.S1_at Bt.6789.1.S1_at Bt.6789.1.S1_at
12441:8083_CL1Contig1-B:fXM_926387PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC653185), mRNAXM_589487PREDICTED: Bos taurus similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC512048), mRNA4e-33BM106760.1, btcn7649.1
12442:11946_CL3Contig2-B:rNM_003200Homo sapiens transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3), mRNAXM_609091PREDICTED: Bos taurus similar to Transcription factor E2-alpha (Immunoglobulin enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Immunoglobulin transcription factor 1) (Transcription factor ITF-1) (Kappa-E2-binding factor), transcript variant 1 (LOC530616), mRNA4e-33btcn7638 Bt.3789.1.S1_at, Bt.8326.1.A1_at
12443:7449_CL1Contig1-A:fNM_003200 (6548 bases away)Homo sapiens transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3), mRNANM_174215Bos taurus ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR), mRNA4e-33btcn7631, btcn7630, DN521383 Bt.5040.1.S1_at Bt.5040.1.S1_at Bt.5040.1.S1_at
12444:8193_CL1Contig1-A:rNM_175873Homo sapiens ankyrin repeat domain 43 (ANKRD43), mRNAXM_585056PREDICTED: Bos taurus similar to ankyrin repeat domain 43 (LOC508297), mRNA4e-33btcn7647 Bt.28853.1.A1_at
12447:10967_45059309-A:fNM_133456Homo sapiens shroom family member 1 (SHROOM1), mRNAXM_867899PREDICTED: Bos taurus similar to apical protein 2 (LOC615958), mRNA3e-31CK832394 Bt.28853.1.A1_at (11361 bases away)
12448:14913_61760072-B:fNM_005260 (2037 bases away)Homo sapiens growth differentiation factor 9 (GDF9), mRNANM_174805Bos taurus low molecular mass ubiquinone-binding protein (9.5kD) (QP-C), mRNA4e-33btcn7634, L06665, btcn7636, btcn7637, DV796776, btcn7635, CR551003 Bt.547.1.S1_at Bt.547.1.S1_at Bt.547.1.S1_at Bt.547.1.S1_at Bt.547.1.S1_at Bt.547.1.S1_at Bt.547.1.S1_at
12449:39098_CL1Contig1-A:rNM_014423Homo sapiens AF4/FMR2 family, member 4 (AFF4), mRNADV777424, btcn7633, DV779839 Bt.10311.1.S1_at Bt.10311.1.S1_at Bt.10311.1.S1_at
1244:39384_CL6Contig1-B:fNM_032434Homo sapiens zinc finger protein 512 (ZNF512), mRNAXM_613439PREDICTED: Bos taurus similar to zinc finger protein 512, transcript variant 1 (LOC533884), mRNA4e-33btcn48238 Bt.13501.2.S1_at (19629 bases away)
12450:131_58063034-A:fNM_014423Homo sapiens AF4/FMR2 family, member 4 (AFF4), mRNAXM_615598PREDICTED: Bos taurus similar to ALL1 fused gene from 5q31 (LOC541306), partial mRNA4e-33btcn7655 Bt.10311.1.S1_at (4032 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12451:45360_49358752-A:rXM_596665PREDICTED: Bos taurus similar to olfactory receptor Olr1414 (LOC518474), partial mRNA4e-33
12453:45360_CL833Contig1-A:fNM_024836Homo sapiens zinc finger protein 672 (ZNF672), mRNAXM_584532PREDICTED: Bos taurus similar to zinc finger protein 672, transcript variant 1 (LOC539058), mRNA4e-33btcn24954 Bt.1231.3.S1_at, Bt.1231.3.S1_a_at, Bt.1231.1.S1_a_at, Bt.1231.2.S1_at
12454:45360_CL127Contig2-B:fNM_017865Homo sapiens zinc finger protein 692 (ZNF692), mRNANM_001024496Bos taurus zinc finger protein 692 (ZNF692), mRNA4e-33btcn24956, btcn24952, btcn24954, btcn24957 Bt.1231.3.S1_at, Bt.1231.3.S1_a_at, Bt.1231.1.S1_a_at Bt.1231.3.S1_at, Bt.1231.3.S1_a_at, Bt.1231.1.S1_a_at, Bt.1231.2.S1_at Bt.1231.3.S1_at, Bt.1231.3.S1_a_at, Bt.1231.1.S1_a_at, Bt.1231.2.S1_at Bt.1231.3.S1_at, Bt.1231.3.S1_a_at, Bt.1231.1.S1_a_at, Bt.1231.2.S1_at
12455:2233_CL1Contig1-B:rNM_003926Homo sapiens methyl-CpG binding domain protein 3 (MBD3), mRNAXM_868057PREDICTED: Bos taurus similar to methyl-CpG binding domain protein 3 (LOC616090), mRNA4e-33btcn1261 Bt.5866.1.S1_at
12456:23897_CL3Contig1-A:fNM_203304Homo sapiens ring finger and KH domain containing 1 (RKHD1), mRNAXM_583835PREDICTED: Bos taurus similar to RING finger and KH domain containing protein 1 (LOC538945), mRNA4e-33btcn1263 Bt.5866.1.S1_at (10933 bases away)
12457:33790_CL1Contig1-B:rXM_944426, XM_932164PREDICTED: Homo sapiens hypothetical protein LOC126520, transcript variant 2 (LOC126520), mRNAXM_589317PREDICTED: Bos taurus similar to Serine/threonine-protein kinase PLK3 (Polo-like kinase 3) (PLK-3) (Cytokine-inducible serine/threonine-protein kinase) (FGF-inducible kinase) (LOC511891), partial mRNA6e-29btcn1264 Bt.27732.1.A1_at
12458:30168_49624568-A:rNM_213604Homo sapiens ADAMTS-like 5 (ADAMTSL5), mRNACR456179
12459:45360_17995281-A:fNM_213604Homo sapiens ADAMTS-like 5 (ADAMTSL5), mRNAXM_868109PREDICTED: Bos taurus similar to thrombospondin, type I, domain containing 6 (LOC616145), mRNA4e-33btcn22487
1245:10593_CL1Contig3-B:f
12460:45360_CL498Contig1-B:fNM_017573Homo sapiens proprotein convertase subtilisin/kexin type 4 (PCSK4), mRNAXM_585571PREDICTED: Bos taurus similar to Proprotein convertase subtilisin/kexin type 4 precursor (PC4) (Neuroendocrine convertase 3) (NEC 3) (Prohormone convertase 3) (KEX2-like endoprotease 3) (LOC508744), mRNA4e-33btcn22474.1
12461:962_CL1Contig2-B:fNM_152482Homo sapiens chromosome 19 open reading frame 25 (C19orf25), mRNAXM_585828PREDICTED: Bos taurus hypothetical LOC508965 (LOC508965), mRNA4e-33btcn22464, btcn22466 Bt.27338.1.S1_at (798 bases away) Bt.27338.1.S1_at
12462:13061_CL2Contig1-B:fXM_593942PREDICTED: Bos taurus similar to neutrophil elastase (LOC515851), mRNA4e-33
12463:13061_CL1Contig1-B:fXM_868572PREDICTED: Bos taurus similar to proteinase 3 (LOC616534), mRNA4e-33
12464:15424_CL1Contig1-A:rNM_002622Homo sapiens prefoldin subunit 1 (PFDN1), mRNADT848774, DV793787, btcn55447, DV792828, CO879726 Bt.15789.1.S1_at, Bt.10278.1.S1_at Bt.15789.1.S1_at Bt.15789.1.S1_at Bt.15789.1.S1_at Bt.15789.1.S1_at, Bt.10278.1.S1_at
12465:22608_CL1Contig1-A:fNM_001007189Homo sapiens similar to bovine IgA regulatory protein (LOC492311), mRNAbtcn55458, CR852575, btcn55446 Bt.16860.1.A1_at, Bt.17200.1.A1_at, Bt.16634.1.A1_at, Bt.28053.1.S1_at, Bt.5560.1.S1_at Bt.16860.1.A1_at, Bt.17200.1.A1_at, Bt.16634.1.A1_at, Bt.28053.1.S1_at, Bt.5560.1.S1_at, Bt.10278.1.S1_at Bt.5560.1.S1_at
12466:6810_CL1Contig1-B:rNM_013981, NM_013982, NM_004883, NM_013983Homo sapiens neuregulin 2 (NRG2), transcript variant 1, mRNAbtcn55465 Bt.11920.1.A1_at (260 bases away)
12467:15171_CL1Contig1-A:fNM_016463Homo sapiens CXXC finger 5 (CXXC5), mRNANM_001038176Bos taurus CXXC finger 5 (CXXC5), mRNA4e-33btcn55463 Bt.20035.2.A1_at, Bt.8166.2.S1_at, Bt.24653.1.S1_at, Bt.8166.1.S1_at, Bt.8166.3.A1_s_at
12468:45360_CL64Contig3-B:fNM_003339, NM_181838Homo sapiens ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) (UBE2D2), transcript variant 1, mRNAXM_878133PREDICTED: Bos taurus similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2), transcript variant 2 (LOC541003), mRNA4e-33btcn55440, btcn55439, btcn55438 Bt.28417.1.S1_at, Bt.18911.1.A1_at Bt.28417.1.S1_at (147 bases away) Bt.28417.1.S1_at
1246:4724_CL1Contig1-B:rNM_007046Homo sapiens elastin microfibril interfacer 1 (EMILIN1), mRNAXM_594120PREDICTED: Bos taurus similar to EMILIN 1 precursor (Elastin microfibril interface-located protein 1) (Elastin microfibril interfacer 1) (LOC540451), mRNA4e-33btcn7287 Bt.4865.1.S1_at
12470:786_CL1Contig1-B:rNM_002154, NM_198431Homo sapiens heat shock 70kDa protein 4 (HSPA4), transcript variant 1, mRNAXM_878478PREDICTED: Bos taurus similar to heat shock 70kDa protein 4 isoform a, transcript variant 9 (LOC536558), mRNA1e-20btcn16659, btcn16661, btcn16660 Bt.22168.1.A1_at Bt.1908.1.S1_at, Bt.22168.1.A1_at Bt.22168.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12471:12938_CL1Contig1-A:fNM_001038545Bos taurus zinc finger, CCHC domain containing 10 (ZCCHC10), mRNA4e-33btcn16662.1 Bt.27876.1.A1_at
12472:17300_CL1Contig1-A:fNM_144723Homo sapiens zinc finger, matrin type 2 (ZMAT2), mRNAbtcn34320, DV795231 Bt.23553.1.S1_at, Bt.20406.1.S1_at Bt.23553.1.S1_at
12473:2873_46414360-A:fNM_012208Homo sapiens histidyl-tRNA synthetase-like (HARSL), mRNAXM_878743PREDICTED: Bos taurus similar to Histidyl-tRNA synthetase homolog (Histidine--tRNA ligase homolog) (HisRS), transcript variant 5 (LOC615182), mRNA4e-33btcn34318, btcn34317 Bt.28199.1.S1_at Bt.28199.1.S1_at
12474:2873_CL1Contig1-B:rNM_002109Homo sapiens histidyl-tRNA synthetase (HARS), mRNAXM_878803PREDICTED: Bos taurus similar to Histidyl-tRNA synthetase (Histidine--tRNA ligase) (HisRS), transcript variant 2 (LOC510937), mRNA4e-33btcn34302 Bt.7903.1.A1_at
12475:2022_CL2Contig1-B:fNM_017706Homo sapiens WD repeat domain 55 (WDR55), mRNANM_001014873Bos taurus WD repeat domain 55 (WDR55), mRNA4e-33btcn34311, btcn34314 Bt.5196.1.S1_at Bt.5196.1.S1_at
12476:2022_CL1Contig1-B:rNM_006083Homo sapiens IK cytokine, down-regulator of HLA II (IK), mRNAbtcn34297, CK977882, btcn34299, btcn34296 Bt.4443.1.S1_a_at (232 bases away) Bt.4443.1.S1_a_at Bt.4443.1.S1_a_at Bt.4443.1.S1_a_at
12477:7237_CL1Contig1-A:rNM_175815Bos taurus NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa (NDUFA2), mRNA4e-33
12478:21898_CL1Contig2-B:rNM_174008Bos taurus CD14 antigen (CD14), mRNA1e-30
12479:24326_15775892-A:fNM_080670 (8542 bases away)Homo sapiens solute carrier family 35, member A4 (SLC35A4), mRNAXM_882620PREDICTED: Bos taurus hypothetical protein LOC617206 (LOC617206), mRNA4e-33BI774915 Bt.935.1.A1_at (4482 bases away)
1247:15256_CL1Contig1-B:fNM_006488, NM_000221Homo sapiens ketohexokinase (fructokinase) (KHK), transcript variant a, mRNAXM_867407PREDICTED: Bos taurus similar to ketohexokinase, transcript variant 1 (LOC614868), mRNA4e-33CK835086, btcn7280, btcn7279, CB425960, btcn7282, btcn7276, CR552901 Bt.15914.2.S1_at Bt.18337.1.A1_at, Bt.15914.1.A1_at, Bt.15914.2.S1_at, Bt.29396.1.A1_at Bt.18337.1.A1_at, Bt.15914.1.A1_at, Bt.15914.2.S1_at, Bt.29396.1.A1_at Bt.15914.1.A1_at, Bt.15914.2.S1_at Bt.18337.1.A1_at, Bt.15914.1.A1_at, Bt.22210.1.S1_at, Bt.15914.2.S1_at, Bt.29396.1.A1_at Bt.15914.1.A1_at, Bt.15914.2.S1_at Bt.18337.1.A1_at, Bt.15914.1.A1_at, Bt.15914.2.S1_at, Bt.29396.1.A1_at
12480:24326_7425261-A:fNM_080670 (2372 bases away)Homo sapiens solute carrier family 35, member A4 (SLC35A4), mRNAXM_586621PREDICTED: Bos taurus hypothetical LOC509618 (LOC509618), mRNA1e-30BI774915 (2033 bases away)
12481:15053_CL1Contig1-A:rNM_080670Homo sapiens solute carrier family 35, member A4 (SLC35A4), mRNAXM_586620PREDICTED: Bos taurus similar to solute carrier family 35, member A4 (LOC539354), mRNA4e-33btcn34319 Bt.935.1.A1_at, Bt.935.2.S1_at
12482:29222_CL1Contig1-A:fNM_080670Homo sapiens solute carrier family 35, member A4 (SLC35A4), mRNAXM_869447PREDICTED: Bos taurus hypothetical protein LOC617228 (LOC617228), mRNA4e-33CR553635, btcn34319 Bt.935.2.S1_at (840 bases away) Bt.935.1.A1_at, Bt.935.2.S1_at
12483:18419_CL1Contig2-B:rXM_925998, XM_939428, NM_001035235PREDICTED: Homo sapiens steroid receptor RNA activator 1 (SRA1), mRNAbtcn34304, btcn34309 Bt.1697.1.S1_at Bt.1697.3.S1_a_at, Bt.1697.1.S1_at, Bt.1697.2.S1_at
12484:10584_CL1Contig4-B:rNM_017747, NM_020690Homo sapiens ankyrin repeat and KH domain containing 1 (ANKHD1), transcript variant 1, mRNAXM_586460PREDICTED: Bos taurus similar to MASK-4E-BP3 protein (LOC509490), mRNA4e-33btcn34307, CB462218, btcn34306 Bt.21059.1.S1_at, Bt.21059.3.S1_a_at Bt.21059.3.S1_a_at Bt.21059.3.S1_a_at
12485:26079_CL1Contig1-A:rXM_601210PREDICTED: Bos taurus similar to heparin-binding EGF-like growth factor (LOC522921), mRNA4e-33
12486:31404_CL1Contig1-B:rNR_001578 (665 bases away)Homo sapiens L-threonine dehydrogenase (TDH) on chromosome 8XM_589386PREDICTED: Bos taurus similar to L-threonine dehydrogenase (LOC511957), mRNA4e-33btcn13513, BC112535 Bt.22599.1.A1_at Bt.22599.1.A1_at
12487:45360_61940656-A:fNM_171982Homo sapiens tripartite motif-containing 35 (TRIM35), transcript variant 2, mRNAXM_596498PREDICTED: Bos taurus similar to tripartite motif-containing 35 isoform 1 (LOC518310), mRNA4e-33DN637871 Bt.29934.2.S1_a_at (1422 bases away)
12488:1048_CL3Contig2-B:rNM_030795Homo sapiens stathmin-like 4 (STMN4), mRNAXM_590302PREDICTED: Bos taurus similar to stathmin-like-protein RB3 (LOC512732), partial mRNA4e-33btcn9780, btcn9781, btcn9779 Bt.2349.1.S1_at Bt.2349.1.S1_at Bt.2349.1.S1_at
12489:23169_CL1Contig1-B:fNM_004323Homo sapiens BCL2-associated athanogene (BAG1), mRNAXM_874500PREDICTED: Bos taurus similar to BAG-family molecular chaperone regulator-1 (BCL-2 binding athanogene-1) (BAG-1) (Glucocorticoid receptor-associated protein RAP46), transcript variant 3 (LOC613855), mRNA2e-23DV789153, btcn40696, btcn40697, CB535955 Bt.5103.1.S1_at Bt.5103.1.S1_at, Bt.29576.1.A1_at Bt.5103.1.S1_at Bt.5103.1.S1_at, Bt.29576.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1248:4075_CL1Contig2-B:fNM_147233, NM_147223, NM_003743Homo sapiens nuclear receptor coactivator 1 (NCOA1), transcript variant 1, mRNAXM_880297PREDICTED: Bos taurus similar to nuclear receptor coactivator 1 isoform 1, transcript variant 5 (LOC525346), mRNA4e-33btcn52032, btcn52034, DN536304, btcn52045, btcn52047 Bt.27939.2.A1_a_at Bt.27939.2.A1_a_at Bt.27939.2.A1_a_at Bt.13313.2.S1_at, Bt.21119.1.A1_at, Bt.13313.1.S1_at, Bt.27939.2.A1_a_at Bt.27939.2.A1_a_at
12490:2796_CL1Contig1-B:fNM_016410Homo sapiens chromatin modifying protein 5 (CHMP5), mRNANM_001034682Bos taurus similar to chromatin modifying protein 5 (MGC128530), mRNA4e-33btcn40695 Bt.14081.1.A1_at, Bt.14081.2.S1_at
12492:4098_CL1Contig1-B:fNM_002504Homo sapiens nuclear transcription factor, X-box binding 1 (NFX1), transcript variant 1, mRNAXM_593745PREDICTED: Bos taurus similar to nuclear transcription factor, X-box binding 1 isoform 1, transcript variant 1 (LOC515680), mRNA4e-33btcn40701 Bt.9993.1.S1_at (13029 bases away)
12493:255_CL1Contig1-B:fXR_001444 (403 bases away)PREDICTED: Homo sapiens aquaporin 7 pseudogene 1, transcript variant 3 (AQP7P1), misc RNAXM_867324PREDICTED: Bos taurus similar to aquaporin 7 (LOC615498), mRNA4e-33CN794412, btcn40703, DV847161, DV846016, btcn30784 Bt.9993.1.S1_at (818 bases away) Bt.9993.1.S1_at Bt.9993.1.S1_at (109 bases away) Bt.9993.1.S1_at (116 bases away) Bt.9993.1.S1_at (108 bases away)
12494:16362_15961154-A:fNM_018306Homo sapiens transmembrane protein 40 (TMEM40), mRNAXM_581782PREDICTED: Bos taurus similar to transmembrane protein 40 (LOC505490), mRNA4e-33btcn46278 Bt.26528.1.S1_at
12495:17502_CL2Contig1-B:fXM_940859, XM_371617, NM_012298Homo sapiens cullin-associated and neddylation-dissociated 2 (putative) (CAND2), mRNAXM_613356PREDICTED: Bos taurus similar to Cullin-associated NEDD8-dissociated protein 2 (Cullin-associated and neddylation-dissociated protein 2) (p120 CAND2) (TBP-interacting protein TIP120B) (TBP-interacting protein of 120 kDa B) (LOC533826), mRNA4e-33btcn31007, btcn46224, btcn46221, btcn46219 Bt.21534.3.S1_a_at, Bt.4783.1.S1_at, Bt.21534.2.A1_at Bt.21534.3.S1_a_at, Bt.21534.2.A1_at Bt.21534.3.S1_a_at, Bt.4783.1.S1_at, Bt.21534.2.A1_at Bt.21534.3.S1_a_at, Bt.4783.1.S1_at, Bt.21534.2.A1_at
12496:3400_CL1Contig2-B:fXM_929064 (257 bases away)PREDICTED: Homo sapiens similar to 60S ribosomal protein L32 (LOC646104), mRNAXM_613356PREDICTED: Bos taurus similar to Cullin-associated NEDD8-dissociated protein 2 (Cullin-associated and neddylation-dissociated protein 2) (p120 CAND2) (TBP-interacting protein TIP120B) (TBP-interacting protein of 120 kDa B) (LOC533826), mRNA4e-33btcn31007, btcn46221, btcn46219, btcn46227 Bt.21534.3.S1_a_at, Bt.4783.1.S1_at, Bt.21534.2.A1_at Bt.21534.3.S1_a_at, Bt.4783.1.S1_at, Bt.21534.2.A1_at Bt.21534.3.S1_a_at, Bt.4783.1.S1_at, Bt.21534.2.A1_at Bt.4783.1.S1_at, Bt.21534.2.A1_at
12497:15352_7423680-A:fNM_207307Homo sapiens chromosome 3 open reading frame 25 (C3orf25), mRNAXM_592899PREDICTED: Bos taurus hypothetical LOC514973 (LOC514973), mRNA1e-11btcn46274 Bt.4783.1.S1_at (2263 bases away)
12498:38982_CL1Contig1-B:rNM_003925Homo sapiens methyl-CpG binding domain protein 4 (MBD4), mRNANM_001034405Bos taurus methyl-CpG binding domain protein 4 (MBD4), mRNA4e-33btcn46230 Bt.4783.1.S1_at (27418 bases away)
12499:19579_6843876-A:fNM_052990 (486 bases away)Homo sapiens intraflagellar transport 122 homolog (Chlamydomonas) (IFT122), transcript variant 4, mRNAXM_875299PREDICTED: Bos taurus similar to WD repeat domain 10, transcript variant 5 (LOC536731), mRNA1e-30btcn46263 Bt.8829.1.S1_a_at, Bt.8829.1.S1_at
1249:7477_CL1Contig2-A:rNM_001035256, NM_000939Homo sapiens proopiomelanocortin (adrenocorticotropin/ beta-lipotropin/ alpha-melanocyte stimulating hormone/ beta-melanocyte stimulating hormone/ beta-endorphin) (POMC), transcript variant 2, mRNANM_174151Bos taurus proopiomelanocortin (POMC), mRNA4e-33btcn52094, btcn52093, btcn52092 Bt.4713.1.S1_at Bt.4713.1.S1_at Bt.4713.1.S1_at
124:10704_16999718-A:fNM_002808 (7776 bases away)Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 (PSMD2), mRNABM089090 Bt.20443.1.S1_at (7271 bases away)
12500:6530_163444-A:fNM_000539Homo sapiens rhodopsin (opsin 2, rod pigment) (retinitis pigmentosa 4, autosomal dominant) (RHO), mRNANM_001014890Bos taurus rhodopsin (RHO), mRNA4e-33M21606 Bt.12753.1.S1_at, Bt.12753.1.A1_at
12501:29790_CL4Contig1-B:rNM_015008, NM_001017395Homo sapiens transmembrane and coiled-coil domain family 1 (TMCC1), transcript variant 2, mRNAXM_587626PREDICTED: Bos taurus similar to transmembrane and coiled-coil domains 1 isoform b (LOC510486), mRNA4e-33btcn46264, DV796608 Bt.12209.1.S1_at (1231 bases away) Bt.12209.1.S1_at (2686 bases away)
12502:5538_CL1Contig1-B:fXM_595965PREDICTED: Bos taurus similar to Ubiquitin-associated protein 1, transcript variant 1 (LOC517788), mRNA4e-33
12503:12945_CL1Contig1-A:fXM_591066PREDICTED: Bos taurus similar to kinesin family member 24 isoform 1, transcript variant 1 (LOC513392), mRNA1e-30
12504:5913_CL1Contig2-A:fNM_147172, NM_147173, NM_001161Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 2 (NUDT2), transcript variant 1, mRNAbtcn46231, btcn46232, btcn46233 Bt.2818.2.S1_a_at, Bt.24403.1.A1_a_at Bt.2818.2.S1_a_at Bt.2818.2.S1_a_at
12505:1306_CL1Contig1-A:rNM_020702Homo sapiens KIAA1161 (KIAA1161), mRNAXM_607425PREDICTED: Bos taurus similar to CG11909-PA (LOC528987), mRNA4e-33btcn46231 Bt.2818.2.S1_a_at, Bt.24403.1.A1_a_at
12506:14270_61768037-A:fNM_147202Homo sapiens chromosome 9 open reading frame 25 (C9orf25), mRNAXM_875809PREDICTED: Bos taurus similar to Protein C9orf25 homolog, transcript variant 3 (LOC614125), mRNA4e-33CR853249 Bt.20436.1.S1_at (2235 bases away)
12507:26586_CL1Contig1-A:f

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12508:11541_CL1Contig1-B:fNM_147164, NM_001842Homo sapiens ciliary neurotrophic factor receptor (CNTFR), transcript variant 2, mRNAXM_588028PREDICTED: Bos taurus similar to Ciliary neurotrophic factor receptor alpha precursor (CNTFR alpha), transcript variant 1 (LOC539548), mRNA4e-33btcn46256 Bt.10004.1.A1_at
12509:6585_CL1Contig1-A:fNM_148179, NM_148178Homo sapiens chromosome 9 open reading frame 23 (C9orf23), transcript variant 1, mRNAXM_589663PREDICTED: Bos taurus similar to ribonuclease P (predicted) (LOC512203), mRNA4e-33btcn46257 Bt.20332.1.S1_at
1250:29019_CL1Contig1-B:rNM_175629, NM_153759, NM_022552Homo sapiens DNA (cytosine-5-)-methyltransferase 3 alpha (DNMT3A), transcript variant 3, mRNAXM_880641PREDICTED: Bos taurus DNA (cytosine-5-)-methyltransferase 3 alpha, transcript variant 3 (DNMT3A), mRNA4e-33btcn52072 Bt.22981.1.S1_at, Bt.22981.2.A1_at, Bt.22981.2.S1_a_at
12510:7602_CL1Contig4-A:rNM_024348, NM_007234Homo sapiens dynactin 3 (p22) (DCTN3), transcript variant 1, mRNAXM_592161PREDICTED: Bos taurus similar to dynactin 3 isoform 1, transcript variant 1 (LOC514327), mRNA4e-33btcn46241, AM026260, btcn46235, btcn46237, btcn46239, btcn46242 Bt.12392.1.S1_at Bt.12392.1.S1_at Bt.12392.1.S1_at Bt.12392.1.S1_at Bt.12392.1.S1_at Bt.12392.1.S1_at
12511:10612_CL1Contig1-B:rNM_005866, NM_147157, NM_147158Homo sapiens opioid receptor, sigma 1 (OPRS1), transcript variant 1, mRNANM_001034655Bos taurus opioid receptor, sigma 1 isoform 1 (OPRS1), mRNA4e-33btcn46229, DN535599 Bt.714.1.S1_at Bt.714.1.S1_at (69 bases away)
12512:32400_9749233-B:fNM_000155Homo sapiens galactose-1-phosphate uridylyltransferase (GALT), mRNANM_001035041Bos taurus galactose-1-phosphate uridylyltransferase (GALT), mRNA6e-26btcn46248, DV911353, btcn46249, btcn46245, btcn46250, btcn46247, btcn46246 Bt.21464.2.S1_a_at Bt.21464.3.S1_a_at, Bt.21464.2.S1_a_at Bt.21464.3.S1_a_at, Bt.21464.2.S1_a_at Bt.21464.3.S1_a_at, Bt.21464.2.S1_a_at, Bt.21464.1.S1_at Bt.21464.3.S1_a_at, Bt.21464.2.S1_a_at Bt.21464.3.S1_a_at, Bt.21464.2.S1_a_at, Bt.21464.1.S1_at Bt.21464.3.S1_a_at, Bt.21464.2.S1_a_at
12513:17348_CL1Contig1-B:fNM_004512, NM_147162Homo sapiens interleukin 11 receptor, alpha (IL11RA), transcript variant 1, mRNANM_001034339Bos taurus interleukin 11 receptor, alpha (IL11RA), mRNA4e-33btcn46244 Bt.25157.1.A1_at (137 bases away)
12514:11164_42583162-A:rNM_006664Homo sapiens chemokine (C-C motif) ligand 27 (CCL27), mRNAXM_585789PREDICTED: Bos taurus similar to chemokine (C-C motif) ligand 27 (LOC508933), mRNA4e-33CK729648 Bt.25157.1.A1_at
12515:11164_CL1Contig2-B:rNM_006664 (2998 bases away)Homo sapiens chemokine (C-C motif) ligand 27 (CCL27), mRNAXM_585790PREDICTED: Bos taurus hypothetical LOC508934 (LOC508934), mRNA4e-33btcn46273 Bt.25157.1.A1_at (2096 bases away)
12516:7075_CL1Contig1-B:fNM_006274Homo sapiens chemokine (C-C motif) ligand 19 (CCL19), mRNANM_001034345Bos taurus similar to Small inducible cytokine A19 precursor (CCL19) (Epstein-Barr virus induced molecule 1 ligand chemokine) (EBI1-ligand chemokine) (ELC) (MGC128734), mRNA4e-33btcn46253, BE755116, btcn46252 Bt.26655.1.S1_at Bt.26655.1.S1_at Bt.26655.1.S1_at
12517:41643_17892664-B:fNM_174938Homo sapiens FERM domain containing 3 (FRMD3), mRNAXM_612695PREDICTED: Bos taurus similar to FERM domain containing 3 (LOC533321), mRNA4e-33btcn20563, DV884379 Bt.17702.1.A1_at, Bt.26688.2.S1_a_at Bt.26688.2.S1_a_at
12518:44670_CL1Contig1-A:rNM_015239Homo sapiens ATP/GTP binding protein 1 (AGTPBP1), mRNAXM_614905PREDICTED: Bos taurus similar to ATP/GTP binding protein 1 (LOC534958), mRNA3e-31btcn53376 Bt.27194.1.S1_at
1251:5278_CL1Contig2-B:fNM_183360, NM_033147, NM_183361, NM_021907, NM_033148Homo sapiens dystrobrevin, beta (DTNB), transcript variant 1, mRNAXM_880759PREDICTED: Bos taurus similar to dystrobrevin, beta isoform 1, transcript variant 5 (LOC534119), mRNA4e-33btcn52057, btcn52053, btcn52050, btcn52054, btcn52051, DN521623 Bt.6123.1.S1_at, Bt.7860.2.S1_a_at, Bt.7860.1.S1_s_at Bt.6123.1.S1_at, Bt.7860.1.S1_s_at Bt.6123.1.S1_at, Bt.7860.1.S1_s_at Bt.18955.1.S1_at, Bt.6123.1.S1_at, Bt.18955.2.A1_at, Bt.7860.2.S1_a_at, Bt.7860.1.S1_s_at Bt.18955.1.S1_at, Bt.6123.1.S1_at, Bt.18955.2.A1_at, Bt.7860.2.S1_a_at, Bt.7860.1.S1_s_at Bt.7860.1.S1_s_at
12521:14948_CL1Contig1-B:fNM_177937 (11182 bases away)Homo sapiens golgi phosphoprotein 2 (GOLPH2), transcript variant 2, mRNAXM_868391PREDICTED: Bos taurus similar to corneal wound healing-related protein (LOC506175), mRNA4e-33AM025556.1, btcn53367, btcn53365 Bt.23674.1.S1_at Bt.23674.1.S1_at Bt.23674.1.S1_at
12522:18_58064081-A:fNM_177937, NM_016548Homo sapiens golgi phosphoprotein 2 (GOLPH2), transcript variant 1, mRNAXM_595216PREDICTED: Bos taurus similar to golgi phosphoprotein 2 (LOC517052), mRNA6e-29btcn53371 Bt.5523.1.S1_at (1422 bases away)
12524:34974_9701436-A:fNM_006180, NM_001018064Homo sapiens neurotrophic tyrosine kinase, receptor, type 2 (NTRK2), transcript variant a, mRNAXM_613173PREDICTED: Bos taurus similar to neurotrophic tyrosine kinase, receptor, type 2 isoform a precursor (LOC533691), mRNA4e-33AV590443 Bt.12217.3.A1_at (149469 bases away)
12525:35325_CL1Contig1-B:rNM_001244Homo sapiens tumor necrosis factor (ligand) superfamily, member 8 (TNFSF8), mRNANM_001025207Bos taurus tumor necrosis factor receptor superfamily, member 8 (TNFRSF8), mRNA2e-13btcn21506, btcn21509 Bt.26752.1.A1_at Bt.26752.1.A1_at (12374 bases away)
12526:9136_CL1Contig1-A:rXM_936557 (11120 bases away)PREDICTED: Homo sapiens hypothetical protein LOC647494 (LOC647494), mRNABM364187, btcn21504, DT849576, btcn21503 Bt.28272.1.S1_at (44809 bases away) Bt.28272.1.S1_at (44805 bases away) Bt.28272.1.S1_at (42786 bases away) Bt.28272.1.S1_at (42825 bases away)
12527:5132_CL1Contig1-A:rNM_153045Homo sapiens chromosome 9 open reading frame 91 (C9orf91), mRNANM_001024561Bos taurus DKFZp547P234 protein (C9orf91), mRNA4e-33DT809292, BF044260.1, btcn21499 Bt.28272.1.S1_at (23024 bases away) Bt.28272.1.S1_at (5805 bases away) Bt.1990.1.S1_at, Bt.28272.1.S1_at
12529:45360_CL739Contig1-A:rNM_004888 (2598 bases away)Homo sapiens ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 (ATP6V1G1), mRNAbtcn21501, btcn21499 Bt.28272.1.S1_at Bt.1990.1.S1_at, Bt.28272.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
1252:3313_CL1Contig1-A:rNM_018263Homo sapiens additional sex combs like 2 (Drosophila) (ASXL2), mRNAbtcn52080 Bt.18455.1.A1_at, Bt.26137.1.A1_at
12530:825_CL3Contig1-B:fNM_004888Homo sapiens ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 (ATP6V1G1), mRNANM_174245Bos taurus ATPase, H+ transporting, lysosomal (vacuolar proton pump), member J (ATP6J), mRNA4e-33btcn21498, DV793936, btcn21499 Bt.1990.1.S1_at Bt.1990.1.S1_at Bt.1990.1.S1_at, Bt.28272.1.S1_at
12531:6623_CL2Contig1-B:fNM_005118Homo sapiens tumor necrosis factor (ligand) superfamily, member 15 (TNFSF15), mRNAXM_592054PREDICTED: Bos taurus similar to tumor necrosis factor (ligand) superfamily, member 15, transcript variant 1 (LOC514239), mRNA4e-33btcn21510 Bt.26752.1.A1_at (112088 bases away)
12532:7936_CL22Contig1-B:fNM_000860Homo sapiens hydroxyprostaglandin dehydrogenase 15-(NAD) (HPGD), mRNANM_001034419Bos taurus hydroxyprostaglandin dehydrogenase 15-(NAD) (PGDH), mRNA4e-33btcn7219, btcn48741, CB467712 Bt.2556.1.S1_at, Bt.22672.1.A1_at Bt.2556.1.S1_at Bt.2556.1.S1_at
12535:20746_CL1Contig1-B:fNM_000136Homo sapiens Fanconi anemia, complementation group C (FANCC), mRNANM_174316Bos taurus Fanconi anemia, complementation group C (FANCC), mRNA4e-33btcn31790, CB440819, btcn39494 Bt.4648.1.S1_at Bt.4648.1.S1_at (816 bases away) Bt.4648.1.S1_at (41242 bases away)
12536:12685_CL1Contig3-B:rNR_001278 (30243 bases away)Homo sapiens cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1 (CYP2B7P1) on chromosome 19XM_582133PREDICTED: Bos taurus similar to aminopeptidase O (LOC505788), mRNA4e-33btcn20331, DV926498.1, btcn31786, btcn31789.1, CK833344, CN789337, btcn31787.1, btcn31785.1 Bt.17242.1.A1_at (46341 bases away) Bt.17242.1.A1_at (46485 bases away) Bt.17242.1.A1_at (46374 bases away) Bt.17242.1.A1_at (46358 bases away) Bt.17242.1.A1_at (46366 bases away) Bt.17242.1.A1_at (46341 bases away) Bt.17242.1.A1_at (46589 bases away) Bt.17242.1.A1_at (46452 bases away)
12537:45360_9842135-B:fXM_499136PREDICTED: Homo sapiens similar to zinc finger protein 658 (LOC652441), mRNAbtcn6840.1 (10498 bases away)
12538:10783_CL1Contig1-B:fNM_153698Homo sapiens chromosome 9 open reading frame 21 (C9orf21), mRNAXM_869031PREDICTED: Bos taurus similar to UPF0308 protein C9orf21 (LOC616897), mRNA4e-33btcn6839, btcn6840, DV932989 Bt.11073.1.S1_at Bt.11073.1.S1_at Bt.11073.1.S1_at
12539:19643_CL1Contig1-B:fXM_937129, XM_930629, NM_033331, XM_498195, NM_003671Homo sapiens CDC14 cell division cycle 14 homolog B (S. cerevisiae) (CDC14B), transcript variant 1, mRNAXM_877619PREDICTED: Bos taurus similar to CDC14 homolog B isoform 2, transcript variant 6 (LOC520428), mRNA1e-30btcn6834, btcn6835 Bt.6842.1.S1_at (2967 bases away) Bt.6842.1.S1_at (2489 bases away)
12540:2593_CL1Contig1-B:rNM_014282Homo sapiens hyaluronan binding protein 4 (HABP4), mRNAXM_592712PREDICTED: Bos taurus similar to hyaluronan binding protein 4, transcript variant 1 (LOC514807), mRNA4e-33btcn6842 Bt.20020.2.S1_at, Bt.20020.1.S1_at
12541:1657_CL2Contig1-A:fNM_153695Homo sapiens zinc finger protein 367 (ZNF367), mRNAXM_613307PREDICTED: Bos taurus similar to zinc finger protein 367, transcript variant 1 (LOC540823), mRNA4e-33btcn6846 Bt.20020.2.S1_at (73563 bases away)
12542:4395_CL1Contig1-B:fNM_007001Homo sapiens solute carrier family 35, member D2 (SLC35D2), mRNAXM_583021PREDICTED: Bos taurus similar to solute carrier family 35, member D2 (LOC506559), mRNA4e-33DY122458, btcn6856, DN280961 Bt.28522.1.S1_at (20301 bases away) Bt.28522.1.S1_at (97 bases away) Bt.28522.1.S1_at
12543:4872_10282745-A:fXM_869108PREDICTED: Bos taurus similar to bicaudal D homolog 2 isoform 1 (LOC616958), partial mRNA4e-30
12545:34974_CL11Contig1-B:fNM_004560Homo sapiens receptor tyrosine kinase-like orphan receptor 2 (ROR2), mRNAbtcn15916 Bt.3546.1.S1_at
12546:18704_7057456-A:fNM_005384Homo sapiens nuclear factor, interleukin 3 regulated (NFIL3), mRNAXM_582492PREDICTED: Bos taurus similar to nuclear factor, interleukin 3 regulated (LOC506097), mRNA4e-33btcn15911 Bt.27854.2.S1_at, Bt.27854.1.S1_at
12547:32175_16745324-B:fNM_017594 (198848 bases away)Homo sapiens DIRAS family, GTP-binding RAS-like 2 (DIRAS2), mRNAXM_877959PREDICTED: Bos taurus similar to Methylglutaconyl-CoA hydratase, mitochondrial precursor (AU-specific RNA-binding enoyl-CoA hydratase) (AU-binding protein/enoyl-CoA hydratase), transcript variant 2 (LOC614716), mRNA4e-33DV775596.1, BM434264.1, btcn15912 Bt.14059.1.A1_at Bt.14059.1.A1_at Bt.14059.1.A1_at
12548:4429_CL6Contig2-B:rNM_014057, XM_927634, NM_024416, XM_937185, NM_033014, NM_001012267Homo sapiens osteoglycin (osteoinductive factor, mimecan) (OGN), transcript variant 3, mRNANM_173946Bos taurus osteoglycin (osteoinductive factor, mimecan) (OGN), mRNA4e-33btcn55387, btcn55401, btcn17297, DN282766, DV821494, btcn55386, DV802449 Bt.5341.1.S1_at Bt.22314.2.S1_at, Bt.22314.1.S1_at, Bt.5341.1.S1_at, Bt.17080.1.A1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at, Bt.23575.1.A1_at Bt.22314.2.S1_at, Bt.22314.1.S1_at, Bt.5341.1.S1_at, Bt.17080.1.A1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at, Bt.23575.1.A1_at Bt.114.1.S1_at (4031 bases away) Bt.5341.1.S1_at, Bt.114.1.S1_at, Bt.24211.2.S1_at, Bt.24211.1.A1_at Bt.114.1.S1_at (3960 bases away) Bt.114.1.S1_at (2842 bases away)
12549:27526_CL1Contig1-B:rXM_587065PREDICTED: Bos taurus hypothetical LOC509988 (LOC509988), mRNA4e-33
1254:7175_17036648-A:fNM_002254Homo sapiens kinesin family member 3C (KIF3C), mRNAbtcn52084, CB418491.1 Bt.25524.1.S1_at Bt.10215.1.A1_at, Bt.25524.1.S1_at
12550:8889_CL1Contig1-B:rNM_017948Homo sapiens nucleolar protein 8 (NOL8), mRNAbtcn55389 Bt.8195.1.S1_at, Bt.25395.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12551:11917_CL1Contig1-A:fNM_013417, NM_002161Homo sapiens isoleucine-tRNA synthetase (IARS), transcript variant short, mRNAXM_878515PREDICTED: Bos taurus similar to Isoleucyl-tRNA synthetase, cytoplasmic (Isoleucine--tRNA ligase) (IleRS) (IRS), transcript variant 9 (LOC509885), mRNA4e-33btcn55391, btcn55392 Bt.3447.1.S1_at Bt.3447.1.S1_at
12553:45360_CL609Contig1-A:rNM_031486Homo sapiens zinc finger protein 484 (ZNF484), transcript variant 1, mRNAXM_580638PREDICTED: Bos taurus similar to zinc finger protein 484 isoform a (LOC538489), mRNA4e-33CR553362, btcn55400 Bt.29561.1.A1_at (14609 bases away) Bt.29561.1.A1_at (14248 bases away)
12554:2503_CL1Contig2-B:rNM_001333Homo sapiens cathepsin L2 (CTSL2), mRNANM_174032Bos taurus cathepsin L (CTSL), mRNA4e-33CK834034, DV784574, DV781289, DV789520, btcn55397, DV788780, btcn55395, DV921451, btcn55396, btcn55394 Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at Bt.3987.1.S1_at
12555:584_CL10Contig1-B:fNM_003177Homo sapiens spleen tyrosine kinase (SYK), mRNANM_001037465Bos taurus spleen tyrosine kinase (SYK), mRNA4e-33btcn23787, DY138905 Bt.9468.1.S1_at Bt.9468.1.S1_at
12556:14253_7047560-B:fNM_005392, NM_024517Homo sapiens PHD finger protein 2 (PHF2), transcript variant 1, mRNAXM_617909PREDICTED: Bos taurus similar to PHD finger protein 2 (LOC537728), mRNA4e-33btcn13097 Bt.27327.1.A1_at, Bt.4466.2.S1_at, Bt.4466.1.A1_at
12557:8652_49411503-A:rNM_005797 (18436 bases away)Homo sapiens epithelial V-like antigen 1 (EVA1), transcript variant 1, mRNAbtcn13098, btcn13099.1, AJ678918 Bt.7111.1.S1_at (6608 bases away) Bt.20596.1.S1_at (1927 bases away) Bt.7111.1.S1_at (9204 bases away)
12559:32199_CL21Contig1-A:fNM_017594Homo sapiens DIRAS family, GTP-binding RAS-like 2 (DIRAS2), mRNAXM_581896PREDICTED: Bos taurus similar to GTP-binding protein Di-Ras2 (Distinct subgroup of the Ras family member 2) (LOC538667), mRNA4e-33btcn38123 Bt.14059.1.A1_at (198791 bases away)
1255:14773_CL4Contig1-B:fNM_016131Homo sapiens RAB10, member RAS oncogene family (RAB10), mRNABM364088, DV796837, btcn52071, DV779335, CN441425 Bt.10215.1.A1_at Bt.10215.1.A1_at Bt.7004.1.S1_at, Bt.10215.1.A1_at Bt.10215.1.A1_at Bt.10215.1.A1_at
12560:20357_CL1Contig1-B:fXM_613542PREDICTED: Bos taurus similar to related to CPSF subunits 74 kDa (LOC533964), partial mRNA4e-33
12561:30427_42729900-A:r
12563:1380_CL1Contig2-A:rNM_019008 (89877 bases away)Homo sapiens Smith-Magenis syndrome chromosome region, candidate 7-like (SMCR7L), mRNAbtcn31220, btcn27220, DV839120 Bt.1132.1.S1_at, Bt.1132.2.S1_at Bt.1132.1.S1_at, Bt.1132.2.S1_at Bt.3077.1.S1_at, Bt.1132.1.S1_at, Bt.19161.1.S1_at, Bt.20928.1.S1_at, Bt.24911.1.A1_at, Bt.1132.2.S1_at
12564:5850_CL1Contig2-B:rNM_000035Homo sapiens aldolase B, fructose-bisphosphate (ALDOB), mRNANM_001034485Bos taurus similar to Fructose-bisphosphate aldolase B (Liver-type aldolase) (MGC127229), mRNA4e-33BM432347, DV790812, btcn54562 Bt.5125.1.S1_at (69 bases away) Bt.5125.1.S1_at Bt.5125.1.S1_at
12565:45360_CL825Contig1-A:fNM_197977, NM_003452Homo sapiens zinc finger protein 189 (ZNF189), transcript variant 1, mRNAXM_878975PREDICTED: Bos taurus similar to zinc finger protein 189, transcript variant 3 (LOC540816), mRNA4e-33btcn54567 Bt.27093.1.S1_at
12566:6006_CL1Contig1-B:rNM_019051Homo sapiens mitochondrial ribosomal protein L50 (MRPL50), nuclear gene encoding mitochondrial protein, mRNAXM_592653PREDICTED: Bos taurus similar to mitochondrial ribosomal protein L50 (LOC514753), mRNA4e-33btcn54560, btcn54561, DV870923 Bt.21051.1.S1_at Bt.21051.1.S1_at Bt.21051.1.S1_at
12567:4045_CL1Contig1-A:fNM_207299, NM_017753Homo sapiens plasticity related gene 3 (PRG-3), transcript variant 2, mRNAbtcn54558 Bt.28533.1.S1_at (14890 bases away)
12568:12085_CL1Contig1-A:fNM_032342Homo sapiens chromosome 9 open reading frame 125 (C9orf125), mRNAbtcn49524 Bt.29488.1.S1_at (5252 bases away)
12569:45360_CL153Contig1-B:rNM_012119, NM_001039803, NM_178432Homo sapiens cell cycle related kinase (CCRK), transcript variant 2, mRNAXM_879150PREDICTED: Bos taurus similar to cell cycle related kinase isoform 1, transcript variant 5 (LOC510920), mRNA4e-33BF039833, btcn38729, btcn38730, btcn38731, AV605130 Bt.5277.3.S1_at, Bt.5277.2.S1_at, Bt.5277.2.S1_a_at Bt.5277.3.S1_at, Bt.5277.1.S1_at, Bt.5277.2.S1_a_at Bt.5277.3.S1_at, Bt.5277.2.S1_at, Bt.5277.1.S1_at, Bt.5277.2.S1_a_at Bt.5277.3.S1_at, Bt.5277.2.S1_at, Bt.5277.2.S1_a_at Bt.5277.3.S1_at, Bt.5277.2.S1_at, Bt.5277.1.S1_at, Bt.5277.2.S1_a_at
1256:45900_CL6Contig2-A:fNM_000183Homo sapiens hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit (HADHB), nuclear gene encoding mitochondrial protein, mRNANM_174336Bos taurus dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit (HADHB), mRNA4e-33btcn52066, CB462034 Bt.832.1.S1_at Bt.832.1.S1_at
12571:18259_CL1Contig1-B:rNM_012119 (37766 bases away)Homo sapiens cell cycle related kinase (CCRK), transcript variant 2, mRNAbtcn38725 Bt.11050.1.S1_at
12572:19770_CL1Contig1-A:rNM_003692Homo sapiens transmembrane protein with EGF-like and two follistatin-like domains 1 (TMEFF1), mRNAXM_879250PREDICTED: Bos taurus similar to transmembrane protein with EGF-like and two follistatin-like domains 1, transcript variant 4 (LOC534309), mRNA4e-33CB449227, CN438322, btcn38736 Bt.20815.1.A1_at (4439 bases away) Bt.20815.1.A1_at (59 bases away) Bt.20815.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12573:8018_CL1Contig1-B:rNM_019592Homo sapiens ring finger protein 20 (RNF20), mRNAXM_590991PREDICTED: Bos taurus similar to ring finger protein 20 (LOC513326), partial mRNA4e-33btcn14887, CB430957, DN534031 Bt.10397.1.A1_at, Bt.10397.2.S1_at Bt.10397.1.A1_at, Bt.10397.2.S1_at Bt.10397.1.A1_at, Bt.10397.2.S1_at
12574:23872_CL1Contig1-A:rNM_133445Homo sapiens glutamate receptor, ionotropic, N-methyl-D-aspartate 3A (GRIN3A), mRNAXM_600419PREDICTED: Bos taurus similar to Glutamate [NMDA] receptor subunit 3A precursor (N-methyl-D-aspartate receptor subtype NR3A) (NMDAR-L) (LOC522145), mRNA4e-33btcn14891 Bt.10397.1.A1_at (8876 bases away)
12575:45360_CL1527Contig1-B:fNM_005502Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 1 (ABCA1), mRNANM_001024693Bos taurus ATP-binding cassette sub-family A member 1 (ABCA1), mRNA4e-33btcn55304 Bt.19423.2.S1_at (412 bases away)
12578:10500_28291048-A:fNM_015469, NM_018376Homo sapiens nipsnap homolog 3A (C. elegans) (NIPSNAP3A), mRNAbtcn55307.1, btcn964
12579:16659_CL1Contig2-A:rNM_182739, NM_002493Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa (NDUFB6), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNANM_175787Bos taurus NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa (NDUFB6), mRNA1e-30btcn1353, btcn1352, btcn1355 Bt.893.1.S1_at Bt.893.1.S1_at Bt.893.1.S1_at
1257:2937_17888712-A:fNM_153835Homo sapiens G protein-coupled receptor 113 (GPR113), mRNABM253113 Bt.832.1.S1_at (10543 bases away)
12580:11577_CL1Contig1-A:fNM_005802Homo sapiens topoisomerase I binding, arginine/serine-rich (TOPORS), mRNAXM_601617PREDICTED: Bos taurus similar to topoisomerase I binding, arginine/serine-rich (LOC523321), mRNA4e-33btcn1356 Bt.15703.1.S1_at, Bt.15703.2.S1_at, Bt.15703.2.S1_a_at
12581:45360_6745415-A:fNM_183395, NM_004895Homo sapiens cold autoinflammatory syndrome 1 (CIAS1), transcript variant 1, mRNAXM_581687PREDICTED: Bos taurus similar to cryopyrin isoform a (LOC538639), mRNA1e-30AW316159 Bt.14006.2.S1_at (119117 bases away)
12582:4159_CL2Contig1-B:fNM_001827Homo sapiens CDC28 protein kinase regulatory subunit 2 (CKS2), mRNAbtcn15792 Bt.13573.1.A1_at
12583:20320_CL2Contig1-B:fNM_024077Homo sapiens SECIS binding protein 2 (SECISBP2), mRNAXM_864499PREDICTED: Bos taurus similar to SECIS binding protein 2 (LOC613563), mRNA4e-33BG693493, btcn15799 Bt.13573.1.A1_at (1980 bases away) Bt.13573.1.A1_at (1974 bases away)
12584:14075_51808872-B:f
12585:5151_CL3Contig1-B:fNM_006705Homo sapiens growth arrest and DNA-damage-inducible, gamma (GADD45G), mRNAXM_581136PREDICTED: Bos taurus similar to growth arrest and DNA-damage-inducible, gamma (LOC504939), mRNA4e-33btcn15804, CB423548 Bt.16024.1.S1_at (322423 bases away) Bt.16024.1.S1_at (322996 bases away)
12586:12773_CL1Contig3-B:rNM_144488, NM_134427, NM_021106, NM_130795, NM_144489Homo sapiens regulator of G-protein signalling 3 (RGS3), transcript variant 2, mRNAXM_872424PREDICTED: Bos taurus similar to regulator of G-protein signalling 3 isoform 1, transcript variant 8 (LOC527349), mRNA1e-30btcn47191, btcn47192, btcn47190 Bt.8030.1.S1_at (800 bases away) Bt.8030.1.S1_at (115 bases away) Bt.8030.1.S1_at, Bt.8030.2.S1_at
12588:13617_10167967-A:fNM_152786Homo sapiens chromosome 9 open reading frame 43 (C9orf43), mRNAXM_865299PREDICTED: Bos taurus hypothetical protein LOC614006 (LOC614006), mRNA4e-33btcn47184 Bt.27905.1.S1_at (2148 bases away)
1258:10436_45059366-B:fNM_033505Homo sapiens selenoprotein I (SELI), mRNAXM_582819PREDICTED: Bos taurus similar to Selenoprotein I (LOC506381), mRNA4e-33btcn52112, btcn52111 Bt.22101.1.A1_at (2990 bases away) Bt.22101.1.A1_at (1065 bases away)
12590:19484_CL1Contig1-A:fNM_001034390Bos taurus polymerase (DNA directed), epsilon 3 (p17 subunit) (POLE3), mRNA4e-33
12591:4066_CL1Contig3-B:rNM_001014895Bos taurus delta-aminolevulinic acid dehydratase isoform b (ALAD), mRNA4e-33
12592:3261_CL1Contig1-A:rNM_031219 (147 bases away)Homo sapiens haloacid dehalogenase-like hydrolase domain containing 3 (HDHD3), mRNANM_001014896Bos taurus haloacid dehalogenase-like hydrolase domain containing 3 (HDHD3), mRNA4e-33btcn47181 Bt.9507.1.S1_at
12593:12860_CL1Contig1-B:fNM_017688Homo sapiens B-box and SPRY domain containing (BSPRY), mRNAXM_587853PREDICTED: Bos taurus similar to B-box and SPRY domain containing (LOC510681), mRNA4e-33btcn47188 Bt.1206.1.S1_at
12594:12957_CL1Contig1-B:rNM_001012361, NM_145241, NM_001006615Homo sapiens WD repeat domain 31 (WDR31), transcript variant 3, mRNAXM_606693PREDICTED: Bos taurus similar to WD-repeat protein 31 (LOC528277), mRNA4e-33btcn47197 Bt.27925.1.A1_at (10231 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12595:30206_CL1Contig1-A:fNM_145051Homo sapiens ring finger protein 183 (RNF183), mRNANM_001035422Bos taurus similar to ring finger protein 183 (MGC128943), mRNA4e-33btcn47182 Bt.27925.1.A1_at
12596:5868_CL1Contig2-B:rNM_145051 (5640 bases away)Homo sapiens ring finger protein 183 (RNF183), mRNANM_001034330Bos taurus similar to U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD splicing factor Prp4) (hPrp4) (MGC129043), mRNA4e-33DN276108, btcn47168, btcn47169, DN278965, btcn47167 Bt.16360.1.A1_at Bt.16360.1.A1_at Bt.16360.1.A1_at (119 bases away) Bt.16360.1.A1_at Bt.16360.1.A1_at
12597:3271_CL1Contig1-B:fXM_940174, XM_930540, NM_139286, XM_935675Homo sapiens cell division cycle 26 (CDC26), mRNADV841577, btcn47165, btcn47164 Bt.13864.1.A1_at, Bt.28697.1.S1_at Bt.13864.1.A1_at Bt.13864.1.A1_at
12599:16135_CL1Contig1-B:rXM_936355, XM_376903PREDICTED: Homo sapiens KIAA0674 (KIAA0674), mRNAbtcn47162, AW336108 Bt.26755.3.S1_a_at, Bt.26755.2.S1_a_at, Bt.7000.1.S1_at, Bt.26755.1.S1_at Bt.26755.2.S1_a_at
1259:24890_CL1Contig1-B:rNM_001037591Bos taurus hypothetical protein LOC92749 (FLJ32660), mRNA4e-33
125:21958_CL1Contig1-B:fNM_002808Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 (PSMD2), mRNAXM_589444PREDICTED: Bos taurus similar to proteasome 26S non-ATPase subunit 2 (LOC539784), mRNA4e-33btcn42210 Bt.20443.1.S1_at
12600:45360_CL140Contig1-B:rNM_033051 (47577 bases away)Homo sapiens thymic stromal co-transporter (TSCOT), mRNAXM_590993PREDICTED: Bos taurus similar to alpha-2u globulin PGCL4, transcript variant 1 (LOC513329), mRNA4e-33btcn47187, btcn47186.1
12601:21758_CL1Contig1-A:rNM_003329Homo sapiens thioredoxin (TXN), mRNANM_173968Bos taurus thioredoxin (TXN), mRNA4e-33DV777184, CB467092.1, DV775489, DT891336, btcn7715, btcn12270.1, btcn7716, DV905402, btcn7714 Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at Bt.231.1.S1_at
12602:10887_CL1Contig1-A:rNM_147150, NM_007203, NM_053016, NM_001037293Homo sapiens PALM2-AKAP2 protein (PALM2-AKAP2), transcript variant 1, mRNAXM_866030PREDICTED: Bos taurus similar to A-kinase anchor protein 2 (Protein kinase A anchoring protein 2) (PRKA2) (AKAP-2) (LOC614497), partial mRNA4e-33btcn7722 Bt.18442.1.A1_at
12603:1552_9602975-A:fXM_945074, XM_928623, XM_933024, XM_941266PREDICTED: Homo sapiens sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, transcript variant 1 (SVEP1), mRNABE483442 Bt.22768.2.S1_at (4047 bases away)
12604:1552_CL1Contig1-B:rXM_945074, XM_933016, XM_928623, XM_933024, XM_941266, XM_945072PREDICTED: Homo sapiens sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, transcript variant 1 (SVEP1), mRNADN276925, btcn38464 Bt.22768.1.A1_at Bt.22768.1.A1_at, Bt.22768.2.S1_at
12605:34974_CL21Contig1-B:fNM_005592Homo sapiens muscle, skeletal, receptor tyrosine kinase (MUSK), mRNAXM_591182PREDICTED: Bos taurus similar to muscle, skeletal, receptor tyrosine kinase (LOC540052), mRNA4e-33btcn17 Bt.11323.1.A1_at (73200 bases away)
12606:8225_CL2Contig2-A:fNM_001401, NM_057159Homo sapiens endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 (EDG2), transcript variant 1, mRNANM_174047Bos taurus endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 (EDG2), mRNA4e-33btcn16869.1 Bt.123.1.S1_at
12607:7684_CL1Contig1-B:rNM_205859 (15139 bases away)Homo sapiens olfactory receptor, family 2, subfamily K, member 2 (OR2K2), mRNAXM_591252PREDICTED: Bos taurus similar to Proteasome-associated protein ECM29 homolog (Ecm29) (LOC513555), mRNA4e-33btcn16870 Bt.1527.1.A1_at
12608:45360_CL41Contig2-B:fNM_012212Homo sapiens leukotriene B4 12-hydroxydehydrogenase (LTB4DH), mRNANM_001035281Bos taurus leukotriene B4 12-hydroxydehydrogenase (LTB4DH), mRNA4e-21DT894369, DT901164, btcn16857 Bt.14010.1.S1_at Bt.14010.1.S1_at Bt.23624.1.S1_at, Bt.14010.1.S1_at
12609:7628_9700709-A:fNM_001017998, XM_940579, XM_929619, NM_004125Homo sapiens hypothetical protein LOC552891 (LOC552891), mRNAXM_874501PREDICTED: Bos taurus similar to Guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-10 subunit, transcript variant 3 (LOC613930), mRNA4e-33DY173198, AV589716, btcn16864.1, btcn16864, btcn16861, btcn16860, DV781695, btcn16862 Bt.2195.2.A1_at Bt.2195.2.A1_at Bt.2195.2.A1_at Bt.2195.2.A1_at Bt.2195.1.A1_at, Bt.2195.2.A1_at Bt.2195.1.A1_at, Bt.2195.2.A1_at Bt.2195.1.A1_at, Bt.2195.2.A1_at Bt.2195.2.A1_at
1260:24890_42727831-A:rNM_145038Homo sapiens chromosome 2 open reading frame 39 (C2orf39), mRNANM_001037591Bos taurus hypothetical protein LOC92749 (FLJ32660), mRNA6e-26btcn52091 Bt.25800.1.A1_at
12610:9345_CL1Contig1-B:fNM_003358Homo sapiens UDP-glucose ceramide glucosyltransferase (UGCG), mRNAXM_592193PREDICTED: Bos taurus similar to Ceramide glucosyltransferase (Glucosylceramide synthase) (GCS) (UDP-glucose:N-acylsphingosine D-glucosyltransferase) (UDP-glucose ceramide glucosyltransferase) (GLCT-1) (LOC514357), mRNA2e-25btcn46974 Bt.25887.1.A1_at
12611:2108_CL3Contig1-B:fNM_018660Homo sapiens zinc finger protein 395 (ZNF395), mRNAXM_585970PREDICTED: Bos taurus similar to zinc finger protein 395 (LOC509082), mRNA4e-33btcn32374, btcn32375 Bt.12628.1.S1_at (2316 bases away) Bt.12628.1.S1_at (6062 bases away)
12612:4399_CL1Contig1-B:rXM_939772 (232716 bases away)PREDICTED: Homo sapiens hypothetical gene supported by AK129923 (HMFN0672), mRNAbtcn32370 Bt.4295.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12613:37949_CL1Contig1-A:rXM_939772, XM_372035PREDICTED: Homo sapiens hypothetical gene supported by AK129923 (HMFN0672), mRNAXM_593744PREDICTED: Bos taurus hypothetical LOC515679 (LOC515679), mRNA4e-33btcn32387 Bt.19729.1.A1_at (39549 bases away)
12615:37949_C0007396e08-7-B:fXM_939772, XM_372035PREDICTED: Homo sapiens hypothetical gene supported by AK129923 (HMFN0672), mRNAXM_593744PREDICTED: Bos taurus hypothetical LOC515679 (LOC515679), mRNA4e-33DN523753, btcn32380, AM029501 Bt.19729.1.A1_at (23911 bases away) Bt.19729.1.A1_at (23911 bases away) Bt.19729.1.A1_at (14663 bases away)
12616:45360_9598777-B:fXM_866896PREDICTED: Bos taurus similar to protease, serine, 12 (LOC516087), mRNA1e-30
12617:5673_CL1Contig1-B:fNM_001017420 (8624 bases away)Homo sapiens establishment of cohesion 1 homolog 2 (S. cerevisiae) (ESCO2), mRNAXM_614666PREDICTED: Bos taurus similar to T-lymphokine-activated killer cell-originated protein kinase (T-LAK cell-originated protein kinase) (PDZ-binding kinase) (Spermatogenesis-related protein kinase) (SPK) (MAPKK-like protein kinase) (Nori-3) (LOC534781), mRNA4e-33btcn32377 Bt.12715.1.S1_at (23735 bases away)
12618:8268_45480564-A:fNM_001017420Homo sapiens establishment of cohesion 1 homolog 2 (S. cerevisiae) (ESCO2), mRNAXM_583858PREDICTED: Bos taurus similar to establishment of cohesion 1 homolog 2 (LOC538949), mRNA4e-33btcn32378 Bt.4511.1.S1_at (56898 bases away)
12619:8268_16744474-A:fNM_001017420Homo sapiens establishment of cohesion 1 homolog 2 (S. cerevisiae) (ESCO2), mRNAXM_583858PREDICTED: Bos taurus similar to establishment of cohesion 1 homolog 2 (LOC538949), mRNA4e-33btcn32382 Bt.4511.1.S1_at (33528 bases away)
1261:530_56135160-A:rNM_001029881Homo sapiens calcium and integrin binding family member 4 (CIB4), mRNAXM_869557PREDICTED: Bos taurus similar to calcium and integrin binding family member 4 (LOC617324), mRNA4e-33btcn52090 Bt.20305.1.S1_at (90526 bases away)
12620:294_CL1Contig1-A:fNM_018246Homo sapiens coiled-coil domain containing 25 (CCDC25), mRNANM_001035044Bos taurus similar to coiled-coil domain containing 25 isoform 1 (MGC127756), mRNA4e-33btcn32381 Bt.13267.1.S1_at, Bt.4511.1.S1_at
12621:5501_CL2Contig1-B:rXM_595569PREDICTED: Bos taurus similar to Sorting nexin-7 (LOC517400), partial mRNA4e-33btcn37142, btcn20289.1
12622:12358_CL2Contig1-B:rNM_133374Homo sapiens zinc finger protein 618 (ZNF618), mRNAXM_597571PREDICTED: Bos taurus similar to Zinc finger protein 37 (Zfp-37) (LOC519355), partial mRNA4e-33btcn12931 Bt.27155.1.A1_at (49340 bases away)
12623:8376_CL1Contig1-B:fNM_000880Homo sapiens interleukin 7 (IL7), mRNANM_173924Bos taurus interleukin 7 (IL7), mRNA4e-33btcn12708, btcn11941 Bt.12751.1.S1_at Bt.12751.1.S1_at
12624:45360_CL131Contig1-B:rXM_612563PREDICTED: Bos taurus similar to Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin) (GMEM) (JI) (Miotendinous antigen) (Glioma-associated-extracellular matrix antigen) (GP 150-225) (Tenascin-C) (TN-C) (LOC540664), partial mRNA4e-33
12625:24691_CL1Contig1-B:fNM_198187, NM_198186, NM_014010, NM_198188Homo sapiens astrotactin 2 (ASTN2), transcript variant 1, mRNAXM_612423PREDICTED: Bos taurus similar to astrotactin 2 isoform a (LOC533120), mRNA4e-33btcn31070 Bt.6707.1.S1_at
12626:4853_CL1Contig3-B:rNM_001018067, NM_015640, NM_001018069, NM_001018068Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript variant 4, mRNAXM_584549PREDICTED: Bos taurus similar to Plasminogen activator inhibitor 1 RNA-binding protein (PAI1 RNA-binding protein 1) (PAI-RBP1) (RDA288) (LOC539060), mRNA4e-33btcn31063, btcn31062, DV788895, CB430829, DV777037, CB431527, DV776950, CB438561, btcn31066 Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at Bt.3040.1.S1_at
12629:22499_CL1Contig1-B:rNM_030767 (5419 bases away)Homo sapiens AT-hook transcription factor (AKNA), mRNANM_001040502Bos taurus alpha-1 acid glycoprotein (AGP), mRNA4e-33btcn6554, DT861997, DR712604.1, DV789028, DT859516, CR452015, DT858195, DT858336, DV782240 Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at Bt.2490.1.A1_at
1262:1503_CL1Contig1-B:rNM_002246Homo sapiens potassium channel, subfamily K, member 3 (KCNK3), mRNAXM_597401PREDICTED: Bos taurus similar to Potassium channel subfamily K member 3 (Acid-sensitive potassium channel protein TASK-1) (TWIK-related acid-sensitive K(+) channel 1) (Two pore potassium channel KT3.1) (LOC519188), mRNA4e-33btcn52110 Bt.20305.1.S1_at (2122 bases away)
12630:1220_CL2Contig1-B:rNM_015404Homo sapiens deafness, autosomal recessive 31 (DFNB31), mRNAXM_874673PREDICTED: Bos taurus similar to CASK-interacting protein CIP98, transcript variant 2 (LOC533033), mRNA1e-24btcn6552 Bt.25791.1.A1_at (16363 bases away)
12632:1430_16226147-A:fNM_002581Homo sapiens pregnancy-associated plasma protein A, pappalysin 1 (PAPPA), mRNAXM_613511PREDICTED: Bos taurus pregnancy-associated plasma protein A (PAPPA), mRNA1e-30AF421141 Bt.13067.1.A1_at, Bt.13067.1.S1_at
12633:12358_CL1Contig2-B:fNM_133374Homo sapiens zinc finger protein 618 (ZNF618), mRNAXM_607030PREDICTED: Bos taurus similar to zinc finger protein 618 (LOC528603), partial mRNA4e-33btcn24070 Bt.27155.1.A1_at
12634:45360_CL47Contig1-B:rNM_001633Homo sapiens alpha-1-microglobulin/bikunin precursor (AMBP), mRNANM_173989Bos taurus inter-alpha-trypsin inhibitor (protein HC), light (AMBP), mRNA4e-33DV788781, DV783769, DV788248, DV788105, DV788400, DV786772, DV789323, DV790109, btcn24074, DV787441, BP106717, DV785192, DV790090, DV789820, btcn24071, DV783849, DV788797, CB532964, DV788710 Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at (540 bases away) Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at (473 bases away) Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at Bt.18392.1.A1_at (512 bases away) Bt.18392.1.A1_at Bt.18392.1.A1_at (458 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12635:44862_9738105-B:fNM_138424Homo sapiens kinesin family member 12 (KIF12), mRNAXM_588024PREDICTED: Bos taurus similar to Kinesin-like protein KIF12 (LOC510819), mRNA1e-30btcn24077 Bt.26496.1.A1_a_at (1045 bases away)
12636:24691_18530939-A:fNM_198187, NM_198186, NM_014010Homo sapiens astrotactin 2 (ASTN2), transcript variant 1, mRNAXM_608499PREDICTED: Bos taurus similar to astrotactin 2 isoform b (LOC530036), mRNA4e-33BM480611 Bt.2883.1.A1_at (414005 bases away)
12637:16679_CL1Contig1-B:rNM_138554Homo sapiens toll-like receptor 4 (TLR4), mRNANM_174198Bos taurus toll-like receptor 4 (TLR4), mRNA4e-33btcn37427 Bt.9030.1.S1_at
12638:19005_45488032-A:fNM_014314Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 (DDX58), mRNAXM_580928PREDICTED: Bos taurus similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide RIG-I, transcript variant 1 (LOC504760), mRNA4e-33btcn20910, btcn55120 Bt.24033.1.A1_at Bt.24033.1.A1_at
12639:15851_CL1Contig3-B:rNM_002197Homo sapiens aconitase 1, soluble (ACO1), mRNAXM_590607PREDICTED: Bos taurus similar to Iron-responsive element binding protein 1 (IRE-BP 1) (Iron regulatory protein 1) (IRP1) (Ferritin repressor protein) (Aconitate hydratase) (Citrate hydro-lyase) (Aconitase) (LOC512995), mRNA4e-33btcn55119, btcn55116, btcn55118 Bt.1344.1.S1_at Bt.1344.1.S1_at (148 bases away) Bt.1344.1.S1_at (285 bases away)
1263:16883_CL1Contig1-B:fNM_024596 (722619 bases away)Homo sapiens microcephaly, primary autosomal recessive 1 (MCPH1), mRNAXM_864043PREDICTED: Bos taurus similar to Centromere protein A (CENP-A) (Centromere autoantigen A), transcript variant 1 (LOC613681), mRNA4e-33btcn52107.2, btcn52108.2, DV818436.3, DV820120.2 Bt.11794.1.S1_at (324530 bases away) Bt.11794.1.S1_at (323557 bases away) Bt.11794.1.S1_at (323096 bases away) Bt.11794.1.S1_at (323337 bases away)
12640:3062_CL1Contig1-B:fNM_001015669Bos taurus deleted in bladder cancer 1 (DBC1), mRNA4e-33
12643:11689_CL1Contig2-B:fNM_001735Homo sapiens complement component 5 (C5), mRNAXM_589483PREDICTED: Bos taurus similar to complement component 5 (LOC512045), mRNA4e-33btcn19666, btcn19665 Bt.5622.1.S1_at Bt.5622.1.S1_at
12644:10504_CL2Contig1-B:rNM_005658Homo sapiens TNF receptor-associated factor 1 (TRAF1), mRNAXM_613776PREDICTED: Bos taurus similar to TNF receptor-associated factor 1 (LOC540944), mRNA4e-33btcn19672, btcn19671 Bt.9083.1.S1_at (7430 bases away) Bt.9083.1.S1_at
12645:6284_7526361-A:fNM_015651Homo sapiens PHD finger protein 19 (PHF19), transcript variant 1, mRNAXM_610565PREDICTED: Bos taurus similar to PHD finger protein 19 isoform a (LOC532056), mRNA4e-33btcn19683 (8 bases away)
12646:20329_7526943-A:fNM_015651 (7392 bases away)Homo sapiens PHD finger protein 19 (PHF19), transcript variant 1, mRNAXM_869040PREDICTED: Bos taurus similar to Protein CutA precursor (Brain acetylcholinesterase putative membrane anchor) (LOC616903), mRNA4e-33AW670429 Bt.27122.1.S1_at (5404 bases away)
12648:7170_CL1Contig1-B:fNM_005047Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 (PSMD5), mRNAXM_592959PREDICTED: Bos taurus similar to 26S proteasome non-ATPase regulatory subunit 5 (26S proteasome subunit S5B) (26S protease subunit S5 basic), transcript variant 1 (LOC515021), mRNA4e-33btcn19675 Bt.1773.1.S1_at
12649:15145_CL1Contig2-A:f
1264:1777_46417358-A:fNM_020134Homo sapiens dihydropyrimidinase-like 5 (DPYSL5), mRNAXM_615289PREDICTED: Bos taurus similar to dihydropyrimidinase-like 5, transcript variant 1 (LOC541251), mRNA4e-33btcn52097 Bt.9944.1.S1_at
12650:12514_45455801-A:fXM_376905, XM_936860PREDICTED: Homo sapiens similar to Multiple EGF-like-domain protein 5 precursor (Multiple epidermal growth factor-like domains 9) (LOC645419), mRNAXM_613349PREDICTED: Bos taurus similar to Multiple EGF-like-domain protein 5 precursor (Multiple epidermal growth factor-like domains 9) (LOC533820), mRNA4e-33btcn19680 Bt.9781.1.S1_at (4136 bases away)
12651:34044_29255862-A:fNM_018249, NM_001011649Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 1, mRNACB449480 Bt.9781.1.S1_at (16369 bases away)
12652:43271_CL1Contig1-B:fNM_004099Homo sapiens stomatin (STOM), transcript variant 1, mRNAXM_869198PREDICTED: Bos taurus similar to Erythrocyte band 7 integral membrane protein (Stomatin) (Protein 7.2b) (LOC617026), partial mRNA4e-33btcn9372.1, DV785815 Bt.28617.1.S1_at (13213 bases away) Bt.28617.1.S1_at (13213 bases away)
12653:3109_CL1Contig1-B:fNM_000177, NM_198252Homo sapiens gelsolin (amyloidosis, Finnish type) (GSN), transcript variant 1, mRNANM_001034627Bos taurus similar to Gelsolin precursor (Actin-depolymerizing factor) (ADF) (Brevin) (AGEL) (MGC127421), mRNA4e-33btcn9373, DV796213, btcn23997, btcn23995 Bt.12906.1.S1_at Bt.12906.1.S1_at Bt.12906.1.S1_at Bt.12906.1.S1_at
12654:45360_CL1532Contig1-A:rXM_939772 (978095 bases away)PREDICTED: Homo sapiens hypothetical gene supported by AK129923 (HMFN0672), mRNAbtcn7557.1 Bt.4295.1.S1_at (745960 bases away)
12655:45360_6989464-A:f

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12657:7006_28303750-A:rNM_203339, NM_001831Homo sapiens clusterin (CLU), transcript variant 1, mRNANM_173902Bos taurus clusterin (CLU), mRNA5e-14CB465403, DV787784, CB165387, DV784402, btcn37004, DV782473, CV976638, DN515934, BE480541, DV795937, CX948923, btcn37002, DV784246 Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at Bt.12504.1.S1_at
12658:22794_45071266-A:fNM_032783 (226586 bases away)Homo sapiens carbonyl reductase 4 (CBR4), mRNAXM_869983PREDICTED: Bos taurus similar to palladin (LOC617678), mRNA4e-33CK837732 Bt.18314.1.A1_at
12659:22794_CL3Contig1-B:fNM_032783 (35043 bases away)Homo sapiens carbonyl reductase 4 (CBR4), mRNAXM_869983PREDICTED: Bos taurus similar to palladin (LOC617678), mRNA4e-33btcn35708, DV896012 Bt.663.1.S1_at Bt.663.1.S1_at (1216 bases away)
1265:6047_CL2Contig1-B:rNM_012326Homo sapiens microtubule-associated protein, RP/EB family, member 3 (MAPRE3), mRNAXM_880904PREDICTED: Bos taurus similar to microtubule-associated protein, RP/EB family, member 3, transcript variant 3 (LOC528839), mRNA4e-33DV832665, btcn52085, btcn52087, DT893663 Bt.10811.1.S1_at Bt.10811.1.S1_at (183 bases away) Bt.10811.1.S1_at Bt.10811.1.S1_at
12660:7936_CL20Contig2-B:rNM_032783 (1972 bases away)Homo sapiens carbonyl reductase 4 (CBR4), mRNAXM_612274PREDICTED: Bos taurus similar to carbonic reductase 4 (LOC533020), mRNA4e-33CN438430, btcn35711 Bt.2019.1.S1_at (23337 bases away) Bt.2019.1.S1_at
12661:10356_CL2Contig1-B:rNM_017958, NM_203339, NM_001831Homo sapiens clusterin (CLU), transcript variant 1, mRNAXM_591153PREDICTED: Bos taurus similar to pleckstrin homology domain containing, family B (evectins) member 2 (LOC513469), mRNA4e-33btcn55716.1, btcn37008.1 Bt.12504.1.S1_at (684 bases away) Bt.12504.1.S1_at (2901 bases away)
12662:6829_CL2Contig1-A:rXM_590571PREDICTED: Bos taurus similar to leucine rich repeat neuronal 6C, transcript variant 1 (LOC539968), mRNA6e-23
12663:20696_CL1Contig1-A:rNM_018325, NM_145005Homo sapiens chromosome 9 open reading frame 72 (C9orf72), transcript variant 1, mRNAXM_874259PREDICTED: Bos taurus similar to Protein C9orf72 homolog, transcript variant 3 (LOC506309), mRNA4e-33CN791439 Bt.17570.1.A1_at (638548 bases away)
12664:22061_CL6Contig1-B:rNM_024761Homo sapiens MOB1, Mps One Binder kinase activator-like 2B (yeast) (MOBKL2B), mRNAXM_613282PREDICTED: Bos taurus similar to MOB1, Mps One Binder kinase activator-like 2B (LOC540817), mRNA4e-33DT722893, btcn31404 Bt.17377.1.S1_at (709 bases away) Bt.17377.1.S1_at
12666:25556_CL1Contig1-A:rNM_020641Homo sapiens chromosome 9 open reading frame 11 (C9orf11), mRNAXM_867913PREDICTED: Bos taurus hypothetical protein LOC615968 (LOC615968), mRNA4e-33btcn31417 Bt.16406.1.A1_at, Bt.16498.1.A1_at
12668:8083_CL2Contig1-B:fNM_000459 (1897 bases away)Homo sapiens TEK tyrosine kinase, endothelial (venous malformations, multiple cutaneous and mucosal) (TEK), mRNAXM_612827PREDICTED: Bos taurus similar to transcription elongation factor B polypeptide 3 binding protein 1 isoform 1, transcript variant 2 (LOC533427), mRNA4e-33btcn31424 Bt.24687.1.A1_at
12669:27520_CL1Contig1-B:rNM_000459Homo sapiens TEK tyrosine kinase, endothelial (venous malformations, multiple cutaneous and mucosal) (TEK), mRNANM_173964Bos taurus TEK tyrosine kinase, endothelial (venous malformations, multiple cutaneous and mucosal) (TEK), mRNA1e-30btcn31412 Bt.4390.1.S1_at
1266:20609_CL1Contig1-B:rNM_017727Homo sapiens hypothetical protein FLJ20254 (FLJ20254), mRNAXM_592573PREDICTED: Bos taurus similar to CG33129-PE, isoform E, transcript variant 2 (LOC514683), mRNA4e-33CB426286, BF040240, CK394130, btcn52089 Bt.15859.1.S1_at Bt.15859.1.S1_at Bt.15859.1.S1_at Bt.15859.1.S1_at
12670:8621_CL1Contig1-B:fNM_025103Homo sapiens intraflagellar transport 74 homolog (Chlamydomonas) (IFT74), mRNAXM_591807PREDICTED: Bos taurus similar to coiled-coil domain containing 2, transcript variant 1 (LOC514024), mRNA4e-33btcn31421 Bt.28415.2.S1_at (12098 bases away)
12671:10802_CL1Contig1-B:rNM_001031689, NM_004253Homo sapiens phospholipase A2-activating protein (PLAA), transcript variant 2, mRNAXM_582468PREDICTED: Bos taurus similar to phospholipase A2-activating protein isoform 1, transcript variant 2 (LOC506073), mRNA1e-30btcn31410 Bt.28480.1.S1_at
12672:1387_CL1Contig1-B:rNM_024828Homo sapiens chromosome 9 open reading frame 82 (C9orf82), mRNAbtcn31411 Bt.27898.1.A1_at
12673:11272_CL1Contig3-B:rNM_014752, XM_930430, XM_944485, XM_940181, XM_934795, XM_944490, XM_934796, XM_934797, XM_944484Homo sapiens signal peptidase complex subunit 2 homolog (S. cerevisiae) (SPCS2), mRNAbtcn33744, btcn33741, btcn33742, CR851047 Bt.13704.1.S1_at Bt.13704.1.S1_at Bt.13704.1.S1_at Bt.13704.1.S1_at
12674:7018_CL6Contig1-A:rNM_006656Homo sapiens sialidase 3 (membrane sialidase) (NEU3), mRNANM_174122Bos taurus sialidase 3 (membrane sialidase) (NEU3), mRNA4e-33btcn33747 Bt.477.1.S1_at
12676:36947_CL1Contig2-A:fNM_002451Homo sapiens methylthioadenosine phosphorylase (MTAP), mRNAXM_617987PREDICTED: Bos taurus similar to S-methyl-5-thioadenosine phosphorylase (5-methylthioadenosine phosphorylase) (MTA phosphorylase) (MTAPase) (LOC537802), mRNA4e-33btcn12518, DV814937, btcn18585.2 Bt.5092.1.S1_at (433 bases away) Bt.5092.1.S1_at (688 bases away) Bt.5092.1.S1_at
12677:31129_CL1Contig1-A:rNM_058195, NM_000077, NM_058197Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) (CDKN2A), transcript variant 1, mRNAXM_868375PREDICTED: Bos taurus similar to Cyclin-dependent kinase 4 inhibitor A (CDK4I) (p16-INK4) (p16-INK4a) (Multiple tumor suppressor 1) (MTS1) (LOC616369), mRNA4e-33btcn12522 Bt.28657.1.A1_at (12088 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12678:31129_CL2Contig1-A:rNM_078487, NM_004936Homo sapiens cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) (CDKN2B), transcript variant 1, mRNAXM_605513PREDICTED: Bos taurus similar to Cyclin-dependent kinase 4 inhibitor B (p14-INK4b) (p15-INK4b) (Multiple tumor suppressor 2) (MTS2) (LOC527124), partial mRNA4e-33btcn12515 Bt.28657.1.A1_at
12679:6050_29258993-A:fNM_018847Homo sapiens kelch-like 9 (Drosophila) (KLHL9), mRNAbtcn46631, CB452611 Bt.19212.1.S1_at Bt.19212.1.S1_at (1604 bases away)
1267:6110_CL1Contig3-B:rXM_944389, XM_933739, XM_944388, XM_933743, XM_944394, XM_939932, XM_933735, XM_933745, XM_944387, XM_371542PREDICTED: Homo sapiens RW1 protein, transcript variant 1 (RW1), mRNAXM_613474PREDICTED: Bos taurus similar to RW1 protein (LOC540861), mRNA4e-33DN528928.1, btcn55935, btcn55936 Bt.11629.1.A1_at (86 bases away) Bt.11629.1.A1_at Bt.11629.1.A1_at (191 bases away)
12680:17670_15377194-A:fXM_601002PREDICTED: Bos taurus similar to CG18304-PA (LOC522716), partial mRNA2e-32
12681:9695_CL1Contig1-B:fNM_144966Homo sapiens FRAS1 related extracellular matrix 1 (FREM1), mRNAXM_865053PREDICTED: Bos taurus similar to FRAS1-related extracellular matrix protein 1 precursor (QBRICK protein), transcript variant 2 (LOC508018), mRNA4e-33btcn52758 Bt.21915.1.S1_at
12682:452_CL1Contig2-B:rNM_001039697Homo sapiens small nuclear RNA activating complex, polypeptide 3, 50kDa (SNAPC3), mRNAXM_611388PREDICTED: Bos taurus similar to small nuclear RNA activating complex, polypeptide 3, 50kDa (LOC511366), mRNA1e-30btcn52749 Bt.26201.1.A1_at, Bt.8562.1.S1_at, Bt.12290.1.S1_at, Bt.8562.2.A1_at
12683:6571_CL1Contig4-B:fNM_021144, NM_033222Homo sapiens PC4 and SFRS1 interacting protein 1 (PSIP1), transcript variant 1, mRNAXM_590212PREDICTED: Bos taurus PC4 and SFRS1 interacting protein 1 (PSIP1), mRNA4e-33CB451390, btcn52750, btcn52747, CX948110, btcn52752, btcn52749, btcn52756 Bt.26201.1.A1_at (3218 bases away) Bt.26201.1.A1_at (3438 bases away) Bt.26201.1.A1_at (1644 bases away) Bt.26201.1.A1_at (1643 bases away) Bt.26201.1.A1_at (1632 bases away) Bt.26201.1.A1_at, Bt.8562.1.S1_at, Bt.12290.1.S1_at, Bt.8562.2.A1_at Bt.26201.1.A1_at (3313 bases away)
12684:3240_CL1Contig1-B:rXM_617011PREDICTED: Bos taurus similar to multiple PDZ domain protein (LOC536863), partial mRNA4e-33
12685:3240_CL2Contig1-B:rNM_003829Homo sapiens multiple PDZ domain protein (MPDZ), mRNAXM_617011PREDICTED: Bos taurus similar to multiple PDZ domain protein (LOC536863), partial mRNA2e-32btcn34284, btcn34285 Bt.17452.1.S1_at, Bt.25277.1.A1_at Bt.17452.1.S1_at, Bt.25277.1.A1_at
12688:12129_CL3Contig1-B:rNM_001040712, NM_130391, NM_130392, NM_002839, NM_130393Homo sapiens protein tyrosine phosphatase, receptor type, D (PTPRD), transcript variant 1, mRNAXM_876998PREDICTED: Bos taurus similar to protein tyrosine phosphatase, receptor type, D isoform 2 precursor, transcript variant 30 (LOC532751), mRNA4e-33btcn53602 Bt.18753.1.A1_at
12689:24104_CL1Contig2-A:fNM_033428Homo sapiens chromosome 9 open reading frame 123 (C9orf123), mRNAbtcn53608, DV821319, btcn53606, DV791410, btcn53609, DT812627, btcn53607 Bt.24848.1.A1_at (494157 bases away) Bt.24848.1.A1_at (494254 bases away) Bt.24848.1.A1_at (494159 bases away) Bt.24848.1.A1_at (494165 bases away) Bt.24848.1.A1_at (494172 bases away) Bt.24848.1.A1_at (494280 bases away) Bt.24848.1.A1_at (494163 bases away)
1268:584_CL5Contig1-B:fNM_207519 (4994 bases away)Homo sapiens zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), transcript variant 2, mRNAXM_876478PREDICTED: Bos taurus similar to zeta-chain (TCR) associated protein kinase 70kDa, transcript variant 6 (LOC504509), mRNA4e-24btcn55942 Bt.11629.1.A1_at (25830 bases away)
12690:20205_CL1Contig1-B:fNM_014878Homo sapiens KIAA0020 (KIAA0020), mRNAXM_592879PREDICTED: Bos taurus similar to KIAA0020 isoform 1 (LOC514957), mRNA4e-33btcn21768, btcn21767 Bt.24626.1.S1_at Bt.24626.1.S1_at
12691:45360_CL328Contig2-B:rNM_003383, NM_001018056Homo sapiens very low density lipoprotein receptor (VLDLR), transcript variant 1, mRNANM_174489Bos taurus very low density lipoprotein receptor (vldlr), mRNA4e-33btcn21770 Bt.29875.1.S1_at, Bt.5484.1.S1_at, Bt.29875.1.A1_at, Bt.29875.1.S1_s_at
12692:4331_CL1Contig1-B:rNM_000550Homo sapiens tyrosinase-related protein 1 (TYRP1), mRNANM_174480Bos taurus tyrosinase-related protein 1 (TYRP1), mRNA4e-33btcn12639, DV906151, AF445638, btcn12640 Bt.221.1.S1_at Bt.221.1.S1_at Bt.221.1.S1_at Bt.221.1.S1_at
12693:14773_CL7Contig1-B:fNM_021252Homo sapiens RAB18, member RAS oncogene family (RAB18), mRNAXM_871543PREDICTED: Bos taurus similar to Ras-related protein Rab-18, transcript variant 5 (LOC511160), mRNA4e-33DV819255, btcn36886, DV871834.1 Bt.20678.1.A1_at Bt.20678.1.A1_at, Bt.13979.1.S1_at Bt.13979.1.S1_at (1052 bases away)
12694:14319_CL1Contig1-B:rNM_005772Homo sapiens RNA terminal phosphate cyclase-like 1 (RCL1), mRNAbtcn6319, btcn6317 Bt.27964.1.A1_at Bt.27964.1.A1_at
12695:1203_CL2Contig1-A:rNM_016282Homo sapiens adenylate kinase 3 (AK3), mRNANM_174237Bos taurus adenylate kinase 3 (AK3), mRNA4e-33btcn39947 Bt.5149.1.S2_at, Bt.5149.1.S1_at
12696:6939_CL2Contig1-B:fNM_017913Homo sapiens CDC37 cell division cycle 37 homolog (S. cerevisiae)-like 1 (CDC37L1), mRNAXM_587726PREDICTED: Bos taurus similar to cell division cycle 37 homolog (S. cerevisiae)-like 1, transcript variant 2 (LOC510572), mRNA4e-33btcn39941 Bt.3353.1.A1_at, Bt.9516.1.S1_at, Bt.9516.2.A1_at, Bt.28203.1.S1_at, Bt.3353.2.S1_at
12697:16889_9754180-C:f

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12698:9361_CL1Contig1-A:rNM_001039395, NM_203453Homo sapiens phosphatidic acid phosphatase type 2 domain containing 2 (PPAPDC2), mRNANM_001024573Bos taurus phosphatidic acid phosphatase type 2 domain containing 2 (PPAPDC2), mRNA4e-33btcn39938, btcn39941, btcn39937 Bt.3353.1.A1_at, Bt.28203.1.S1_at, Bt.3353.2.S1_at Bt.3353.1.A1_at, Bt.9516.1.S1_at, Bt.9516.2.A1_at, Bt.28203.1.S1_at, Bt.3353.2.S1_at Bt.3353.1.A1_at, Bt.28203.1.S1_at, Bt.3353.2.S1_at
12699:16497_CL1Contig2-B:rXM_872820PREDICTED: Bos taurus similar to Glycine dehydrogenase [decarboxylating], mitochondrial precursor (Glycine decarboxylase) (Glycine cleavage system P-protein), transcript variant 6 (LOC507688), mRNA4e-33
126:17739_CL2Contig1-B:fNM_001037324, NM_014693Homo sapiens endothelin converting enzyme 2 (ECE2), transcript variant 1, mRNANM_177957Bos taurus endothelin converting enzyme 2 (ECE2), transcript variant 2b-1, mRNA4e-33btcn42209 Bt.4840.1.S1_a_at, Bt.25024.1.S1_at
12700:1183_CL2Contig1-B:rNM_152896Homo sapiens ubiquitin-like, containing PHD and RING finger domains, 2 (UHRF2), mRNAXM_864841PREDICTED: Bos taurus similar to Np95-like ring finger protein isoform b (LOC613759), mRNA4e-33btcn9308 Bt.869.2.S1_at
12701:20924_CL1Contig1-B:rNM_033439Homo sapiens chromosome 9 open reading frame 26 (NF-HEV) (C9orf26), mRNAXM_583604PREDICTED: Bos taurus similar to chromosome 9 open reading frame 26 (NF-HEV) (LOC507054), mRNA4e-33btcn9309 Bt.22094.2.S1_at, Bt.22094.1.A1_at
12702:5440_CL1Contig2-B:fNM_004817, NM_201629Homo sapiens tight junction protein 2 (zona occludens 2) (TJP2), transcript variant 1, mRNAXM_864670PREDICTED: Bos taurus tight junction protein 2, transcript variant 2 (zo2), mRNA4e-33BF045678, btcn22215, btcn22212, btcn22214, DV930193 Bt.20601.2.S1_at Bt.29711.1.A1_at, Bt.20601.2.S1_at, Bt.20601.1.A1_at, Bt.29711.1.S1_at Bt.20601.2.S1_at, Bt.20601.1.A1_at Bt.20601.2.S1_at Bt.20601.2.S1_at, Bt.20601.1.A1_at
12703:26228_61013266-B:fNM_000144, NM_181425Homo sapiens frataxin (FXN), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNAXM_582022PREDICTED: Bos taurus similar to frataxin isoform 1 preproprotein (LOC505694), mRNA3e-28btcn22210, CB432613, DN548717 Bt.17029.1.A1_at Bt.17029.1.A1_at (5618 bases away) Bt.17029.1.A1_at (3119 bases away)
12704:5819_CL1Contig1-A:rNM_002518Homo sapiens neuronal PAS domain protein 2 (NPAS2), mRNAXM_865373PREDICTED: Bos taurus similar to neuronal PAS domain protein 2 (LOC614049), mRNA4e-33btcn22219 Bt.1601.1.S1_at (5554 bases away)
12705:39918_CL1Contig1-B:rNM_000993, XM_938755, NR_002595Homo sapiens ribosomal protein L31 (RPL31), mRNANM_001025341Bos taurus ribosomal protein L31 (RPL31), mRNA4e-33btcn22209, DV794674, AW461813, btcn22208 Bt.1601.1.S1_at Bt.1601.1.S1_at Bt.1601.1.S1_at Bt.1601.1.S1_at
12706:13951_CL1Contig2-B:rNM_001013004Bos taurus farnesyl-diphosphate farnesyltransferase 1 (FDFT1), mRNA4e-33
12707:8897_CL2Contig1-B:fNM_174031Bos taurus cathepsin B (CTSB), mRNA4e-33
12709:11474_CL1Contig2-A:rNM_153237 (11485 bases away)Homo sapiens chromosome 9 open reading frame 71 (C9orf71), mRNAbtcn13268 Bt.29371.1.A1_at (4048 bases away)
12710:4068_CL1Contig1-A:fNM_138333Homo sapiens family with sequence similarity 122A (FAM122A), mRNAXM_588926PREDICTED: Bos taurus similar to CG4497-PA (LOC539712), mRNA4e-33btcn13276, btcn13273 Bt.8236.1.S1_at, Bt.8236.2.A1_at Bt.8236.1.S1_at, Bt.8236.2.A1_at
12711:1591_CL2Contig1-B:fNM_003558, NM_001031687Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, beta (PIP5K1B), transcript variant 2, mRNAXM_864988PREDICTED: Bos taurus similar to phosphatidylinositol-4-phosphate 5-kinase, type I, beta isoform 2, transcript variant 2 (LOC537654), mRNA4e-33btcn13272 Bt.20732.1.A1_at
12712:11474_CL1Contig1-B:rXM_372112, NM_021965, XM_927635, NR_002836, XM_933079Homo sapiens phosphoglucomutase 5 pseudogene 2 (PGM5P2) on chromosome 9btcn30196.1, btcn14178 Bt.14203.1.A1_at (90489 bases away) Bt.14203.1.A1_at (51736 bases away)
12713:34727_61943239-A:fNM_199135, XM_928920, XM_928867, XM_932977, NM_207305, XM_933246, XM_928595, NM_199244, XM_933293, NM_012184, NM_199358Homo sapiens forkhead box D4-like 1 (FOXD4L1), mRNAXM_608111PREDICTED: Bos taurus similar to FOXD4-like 2 (LOC529657), mRNA4e-33DN639142 Bt.14203.1.A1_at (7054 bases away)
12714:9266_CL1Contig1-B:fNM_152569 (27289 bases away)Homo sapiens chromosome 9 open reading frame 66 (C9orf66), mRNAXM_875369PREDICTED: Bos taurus similar to COBW domain-containing protein 2, transcript variant 6 (LOC509455), mRNA4e-33btcn14176.1 Bt.21610.1.S1_at
12715:44376_CL3Contig1-B:fNM_203447Homo sapiens dedicator of cytokinesis 8 (DOCK8), mRNAXM_604336PREDICTED: Bos taurus similar to dedicator of cytokinesis 8 (LOC525976), mRNA4e-33btcn14181 Bt.28542.1.A1_at
12716:44376_CL13Contig1-A:fNM_203447Homo sapiens dedicator of cytokinesis 8 (DOCK8), mRNAbtcn52139, CB453173 Bt.17469.1.A1_at (42504 bases away) Bt.17469.1.A1_at (45283 bases away)
12717:45360_2921113-A:fNM_176616Bos taurus pregnancy-associated glycoprotein 5 (PAG5), mRNA4e-33btcn8102 Bt.15986.1.S1_at (56303 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12719:9265_CL1Contig1-B:rNM_013390Homo sapiens transmembrane protein 2 (TMEM2), mRNAXM_593521PREDICTED: Bos taurus similar to transmembrane protein 2 (LOC515491), mRNA4e-33btcn8097 Bt.17754.1.A1_at
1271:45360_CL1205Contig1-A:f
12720:30973_CL1Contig1-B:fNM_000689Homo sapiens aldehyde dehydrogenase 1 family, member A1 (ALDH1A1), mRNANM_174239Bos taurus aldehyde dehydrogenase 1 family, member A1 (ALDH1A1), mRNA4e-33btcn13211 Bt.4732.1.S1_at
12721:28383_CL1Contig1-B:fNM_145043 (2194 bases away)Homo sapiens nei like 2 (E. coli) (NEIL2), mRNANM_001013003Bos taurus nei like 2 (E. coli) (NEIL2), mRNA4e-33btcn14388 Bt.26303.1.A1_at
12722:43778_CL5Contig1-B:rXM_616466PREDICTED: Bos taurus GATA binding protein 4 (GATA4), mRNA4e-33
12723:34974_CL51Contig1-A:rNM_001715Homo sapiens B lymphoid tyrosine kinase (BLK), mRNAXM_872921PREDICTED: Bos taurus similar to Tyrosine-protein kinase BLK (B lymphocyte kinase) (p55-BLK), transcript variant 4 (LOC532587), mRNA2e-23btcn14397, BF603215 Bt.14590.1.A1_at Bt.14590.1.A1_at (735 bases away)
12724:209_CL15Contig1-B:fNM_006914Homo sapiens RAR-related orphan receptor B (RORB), mRNAXM_875808PREDICTED: Bos taurus similar to Nuclear receptor ROR-beta (Nuclear receptor RZR-beta), transcript variant 3 (LOC528382), mRNA4e-33btcn26232 Bt.27198.1.A1_at (5629 bases away)
12725:31319_CL7Contig1-B:fNM_017662Homo sapiens transient receptor potential cation channel, subfamily M, member 6 (TRPM6), mRNAXM_605991PREDICTED: Bos taurus similar to transient receptor potential cation channel, subfamily M, member 6 (LOC527597), mRNA4e-33btcn26237, AJ816221 Bt.6392.1.S1_at Bt.6392.1.S1_at
12727:20119_17889905-A:rNM_015225Homo sapiens KIAA0367 (KIAA0367), mRNAXM_596496PREDICTED: Bos taurus similar to BNIP2 motif containing molecule at the carboxyl terminal region 1 (LOC518308), mRNA2e-25BM254306 Bt.18615.1.A1_at (97398 bases away)
12728:8360_C0007393e12-7-A:rNM_015225Homo sapiens KIAA0367 (KIAA0367), mRNAbtcn51477 Bt.18615.1.A1_at (22168 bases away)
12729:770_CL2Contig1-A:fNM_001490Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1), mRNANM_177510Bos taurus glucosaminyl (N-acetyl) transferase 1, core 2 (GCNT1), mRNA4e-33btcn51472, BF774646 Bt.521.1.S1_at Bt.521.1.S1_at, Bt.17542.1.S1_at
1272:6316_CL1Contig5-B:rNM_016490 (98290 bases away)Homo sapiens hypothetical protein LOC51252 (LOC51252), mRNANM_001034046Bos taurus cytochrome c oxidase subunit Vb (COX5B), mRNA4e-33BP107157, btcn55931, btcn55927, DV793782, btcn55930, CF763405, DV797643, btcn55928, btcn55926.1, btcn55929, DV780551 Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at Bt.1568.1.S1_at
12730:4757_CL1Contig1-B:rNM_018339Homo sapiens riboflavin kinase (RFK), mRNAXM_592590PREDICTED: Bos taurus similar to riboflavin kinase (LOC514697), mRNA4e-33btcn51482 Bt.13743.1.A1_at
12731:45360_47684992-A:fNM_005088 (11305 bases away)Homo sapiens DNA segment on chromosome X and Y (unique) 155 expressed sequence, isoform 1 (DXYS155E), mRNAXM_606509PREDICTED: Bos taurus similar to Proprotein convertase subtilisin/kexin type 5 precursor (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) (LOC528098), mRNA4e-33CN789012 Bt.13743.1.A1_at (46125 bases away)
12732:45360_16744744-A:fXM_615636PREDICTED: Bos taurus similar to proprotein convertase subtilisin/kexin type 5 preproprotein (LOC535532), partial mRNA4e-33
12733:7515_CL1Contig2-B:fNM_012383Homo sapiens osteoclast stimulating factor 1 (OSTF1), mRNANM_174409Bos taurus osteoclast stimulating factor 1 (OSTF1), mRNA4e-33btcn20302, btcn20304 Bt.2888.1.S1_at Bt.10140.1.S1_at, Bt.2888.1.S1_at
12734:6496_CL2Contig1-B:rNM_017881Homo sapiens chromosome 9 open reading frame 95 (C9orf95), mRNAXM_587597PREDICTED: Bos taurus similar to Nicotinamide riboside kinase 1 (LOC510456), mRNA4e-33btcn20304 Bt.10140.1.S1_at, Bt.2888.1.S1_at
12735:10052_CL1Contig1-B:fXM_932091, XM_943380, XM_937606, XM_943379, XM_932109, XM_932103, XM_927454, XM_943383, XM_095991, XM_943369PREDICTED: Homo sapiens centrosomal protein 78kDa, transcript variant 1 (CEP78), mRNAXM_618114PREDICTED: Bos taurus similar to IP63 protein, transcript variant 1 (LOC537926), mRNA4e-33btcn35675, btcn35674 Bt.24231.1.A1_at, Bt.24231.2.S1_at Bt.24231.1.A1_at, Bt.24231.2.S1_at
12736:17432_10867393-A:fXM_939621, XM_048592PREDICTED: Homo sapiens KIAA1045 (KIAA1045), mRNAXM_867012PREDICTED: Bos taurus similar to Protein KIAA1045 (LOC615254), mRNA1e-30btcn30008 Bt.28152.1.S1_at (3923 bases away)
12737:10828_CL1Contig1-B:fNM_012266Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 5 (DNAJB5), mRNANM_001014959Bos taurus DnaJ (Hsp40) homolog, subfamily B, member 5 (DNAJB5), mRNA4e-33btcn29928, btcn29926 Bt.22163.1.S1_at Bt.17907.1.A1_at, Bt.19812.1.A1_at, Bt.22163.1.S1_at, Bt.21630.1.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12738:889_51812838-A:rXM_926324, XM_939263PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC642943), mRNAbtcn29926 (1481 bases away)
12739:22394_CL1Contig1-B:rNM_007126Homo sapiens valosin-containing protein (VCP), mRNANM_001034294Bos taurus similar to Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) (MGC128142), mRNA4e-33DV793090, btcn29929, btcn29931, btcn29934 Bt.7714.1.S1_at Bt.7714.1.S1_at Bt.7714.1.S1_at Bt.7714.1.S1_at
1273:5989_CL3Contig3-B:fNM_016466Homo sapiens ankyrin repeat domain 39 (ANKRD39), mRNAXM_877007PREDICTED: Bos taurus similar to ankyrin repeat domain 39, transcript variant 2 (LOC510840), mRNA1e-30btcn55939, btcn55940, btcn55938 Bt.20316.1.S1_at (10191 bases away) Bt.20316.1.S1_at (8349 bases away) Bt.20316.1.S1_at (7445 bases away)
12740:4366_CL1Contig4-B:fNM_004629Homo sapiens Fanconi anemia, complementation group G (FANCG), mRNANM_174718Bos taurus pinin, desmosome associated protein (PNN), mRNA4e-33AV665700, btcn29979, btcn29978, btcn29973, AF013073, btcn29977, btcn29972 Bt.4875.2.S1_at Bt.20872.1.A1_at, Bt.4875.2.S1_at, Bt.20872.2.S1_at, Bt.20872.3.S1_at, Bt.20872.3.S1_a_at Bt.4875.2.S1_at Bt.4875.2.S1_at Bt.4875.2.S1_at Bt.4875.2.S1_at Bt.4875.2.S1_at
12741:11326_CL1Contig1-B:rNM_032634, NM_152850Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class O (PIGO), transcript variant 1, mRNAbtcn29979, btcn29980, btcn29975 Bt.20872.1.A1_at, Bt.4875.2.S1_at, Bt.20872.2.S1_at, Bt.20872.3.S1_at, Bt.20872.3.S1_a_at Bt.20872.1.A1_at, Bt.20872.2.S1_at, Bt.20872.3.S1_at, Bt.20872.3.S1_a_at Bt.20872.1.A1_at
12742:7961_CL1Contig3-B:fNM_013442Homo sapiens stomatin (EPB72)-like 2 (STOML2), mRNANM_001038068Bos taurus similar to Stomatin-like protein 2 (SLP-2) (EPB72-like 2) (MGC134600), mRNA4e-33btcn29970, btcn29968, DV798262, btcn29971 Bt.21435.1.S1_at Bt.21435.1.S1_at Bt.21435.1.S1_at Bt.21435.1.S1_at
12743:613_CL1Contig1-B:fNM_025182Homo sapiens KIAA1539 (KIAA1539), mRNANM_001014893Bos taurus btKIAA1539 (KIAA1539), mRNA4e-33btcn30006, DV796448 Bt.740.1.S1_at Bt.740.1.S1_at
12744:1327_CL1Contig1-B:fNM_006377Homo sapiens unc-13 homolog B (C. elegans) (UNC13B), mRNAXM_877795PREDICTED: Bos taurus similar to UNC13 (C. elegans)-like, transcript variant 15 (LOC530692), mRNA4e-33btcn29996 Bt.20019.1.S1_at
12745:20925_CL1Contig1-B:rNM_006285Homo sapiens testis-specific kinase 1 (TESK1), mRNAXM_606040PREDICTED: Bos taurus similar to Dual-specificity testis-specific protein kinase 1 (Testicular protein kinase 1), transcript variant 1 (LOC527643), mRNA4e-33BM253108, btcn29983, AJ816944, btcn29981 Bt.3997.1.A1_at (1705 bases away) Bt.2969.1.A1_at (1091 bases away) Bt.3997.1.A1_at Bt.21980.1.S1_at, Bt.3997.1.A1_at
12746:10152_CL1Contig2-B:rNM_014450Homo sapiens signaling threshold regulating transmembrane adaptor 1 (SIT1), mRNAXM_878214PREDICTED: Bos taurus similar to SHP2-interacting transmembrane adaptor protein, transcript variant 2 (LOC512027), mRNA4e-33btcn30014 Bt.15678.2.S1_a_at
12747:18032_CL1Contig1-B:fNM_032818, NM_174923Homo sapiens chromosome 9 open reading frame 100 (C9orf100), mRNAXM_592691PREDICTED: Bos taurus hypothetical LOC514786 (LOC514786), mRNA4e-33btcn30002, btcn30001, DN281485 Bt.5506.1.A1_at (189 bases away) Bt.5506.1.A1_at (187 bases away) Bt.5506.1.A1_at (328 bases away)
12748:6892_CL1Contig4-B:rNM_032818Homo sapiens chromosome 9 open reading frame 100 (C9orf100), mRNAbtcn30004, btcn30003, AW353503, btcn30005 Bt.5506.1.A1_at Bt.5506.1.A1_at Bt.5506.1.A1_at Bt.5506.1.A1_at
12750:32_CL5Contig2-B:rNM_001216Homo sapiens carbonic anhydrase IX (CA9), mRNAXM_878449PREDICTED: Bos taurus similar to Carbonic anhydrase IX precursor (Carbonate dehydratase IX) (CA-IX) (CAIX) (Membrane antigen MN) (P54/58N) (Renal cell carcinoma-associated antigen G250) (RCC-associated antigen G250) (pMW1), transcript variant 7 (LOC511923), mRNA4e-33btcn29987, btcn29988, btcn29986, BE663311, btcn29985, DY058429, btcn29984 Bt.27842.1.S1_at, Bt.28317.1.S1_at Bt.27842.1.S1_at, Bt.28317.1.S1_at Bt.27842.1.S1_at, Bt.28317.1.S1_at Bt.27842.1.S1_at Bt.27842.1.S1_at, Bt.28317.1.S1_at Bt.27842.1.S1_at Bt.27842.1.S1_at, Bt.28317.1.S1_at
12751:44862_CL1Contig18-B:rNM_003289, NM_213674Homo sapiens tropomyosin 2 (beta) (TPM2), transcript variant 1, mRNANM_001010995Bos taurus tropomyosin 2 (TPM2), mRNA4e-33btcn29957, DV798032, DV796152, btcn29955, DV794746, DV799024, btcn29963, DV791957, DV794606, DV781765, btcn29961, DV794907, DV796691, DV799052, DV792284, BF261303, DV793705, btcn29960, DV796681, btcn29967, DV793084, DV791959, btcn29965, btcn29956, btcn29958, DV794344, DV794652, DV793977, DV795741, DV797634, btcn29962 Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at Bt.12477.1.S1_a_at, Bt.12477.2.S1_at
12752:7021_CL1Contig2-A:rNM_006289Homo sapiens talin 1 (TLN1), mRNAbtcn29947, btcn29948, btcn29954, btcn29953 Bt.5082.1.S1_at, Bt.22710.1.A1_at Bt.5082.1.S1_at Bt.5082.1.S1_at Bt.5082.1.S1_at
12753:7148_CL1Contig1-B:rNM_006368, NM_020944Homo sapiens cAMP responsive element binding protein 3 (CREB3), mRNANM_174286Bos taurus cAMP responsive element binding protein 3 (luman) (CREB3), mRNA4e-33btcn29941, btcn29937, btcn29938 Bt.7492.1.S1_at Bt.7492.1.S1_at Bt.7492.1.S1_at
12754:22399_CL1Contig1-B:rXM_941746, XM_376830, XM_933756, XM_945423PREDICTED: Homo sapiens KIAA0258, transcript variant 1 (KIAA0258), mRNANM_001038184Bos taurus similar to Protein KIAA0258 (MGC134309), mRNA4e-33BC111331, btcn29938, btcn29944 Bt.5023.1.S1_at Bt.7492.1.S1_at Bt.5023.1.S1_at (932 bases away)
12755:3376_CL1Contig1-B:rNM_003995Homo sapiens natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) (NPR2), mRNANM_174126Bos taurus natriuretic peptide receptor B/guanylate cyclase B (NPR2), mRNA4e-33btcn29992, DN534334 Bt.5447.1.S1_at Bt.5447.1.S1_at
12756:2733_CL2Contig1-B:fNM_032593Homo sapiens histidine triad nucleotide binding protein 2 (HINT2), mRNANM_174340Bos taurus histidine triad nucleotide binding protein 2 (HINT2), mRNA4e-33btcn29998 Bt.11196.1.S1_at
12757:9583_CL2Contig1-B:rNM_001042590, NM_001042589Homo sapiens chromosome 9 open reading frame 127 (C9orf127), transcript variant 2, mRNAbtcn29994, btcn29993 Bt.11196.1.S1_at (27727 bases away) Bt.11196.1.S1_at (39856 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12758:42823_CL9Contig1-B:rNM_017423Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7) (GALNT7), mRNAXM_602855PREDICTED: Bos taurus similar to N-acetylgalactosaminyltransferase 7 (Protein-UDP acetylgalactosaminyltransferase 7) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 7) (Polypeptide GalNAc transferase 7) (GalNAc-T7) (pp-GaNTase 7) (LOC524529), partial mRNA4e-33btcn53153, btcn53154 Bt.25345.1.A1_at (218689 bases away) Bt.25345.1.A1_at (216762 bases away)
12759:45360_CL154Contig1-B:fNM_005222 (273784 bases away)Homo sapiens distal-less homeobox 6 (DLX6), mRNANM_001037616Bos taurus high-mobility group box 2 (HMGB2), mRNA4e-33btcn53148.1, btcn50644.1 Bt.6397.1.S1_at, Bt.6397.2.S1_at Bt.6397.1.S1_at, Bt.6397.2.S1_at
1275:26321_6953433-A:fNM_020184Homo sapiens cyclin M4 (CNNM4), mRNAXM_600662PREDICTED: Bos taurus similar to cyclin M4 (LOC522382), mRNA6e-23AW425486 Bt.6534.1.S1_at (1551 bases away)
12760:8055_CL1Contig1-B:fNM_003864Homo sapiens Sin3A-associated protein, 30kDa (SAP30), mRNAbtcn53158, btcn53157 Bt.25345.1.A1_at (177742 bases away) Bt.25345.1.A1_at (177743 bases away)
12761:3625_45068892-A:rNM_021973Homo sapiens heart and neural crest derivatives expressed 2 (HAND2), mRNACX954531, btcn53152 Bt.25345.1.A1_at (9111 bases away) Bt.25345.1.A1_at (861 bases away)
12762:27942_CL1Contig3-A:fXM_594410PREDICTED: Bos taurus similar to RNA (guanine-9-) methyltransferase domain containing 3 (LOC516258), mRNA3e-28
12763:7258_CL1Contig2-B:fNM_016042, NM_001002269Homo sapiens exosome component 3 (EXOSC3), transcript variant 1, mRNANM_001035397Bos taurus similar to exosome component 3 isoform 2 (MGC127537), mRNA4e-33btcn30634, btcn30633 Bt.16104.1.S1_at Bt.16104.1.S1_at
12764:15625_CL1Contig1-B:fXM_591997PREDICTED: Bos taurus hypothetical LOC514189 (LOC514189), mRNA4e-33
12765:19703_CL1Contig1-B:rNM_024345Homo sapiens WD repeat domain 32 (WDR32), mRNAXM_586808PREDICTED: Bos taurus similar to WD repeat domain 32 (LOC509776), mRNA4e-33btcn30629 Bt.26986.1.S1_at
12766:19907_CL1Contig1-A:rXR_000888, XR_000886, NM_001034172, XR_001303, XM_937304, XM_929732, XM_936681, XR_001304, NM_033412, XR_001305, XR_000887, XR_000273PREDICTED: Homo sapiens similar to mitochondrial carrier triple repeat 1 (LOC442229), mRNAbtcn30630 Bt.11943.1.S1_at (1629 bases away)
12767:1325_CL3Contig1-A:fNM_003028Homo sapiens Src homology 2 domain containing adaptor protein B (SHB), mRNAXM_618475PREDICTED: Bos taurus similar to SHB (Src homology 2 domain containing) adaptor protein B (LOC538275), mRNA4e-21btcn30643 Bt.11943.1.S1_at (60606 bases away)
12768:10142_CL2Contig1-B:rNM_014791Homo sapiens maternal embryonic leucine zipper kinase (MELK), mRNAXM_598320PREDICTED: Bos taurus similar to Maternal embryonic leucine zipper kinase (hMELK) (Protein kinase PK38) (hPK38), transcript variant 1 (LOC520088), mRNA4e-33btcn18430, DY209540, DN287186 Bt.25834.1.A1_at Bt.25834.1.A1_at Bt.25834.1.A1_at
12769:3852_29257032-A:rNM_016734Homo sapiens paired box gene 5 (B-cell lineage specific activator) (PAX5), mRNAXM_879636PREDICTED: Bos taurus similar to Paired box protein Pax-5 (B-cell specific transcription factor) (BSAP), transcript variant 2 (LOC538371), mRNA4e-33CB450650 Bt.20339.1.S1_at (158648 bases away)
1276:6583_CL2Contig1-B:rNM_030805Homo sapiens lectin, mannose-binding 2-like (LMAN2L), mRNANM_001014953Bos taurus lectin, mannose-binding 2-like (LMAN2L), mRNA4e-33btcn55948, btcn55945, BE753416, DV870320, btcn55946 Bt.26705.1.S1_at, Bt.26705.2.S1_at Bt.26705.1.S1_at (40 bases away) Bt.26705.1.S1_at (3124 bases away) Bt.26705.1.S1_at Bt.26705.1.S1_at
12770:4279_CL1Contig1-A:rXM_945538, XM_945545, XM_933962, XM_933955, XM_929780, XM_945546, XM_945540, XM_945541, XM_941924, XM_933963, XM_933960, XM_933957PREDICTED: Homo sapiens region containing F-box protein 10; chromosome 9 open reading frame 105, transcript variant 1 (LOC644560), mRNAXM_867826PREDICTED: Bos taurus hypothetical protein LOC615897 (LOC615897), partial mRNA4e-33btcn49532 Bt.16145.1.A1_at (4484 bases away)
12771:14919_CL1Contig1-A:fNM_012166Homo sapiens F-box protein 10 (FBXO10), mRNAbtcn49545 Bt.10981.1.A1_at (26610 bases away)
12772:3799_CL1Contig2-A:fNM_022490 (138 bases away)Homo sapiens polymerase (RNA) I polypeptide E, 53kDa (POLR1E), mRNANM_001034408Bos taurus similar to RNA polymerase I associated factor 53 (MGC128728), mRNA4e-33btcn49531 Bt.10981.1.A1_at, Bt.10981.2.S1_at, Bt.10981.1.A1_a_at
12773:4749_CL1Contig1-A:fNM_014872Homo sapiens zinc finger and BTB domain containing 5 (ZBTB5), mRNAXM_597113PREDICTED: Bos taurus similar to Zinc finger and BTB domain containing protein 5, transcript variant 1 (LOC518910), mRNA4e-33btcn49542 Bt.27541.1.A1_at (1477 bases away)
12774:15916_CL1Contig1-B:fNM_012203Homo sapiens glyoxylate reductase/hydroxypyruvate reductase (GRHPR), mRNAXM_580934PREDICTED: Bos taurus similar to Glyoxylate reductase/hydroxypyruvate reductase (LOC504764), mRNA4e-33btcn49536, AW485338 Bt.5170.1.S1_at Bt.5170.1.S1_at
12776:23297_6954976-A:fNM_032226Homo sapiens zinc finger, CCHC domain containing 7 (ZCCHC7), mRNAXM_589235PREDICTED: Bos taurus similar to zinc finger, CCHC domain containing 7 (LOC511821), mRNA4e-33btcn25703, btcn49538 Bt.21210.1.A1_at, Bt.21210.2.S1_at Bt.21210.1.A1_at, Bt.21210.2.S1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12778:7281_10123227-A:fXM_618366PREDICTED: Bos taurus similar to hephaestin isoform a (LOC538170), partial mRNA4e-33
12779:4748_CL2Contig2-B:rNM_001034440Bos taurus similar to phosphatidylethanolamine-binding protein 4 (MGC127772), mRNA4e-33
1277:408_12122244-A:rXM_031009, XM_937145PREDICTED: Homo sapiens similar to fer-1 like protein 3 (LOC90342), mRNAXM_605028PREDICTED: Bos taurus similar to myoferlin isoform b (LOC526655), mRNA4e-33BF774344 Bt.26705.2.S1_at (1202 bases away)
12780:34600_CL1Contig2-B:rNM_018688Homo sapiens bridging integrator 3 (BIN3), mRNAXM_583673PREDICTED: Bos taurus similar to bridging integrator 3 (predicted), transcript variant 1 (LOC507115), mRNA4e-33DV785824, DV785301, btcn10245, CN791504 Bt.20023.1.S1_at (740 bases away) Bt.20023.1.S1_at (681 bases away) Bt.20023.1.S1_at (389 bases away) Bt.20023.1.S1_at (996 bases away)
12781:1538_CL3Contig1-B:fNM_199205, NM_021174Homo sapiens KIAA1967 (KIAA1967), transcript variant 1, mRNAXM_879923PREDICTED: Bos taurus similar to p30 DBC protein, transcript variant 2 (LOC507114), mRNA4e-33BI538265, btcn10268, btcn10270, btcn10269 Bt.20023.1.S1_at (1824 bases away) Bt.20023.1.S1_at (847 bases away) Bt.20023.1.S1_at (1998 bases away) Bt.28018.1.S1_at, Bt.20023.1.S1_at
12782:9125_CL1Contig1-B:fNM_021630, NM_176871, NM_198042Homo sapiens PDZ and LIM domain 2 (mystique) (PDLIM2), transcript variant 2, mRNANM_001034430Bos taurus similar to PDZ and LIM domain 2 (MGC127618), mRNA1e-30btcn10259, btcn10261 Bt.7871.1.S1_at Bt.7871.1.S1_at
12783:5174_CL1Contig1-B:rNM_001018003, NM_005775Homo sapiens sorbin and SH3 domain containing 3 (SORBS3), transcript variant 1, mRNAXM_584613PREDICTED: Bos taurus similar to Vinexin (SH3-containing adapter molecule-1) (SCAM-1) (LOC507914), mRNA4e-33btcn10264 Bt.1405.1.S1_at
12785:6356_CL6Contig1-B:rNM_015359Homo sapiens solute carrier family 39 (zinc transporter), member 14 (SLC39A14), mRNAXM_593460PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 14 (LOC515437), mRNA4e-33btcn10254 Bt.10001.1.A1_at
12786:10222_CL1Contig1-B:fNM_001722Homo sapiens polymerase (RNA) III (DNA directed) polypeptide D, 44kDa (POLR3D), mRNANM_001024499Bos taurus RNA polymerase III 53 kDa subunit RPC4 (POLR3D), mRNA4e-33btcn10266, btcn10267, AJ820692 Bt.20991.1.S1_at Bt.20991.1.S1_at (222 bases away) Bt.20991.1.S1_at
12787:12780_CL2Contig1-A:rXM_868218PREDICTED: Bos taurus similar to Phytanoyl-CoA hydroxylase interacting protein (Phytanoyl-CoA hydroxylase associated protein 1) (PAHXAP1) (PAHX-AP1) (LOC616243), mRNA4e-33
12788:2893_CL2Contig1-B:fXM_880068PREDICTED: Bos taurus similar to Bone morphogenetic protein 1 precursor (BMP-1) (Procollagen C-proteinase) (PCP) (Mammalian tolloid protein) (mTld), transcript variant 6 (LOC510360), mRNA4e-33
12789:7998_CL1Contig1-B:fNM_003018Homo sapiens surfactant, pulmonary-associated protein C (SFTPC), mRNANM_174462Bos taurus surfactant, pulmonary-associated protein C (SFTPC), mRNA4e-33btcn10272, btcn10271 Bt.8126.1.S1_at Bt.8126.1.S1_at
12790:1422_CL4Contig1-B:rNM_139278Homo sapiens leucine-rich repeat LGI family, member 3 (LGI3), mRNAXM_594818PREDICTED: Bos taurus similar to leucine-rich repeat LGI family, member 3 (LOC516661), mRNA4e-33AV612644, BM287029, CK776716 Bt.26351.1.A1_at Bt.26351.1.A1_at, Bt.26351.2.S1_at Bt.26351.1.A1_at, Bt.26351.2.S1_at
12791:4572_CL1Contig1-B:rNM_025232Homo sapiens receptor accessory protein 4 (REEP4), mRNANM_001034533Bos taurus similar to receptor expression enhancing protein 4 (MGC126940), mRNA4e-33btcn10243, btcn10244 Bt.12857.1.S1_at Bt.12857.1.S1_at
12793:13275_CL1Contig1-B:f
12794:22107_CL1Contig1-B:rNM_024815Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 18 (NUDT18), mRNAXM_586518PREDICTED: Bos taurus similar to nudix (nucleoside diphosphate linked moiety X)-type motif 18 (LOC509535), mRNA1e-30btcn10257, btcn10258 Bt.24473.1.S1_at (199 bases away) Bt.24473.1.S1_at
12795:6095_42726859-B:rNM_022749Homo sapiens retinoic acid induced 16 (RAI16), mRNAXM_880292PREDICTED: Bos taurus similar to retinoic acid induced 16, transcript variant 2 (LOC507256), mRNA4e-33AV592136, btcn10290, CR455786 Bt.24565.3.A1_a_at Bt.24565.1.S1_at, Bt.24565.3.A1_a_at Bt.24565.1.S1_at, Bt.24565.3.A1_a_at
12796:25919_CL1Contig1-B:rNM_001034431Bos taurus erythrocyte membrane protein band 4.9 (dematin) (EPB49), mRNA4e-33
12797:10588_CL2Contig1-B:rXM_582304PREDICTED: Bos taurus similar to fibroblast growth factor 17 precursor (LOC505936), mRNA4e-33
12798:2539_CL2Contig1-B:f

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12799:24976_CL1Contig1-B:fNM_003974Homo sapiens docking protein 2, 56kDa (DOK2), mRNAXM_592494PREDICTED: Bos taurus similar to docking protein 2 isoform a (LOC514616), mRNA4e-33btcn10281 Bt.2069.2.S1_at, Bt.2069.1.S1_at, Bt.2069.2.S1_a_at
1279:5008_CL1Contig1-B:fNM_017991Homo sapiens hypothetical protein FLJ10081 (FLJ10081), mRNAXM_870514PREDICTED: Bos taurus similar to CG8233-PC, isoform C (LOC618190), partial mRNA4e-33btcn46801, btcn55962 Bt.13620.1.A1_at Bt.13620.1.A1_at
127:24406_6954133-B:fXM_291028, XM_941744PREDICTED: Homo sapiens coiled-coil domain containing 39 (CCDC39), mRNAXM_614198PREDICTED: Bos taurus similar to CG17387-PA (LOC534432), mRNA4e-33btcn17230 Bt.27560.1.A1_at
12800:11226_9713266-A:fNM_014907Homo sapiens FERM and PDZ domain containing 1 (FRMPD1), mRNAXM_868427PREDICTED: Bos taurus similar to FERM and PDZ domain containing 1 (LOC616412), mRNA4e-33AV596222 Bt.13145.1.S1_at (47633 bases away)
12801:3129_12124343-A:fNM_005893Homo sapiens calicin (CCIN), mRNANM_174005Bos taurus calicin (CCIN), mRNA4e-33btcn5922 Bt.45.1.S1_at
12802:10521_CL1Contig2-A:rNM_022343Homo sapiens chromosome 9 open reading frame 19 (C9orf19), mRNAXM_880416PREDICTED: Bos taurus similar to chromosome 9 open reading frame 19, transcript variant 2 (LOC538565), mRNA4e-33btcn5920, btcn5921, DT837347 Bt.5599.1.S1_at Bt.5599.1.S1_at, Bt.1142.1.S1_at Bt.5599.1.S1_at, Bt.1142.1.S1_at
12803:28403_61946831-A:rNM_021111Homo sapiens reversion-inducing-cysteine-rich protein with kazal motifs (RECK), mRNAbtcn5923 Bt.5599.1.S1_at (36531 bases away)
12804:1620_CL1Contig4-B:rNM_174022Bos taurus clathrin, light polypeptide (Lca) (CLTA), mRNA3e-31
12805:1144_9606676-B:f
12806:3105_CL2Contig1-B:rNM_194329, NM_194330, NM_194332, NM_022781, NM_194328Homo sapiens ring finger protein 38 (RNF38), transcript variant 1, mRNANM_001034581Bos taurus ring finger protein 38 (RNF38), mRNA4e-33btcn37868 Bt.4320.1.S1_at (2245 bases away)
12808:45360_CL482Contig1-B:fNM_006158Homo sapiens neurofilament, light polypeptide 68kDa (NEFL), mRNANM_174121Bos taurus neurofilament, light polypeptide (NEFL), mRNA7e-32btcn50377, btcn50376 Bt.992.1.A1_at, Bt.580.1.S1_at Bt.580.1.S1_at (799 bases away)
12809:45360_CL183Contig1-B:fNM_006158 (27294 bases away)Homo sapiens neurofilament, light polypeptide 68kDa (NEFL), mRNAXM_582135PREDICTED: Bos taurus neurofilament, medium polypeptide (NEF3), mRNA4e-33btcn50374, DN276144, btcn50373, btcn50375, btcn50372 Bt.22856.1.S1_at (674 bases away) Bt.22856.1.S1_at (686 bases away) Bt.22856.1.S1_at Bt.22856.1.S1_at Bt.22856.1.S1_at (738 bases away)
1280:5715_15776667-A:fXM_940375, XM_496546PREDICTED: Homo sapiens kelch repeat and BTB (POZ) domain containing 9 (KBTBD9), mRNAXM_617297PREDICTED: Bos taurus similar to Kelch repeat and BTB domain containing protein 9 (LOC537141), mRNA4e-33BI775690 Bt.25880.2.S1_at (9030 bases away)
12810:11006_CL1Contig1-B:rNM_020893Homo sapiens KIAA1529 (KIAA1529), mRNAXM_584184PREDICTED: Bos taurus similar to KIAA1529 (LOC507550), partial mRNA4e-33btcn29670 Bt.16711.1.A1_at
12813:16248_45065662-A:fNM_020893Homo sapiens KIAA1529 (KIAA1529), mRNAXM_593678PREDICTED: Bos taurus similar to KIAA1529 (LOC515625), mRNA4e-33CK834834 Bt.16711.1.A1_at (44714 bases away)
12814:11006_CL2Contig1-A:rNM_020893Homo sapiens KIAA1529 (KIAA1529), mRNAXM_593678PREDICTED: Bos taurus similar to KIAA1529 (LOC515625), mRNA4e-33btcn29673 Bt.16711.1.A1_at (59778 bases away)
12815:2278_CL1Contig1-B:rNM_014290Homo sapiens tudor domain containing 7 (TDRD7), mRNAXM_880902PREDICTED: Bos taurus similar to tudor domain containing 7, transcript variant 5 (LOC506702), mRNA4e-33CF764386, btcn29662, DT892154 Bt.25103.2.A1_at, Bt.25103.1.S1_at Bt.25103.2.A1_at, Bt.25103.1.S1_at Bt.25103.2.A1_at, Bt.25103.1.S1_at
12816:36306_CL5Contig1-A:fNM_003275Homo sapiens tropomodulin 1 (TMOD1), mRNAbtcn29668 Bt.6964.1.S1_at, Bt.6964.3.S1_at, Bt.6964.2.A1_at
12817:1483_CL2Contig1-B:fNM_139246Homo sapiens chromosome 9 open reading frame 97 (C9orf97), mRNAXM_868823PREDICTED: Bos taurus hypothetical protein LOC616726 (LOC616726), mRNA4e-33btcn29665, btcn29666 Bt.6964.3.S1_at (16411 bases away) Bt.6964.3.S1_at (7661 bases away)
12818:24018_CL1Contig1-B:fNM_000380 (109 bases away)Homo sapiens xeroderma pigmentosum, complementation group A (XPA), mRNAXM_881017PREDICTED: Bos taurus similar to 80 kDa nuclear cap binding protein (NCBP 80 kDa subunit) (CBP80), transcript variant 5 (LOC507214), mRNA4e-33btcn29655 Bt.29437.1.A1_at

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12819:23494_CL1Contig1-B:rNM_016481Homo sapiens chromosome 9 open reading frame 156 (C9orf156), mRNAXM_584240PREDICTED: Bos taurus similar to CG12822-PA, isoform A (LOC507596), mRNA4e-33btcn29671 Bt.24619.1.S1_at
1281:17874_CL2Contig1-B:fNM_006277, NM_019595Homo sapiens intersectin 2 (ITSN2), transcript variant 1, mRNAXM_871682PREDICTED: Bos taurus similar to SH3 domain protein 1B, transcript variant 4 (LOC521706), mRNA4e-33btcn33792 Bt.20067.1.S1_at
12820:6979_CL2Contig1-B:rXM_936564, XM_929745, NM_006401Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (ANP32B), mRNANM_001035074Bos taurus acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (ANP32B), mRNA4e-33btcn29652 Bt.7074.1.A1_at
12821:5053_CL1Contig1-B:rNM_018946Homo sapiens N-acetylneuraminic acid synthase (sialic acid synthase) (NANS), mRNAXM_881152PREDICTED: Bos taurus similar to N-acetylneuraminic acid phosphate synthase, transcript variant 2 (LOC540602), mRNA4e-33btcn29649 Bt.3388.1.S1_at
12822:23498_CL1Contig1-B:rNM_018421Homo sapiens TBC1 domain family, member 2 (TBC1D2), mRNAXM_591577PREDICTED: Bos taurus similar to TBC1 domain family member 2 (Prostate antigen recognized and indentified by SEREX) (PARIS-1) (LOC513828), mRNA4e-33btcn31213 Bt.20886.1.A1_at
12823:45360_CL199Contig1-B:rNM_001855Homo sapiens collagen, type XV, alpha 1 (COL15A1), mRNADV795654, btcn55024 Bt.20512.2.S1_at Bt.20512.1.S1_at, Bt.20512.2.S1_at
12828:8253_29217186-A:rNM_173551Homo sapiens ankyrin repeat and sterile alpha motif domain containing 6 (ANKS6), mRNAXM_609325PREDICTED: Bos taurus similar to sterile alpha motif domain containing 6 (LOC530846), mRNA1e-30btcn55026 Bt.21350.1.A1_at
12829:5938_CL1Contig1-B:rNM_000237Homo sapiens lipoprotein lipase (LPL), mRNAXM_616349PREDICTED: Bos taurus lipoprotein lipase, transcript variant 2 (LPL), mRNA4e-33btcn50828, DV779979 Bt.5387.1.S1_at Bt.5387.1.S1_at (1171 bases away)
12830:14216_CL1Contig1-B:fNM_021020Homo sapiens leucine zipper, putative tumor suppressor 1 (LZTS1), mRNAXM_871722PREDICTED: Bos taurus similar to leucine zipper, putative tumor suppressor 1, transcript variant 4 (LOC539634), mRNA4e-33btcn10568 Bt.26208.1.A1_at
12831:243_CL1Contig1-B:rNM_001693Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (ATP6V1B2), mRNANM_176671Bos taurus ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B, isoform 2 (ATP6V1B2), mRNA1e-30CV978345, DV796921, btcn10567 Bt.4086.1.S1_at (679 bases away) Bt.4086.1.S1_at (794 bases away) Bt.4086.1.S1_at
12832:15218_CL1Contig1-B:fNM_001040157Homo sapiens KIAA1712 (KIAA1712), mRNAXM_588191PREDICTED: Bos taurus similar to KIAA1712 (LOC510950), mRNA4e-33AJ819270, btcn10972 Bt.21081.1.A1_a_at (3531 bases away) Bt.26435.1.A1_at, Bt.5480.1.A1_at, Bt.21081.1.A1_a_at
12833:6001_CL2Contig1-B:fNM_001495Homo sapiens GDNF family receptor alpha 2 (GFRA2), mRNANM_001015595Bos taurus similar to GDNF family receptor alpha 2 preproprotein (LOC514036), mRNA4e-33btcn20204.1, btcn48169 Bt.9382.1.S1_at (53144 bases away) Bt.9382.1.S1_at, Bt.21354.1.A1_at
12834:2827_CL1Contig1-B:fNM_002318 (919 bases away)Homo sapiens lysyl oxidase-like 2 (LOXL2), mRNAXM_866029PREDICTED: Bos taurus similar to growth inhibition and differentiation related protein 86 (LOC614496), mRNA1e-30DN523269.1, btcn32878.1 Bt.16000.1.S1_at (133694 bases away) Bt.16000.1.S1_at (133693 bases away)
12835:15248_CL2Contig1-B:rNM_152272Homo sapiens CHMP family, member 7 (CHMP7), mRNAXM_615505PREDICTED: Bos taurus similar to CHMP family, member 7, transcript variant 2 (LOC541288), mRNA4e-33btcn32884, btcn32882 Bt.4082.1.S1_at Bt.4082.1.S1_at
12836:7076_7525661-B:fNM_016612Homo sapiens solute carrier family 25, member 37 (SLC25A37), mRNAbtcn908, AW669147, btcn913, CK975911 Bt.15671.1.S1_at (2042 bases away) Bt.15671.1.S1_at (2036 bases away) Bt.15671.1.S1_at Bt.15671.1.S1_at (2037 bases away)
12837:2947_CL1Contig1-B:fNM_004901Homo sapiens ectonucleoside triphosphate diphosphohydrolase 4 (ENTPD4), mRNAXM_609904PREDICTED: Bos taurus similar to Ectonucleoside triphosphate diphosphohydrolase 4 (NTPDase4) (Uridine-diphosphatase) (UDPase) (Lysosomal apyrase-like protein of 70 kDa) (LOC531411), mRNA4e-33btcn917, CK777324 Bt.25979.1.S1_a_at Bt.25979.1.S1_a_at
12838:26231_61726207-A:fNM_002318Homo sapiens lysyl oxidase-like 2 (LOXL2), mRNAXM_611834PREDICTED: Bos taurus similar to Lysyl oxidase homolog 2 precursor (Lysyl oxidase-like protein 2) (Lysyl oxidase related protein 2) (Lysyl oxidase-related protein WS9-14) (LOC532684), partial mRNA4e-33CR849603 Bt.16000.1.S1_at (80079 bases away)
12839:8592_45461582-A:fNM_022832Homo sapiens ubiquitin specific peptidase 46 (USP46), mRNAXM_594573PREDICTED: Bos taurus similar to ubiquitin specific protease 46 (LOC516420), mRNA4e-33DT844263.58, btcn8145 Bt.28597.1.A1_at, Bt.25057.1.A1_at Bt.28597.1.A1_at, Bt.25057.1.A1_at
1283:41668_CL1Contig1-B:rNM_199346 (11866 bases away)Homo sapiens profilin family, member 4 (PFN4), mRNAXM_864445PREDICTED: Bos taurus hypothetical protein LOC613537 (LOC613537), mRNA4e-33btcn33793 Bt.17025.1.A1_at, Bt.1071.1.S1_a_at
12840:255_CL2Contig1-B:rNM_004925Homo sapiens aquaporin 3 (Gill blood group) (AQP3), mRNAbtcn31979 Bt.23516.1.S1_at (338 bases away)

JT Bovine Oligoblast vs Btau2 -> liftover -> hg17 -> human refseqblast vs btrefIBISS5
Accession(s): senseDescription of lowest accessionAccessionDescriptionE-ValueOverlapping ClustersAffys in this cluster
12841:35492_CL1Contig1-B:rNM_022917Homo sapiens nucleolar protein family 6 (RNA-associated) (NOL6), transcript variant alpha, mRNAbtcn31978 Bt.27242.1.S1_at, Bt.27242.2.S1_at
12843:3101_CL10Contig1-B:rNM_017811Homo sapiens ubiquitin-conjugating enzyme E2R 2 (UBE2R2), mRNAXM_872923PREDICTED: Bos taurus similar to ubiquitin-conjugating enzyme E2R 2, transcript variant 3 (LOC537885), mRNA4e-33btcn31977, AJ815598 Bt.3350.2.S1_at, Bt.11807.1.S1_at, Bt.3350.1.A1_at Bt.3350.2.S1_at, Bt.3350.1.A1_at
12844:11190_CL2Contig1-B:fNM_018449Homo sapiens ubiquitin associated protein 2 (UBAP2), mRNAXM_583043PREDICTED: Bos taurus similar to ubiquitin associated protein 2 isoform 1, transcript variant 3 (LOC506577), mRNA4e-33CN439612, btcn31974 Bt.4327.1.S1_at Bt.4327.1.S1_at
12845:11190_CL3Contig1-B:fNM_018449Homo sapiens ubiquitin associated protein 2 (UBAP2), mRNAXM_583043PREDICTED: Bos taurus similar to ubiquitin associated protein 2 isoform 1, transcript variant 3 (LOC506577), mRNA4e-33btcn31976, AV601567 Bt.4327.1.S1_at (27306 bases away) Bt.3382.1.S1_at (111400 bases away)
12846:14016_CL2Contig1-B:fXM_927203, XM_939691PREDICTED: Homo sapiens early B-cell factor 2, transcript variant 1 (EBF2), mRNAbtcn13816 Bt.29462.1.S1_at (272237 bases away)
12847:41472_CL1Contig1-A:rNM_152562Homo sapiens cell division cycle associated 2 (CDCA2), mRNAXM_593280PREDICTED: Bos taurus similar to cell division cycle associated 2 (LOC515287), mRNA4e-33btcn13807 Bt.29462.1.S1_at
12848:41472_61754981-A:fNM_152562Homo sapiens cell division cycle associated 2 (CDCA2), mRNAXM_593280PREDICTED: Bos taurus similar to cell division cycle associated 2 (LOC515287), mRNA4e-33btcn13812 Bt.29462.1.S1_at (14007 bases away)
12849:41472_13931635-A:fNM_152562Homo sapiens cell division cycle associated 2 (CDCA2), mRNAXM_593280PREDICTED: Bos taurus similar to cell division cycle associated 2 (LOC515287), mRNA4e-33btcn13808 Bt.29462.1.S1_at (26740 bases away)
1284:28621_CL1Contig1-B:rNM_199346Homo sapiens profilin family, member 4 (PFN4), mRNAXM_585717PREDICTED: Bos taurus similar to Profilin-4 (Profilin IV) (LOC508874), mRNA4e-33btcn33794, btcn33793, DT836054 Bt.17025.1.A1_at (7735 bases away) Bt.17025.1.A1_at, Bt.1071.1.S1_a_at Bt.17025.1.A1_at (9157 bases away)
12850:2769_9736691-A:fXM_937822, NM_017634Homo sapiens potassium channel tetramerisation domain containing 9 (KCTD9), mRNAXM_864576PREDICTED: Bos taurus similar to Potassium channel tetramerisation domain containing protein 9, transcript variant 1 (LOC613717), mRNA4e-33btcn13810, AV606318 Bt.16256.2.S1_at (3404 bases away) Bt.16256.2.S1_at (52244 bases away)
12851:24229_15378135-A:fNM_024940Homo sapiens dedicator of cytokinesis 5 (DOCK5), mRNAbtcn13811 Bt.20310.3.S1_at, Bt.20310.2.A1_at, Bt.20310.1.S1_at
12852:7225_162663-A:fNM_001386 (89623 bases away)Homo sapiens dihydropyrimidinase-like 2 (DPYSL2), mRNANM_174498Bos taurus adrenergic, alpha 1A, receptor (ADRA1A), mRNA4e-33J05426 Bt.374.1.S1_at
12853:1777_27759908-A:fNM_001386Homo sapiens dihydropyrimidinase-like 2 (DPYSL2), mRNADY155825, btcn48645 Bt.5224.1.S1_at, Bt.5224.2.S1_at Bt.5224.1.S1_at, Bt.5224.2.S1_at, Bt.20485.1.S1_at
12854:1777_CL6Contig1-B:r
12855:15591_CL1Contig2-B:fNM_015397Homo sapiens WD repeat domain 40A (WDR40A), mRNAXM_603508PREDICTED: Bos taurus similar to WD repeat domain 40A, transcript variant 1 (LOC525161), mRNA4e-33DY075577, btcn16132, btcn16130 Bt.18924.1.S1_at (690 bases away) Bt.18924.1.S1_at Bt.3382.1.S1_at, Bt.22440.1.S1_at, Bt.18924.1.S1_at
12856:45360_CL306Contig1-A:fXM_601217PREDICTED: Bos taurus similar to PHD finger protein 3 (LOC522928), mRNA4e-33
12857:45360_CL234Contig1-A:fNM_015153Homo sapiens PHD finger protein 3 (PHF3), mRNAXM_601217PREDICTED: Bos taurus similar to PHD finger protein 3 (LOC522928), mRNA4e-33btcn8617 Bt.20639.1.A1_at (15171 bases away)
12858:45360_CL867Contig1-A:rNM_015153 (9098 bases away)Homo sapiens PHD finger protein 3 (PHF3), mRNAbtcn8619 Bt.20639.1.A1_at (26694 bases away)
12859:11091_10166217-A:fXM_613492PREDICTED: Bos taurus similar to Brain-specific angiogenesis inhibitor 3 precursor (LOC533925), mRNA4e-33
1285:45360_CL200Contig2-A:fNM_004881, NM_147184Homo sapiens tumor protein p53 inducible protein 3 (TP53I3), transcript variant 1, mRNAXM_585718PREDICTED: Bos taurus similar to tumor protein p53 inducible protein 3, transcript variant 1 (LOC508875), mRNA4e-33btcn33796, btcn33793, CB223010, btcn33795 Bt.1071.1.S1_a_at Bt.17025.1.A1_at, Bt.1071.1.S1_a_at Bt.1071.1.S1_a_at Bt.17025.1.A1_at,